BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005760
(678 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 153/298 (51%), Gaps = 19/298 (6%)
Query: 380 RMFSYLELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFN---LQYGRVFKSFD 436
+ FS EL A+D FS N++GRG FG V+K RL DG VA+K Q G + F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL--QFQ 83
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLN 493
E EM+ HRN++++ C + LV YM +GS+ L S LD +R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
I + A L YLH ++IH D+K +N+LLD+ A + DFG+AKL+ +D +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXA 202
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIF---NGEMTLKHWVND 610
TIG++APEY G+ S DV+ +G+ML+E T ++ D + ++ L WV
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 611 WLPISTKE-IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
L E +VD +L N+ K++ V + VA+ CT SP +R E+V L
Sbjct: 263 LLKEKKLEALVDVDLQG----NY--KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 151/298 (50%), Gaps = 19/298 (6%)
Query: 380 RMFSYLELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFN---LQYGRVFKSFD 436
+ FS EL A+D F N++GRG FG V+K RL DG VA+K Q G + F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL--QFQ 75
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLN 493
E EM+ HRN++++ C + LV YM +GS+ L S LD +R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
I + A L YLH ++IH D+K +N+LLD+ A + DFG+AKL+ +D +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXA 194
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIF---NGEMTLKHWVND 610
IG++APEY G+ S DV+ +G+ML+E T ++ D + ++ L WV
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 611 WLPISTKE-IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
L E +VD +L N+ K++ V + VA+ CT SP +R E+V L
Sbjct: 255 LLKEKKLEALVDVDLQG----NY--KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 159/299 (53%), Gaps = 17/299 (5%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS 444
++L AT+ F LIG G FG V+K L DG +VA+K + + + F+ E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN---YILDIYQRLNIMIDVASA 501
RH +++ +I C L+ +YM +G+L+++L+ S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
L YLH + +IH D+K N+LLD+N V ++DFGI+K T DQ+ + T+GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 562 APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMT-LKHW-VNDWLPISTKEI 619
PEY +GR++ DVYSFG++L E + + EM L W V ++I
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 620 VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL---LKIRDSLL 675
VDPNL + + + + + A++C S E R + +++ KL L++++S++
Sbjct: 269 VDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 17/299 (5%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS 444
++L AT+ F LIG G FG V+K L DG +VA+K + + + F+ E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN---YILDIYQRLNIMIDVASA 501
RH +++ +I C L+ +YM +G+L+++L+ S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
L YLH + +IH D+K N+LLD+N V ++DFGI+K T Q+ + T+GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 562 APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMT-LKHW-VNDWLPISTKEI 619
PEY +GR++ DVYSFG++L E + + EM L W V ++I
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 620 VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL---LKIRDSLL 675
VDPNL + + + + + A++C S E R + +++ KL L++++S++
Sbjct: 269 VDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 51/289 (17%)
Query: 400 IGRGSFGSVFKARL------GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+G G+FG VF A D M VA+K K F E E++ +++H +I+K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYI-------------LDIYQRLNIMIDV 498
C + + +V EYM HG L K+L H + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 499 ASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATI 558
AS + YL S +H DL N L+ N++ + DFG+++ + D + T+ I
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 559 GYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 618
+M PE + + DV+SFG++L E FT K W +S E
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK----------------QPWFQLSNTE 243
Query: 619 IVD----PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
+++ +L R + C V++V + C P+QR+N KEI
Sbjct: 244 VIECITQGRVLERPRV-------CPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 17/227 (7%)
Query: 382 FSYLELCRATDGFSEN------NLIGRGSFGSVFKARLGDGMEVAMK----VFNLQYGRV 431
FS+ EL T+ F E N +G G FG V+K + + VA+K + ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 432 FKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI--LDIY 489
+ FD E ++M +H N+++++ S+ + LV YMP+GSL L + L +
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549
R I A+ + +LH + IH D+K +N+LLD+ A +SDFG+A+ + Q+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDE 596
+ ++ + T YMAPE G ++ D+YSFG++L+E T DE
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 17/227 (7%)
Query: 382 FSYLELCRATDGFSEN------NLIGRGSFGSVFKARLGDGMEVAMK----VFNLQYGRV 431
FS+ EL T+ F E N +G G FG V+K + + VA+K + ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 432 FKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI--LDIY 489
+ FD E ++M +H N+++++ S+ + LV YMP+GSL L + L +
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549
R I A+ + +LH + IH D+K +N+LLD+ A +SDFG+A+ + Q+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDE 596
+ + + T YMAPE G ++ D+YSFG++L+E T DE
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 382 FSYLELCRATDGFSEN------NLIGRGSFGSVFKARLGDGMEVAMK----VFNLQYGRV 431
FS+ EL T+ F E N +G G FG V+K + + VA+K + ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 432 FKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI--LDIY 489
+ FD E ++M +H N+++++ S+ + LV YMP+GSL L + L +
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549
R I A+ + +LH + IH D+K +N+LLD+ A +SDFG+A+ + Q
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDE 596
+ + + T YMAPE G ++ D+YSFG++L+E T DE
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG GSFG+V +A G +VA+K+ Q + F E +MK +RH NI+ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ ++V EY+ GSL + LH S LD +RL++ DVA + YLH + ++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DLK N+L+D + DFG+++L + T +MAPE ++ +
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 576 DVYSFGIMLMETFTRKKP 593
DVYSFG++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 110/199 (55%), Gaps = 10/199 (5%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG GSFG+V +A G +VA+K+ Q + F E +MK +RH NI+ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ ++V EY+ GSL + LH S LD +RL++ DVA + YLH + ++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA-TIGYMAPEYGKEGRVSAN 574
+LK N+L+D + DFG+++L + + + +++ A T +MAPE ++ +
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 575 GDVYSFGIMLMETFTRKKP 593
DVYSFG++L E T ++P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 153 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 209
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 269
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 270 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 313
Query: 664 VTKLLKIRDSL 674
++ +IRD +
Sbjct: 314 ALRVDQIRDQM 324
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 127 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 243
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 244 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 287
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 288 ALRVDQIRDNM 298
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 125 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 242 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 285
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 286 ALRVDQIRDNM 296
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 126 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 242
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 243 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 286
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 287 ALRVDQIRDNM 297
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 122 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 239 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 282
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 283 ALRVDQIRDNM 293
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 121 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 237
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 238 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 281
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 282 ALRVDQIRDNM 292
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 129 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 185
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 245
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 246 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 289
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 290 ALRVDQIRDNM 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 44/306 (14%)
Query: 394 FSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVECEMMK 443
F E +L +G+G+FGSV R L D G VA+K + F+ E E++K
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 444 SIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
S++H NI+K C + + L++EY+P+GSL YL +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTLATIGY 560
+EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++ + I +
Sbjct: 145 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 561 MAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTLKHWVN 609
APE E + S DV+SFG++L E FT K P E G+M + H +
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI- 260
Query: 610 DWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
E++ N L R D C ++ + EC + QR + +++ ++
Sbjct: 261 --------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 305
Query: 669 KIRDSL 674
+IRD++
Sbjct: 306 QIRDNM 311
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 44/306 (14%)
Query: 394 FSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVECEMMK 443
F E +L +G+G+FGSV R L D G VA+K + F+ E E++K
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 444 SIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
S++H NI+K C + + L++EY+P+GSL YL +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTLATIGY 560
+EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++ + I +
Sbjct: 145 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 561 MAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTLKHWVN 609
APE E + S DV+SFG++L E FT K P E G+M + H +
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI- 260
Query: 610 DWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
E++ N L R D C ++ + EC + QR + +++ ++
Sbjct: 261 --------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 305
Query: 669 KIRDSL 674
+IRD++
Sbjct: 306 QIRDNM 311
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 67
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 128 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 244
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 245 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 288
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 289 ALRVDQIRDNM 299
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 44/306 (14%)
Query: 394 FSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVECEMMK 443
F E +L +G+G+FGSV R L D G VA+K + F+ E E++K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 444 SIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
S++H NI+K C + + L++EY+P+GSL YL +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTLATIGY 560
+EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++ + I +
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTLKHWVN 609
APE E + S DV+SFG++L E FT K P E G+M + H +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI- 242
Query: 610 DWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
E++ N L R D C ++ + EC + QR + +++ ++
Sbjct: 243 --------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287
Query: 669 KIRDSL 674
+IRD++
Sbjct: 288 QIRDNM 293
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 147/311 (47%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL + +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 125 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 242 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 285
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 286 ALRVDQIRDNM 296
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 144/306 (47%), Gaps = 44/306 (14%)
Query: 394 FSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVECEMMK 443
F E +L +G+G+FGSV R L D G VA+K + F+ E E++K
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 444 SIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
S++H NI+K C + + L++EY+P+GSL YL +D + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTLATIGY 560
+EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++ + I +
Sbjct: 125 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 561 MAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTLKHWVN 609
APE E + S DV+SFG++L E FT K P E G+M + H +
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI- 240
Query: 610 DWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
E++ N L R D C ++ + EC + QR + +++ ++
Sbjct: 241 --------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 285
Query: 669 KIRDSL 674
+IRD +
Sbjct: 286 QIRDQM 291
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
++GRG+FG V KA+ +VA+K + R K+F VE + + H NI+K+ +
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM---IDVASALEYLHFGYSAQV 513
C N LV+EY GSL LH + L Y + M + + + YLH +
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 514 IHCDLKPSNVLL-DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DLKP N+LL V + DFG A D T T + +MAPE + S
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 573 ANGDVYSFGIMLMETFTRKKPTDEI 597
DV+S+GI+L E TR+KP DEI
Sbjct: 183 EKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
++GRG+FG V KA+ +VA+K + R K+F VE + + H NI+K+ +
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM---IDVASALEYLHFGYSAQV 513
C N LV+EY GSL LH + L Y + M + + + YLH +
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 514 IHCDLKPSNVLL-DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DLKP N+LL V + DFG A D T T + +MAPE + S
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 573 ANGDVYSFGIMLMETFTRKKPTDEI 597
DV+S+GI+L E TR+KP DEI
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 147/311 (47%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++E++P+GSL +YL +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++
Sbjct: 125 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 242 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 285
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 286 ALRVDQIRDNM 296
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 44/306 (14%)
Query: 394 FSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVECEMMK 443
F E +L +G+G+FGSV R L D G VA+K + F+ E E++K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 444 SIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
S++H NI+K C + + L++EY+P+GSL YL +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTLATIGY 560
+EYL + + IH DL N+L+++ + DFG+ K+L ++ + ++ + I +
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTLKHWVN 609
APE E + S DV+SFG++L E FT K P E G+M + H +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI- 242
Query: 610 DWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
E++ N L R D C ++ + EC + QR + +++ ++
Sbjct: 243 --------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287
Query: 669 KIRDSL 674
+IRD++
Sbjct: 288 QIRDNM 293
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 389 RATDGFSENNL-----IGRGSFGSVFKAR---LGD--GMEVAMKVFNLQYGRVFKSFDVE 438
R F E +L +G+G+FGSV R L D G VA+K + F+ E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E++KS++H NI+K C + + L++EY+P+GSL YL +D + L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTL 555
+ +EYL + + IH +L N+L+++ + DFG+ K+L ++ + ++
Sbjct: 123 QICKGMEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 179
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT----RKKPTDEIF-------NGEMTL 604
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 180 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 239
Query: 605 KHWVNDWLPISTKEIVDPN-LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 663
H + E++ N L R D C ++ + EC + QR + +++
Sbjct: 240 FHLI---------ELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 283
Query: 664 VTKLLKIRDSL 674
++ +IRD++
Sbjct: 284 ALRVDQIRDNM 294
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 28/278 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 133
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 579
N L+ +N V +SDFG+ + + +DQ T T T + + +PE R S+ DV+S
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 580 FGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDINFVAKEQ 637
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 193 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 233
Query: 638 CVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 234 --THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 28/278 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 128
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 579
N L+ +N V +SDFG+ + + +DQ T T T + + +PE R S+ DV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 580 FGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDINFVAKEQ 637
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 228
Query: 638 CVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 229 --THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 28/278 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 130
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 579
N L+ +N V +SDFG+ + + +DQ T T T + + +PE R S+ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 580 FGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDINFVAKEQ 637
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 230
Query: 638 CVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 231 --THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 124/285 (43%), Gaps = 46/285 (16%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKVISSC 457
IGRG+FG VF RL D VA+K K+ F E ++K H NI+++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
+ ++ +V+E + G +L + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT----LATIGYMAPEYGKEGRVSA 573
L N L+ + V +SDFG ++RE+ + + + + APE GR S+
Sbjct: 239 LAARNCLVTEKNVLKISDFG----MSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFV 633
DV+SFGI+L ETF S PNL +++ FV
Sbjct: 295 ESDVWSFGILLWETF--------------------------SLGASPYPNLSNQQTREFV 328
Query: 634 AK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671
K E C VF + +C P QR + I +L IR
Sbjct: 329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 400 IGRGSFGSVFKARL------GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+G G+FG VF A D M VA+K + F E E++ ++H++I++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHS--------------SNYILDIYQRLNIMIDVA 499
C+ +V EYM HG L ++L S + L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 500 SALEYL---HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+ + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 616
I +M PE + + DV+SFG++L E FT K W +S
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------------QPWYQLSN 266
Query: 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
E +D RE C V+ + C P+QR + K++ +L
Sbjct: 267 TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 30/279 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKVISSCS 458
IG G FG V + +VA+K ++ G + + F E E+M + H ++++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIK--TIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDL 149
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L+ +N V +SDFG+ + + +DQ T T T + + +PE R S+ DV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 579 SFGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDINFVAKE 636
SFG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS---------- 250
Query: 637 QCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 251 ---THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 34/291 (11%)
Query: 395 SENNLIGRGSFGSVFKARLGDG---MEVAMKVFNLQYGRVFKS---FDVECEMMKSIRHR 448
+ +IG G FG V+K L EV + + L+ G K F E +M H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NII++ S + ++ EYM +G+L+K+L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA-- 164
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYGK 567
+ +H DL N+L++ N+V +SDFG++++L + ++T T I + APE
Sbjct: 165 -NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 568 EGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626
+ ++ DV+SFGI++ E T ++P E+ N E+ +ND + T
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA--INDGFRLPT---------- 271
Query: 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT---KLLKIRDSL 674
C S ++ + M+C + +R +IV+ KL++ DSL
Sbjct: 272 --------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 124/285 (43%), Gaps = 46/285 (16%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKVISSC 457
IGRG+FG VF RL D VA+K K+ F E ++K H NI+++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
+ ++ +V+E + G +L + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT----LATIGYMAPEYGKEGRVSA 573
L N L+ + V +SDFG ++RE+ + + + + APE GR S+
Sbjct: 239 LAARNCLVTEKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFV 633
DV+SFGI+L ETF S PNL +++ FV
Sbjct: 295 ESDVWSFGILLWETF--------------------------SLGASPYPNLSNQQTREFV 328
Query: 634 AK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671
K E C VF + +C P QR + I +L IR
Sbjct: 329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 28/278 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 131
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 579
N L+ +N V +SDFG+ + + +DQ T T T + + +PE R S+ DV+S
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 580 FGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDINFVAKEQ 637
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 191 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 231
Query: 638 CVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 232 --THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 28/278 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLA 130
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 579
N L+ +N V +SDFG+ + + +DQ T T T + + +PE R S+ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 580 FGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDINFVAKEQ 637
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 230
Query: 638 CVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+ V+ + C E PE R ++ +L I S L
Sbjct: 231 --THVYQIMNHCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 400 IGRGSFGSVFKARL------GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+G G+FG VF A D M VA+K + F E E++ ++H++I++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHS--------------SNYILDIYQRLNIMIDVA 499
C+ +V EYM HG L ++L S + L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 500 SALEYL---HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+ + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 616
I +M PE + + DV+SFG++L E FT K W +S
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------------QPWYQLSN 237
Query: 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
E +D RE C V+ + C P+QR + K++ +L
Sbjct: 238 TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 400 IGRGSFGSVFKARL------GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+G G+FG VF A D M VA+K + F E E++ ++H++I++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHS--------------SNYILDIYQRLNIMIDVA 499
C+ +V EYM HG L ++L S + L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 500 SALEYL---HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+ + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 616
I +M PE + + DV+SFG++L E FT K W +S
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------------QPWYQLSN 243
Query: 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
E +D RE C V+ + C P+QR + K++ +L
Sbjct: 244 TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 382 FSYLELCRATDGFSEN------NLIGRGSFGSVFKARLGDGMEVAMK----VFNLQYGRV 431
FS+ EL T+ F E N G G FG V+K + + VA+K + ++ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 432 FKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI--LDIY 489
+ FD E ++ +H N+++++ S+ + LV Y P+GSL L + L +
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549
R I A+ + +LH + IH D+K +N+LLD+ A +SDFG+A+ + Q
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDE 596
++ + T Y APE G ++ D+YSFG++L+E T DE
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 40/286 (13%)
Query: 400 IGRGSFGSVFKARL------GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+G G+FG VF A D + VA+K K F E E++ +++H +I+K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYIL----------DIYQRLNIMIDVASA 501
C + +V EYM HG L K+L H + +L Q L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YL S +H DL N L+ +N++ + DFG+++ + D + T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 562 APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621
PE + + DV+S G++L E FT K W +S E+++
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGK----------------QPWYQLSNNEVIE 241
Query: 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
R C V+ + + C P R N K I T L
Sbjct: 242 CITQGR---VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLL 284
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 92
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 250
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 251 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 85
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 142
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 243
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 244 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 111
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 168
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 269
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 270 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 91
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 148
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 249
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 250 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 112
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 169
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 270
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 271 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 251
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 88
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 145
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 246
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 247 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 92
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 250
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 251 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 90
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 147
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 248
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 249 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
IG GSFG+V+K + GD VA+K+ + F++F E +++ RH NI+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
+ + A+V ++ SL K+LH ++Q ++I A ++YLH + +IH
Sbjct: 101 MTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSA 573
D+K +N+ L + + + DFG+A + +R S Q ++ +MAPE + S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTL 604
DVYS+GI+L E T + P I N + +
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQII 247
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 251
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 459 NEEFKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 74 EEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 129
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 130 LRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 189 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 222
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 223 RMPCPPECPESLHDLMCQCWRKEPEER 249
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V+EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 199 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 232
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 459 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 333 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 388
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 389 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 448 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 481
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 482 RMPCPPECPESLHDLMCQCWRKEPEER 508
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 459 NEEFKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 77 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 132
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 133 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 192 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 225
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 226 RMPCPPECPESLHDLMCQCWRKEPEER 252
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V+EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 199 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 232
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 129/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK IRH ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 199 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 232
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 459 NEEFKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 365 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 398
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 399 RMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 152
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 209
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 310
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 311 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 459 NEEFKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 365 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 398
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 399 RMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 251
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 98
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 155
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 256
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 257 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 94
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 252
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 253 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 94
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 252
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 253 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 251
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 397 NNLIGRGSFGSVFKARL----GDGMEVAMKVFN--LQYGRVFKSFDVECEMMKSIRHRNI 450
N +IGRG FG V+ L G + A+K N G V F E +MK H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 91
Query: 451 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 148
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGK 567
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627
+ + DV+SFG++L E TR P P D +
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 249
Query: 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 250 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 17/194 (8%)
Query: 400 IGRGSFGSVFKARLGD--GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG+G FG V LGD G +VA+K ++ ++F E +M +RH N+++++
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 458 SNEEFKA-LVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ +V EYM GSL YL S +L L +DV A+EYL +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 125
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DL NVL+ ++ VA +SDFG LT+E ST T L + + APE +E + S
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLP-VKWTAPEALREKKFSTKS 180
Query: 576 DVYSFGIMLMETFT 589
DV+SFGI+L E ++
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 459 NEEFKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 196 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 229
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 230 RMPCPPECPESLHDLMCQCWRKEPEER 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 73 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 128
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 129 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 188 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 221
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 222 RMPCPPECPESLHDLMCQCWRKDPEER 248
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 17/194 (8%)
Query: 400 IGRGSFGSVFKARLGD--GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG+G FG V LGD G +VA+K ++ ++F E +M +RH N+++++
Sbjct: 29 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 458 SNEEFK-ALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ +V EYM GSL YL S +L L +DV A+EYL +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 140
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DL NVL+ ++ VA +SDFG LT+E ST T L + + APE +E + S
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLP-VKWTAPEALREKKFSTKS 195
Query: 576 DVYSFGIMLMETFT 589
DV+SFGI+L E ++
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 75 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 130
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 131 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 190 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 223
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 224 RMPCPPECPESLHDLMCQCWRKDPEER 250
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 199 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 232
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 199 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 232
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 400 IGRGSFGSVFKARLGD--GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG+G FG V LGD G +VA+K ++ ++F E +M +RH N+++++
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 458 SNEEFKA-LVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ +V EYM GSL YL S +L L +DV A+EYL +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 131
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DL NVL+ ++ VA +SDFG LT+E ST T L + + APE +E S
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLP-VKWTAPEALREAAFSTKS 186
Query: 576 DVYSFGIMLMETFT 589
DV+SFGI+L E ++
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 459 NEEFKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 196 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 229
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 230 RMPCPPECPESLHDLMCQCWRKEPEER 256
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 459 NEEFKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 365 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 398
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 399 RMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 17/194 (8%)
Query: 400 IGRGSFGSVFKARLGD--GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG+G FG V LGD G +VA+K ++ ++F E +M +RH N+++++
Sbjct: 201 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 458 SNEEFK-ALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ +V EYM GSL YL S +L L +DV A+EYL +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 312
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DL NVL+ ++ VA +SDFG LT+E ST T L + + APE +E + S
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLP-VKWTAPEALREKKFSTKS 367
Query: 576 DVYSFGIMLMETFT 589
DV+SFGI+L E ++
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V+EYM G L +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 199 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 232
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 251 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 306
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+ +L+ +++ T + I + APE GR + DV
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 366 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 399
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 400 RMPCPPECPESLHDLMCQCWRKDPEER 426
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V + +VA+K+ ++ G + + F E + M + H ++K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKM--IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
E +V EY+ +G L YL S L+ Q L + DV + +L S Q IH DL
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDL 130
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L+D ++ +SDFG+ + + +DQ T + + APE + S+ DV+
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 579 SFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQ 637
+FGI++ E F+ K P D N E+ LK + P+L S
Sbjct: 190 AFGILMWEVFSLGKMPYDLYTNSEVVLK-------VSQGHRLYRPHLAS----------- 231
Query: 638 CVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672
++ + C E PE+R +++++ + +R+
Sbjct: 232 --DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 111/212 (52%), Gaps = 13/212 (6%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISS 456
IG GSFG+V+K + GD VA+K+ N+ + ++F E +++ RH NI+ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
+ + A+V ++ SL +LH+S ++ + ++I A ++YLH + +IH
Sbjct: 77 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 132
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSA 573
DLK +N+ L ++ + DFG+A + +R S Q +I +MAPE + S
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
DVY+FGI+L E T + P I N + ++
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 224
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 140 LAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 199 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 232
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 148/313 (47%), Gaps = 37/313 (11%)
Query: 373 MPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQY 428
+P + Q + + + AT+ S + ++G G FG V RL + VA+K + Y
Sbjct: 15 VPRGSTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 73
Query: 429 G-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ + F E +M H NII++ + + +V EYM +GSL+ +L +
Sbjct: 74 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 133
Query: 488 IYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
+ Q + ++ +AS ++YL GY +H DL N+L++ N+V +SDFG++++L +
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 547 QSTIQTQTLAT-IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTL 604
++ T+ I + +PE + ++ DV+S+GI+L E + ++P E+ N ++
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI- 248
Query: 605 KHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664
+ VD E C + ++ + ++C + R ++IV
Sbjct: 249 -------------KAVD------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 289
Query: 665 TKLLKIRDSLLRN 677
+ I D L+RN
Sbjct: 290 S----ILDKLIRN 298
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 42/267 (15%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G+G FG V+ VA+K L+ G + ++F E ++MK +RH ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM G L +L L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ +N+V ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 578 YSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK-- 635
+SFGI+L E T+ + + P +++RE ++ V +
Sbjct: 199 WSFGILLTELTTKGR--------------------------VPYPGMVNREVLDQVERGY 232
Query: 636 -----EQCVSFVFNVAMECTVESPEQR 657
+C + ++ +C + PE+R
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR 448
S + ++G G FG V RL + VA+K + Y + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HF 507
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYG 566
GY +H DL N+L++ N+V +SDFG+A++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 567 KEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 264
Query: 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG GSFG+V+K + + V M + ++F E +++ RH NI+ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ A+V ++ SL +LH ++ + ++I A ++YLH + +IH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSANGD 576
+N+ L +++ + DFG+A + +R S Q +I +MAPE + + S D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 577 VYSFGIMLMETFTRKKPTDEIFNGEMTL 604
VY+FGI+L E T + P I N + +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG GSFG+V+K + + V M + ++F E +++ RH NI+ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ A+V ++ SL +LH ++ + ++I A ++YLH + +IH DLK
Sbjct: 81 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 136
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSANGD 576
+N+ L +++ + DFG+A + +R S Q +I +MAPE + + S D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 577 VYSFGIMLMETFTRKKPTDEIFNGEMTL 604
VY+FGI+L E T + P I N + +
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRDQII 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG GSFG+V+K + + V M + ++F E +++ RH NI+ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ A+V ++ SL +LH ++ + ++I A ++YLH + +IH DLK
Sbjct: 81 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 136
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSANGD 576
+N+ L +++ + DFG+A + +R S Q +I +MAPE + + S D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 577 VYSFGIMLMETFTRKKPTDEIFNGEMTL 604
VY+FGI+L E T + P I N + +
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRDQII 224
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG GSFG+V+K + + V M + ++F E +++ RH NI+ + +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ A+V ++ SL +LH ++ + ++I A ++YLH + +IH DLK
Sbjct: 78 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 133
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSANGD 576
+N+ L +++ + DFG+A + +R S Q +I +MAPE + + S D
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 577 VYSFGIMLMETFTRKKPTDEIFNGEMTL 604
VY+FGI+L E T + P I N + +
Sbjct: 194 VYAFGIVLYELMTGQLPYSNINNRDQII 221
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISS 456
IG GSFG+V+K + GD VA+K+ N+ + ++F E +++ RH NI+ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
+ + A+V ++ SL +LH+S ++ + ++I A ++YLH + +IH
Sbjct: 89 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSA 573
DLK +N+ L ++ + DFG+A +R S Q +I +MAPE + S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
DVY+FGI+L E T + P I N + ++
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 236
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 148/316 (46%), Gaps = 37/316 (11%)
Query: 370 DANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFN 425
D + + Q + + + AT+ S + ++G G FG V RL + VA+K
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 426 LQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY 484
+ Y + + F E +M H NII++ + + +V EYM +GSL+ +L +
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 485 ILDIYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543
+ Q + ++ +AS ++YL GY +H DL N+L++ N+V +SDFG++++L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 544 REDQSTIQTQ-TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGE 601
+ ++ T+ I + +PE + ++ DV+S+GI+L E + ++P E+ N +
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 602 MTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAK 661
+ + VD E C + ++ + ++C + R +
Sbjct: 259 VI--------------KAVD------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 662 EIVTKLLKIRDSLLRN 677
+IV+ I D L+RN
Sbjct: 299 QIVS----ILDKLIRN 310
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG GSFG+V+K + + V M + ++F E +++ RH NI+ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ A+V ++ SL +LH ++ + ++I A ++YLH + +IH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSANGD 576
+N+ L +++ + DFG+A + +R S Q +I +MAPE + + S D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 577 VYSFGIMLMETFTRKKPTDEIFNGEMTL 604
VY+FGI+L E T + P I N + +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 148/316 (46%), Gaps = 37/316 (11%)
Query: 370 DANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFN 425
D + + Q + + + AT+ S + ++G G FG V RL + VA+K
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 426 LQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY 484
+ Y + + F E +M H NII++ + + +V EYM +GSL+ +L +
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 485 ILDIYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543
+ Q + ++ +AS ++YL GY +H DL N+L++ N+V +SDFG++++L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 544 REDQSTIQTQ-TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGE 601
+ ++ T+ I + +PE + ++ DV+S+GI+L E + ++P E+ N +
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 602 MTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAK 661
+ + VD E C + ++ + ++C + R +
Sbjct: 259 VI--------------KAVD------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 662 EIVTKLLKIRDSLLRN 677
+IV+ I D L+RN
Sbjct: 299 QIVS----ILDKLIRN 310
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISS 456
IG GSFG+V+K + GD VA+K+ N+ + ++F E +++ RH NI+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSA 573
DLK +N+ L +++ + DFG+A + +R S Q +I +MAPE + + S
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTL 604
DVY+FGI+L E T + P I N + +
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQII 247
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG GSFG+V+K + + V M + ++F E +++ RH NI+ + +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ A+V ++ SL +LH ++ + ++I A ++YLH + +IH DLK
Sbjct: 103 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 158
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSANGD 576
+N+ L +++ + DFG+A + +R S Q +I +MAPE + + S D
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 577 VYSFGIMLMETFTRKKPTDEIFNGEMTL 604
VY+FGI+L E T + P I N + +
Sbjct: 219 VYAFGIVLYELMTGQLPYSNINNRDQII 246
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 148/316 (46%), Gaps = 37/316 (11%)
Query: 370 DANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFN 425
D + + Q + + + AT+ S + ++G G FG V RL + VA+K
Sbjct: 22 DPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 80
Query: 426 LQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY 484
+ Y + + F E +M H NII++ + + +V EYM +GSL+ +L +
Sbjct: 81 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 140
Query: 485 ILDIYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543
+ Q + ++ +AS ++YL GY +H DL N+L++ N+V +SDFG++++L
Sbjct: 141 QFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLE 196
Query: 544 REDQSTIQTQ-TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGE 601
+ ++ T+ I + +PE + ++ DV+S+GI+L E + ++P E+ N +
Sbjct: 197 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 256
Query: 602 MTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAK 661
+ + VD E C + ++ + ++C + R +
Sbjct: 257 VI--------------KAVD------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 296
Query: 662 EIVTKLLKIRDSLLRN 677
+IV+ I D L+RN
Sbjct: 297 QIVS----ILDKLIRN 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR 448
S + ++G G FG V RL + VA+K + Y + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HF 507
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYG 566
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 567 KEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 264
Query: 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR 448
S + ++G G FG V RL + VA+K + Y + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HF 507
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYG 566
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 567 KEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 264
Query: 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ ++ EYM +G L YL + Q L + DV A+EYL S Q +H DL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L++D V +SDFG+++ + +D+ T + + + PE + S+ D++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVL-DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQG------LRLYRPHLASEK---------- 249
Query: 639 VSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672
V+ + C E ++R K +++ +L + D
Sbjct: 250 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISS 456
IG GSFG+V+K + GD VA+K+ N+ + ++F E +++ RH NI+ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
+ + A+V ++ SL +LH+S ++ + ++I A ++YLH + +IH
Sbjct: 89 STAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSA 573
DLK +N+ L ++ + DFG+A +R S Q +I +MAPE + S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
DVY+FGI+L E T + P I N + ++
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 236
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR 448
S + ++G G FG V RL + VA+K + Y + + F E +M H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HF 507
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT-IGYMAPEYG 566
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 138 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 567 KEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 235
Query: 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 236 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 281
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR 448
S + ++G G FG V RL + VA+K + Y + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HF 507
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYG 566
GY +H DL N+L++ N+V +SDFG+ ++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 567 KEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 264
Query: 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ ++ EYM +G L YL + Q L + DV A+EYL S Q +H DL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L++D V +SDFG+++ + +D+ T + + + PE + S+ D++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQG------LRLYRPHLASEK---------- 249
Query: 639 VSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672
V+ + C E ++R K +++ +L + D
Sbjct: 250 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG GSFG+V+K + + V M + ++F E +++ RH NI+ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ A+V ++ SL +LH ++ + ++I A ++YLH + +IH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSANGD 576
+N+ L +++ + DFG+A +R S Q +I +MAPE + + S D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 577 VYSFGIMLMETFTRKKPTDEIFNGEMTL 604
VY+FGI+L E T + P I N + +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG GSFG+V+K + + V M + ++F E +++ RH NI+ + +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
+ A+V ++ SL +LH ++ + ++I A ++YLH + +IH DLK
Sbjct: 96 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 151
Query: 520 PSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSANGD 576
+N+ L +++ + DFG+A +R S Q +I +MAPE + + S D
Sbjct: 152 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 211
Query: 577 VYSFGIMLMETFTRKKPTDEIFNGEMTL 604
VY+FGI+L E T + P I N + +
Sbjct: 212 VYAFGIVLYELMTGQLPYSNINNRDQII 239
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ ++ EYM +G L YL + Q L + DV A+EYL S Q +H DL
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 137
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L++D V +SDFG+++ + +D+ T + + + PE + S+ D++
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSETAEH------IAQGLRLYRPHLASEK---------- 240
Query: 639 VSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672
V+ + C E ++R K +++ +L + D
Sbjct: 241 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 39/251 (15%)
Query: 101 SLEYFEMAYC----NVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTXXXXXXXXXXXXE 156
+L Y Y N+ G IP I LT L +Y+ ++G+IP
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133
Query: 157 NNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASL-RILLLGSNELTS-IPLT 214
N L G++P SI L + GN++SG+IP+ + + + L + + N LT IP T
Sbjct: 134 YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193
Query: 215 FWNLKDILYLNFSSNFFTG--------------------PLPLEIGNLKIAR-IDSCDXX 253
F NL ++ +++ S N G L ++G + +++ ++ D
Sbjct: 194 FANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLR 252
Query: 254 XXXXXXXXXXXXXGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELL 313
G +P L +L +L LN+SFN L GEIP+GG+ F ++ N+ L
Sbjct: 253 NNRIY--------GTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCL 304
Query: 314 CGSPNLRVPPC 324
CGSP +P C
Sbjct: 305 CGSP---LPAC 312
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 78/202 (38%), Gaps = 8/202 (3%)
Query: 7 NNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYXXXXXXXXXX 66
NN G IP I ++L L ++ + SG IP+ ++ L L S N
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN-----ALSGTL 141
Query: 67 XXXXXNCKSLTLISFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNL 126
+ +L I+F N + G +P S G+ S ++ ++G IP NL NL
Sbjct: 142 PPSISSLPNLVGITFDGNRISGAIPD-SYGSFSKLFTSMTISRNRLTGKIPPTFANL-NL 199
Query: 127 TIIYLGGNKLNGSIPSTXXXXXXXXXXXXENNKLEGSIPDSICHSDELYKLELGGNKLSG 186
+ L N L G N L + + S L L+L N++ G
Sbjct: 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYG 258
Query: 187 SIPECFNNLASLRILLLGSNEL 208
++P+ L L L + N L
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNL 280
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 13/211 (6%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISS 456
IG GSFG+V+K + GD VA+K+ N+ + ++F E +++ RH NI+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK---EGRVSA 573
DLK +N+ L +++ + DFG+A +R S Q +I +MAPE + + S
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTL 604
DVY+FGI+L E T + P I N + +
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQII 247
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 147/373 (39%), Gaps = 56/373 (15%)
Query: 2 LQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYXXXXX 61
L + N F+G IP + N S+L L LS N SG IP++ G+L L+ L+L N
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 62 XXXXXXXXX-------------------XNCKSLTLISFSNNPLDGILPKTSVGNLSHSL 102
NC +L IS SNN L G +PK +G L +L
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW-IGRL-ENL 513
Query: 103 EYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTXXXXXXXXXXXXENNKLEG 162
+++ + SG IP E+G+ +L + L N NG+IP+ K
Sbjct: 514 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 573
Query: 163 SIPDSI----CH------------SDELYKLE------LGGNKLSGSIPECFNNLASLRI 200
I + CH S++L +L + G F+N S+
Sbjct: 574 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 633
Query: 201 LLLGSNELTS-IPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDXXXXXXXX 259
L + N L+ IP ++ + LN N +G +P E+G+L+ I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI----------LD 683
Query: 260 XXXXXXXGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPNL 319
G IP ++ L+ L +++LS N L G IP G F F F N LCG P
Sbjct: 684 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP 743
Query: 320 RVPPCKTS--IHH 330
R P HH
Sbjct: 744 RCDPSNADGYAHH 756
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 131/301 (43%), Gaps = 27/301 (8%)
Query: 2 LQMWENNFSGTIPRFIFNA-SKLSILELSDNSFSGFIPNTFG-NLRNLQALRLSNNYXXX 59
L + EN F+G IP F+ A L+ L+LS N F G +P FG SNN+
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 60 XXXXXXXXXXXXNCKSLTLISFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGI-PE 118
+ L ++ S N G LP+ S+ NLS SL +++ N SG I P
Sbjct: 331 LPMDTLLKM-----RGLKVLDLSFNEFSGELPE-SLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 119 EIGNLTN-LTIIYLGGNKLNGSIPSTXXXXXXXXXXXXENNKLEGSIPDSICHSDELYKL 177
N N L +YL N G IP T N L G+IP S+ +L L
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 178 ELGGNKLSGSIPECFNNLASLRILLLGSNELTS-IPLTFWNLKDILYLNFSSNFFTGPLP 236
+L N L G IP+ + +L L+L N+LT IP N ++ +++ S+N TG +P
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 237 LEIG---NLKIARIDSCDXXXXXXXXXXXXXXXGAIPASLEKLSYLKDLNLSFNKLEGEI 293
IG NL I ++ + G IPA L L L+L+ N G I
Sbjct: 505 KWIGRLENLAILKLSN-------------NSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 294 P 294
P
Sbjct: 552 P 552
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 120/279 (43%), Gaps = 26/279 (9%)
Query: 23 LSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYXXXXXXXXXXXXXXXNCKSLTLISFS 82
L L++S N+FS IP G+ LQ L +S N C L L++ S
Sbjct: 199 LEFLDVSSNNFSTGIP-FLGDCSALQHLDISGN-----KLSGDFSRAISTCTELKLLNIS 252
Query: 83 NNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEI-GNLTNLTIIYLGGNKLNGSIP 141
+N G +P + SL+Y +A +G IP+ + G LT + L GN G++P
Sbjct: 253 SNQFVGPIPPLPL----KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Query: 142 STXXXXXXXXXXXXENNKLEGSIP-DSICHSDELYKLELGGNKLSGSIPECFNNL-ASLR 199
+N G +P D++ L L+L N+ SG +PE NL ASL
Sbjct: 309 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 368
Query: 200 ILLLGSNELTS--IPLTFWNLKDILY-LNFSSNFFTGPLPLEIGNLKIARIDSCDXXXXX 256
L L SN + +P N K+ L L +N FTG +P + N
Sbjct: 369 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS----------ELV 418
Query: 257 XXXXXXXXXXGAIPASLEKLSYLKDLNLSFNKLEGEIPR 295
G IP+SL LS L+DL L N LEGEIP+
Sbjct: 419 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 1 MLQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNT-FGNLRNLQA--------LR 51
+L++ N+FSG IP + + L L+L+ N F+G IP F + A +
Sbjct: 515 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 574
Query: 52 LSNNYXXXXXXXXXXXXXXXNCKSLTLISFSNNPLDGILPKTSVGNLS------HSLEYF 105
+ N+ +S L S I + G+ S S+ +
Sbjct: 575 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 634
Query: 106 EMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTXXXXXXXXXXXXENNKLEGSIP 165
+M+Y +SG IP+EIG++ L I+ LG N ++GSIP +NKL+G IP
Sbjct: 635 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 694
Query: 166 DSICHSDELYKLELGGNKLSGSIPE 190
++ L +++L N LSG IPE
Sbjct: 695 QAMSALTMLTEIDLSNNNLSGPIPE 719
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ ++ EYM +G L YL + Q L + DV A+EYL S Q +H DL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L++D V +SDFG+++ + +D+ T + + + PE + S+ D++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEH------IAQGLRLYRPHLASEK---------- 234
Query: 639 VSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672
V+ + C E ++R K +++ +L + D
Sbjct: 235 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ ++ EYM +G L YL + Q L + DV A+EYL S Q +H DL
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L++D V +SDFG+++ + +D+ T + + + PE + S+ D++
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETAEH------IAQGLRLYRPHLASEK---------- 233
Query: 639 VSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672
V+ + C E ++R K +++ +L + D
Sbjct: 234 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ ++ EYM +G L YL + Q L + DV A+EYL S Q +H DL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L++D V +SDFG+++ + +D+ T + + + PE + S+ D++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEH------IAQGLRLYRPHLASEK---------- 234
Query: 639 VSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672
V+ + C E ++R K +++ +L + D
Sbjct: 235 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ ++ EYM +G L YL + Q L + DV A+EYL S Q +H DL
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
N L++D V +SDFG+++ + +D+ T + + + PE + S+ D++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEH------IAQGLRLYRPHLASEK---------- 229
Query: 639 VSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672
V+ + C E ++R K +++ +L + D
Sbjct: 230 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR 448
S + ++G G FG V RL + VA+K + Y + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HF 507
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYG 566
G+ +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 167 GF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 567 KEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 264
Query: 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 45/320 (14%)
Query: 375 PEAMQRMFSYLELCRATDGFSEN---------NLIGRGSFGSVFKARL----GDGMEVAM 421
P+ +Y E RA F+ +IG G G V RL + VA+
Sbjct: 23 PQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI 82
Query: 422 KVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH 480
K Y R + F E +M H NII++ + +V EYM +GSL+ +L
Sbjct: 83 KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR 142
Query: 481 SSNYILDIYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIA 539
+ + I Q + ++ V + + YL GY +H DL NVL+D N+V +SDFG++
Sbjct: 143 THDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 540 KLLTRE-DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEI 597
++L + D + T I + APE S+ DV+SFG+++ E ++P +
Sbjct: 199 RVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
Query: 598 FNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQR 657
N ++ IS+ E E A C + + ++C + QR
Sbjct: 259 TNRDV-----------ISSVE---------EGYRLPAPMGCPHALHQLMLDCWHKDRAQR 298
Query: 658 INAKEIVTKLLKIRDSLLRN 677
+IV+ L D+L+R+
Sbjct: 299 PRFSQIVSVL----DALIRS 314
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K L+ G + +SF E ++MK ++H ++++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT--LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYM GSL +L L + +++ VA+ + Y+ IH D
Sbjct: 75 EEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 130
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ + ++ ++DFG+A+L+ +++ T + I + APE GR + DV
Sbjct: 131 LRSANILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T+ +
Sbjct: 190 WSFGILLTELVTKGR 204
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 45/320 (14%)
Query: 375 PEAMQRMFSYLELCRATDGFSEN---------NLIGRGSFGSVFKARL----GDGMEVAM 421
P+ +Y E RA F+ +IG G G V RL + VA+
Sbjct: 23 PQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI 82
Query: 422 KVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH 480
K Y R + F E +M H NII++ + +V EYM +GSL+ +L
Sbjct: 83 KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR 142
Query: 481 SSNYILDIYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIA 539
+ + I Q + ++ V + + YL GY +H DL NVL+D N+V +SDFG++
Sbjct: 143 THDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 540 KLLTRE-DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEI 597
++L + D + T I + APE S+ DV+SFG+++ E ++P +
Sbjct: 199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
Query: 598 FNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQR 657
N ++ IS+ E E A C + + ++C + QR
Sbjct: 259 TNRDV-----------ISSVE---------EGYRLPAPMGCPHALHQLMLDCWHKDRAQR 298
Query: 658 INAKEIVTKLLKIRDSLLRN 677
+IV+ L D+L+R+
Sbjct: 299 PRFSQIVSVL----DALIRS 314
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 399 LIGRGSFGSVFKA-RLGDGMEVAMKVF----NLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+IG G FG V++A +GD EVA+K + + ++ E ++ ++H NII +
Sbjct: 14 IIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
C E LV+E+ G L + L DI +N + +A + YLH +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPI 129
Query: 514 IHCDLKPSNVLLDD--------NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
IH DLK SN+L+ N + ++DFG+A RE T + +MAPE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRTTKMSAAGAYAWMAPEV 185
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ S DV+S+G++L E T + P
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 145/364 (39%), Gaps = 54/364 (14%)
Query: 2 LQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYXXXXX 61
L + N F+G IP + N S+L L LS N SG IP++ G+L L+ L+L N
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 62 XXXXXXXXX-------------------XNCKSLTLISFSNNPLDGILPKTSVGNLSHSL 102
NC +L IS SNN L G +PK +G L +L
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW-IGRL-ENL 516
Query: 103 EYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTXXXXXXXXXXXXENNKLEG 162
+++ + SG IP E+G+ +L + L N NG+IP+ K
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576
Query: 163 SIPDS----ICH------------SDELYKLE------LGGNKLSGSIPECFNNLASLRI 200
I + CH S++L +L + G F+N S+
Sbjct: 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636
Query: 201 LLLGSNELTS-IPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDXXXXXXXX 259
L + N L+ IP ++ + LN N +G +P E+G+L+ I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI----------LD 686
Query: 260 XXXXXXXGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPNL 319
G IP ++ L+ L +++LS N L G IP G F F F N LCG P
Sbjct: 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP 746
Query: 320 RVPP 323
R P
Sbjct: 747 RCDP 750
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 131/301 (43%), Gaps = 27/301 (8%)
Query: 2 LQMWENNFSGTIPRFIFNA-SKLSILELSDNSFSGFIPNTFG-NLRNLQALRLSNNYXXX 59
L + EN F+G IP F+ A L+ L+LS N F G +P FG SNN+
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 60 XXXXXXXXXXXXNCKSLTLISFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGI-PE 118
+ L ++ S N G LP+ S+ NLS SL +++ N SG I P
Sbjct: 334 LPMDTLLKM-----RGLKVLDLSFNEFSGELPE-SLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 119 EIGNLTN-LTIIYLGGNKLNGSIPSTXXXXXXXXXXXXENNKLEGSIPDSICHSDELYKL 177
N N L +YL N G IP T N L G+IP S+ +L L
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 178 ELGGNKLSGSIPECFNNLASLRILLLGSNELTS-IPLTFWNLKDILYLNFSSNFFTGPLP 236
+L N L G IP+ + +L L+L N+LT IP N ++ +++ S+N TG +P
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 237 LEIG---NLKIARIDSCDXXXXXXXXXXXXXXXGAIPASLEKLSYLKDLNLSFNKLEGEI 293
IG NL I ++ + G IPA L L L+L+ N G I
Sbjct: 508 KWIGRLENLAILKLSN-------------NSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 294 P 294
P
Sbjct: 555 P 555
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 120/279 (43%), Gaps = 26/279 (9%)
Query: 23 LSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYXXXXXXXXXXXXXXXNCKSLTLISFS 82
L L++S N+FS IP G+ LQ L +S N C L L++ S
Sbjct: 202 LEFLDVSSNNFSTGIP-FLGDCSALQHLDISGN-----KLSGDFSRAISTCTELKLLNIS 255
Query: 83 NNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEI-GNLTNLTIIYLGGNKLNGSIP 141
+N G +P + SL+Y +A +G IP+ + G LT + L GN G++P
Sbjct: 256 SNQFVGPIPPLPL----KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Query: 142 STXXXXXXXXXXXXENNKLEGSIP-DSICHSDELYKLELGGNKLSGSIPECFNNL-ASLR 199
+N G +P D++ L L+L N+ SG +PE NL ASL
Sbjct: 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 371
Query: 200 ILLLGSNELTS--IPLTFWNLKDILY-LNFSSNFFTGPLPLEIGNLKIARIDSCDXXXXX 256
L L SN + +P N K+ L L +N FTG +P + N
Sbjct: 372 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS----------ELV 421
Query: 257 XXXXXXXXXXGAIPASLEKLSYLKDLNLSFNKLEGEIPR 295
G IP+SL LS L+DL L N LEGEIP+
Sbjct: 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 1 MLQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNT-FGNLRNLQA--------LR 51
+L++ N+FSG IP + + L L+L+ N F+G IP F + A +
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 577
Query: 52 LSNNYXXXXXXXXXXXXXXXNCKSLTLISFSNNPLDGILPKTSVGNLS------HSLEYF 105
+ N+ +S L S I + G+ S S+ +
Sbjct: 578 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637
Query: 106 EMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTXXXXXXXXXXXXENNKLEGSIP 165
+M+Y +SG IP+EIG++ L I+ LG N ++GSIP +NKL+G IP
Sbjct: 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 697
Query: 166 DSICHSDELYKLELGGNKLSGSIPE 190
++ L +++L N LSG IPE
Sbjct: 698 QAMSALTMLTEIDLSNNNLSGPIPE 722
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 400 IGRGSFGSVFKARL---GD--GMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKV 453
+G G FG V R GD G +VA+K + G E E+++++ H NI+K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 454 ISSCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
C+ + L++E++P GSL++YL + +++ Q+L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 133
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDQSTIQTQTLATIGYMAPEYGKEGR 570
Q +H DL NVL++ + DFG+ K + T ++ T++ + + + APE + +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 571 VSANGDVYSFGIMLMETFT 589
DV+SFG+ L E T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 147/316 (46%), Gaps = 37/316 (11%)
Query: 370 DANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFN 425
D + + Q + + + AT+ S + ++G G FG V RL + VA+K
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 426 LQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY 484
+ Y + + F E +M H NII++ + + +V E M +GSL+ +L +
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 142
Query: 485 ILDIYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543
+ Q + ++ +AS ++YL GY +H DL N+L++ N+V +SDFG++++L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 544 REDQSTIQTQ-TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGE 601
+ ++ T+ I + +PE + ++ DV+S+GI+L E + ++P E+ N +
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 602 MTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAK 661
+ + VD E C + ++ + ++C + R +
Sbjct: 259 VI--------------KAVD------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 662 EIVTKLLKIRDSLLRN 677
+IV+ I D L+RN
Sbjct: 299 QIVS----ILDKLIRN 310
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 400 IGRGSFGSVFKARL---GD--GMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKV 453
+G G FG V R GD G +VA+K + G E E+++++ H NI+K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 454 ISSCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
C+ + L++E++P GSL++YL + +++ Q+L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 145
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDQSTIQTQTLATIGYMAPEYGKEGR 570
Q +H DL NVL++ + DFG+ K + T ++ T++ + + + APE + +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 571 VSANGDVYSFGIMLMETFT 589
DV+SFG+ L E T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR 448
S + ++G G FG V RL + VA+K + Y + + F E +M H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HF 507
NII++ + + +V E M +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT-IGYMAPEYG 566
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 138 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 567 KEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 235
Query: 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 236 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 281
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 16/236 (6%)
Query: 365 RGPPNDANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMK- 422
+GPP P +A++ Y L F IGRG F V++A L DG+ VA+K
Sbjct: 9 QGPPVPQFQPQKALRPDMGYNTLA----NFRIEKKIGRGQFSEVYRAACLLDGVPVALKK 64
Query: 423 --VFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLE---K 477
+F+L + E +++K + H N+IK +S + +VLE G L K
Sbjct: 65 VQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK 124
Query: 478 YLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537
+ ++ + + SALE++H S +V+H D+KP+NV + V L D G
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 181
Query: 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ + + ++T + T YM+PE E + D++S G +L E + P
Sbjct: 182 LGRFFS--SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 88 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 203 WSFGILLTEIVTHGR 217
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 81 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 196 WSFGILLTEIVTHGR 210
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 28/211 (13%)
Query: 397 NNLIGRGSFGSVFKARLG-DG--MEVAMKVFNLQYGRV--FKSFDVECEMMKSIRHR-NI 450
++IG G+FG V KAR+ DG M+ A+K +Y + F E E++ + H NI
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 451 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI---------------LDIYQRLNIM 495
I ++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
DVA ++YL Q IH DL N+L+ +N VA ++DFG+++ ++ +T
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
+ +MA E + N DV+S+G++L E
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 80 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 195 WSFGILLTEIVTHGR 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 28/211 (13%)
Query: 397 NNLIGRGSFGSVFKARLG-DG--MEVAMKVFNLQYGRV--FKSFDVECEMMKSIRHR-NI 450
++IG G+FG V KAR+ DG M+ A+K +Y + F E E++ + H NI
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 451 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI---------------LDIYQRLNIM 495
I ++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
DVA ++YL Q IH DL N+L+ +N VA ++DFG+++ ++ +T
Sbjct: 149 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
+ +MA E + N DV+S+G++L E
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I L I + L++ +A + ++ IH D
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I L I + L++ +A + ++ IH D
Sbjct: 87 QEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 142
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 202 WSFGILLTEIVTHGR 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 85 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 200 WSFGILLTEIVTHGR 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIR 446
+D + ++G G V AR L D +VA+KV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 447 HRNIIKVISSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
H I+ V + E +V+EY+ +L +H+ + + I + +A A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT-LATIGYM 561
+ L+F + +IH D+KP+N+L+ + DFGIA+ + S QT + T Y+
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 562 APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE----MTLKHWVNDWLPISTK 617
+PE + V A DVYS G +L E T + P F G+ + +H D +P S +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSAR 242
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 25/242 (10%)
Query: 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIR 446
+D + ++G G V AR L D +VA+KV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 447 HRNIIKVISSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
H I+ V + E +V+EY+ +L +H+ + + I + +A A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG--- 559
+ L+F + +IH D+KP+N+++ + DFGIA+ + D TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 560 YMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE----MTLKHWVNDWLPIS 615
Y++PE + V A DVYS G +L E T + P F G+ + +H D +P S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPS 240
Query: 616 TK 617
+
Sbjct: 241 AR 242
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I L I + L++ +A + ++ IH D
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 25/242 (10%)
Query: 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIR 446
+D + ++G G V AR L D +VA+KV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 447 HRNIIKVISSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
H I+ V + E +V+EY+ +L +H+ + + I + +A A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---PKRAIEV-IADAC 126
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG--- 559
+ L+F + +IH D+KP+N+++ + DFGIA+ + D TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 560 YMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE----MTLKHWVNDWLPIS 615
Y++PE + V A DVYS G +L E T + P F G+ + +H D +P S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPDSVAYQHVREDPIPPS 240
Query: 616 TK 617
+
Sbjct: 241 AR 242
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 84 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 199 WSFGILLTEIVTHGR 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 85 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 200 WSFGILLTEIVTHGR 214
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 135/291 (46%), Gaps = 34/291 (11%)
Query: 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR 448
S + ++G G FG V RL + VA+K + Y + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NII++ + + +V E M +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS-- 164
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYGK 567
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 165 -DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 568 EGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD----- 264
Query: 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 74 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 189 WSFGILLTEIVTHGR 203
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 28/260 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
+G G FG V+ A +VA+K V ++F E +MK+++H ++K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCDL 518
E ++ E+M GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
+ +N+L+ ++V ++DFG+A+++ +++ T + I + APE G + DV+
Sbjct: 138 RAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 579 SFGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQ 637
SFGI+LME T + P + N E+ L R E
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPEVI-------------------RALER-GYRMPRPEN 236
Query: 638 CVSFVFNVAMECTVESPEQR 657
C ++N+ M C PE+R
Sbjct: 237 CPEELYNIMMRCWKNRPEER 256
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I L I + L++ +A + ++ IH D
Sbjct: 89 QEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 144
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 204 WSFGILLTEIVTHGR 218
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 388 CRATDGFSENNL-----IGRGSFGSVFKAR---LGDGMEVAMKVFNLQYG--RVFKSFDV 437
C+ F E +L +G+G+FGSV R LGD + V LQ+ + F
Sbjct: 1 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 438 ECEMMKSIRHRNIIKV--ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM 495
E +++K++ I+K +S + LV+EY+P G L +L LD + L
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-REDQSTIQTQT 554
+ +EYL S + +H DL N+L++ ++DFG+AKLL +D ++
Sbjct: 121 SQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ I + APE + S DV+SFG++L E FT
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 385 LELCRATDGFSENNL-----IGRGSFGSVFKAR---LGDGMEVAMKVFNLQYG--RVFKS 434
L C+ F E +L +G+G+FGSV R LGD + V LQ+ +
Sbjct: 11 LYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 70
Query: 435 FDVECEMMKSIRHRNIIKV--ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL 492
F E +++K++ I+K +S + LV+EY+P G L +L LD + L
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 130
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-REDQSTIQ 551
+ +EYL S + +H DL N+L++ ++DFG+AKLL +D ++
Sbjct: 131 LYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ I + APE + S DV+SFG++L E FT
Sbjct: 188 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E +++E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E S + D+++ G ++ +
Sbjct: 206 LTEKSASKSSDLWALGCIIYQ 226
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V+ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +V EYMP+G+L YL N + L + ++SA+EYL IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRD 155
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N V ++DFG+++L+T D T I + APE S DV
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 36/288 (12%)
Query: 398 NLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+IG G FG V RL + VA+K + Y + + F E +M H NII
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HFGYSA 511
+ + + +V EYM +GSL+ +L ++ + Q + ++ +++ ++YL GY
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY-- 145
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYGKEGR 570
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + APE +
Sbjct: 146 --VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 571 VSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
++ DV+S+GI++ E + ++P E+ N ++ I E E
Sbjct: 204 FTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV-----------IKAVE---------EG 243
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRN 677
+ C + ++ + ++C + R EIV L D L+RN
Sbjct: 244 YRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML----DKLIRN 287
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 394 FSENNL-----IGRGSFGSVFKAR---LGDGMEVAMKVFNLQYG--RVFKSFDVECEMMK 443
F E +L +G+G+FGSV R LGD + V LQ+ + F E +++K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 444 SIRHRNIIKV--ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
++ I+K +S LV+EY+P G L +L LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-REDQSTIQTQTLATIGY 560
+EYL S + +H DL N+L++ ++DFG+AKLL +D ++ + I +
Sbjct: 124 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 561 MAPEYGKEGRVSANGDVYSFGIMLMETFT 589
APE + S DV+SFG++L E FT
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 394 FSENNL-----IGRGSFGSVFKAR---LGDGMEVAMKVFNLQYG--RVFKSFDVECEMMK 443
F E +L +G+G+FGSV R LGD + V LQ+ + F E +++K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 444 SIRHRNIIKV--ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
++ I+K +S + LV+EY+P G L +L LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-REDQSTIQTQTLATIGY 560
+EYL S + +H DL N+L++ ++DFG+AKLL +D ++ + I +
Sbjct: 128 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 561 MAPEYGKEGRVSANGDVYSFGIMLMETFT 589
APE + S DV+SFG++L E FT
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 28/214 (13%)
Query: 397 NNLIGRGSFGSVFKARLG-DG--MEVAMKVFNLQYGRV--FKSFDVECEMMKSIRHR-NI 450
++IG G+FG V KAR+ DG M+ A+K +Y + F E E++ + H NI
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 451 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI---------------LDIYQRLNIM 495
I ++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
DVA ++YL Q IH +L N+L+ +N VA ++DFG+++ ++ +T
Sbjct: 146 ADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 199
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MA E + N DV+S+G++L E +
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E +++E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G GSFG V + A G + VA+K L F E M S+ HRN+I+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEG 569
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 241
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQR 657
E C ++NV ++C PE R
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNL---QYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
+G G +V+ A ++VA+K + + K F+ E + H+NI+ +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
++ LV+EY+ +L +Y+ S L + +N + +++ H +++H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGP-LSVDTAINFTNQILDGIKHAH---DMRIVH 134
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
D+KP N+L+D N + DFGIAK L+ E T L T+ Y +PE K
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193
Query: 576 DVYSFGIMLMETFTRKKPTDEIFNGE----MTLKHWVNDWLPISTKEI 619
D+YS GI+L E + P FNGE + +KH + D +P T ++
Sbjct: 194 DIYSIGIVLYEMLVGEPP----FNGETAVSIAIKH-IQDSVPNVTTDV 236
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G GSFG V + A G + VA+K L F E M S+ HRN+I+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEG 569
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 231
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQR 657
E C ++NV ++C PE R
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 28/260 (10%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
+G G FG V+ A +VA+K V ++F E +MK+++H ++K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCDL 518
E ++ E+M GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
+ +N+L+ ++V ++DFG+A+++ +++ T + I + APE G + DV+
Sbjct: 311 RAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 579 SFGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQ 637
SFGI+LME T + P + N E+ L R E
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNPEVI-------------------RALER-GYRMPRPEN 409
Query: 638 CVSFVFNVAMECTVESPEQR 657
C ++N+ M C PE+R
Sbjct: 410 CPEELYNIMMRCWKNRPEER 429
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 400 IGRGSFGSVF-----KARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKV 453
+G G FG V G G VA+K G +S + E ++++++ H +IIK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 454 ISSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
C ++ K+L V+EY+P GSL YL + + + Q L + + YLH S
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---SQ 136
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEGR 570
IH +L NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 571 VSANGDVYSFGIMLMETFT 589
DV+SFG+ L E T
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 39/307 (12%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKA-RLGDG----MEVAMKVFNLQY 428
P +A R+ EL R ++G G+FG+V+K + +G + VA+K+ N
Sbjct: 27 PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 429 G-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
G + F E +M S+ H ++++++ C + + LV + MPHG L +Y+H +
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 138
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+A+LL +++
Sbjct: 139 SQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKH 606
I +MA E + + DV+S+G+ + E T KP D
Sbjct: 196 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG---------- 245
Query: 607 WVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666
I T+EI P+LL + + C V+ V ++C + + R KE+ +
Sbjct: 246 -------IPTREI--PDLLEKGE-RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 295
Query: 667 LLKI-RD 672
++ RD
Sbjct: 296 FSRMARD 302
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ E+M +G+L YL N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +++E+M +G+L YL N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMM 442
+ + F ++G GSF +V AR L E A+K+ L+ + K V E ++M
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 64
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
+ H +K+ + ++E L Y +G L KY+ + R ++ SAL
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 123
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
EYLH +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++
Sbjct: 124 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 563 PEYGKEGRVSANGDVYSFGIMLME 586
PE E + D+++ G ++ +
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQ 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMM 442
+ + F ++G GSF +V AR L E A+K+ L+ + K V E ++M
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 63
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
+ H +K+ + ++E L Y +G L KY+ + R ++ SAL
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 122
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
EYLH +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++
Sbjct: 123 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 563 PEYGKEGRVSANGDVYSFGIMLME 586
PE E + D+++ G ++ +
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQ 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMM 442
+ + F ++G GSF +V AR L E A+K+ L+ + K V E ++M
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 61
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
+ H +K+ + ++E L Y +G L KY+ + R ++ SAL
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 120
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
EYLH +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++
Sbjct: 121 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 563 PEYGKEGRVSANGDVYSFGIMLME 586
PE E + D+++ G ++ +
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQ 201
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G GSFG V + A G + VA+K L F E M S+ HRN+I+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEG 569
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 241
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQR 657
E C ++NV ++C PE R
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I L I + L++ +A + ++ IH +
Sbjct: 75 QEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRN 130
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ +++ T + I + APE G + DV
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 190 WSFGILLTEIVTHGR 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMM 442
+ + F ++G GSF +V AR L E A+K+ L+ + K V E ++M
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 62
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
+ H +K+ + ++E L Y +G L KY+ + R ++ SAL
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 121
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
EYLH +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++
Sbjct: 122 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 563 PEYGKEGRVSANGDVYSFGIMLME 586
PE E + D+++ G ++ +
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQ 202
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +++E+M +G+L YL N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G GSFG V + A G + VA+K L F E M S+ HRN+I+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEG 569
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 231
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQR 657
E C ++NV ++C PE R
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E +++E+M +G+L YL N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G GSFG V + A G + VA+K L F E M S+ HRN+I+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEG 569
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 235
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQR 657
E C ++NV ++C PE R
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 399 LIGRGSFGSVFKARL-GDGME---VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKV 453
+IG G FG V + RL G + VA+K Y R + F E +M H NII++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+N ++ E+M +G+L+ +L ++ + Q + ++ +AS + YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSY 139
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA---TIGYMAPEYGKEGR 570
+H DL N+L++ N+V +SDFG+++ L +T +L I + APE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 571 VSANGDVYSFGIMLMETFT 589
++ D +S+GI++ E +
Sbjct: 200 FTSASDAWSYGIVMWEVMS 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G GSFG V + A G + VA+K L F E M S+ HRN+I+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEG 569
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 231
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQR 657
E C ++NV ++C PE R
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 90
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 149
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 207 LTEKSACKSSDLWALGCIIYQ 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 39/307 (12%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKA-RLGDG----MEVAMKVFNLQY 428
P +A R+ EL R ++G G+FG+V+K + +G + VA+K+ N
Sbjct: 4 PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 429 G-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
G + F E +M S+ H ++++++ C + + LV + MPHG L +Y+H +
Sbjct: 57 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 115
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+A+LL +++
Sbjct: 116 SQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKH 606
I +MA E + + DV+S+G+ + E T KP D
Sbjct: 173 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG---------- 222
Query: 607 WVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666
I T+EI P+LL + + C V+ V ++C + + R KE+ +
Sbjct: 223 -------IPTREI--PDLLEKGE-RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 272
Query: 667 LLKI-RD 672
++ RD
Sbjct: 273 FSRMARD 279
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G GSFG V + A G + VA+K L F E M S+ HRN+I+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEG 569
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 235
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQR 657
E C ++NV ++C PE R
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 135
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 195 IKSDVWAFGVLLWEIAT 211
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQ 226
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 144
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 204 IKSDVWAFGVLLWEIAT 220
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 206 LTEKSACKSSDLWALGCIIYQ 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 400 IGRGSFGSVF-----KARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKV 453
+G G FG V G G VA+K G +S + E ++++++ H +IIK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 454 ISSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
C ++ K+L V+EY+P GSL YL + + + Q L + + YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQ 136
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEGR 570
IH +L NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 571 VSANGDVYSFGIMLMETFT 589
DV+SFG+ L E T
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 90
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 149
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 207 LTEKSACKSSDLWALGCIIYQ 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 204 LTEKSACKSSDLWALGCIIYQ 224
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 71
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 130
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 131 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 188 LTEKSACKSSDLWALGCIIYQ 208
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 92
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 151
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 152 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 209 LTEKSACKSSDLWALGCIIYQ 229
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 204 LTEKSACKSSDLWALGCIIYQ 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 206 LTEKSACKSSDLWALGCIIYQ 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 206 LTEKSACKSSDLWALGCIIYQ 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 204 LTEKSACKSSDLWALGCIIYQ 224
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 206 LTEKSACKSSDLWALGCIIYQ 226
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 44/285 (15%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNL-------QYGRVFKSFDVECEMMKSIRHRNII 451
IG+G FG V K RL D VA+K L + F+ F E +M ++ H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K+ N +V+E++P G L L + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 512 QVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTREDQSTIQTQT--LATIGYMAPE 564
++H DL+ N+ LD+N + A ++DFG++ Q ++ + + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-------QQSVHSVSGLLGNFQWMAPE 196
Query: 565 Y--GKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622
+E + D YSF ++L T + P DE G++
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI----------------- 239
Query: 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
N++ E + E C + NV C P++R + IV +L
Sbjct: 240 NMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 86
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 145
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 203 LTEKSACKSSDLWALGCIIYQ 223
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 86
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 145
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 203 LTEKSACKSSDLWALGCIIYQ 223
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 400 IGRGSFGSVF-----KARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKV 453
+G G FG V G G VA+K G +S + E ++++++ H +IIK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 454 ISSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
C + +L V+EY+P GSL YL + + + Q L + + YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQ 153
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEGR 570
IH DL NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 571 VSANGDVYSFGIMLMETFTR 590
DV+SFG+ L E T
Sbjct: 214 FYYASDVWSFGVTLYELLTH 233
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 400 IGRGSFGSVF-----KARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKV 453
+G G FG V G G VA+K G +S + E E+++++ H +I+K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 454 ISSCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
C ++ K+ LV+EY+P GSL YL + + + Q L + + YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 130
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEGR 570
IH L NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 571 VSANGDVYSFGIMLMETFT 589
DV+SFG+ L E T
Sbjct: 191 FYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 400 IGRGSFGSVF-----KARLGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIRHRNIIKV 453
+G G FG V G G VA+K G +S + E E+++++ H +I+K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 454 ISSCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
C ++ K+ LV+EY+P GSL YL + + + Q L + + YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 131
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTIQTQTLATIGYMAPEYGKEGR 570
IH L NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 571 VSANGDVYSFGIMLMETFT 589
DV+SFG+ L E T
Sbjct: 192 FYYASDVWSFGVTLYELLT 210
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ + + E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ------ 490
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 491 ----RLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ E+M +G+L YL N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 134/290 (46%), Gaps = 44/290 (15%)
Query: 400 IGRGSFGSVFKARL-----GDGME-VAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G FG V+K L G+ + VA+K + G + + F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL-----HSS----------NYILDIYQRLNIMID 497
++ + ++ +++ Y HG L ++L HS L+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
+A+ +EYL S V+H DL NVL+ D + +SD G+ + + D + +L
Sbjct: 137 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
I +MAPE G+ S + D++S+G++L E F+ + + + S +
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS----------------YGLQPYCGYSNQ 237
Query: 618 EIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++V+ + R + C ++V+ + +EC E P +R K+I ++L
Sbjct: 238 DVVE---MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ E+M +G+L YL N + L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 25/242 (10%)
Query: 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIR 446
+D + ++G G V AR L +VA+KV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 447 HRNIIKVISSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
H I+ V ++ E +V+EY+ +L +H+ + + I + +A A
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG--- 559
+ L+F + +IH D+KP+N+++ + DFGIA+ + D TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 560 YMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE----MTLKHWVNDWLPIS 615
Y++PE + V A DVYS G +L E T + P F G+ + +H D +P S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPS 240
Query: 616 TK 617
+
Sbjct: 241 AR 242
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 36/237 (15%)
Query: 372 NMPP---EAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQ 427
+MPP E F + E+ RA IG+GSFG V + D ++ AMK N Q
Sbjct: 1 SMPPVFDENEDVNFDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQ 51
Query: 428 -------YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH 480
VFK E ++M+ + H ++ + S +EE +V++ + G L +L
Sbjct: 52 KCVERNEVRNVFK----ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ 107
Query: 481 SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540
+ + + +L I ++ AL+YL + ++IH D+KP N+LLD++ H++DF IA
Sbjct: 108 QNVHFKEETVKLFI-CELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAA 163
Query: 541 LLTREDQSTIQTQTLA-TIGYMAPEY---GKEGRVSANGDVYSFGIMLMETFTRKKP 593
+L RE Q T T+A T YMAPE K S D +S G+ E ++P
Sbjct: 164 MLPRETQIT----TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ E+M +G+L YL N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 134/290 (46%), Gaps = 44/290 (15%)
Query: 400 IGRGSFGSVFKARL-----GDGME-VAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G FG V+K L G+ + VA+K + G + + F E + ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYL-----HSS----------NYILDIYQRLNIMID 497
++ + ++ +++ Y HG L ++L HS L+ ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
+A+ +EYL S V+H DL NVL+ D + +SD G+ + + D + +L
Sbjct: 154 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
I +MAPE G+ S + D++S+G++L E F+ + + + S +
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS----------------YGLQPYCGYSNQ 254
Query: 618 EIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++V+ + R + C ++V+ + +EC E P +R K+I ++L
Sbjct: 255 DVVE---MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF +V AR L E A+K+ L+ + K V E ++M +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 94
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 153
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 154 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 211 LTEKSACKSSDLWALGCIIYQ 231
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV-FKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ + +VA+K L+ G + ++F E +MK+++H ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFGYSAQVIHCD 517
EE ++ EYM GSL +L S + +L + +A + Y+ IH D
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 135
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +NVL+ ++++ ++DFG+A+++ +++ T + I + APE G + DV
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T K
Sbjct: 195 WSFGILLYEIVTYGK 209
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 44/285 (15%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNL-------QYGRVFKSFDVECEMMKSIRHRNII 451
IG+G FG V K RL D VA+K L + F+ F E +M ++ H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K+ N +V+E++P G L L + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 512 QVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTREDQSTIQTQT--LATIGYMAPE 564
++H DL+ N+ LD+N + A ++DFG + Q ++ + + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-------QQSVHSVSGLLGNFQWMAPE 196
Query: 565 Y--GKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622
+E + D YSF ++L T + P DE G++
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI----------------- 239
Query: 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
N++ E + E C + NV C P++R + IV +L
Sbjct: 240 NMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ E+M +G+L YL N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 399 LIGRGSFGSVFKARL-GDGME---VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKV 453
+IG G FG V + RL G + VA+K Y R + F E +M H NII++
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+N ++ E+M +G+L+ +L ++ + Q + ++ +AS + YL
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSY 137
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA---TIGYMAPEYGKEGR 570
+H DL N+L++ N+V +SDFG+++ L T +L I + APE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 571 VSANGDVYSFGIMLMETFT 589
++ D +S+GI++ E +
Sbjct: 198 FTSASDAWSYGIVMWEVMS 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ + + E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF-KSFDVECEMMKSIRHRNIIKVISSCS 458
+G G G V+ +VA+K +L+ G + +F E +MK ++H+ ++++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCD 517
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +N+L+ D + ++DFG+A+L+ + + T + I + APE G + DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T +
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ + + E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIR 446
+D + ++G G V AR L +VA+KV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 447 HRNIIKVISSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
H I+ V + E +V+EY+ +L +H+ + + I + +A A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG--- 559
+ L+F + +IH D+KP+N+++ + DFGIA+ + D TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 560 YMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE----MTLKHWVNDWLPIS 615
Y++PE + V A DVYS G +L E T + P F G+ + +H D +P S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPS 240
Query: 616 TK 617
+
Sbjct: 241 AR 242
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-----ECEMMKSI 445
+ F ++G GSF + AR L E A+K+ L+ + K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H +K+ + ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 566 GKEGRVSANGDVYSFGIMLME 586
E + D+++ G ++ +
Sbjct: 204 LTEKSACKSSDLWALGCIIYQ 224
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ + + E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 397 NNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNII 451
+IG G FG V RL + VA+K + Y + + F E +M H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HFGYS 510
+ + + +V+E+M +G+L+ +L + + Q + ++ +A+ + YL GY
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY- 166
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATI--GYMAPEYGKE 568
+H DL N+L++ N+V +SDFG+++++ +D + T T I + APE +
Sbjct: 167 ---VHRDLAARNILVNSNLVCKVSDFGLSRVI-EDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 569 GRVSANGDVYSFGIMLMETFT 589
+ ++ DV+S+GI++ E +
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 130/310 (41%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G FG V K + + + VA+K+ + + E EMM
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 144 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 259
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 260 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 295
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 296 KQLVEDLDRI 305
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ + + E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 669 KI 670
+I
Sbjct: 308 RI 309
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 25/243 (10%)
Query: 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIR 446
+D + ++G G V AR L +VA+KV R + F E + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 447 HRNIIKVISSCSNEE----FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
H I+ V + E +V+EY+ +L +H+ + + I + +A A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 143
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG--- 559
+ L+F + +IH D+KP+N+++ + DFGIA+ + D TQT A IG
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 201
Query: 560 YMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE----MTLKHWVNDWLPIS 615
Y++PE + V A DVYS G +L E T + P F G+ + +H D +P S
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPS 257
Query: 616 TKE 618
+
Sbjct: 258 ARH 260
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ E+M +G+L YL N ++ L + ++SA+EYL IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 442 WAFGVLLWEIAT 453
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 130/310 (41%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G FG V K + + + VA+K+ + + E EMM
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 142 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 257
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 258 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 293
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 294 KQLVEDLDRI 303
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 130/310 (41%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G FG V K + + + VA+K+ + + E EMM
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 147 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 262
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 263 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 298
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 299 KQLVEDLDRI 308
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 130/310 (41%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G FG V K + + + VA+K+ + + E EMM
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 201 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 316
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 317 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 352
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 353 KQLVEDLDRI 362
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASALEYLHFGYSAQ 512
E ++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 335
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
IH +L N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 573 ANGDVYSFGIMLMETFT 589
DV++FG++L E T
Sbjct: 395 IKSDVWAFGVLLWEIAT 411
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 47/285 (16%)
Query: 394 FSENNLIGRGSFGSVFKARL----GDGMEVAMKVFNLQYGRVFKSFDVE-----CEMMKS 444
F+ ++G+G FGSV +A+L G ++VA+K+ + S D+E MK
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK---ADIIASSDIEEFLREAACMKE 81
Query: 445 IRHRNIIKVISSCSNEEFKA------LVLEYMPHGSLEKYLHSSN-----YILDIYQRLN 493
H ++ K++ K ++L +M HG L +L +S + L + +
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
M+D+A +EYL S IH DL N +L ++M ++DFG+++ + D
Sbjct: 142 FMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMTLKHWVNDWL 612
+ + ++A E + + + DV++FG+ + E TR + P I N E + ++L
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL 252
Query: 613 PISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQR 657
I + P +C+ V+++ +C P+QR
Sbjct: 253 -IGGNRLKQP-------------PECMEEVYDLMYQCWSADPKQR 283
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 197 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 304
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 305 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
Query: 669 KI 670
+I
Sbjct: 349 RI 350
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 398 NLIGRGSFGSVFKARLG--DGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIK 452
+IG G FG V RL E+ + + L+ G + + F E +M H NII
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ + + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 151
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYGKEGRV 571
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + APE +
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 572 SANGDVYSFGIMLMETFT 589
++ DV+S+GI++ E +
Sbjct: 212 TSASDVWSYGIVMWEVMS 229
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVFNLQYGRV-FKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ------ 490
K I +H+NII ++ +C+ + +++EY G+L +YL + Y DI +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 491 ----RLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G +G V++ + VA+K V + F E +MK I+H N+++++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
E ++ E+M +G+L YL N + L + ++SA+EYL IH +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRN 343
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 578 YSFGIMLMETFT 589
++FG++L E T
Sbjct: 403 WAFGVLLWEIAT 414
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 44/285 (15%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNL-------QYGRVFKSFDVECEMMKSIRHRNII 451
IG+G FG V K RL D VA+K L + F+ F E +M ++ H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K+ N +V+E++P G L L + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 512 QVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTREDQSTIQTQT--LATIGYMAPE 564
++H DL+ N+ LD+N + A ++DF ++ Q ++ + + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-------QQSVHSVSGLLGNFQWMAPE 196
Query: 565 Y--GKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622
+E + D YSF ++L T + P DE G++
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI----------------- 239
Query: 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
N++ E + E C + NV C P++R + IV +L
Sbjct: 240 NMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 398 NLIGRGSFGSVFKARLG--DGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIK 452
+IG G FG V RL E+ + + L+ G + + F E +M H NII
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ + + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 130
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYGKEGRV 571
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + APE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 572 SANGDVYSFGIMLMETFT 589
++ DV+S+GI++ E +
Sbjct: 191 TSASDVWSYGIVMWEVMS 208
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 130/310 (41%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ + + E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSS-----------NYILDIYQ 490
K I +H+NII ++ +C+ + +++EY G+L +YL + N + +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 491 RLNIMI----DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 398 NLIGRGSFGSVFKARLG--DGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIK 452
+IG G FG V RL E+ + + L+ G + + F E +M H NII
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ + + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 136
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMAPEYGKEGRV 571
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 572 SANGDVYSFGIMLMETFT 589
++ DV+S+GI++ E +
Sbjct: 197 TSASDVWSYGIVMWEVMS 214
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 669 KI 670
+I
Sbjct: 308 RI 309
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKV---- 453
+G G FG V + D G +VA+K + + + + +E ++MK + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 454 --ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR--LNIMIDVASALEYLHFGY 509
+ + + L +EY G L KYL+ + + ++ D++SAL YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH--- 138
Query: 510 SAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
++IH DLKP N++L ++ + D G AK L DQ + T+ + T+ Y+APE
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPELL 195
Query: 567 KEGRVSANGDVYSFGIMLMETFTRKKP 593
++ + + D +SFG + E T +P
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKV---- 453
+G G FG V + D G +VA+K + + + + +E ++MK + H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 454 --ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR--LNIMIDVASALEYLHFGY 509
+ + + L +EY G L KYL+ + + ++ D++SAL YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH--- 139
Query: 510 SAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
++IH DLKP N++L ++ + D G AK L DQ + T+ + T+ Y+APE
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPELL 196
Query: 567 KEGRVSANGDVYSFGIMLMETFTRKKP 593
++ + + D +SFG + E T +P
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 148 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 255
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 256 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
Query: 669 KI 670
+I
Sbjct: 300 RI 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 145 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 252
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 253 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 669 KI 670
+I
Sbjct: 297 RI 298
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 141 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 248
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 249 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
Query: 669 KI 670
+I
Sbjct: 293 RI 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 149 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 256
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 257 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
Query: 669 KI 670
+I
Sbjct: 301 RI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 669 KI 670
+I
Sbjct: 308 RI 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 400 IGRGSFGSVF--------KARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRN 449
+G G+FG V K + +VA+K+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 494
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNGEMTLKHWV 608
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668
L +E C + ++ + +C P QR K++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 669 KI 670
+I
Sbjct: 308 RI 309
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ + + E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++ Y G+L +YL + Y DI +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 116/272 (42%), Gaps = 34/272 (12%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
++G+G FG K + EV MK ++F E ++M+ + H N++K I
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
++ + EY+ G+L + S + QR++ D+AS + YLH S +IH D
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRD 133
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTRED---------QSTIQTQTLATIG---YMAPEY 565
L N L+ +N ++DFG+A+L+ E + + + +G +MAPE
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625
DV+SFGI+L E R N + D+LP +D L
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEIIGR-------VNAD-------PDYLP----RTMDFGLN 235
Query: 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQR 657
R ++ C F + + C PE+R
Sbjct: 236 VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKR 267
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 8/219 (3%)
Query: 376 EAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKS 434
E ++++ S + + ++ IG+G+ G+V+ A + G EVA++ NLQ +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL 63
Query: 435 FDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI 494
E +M+ ++ NI+ + S + +V+EY+ GSL + + +D Q +
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAV 121
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
+ ALE+LH S QVIH D+K N+LL + L+DFG +T E +++
Sbjct: 122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEM 176
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ T +MAPE D++S GIM +E + P
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 44/294 (14%)
Query: 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV-----FKSFDVECEMMKSIRHRNII 451
+ +IG+G FG V+ D + ++ R+ ++F E +M+ + H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 452 KVIS-SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+I E ++L YM HG L +++ S + ++ + VA +EYL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AE 142
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT--IGYMAPEYGKE 568
+ +H DL N +LD++ ++DFG+A+ + + ++Q A + + A E +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 569 GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628
R + DV+SFG++L E TR P +H +DP L+
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAP---------PYRH-------------IDPFDLT-- 238
Query: 629 DINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675
+F+A+ E C ++ V +C P R + +V ++ +I +LL
Sbjct: 239 --HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 398 NLIGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIK 452
+IG G FG V +L E+ + + L+ G + + F E +M H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ + ++ E+M +GSL+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMN 155
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA-----TIGYMAPEYGK 567
+H DL N+L++ N+V +SDFG+++ L ED ++ T T A I + APE +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 568 EGRVSANGDVYSFGIMLMETFT 589
+ ++ DV+S+GI++ E +
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMS 235
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 59/310 (19%)
Query: 392 DGFSENNLIGRGSFGSVF--------KARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMM 442
D + +G G+FG V K + + + VA+K+ + + E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 443 KSI-RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQR----- 491
K I +H+NII ++ +C+ + +++ Y G+L +YL + Y DI +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 492 -----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546
++ +A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK------PTDEIFNG 600
T + +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK- 270
Query: 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660
L +E C + ++ + +C P QR
Sbjct: 271 ------------------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 661 KEIVTKLLKI 670
K++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G GS+GSV+KA G VA+K ++ + E +M+ +++K S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+V+EY GS+ + N L + I+ LEYLHF + IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDI 151
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K N+LL+ A L+DFG+A LT D + + T +MAPE +E + D++
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638
S GI +E K P +I N P T P L S +FV
Sbjct: 210 SLGITAIEMAEGKPPYADIHPMRAIFMIPTN---PPPT--FRKPELWSDNFTDFVK---- 260
Query: 639 VSFVFNVAMECTVESPEQRINAKEIV 664
+C V+SPEQR A +++
Sbjct: 261 ---------QCLVKSPEQRATATQLL 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 13/220 (5%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMK 443
LE D + ++G+G++G V+ R L + + +A+K + R + E + K
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 444 SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMI-DVASA 501
++H+NI++ + S S F + +E +P GSL L S + D Q + +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
L+YLH Q++H D+K NVL++ + V +SDFG +K L + T +T T T+ Y
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFT-GTLQY 175
Query: 561 MAPEY---GKEGRVSANGDVYSFGIMLMETFTRKKPTDEI 597
MAPE G G A D++S G ++E T K P E+
Sbjct: 176 MAPEIIDKGPRGYGKA-ADIWSLGCTIIEMATGKPPFYEL 214
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV-FKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G FG V+ + +VA+K L+ G + ++F E +MK+++H ++++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFGYSAQVIHCD 517
EE ++ E+M GSL +L S + +L + +A + Y+ IH D
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 134
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
L+ +NVL+ ++++ ++DFG+A+++ +++ T + I + APE G + +V
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 578 YSFGIMLMETFTRKK 592
+SFGI+L E T K
Sbjct: 194 WSFGILLYEIVTYGK 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 38/260 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
+G G FG V+ A +VA+K V ++F E +MK+++H ++K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCDL 518
E ++ E+M GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
+ +N+L+ ++V ++DFG+A++ + I + APE G + DV+
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIKSDVW 353
Query: 579 SFGIMLMETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQ 637
SFGI+LME T + P + N E+ L R E
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEVI-------------------RALER-GYRMPRPEN 393
Query: 638 CVSFVFNVAMECTVESPEQR 657
C ++N+ M C PE+R
Sbjct: 394 CPEELYNIMMRCWKNRPEER 413
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 8/219 (3%)
Query: 376 EAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKS 434
E ++++ S + + ++ IG+G+ G+V+ A + G EVA++ NLQ +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL 63
Query: 435 FDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI 494
E +M+ ++ NI+ + S + +V+EY+ GSL + + +D Q +
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAV 121
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
+ ALE+LH S QVIH D+K N+LL + L+DFG +T E ++
Sbjct: 122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXM 176
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ T +MAPE D++S GIM +E + P
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 8/219 (3%)
Query: 376 EAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKS 434
E ++++ S + + ++ IG+G+ G+V+ A + G EVA++ NLQ +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL 63
Query: 435 FDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI 494
E +M+ ++ NI+ + S + +V+EY+ GSL + + +D Q +
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAV 121
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
+ ALE+LH S QVIH D+K N+LL + L+DFG +T E ++
Sbjct: 122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTM 176
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ T +MAPE D++S GIM +E + P
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 8/219 (3%)
Query: 376 EAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKS 434
E ++++ S + + ++ IG+G+ G+V+ A + G EVA++ NLQ +
Sbjct: 5 EILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL 64
Query: 435 FDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI 494
E +M+ ++ NI+ + S + +V+EY+ GSL + + +D Q +
Sbjct: 65 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAV 122
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
+ ALE+LH S QVIH D+K N+LL + L+DFG +T E ++
Sbjct: 123 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXM 177
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ T +MAPE D++S GIM +E + P
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 367 PPNDANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGME--VAM 421
P AN + + R+F EL + ++G G FG+V K G+ ++ V +
Sbjct: 16 PSEKAN---KVLARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCI 65
Query: 422 KVFNLQYGRVFKSFDVECEMM---KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKY 478
KV + GR +SF + M S+ H +I++++ C + LV +Y+P GSL +
Sbjct: 66 KVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDH 122
Query: 479 LHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 538
+ L LN + +A + YL ++H +L NVLL ++DFG+
Sbjct: 123 VRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGV 179
Query: 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
A LL +D+ + ++ I +MA E G+ + DV+S+G+ + E T
Sbjct: 180 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 110/234 (47%), Gaps = 45/234 (19%)
Query: 399 LIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
LIGRG +G+V+K L D VA+KVF+ + F + + + + H NI + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFI--VG 75
Query: 459 NEEFKA-------LVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASALEYLHF-- 507
+E A LV+EY P+GSL KYL H+S+++ + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWV----SSCRLAHSVTRGLAYLHTEL 131
Query: 508 ----GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT--------REDQSTIQTQTL 555
Y + H DL NVL+ ++ +SDFG++ LT ED + I +
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI--SEV 189
Query: 556 ATIGYMAPEYGKEGRVSANG--------DVYSFGIMLMETFTRKKPTDEIFNGE 601
TI YMAPE EG V+ D+Y+ G++ E F R ++F GE
Sbjct: 190 GTIRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMR---CTDLFPGE 239
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 13/220 (5%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMK 443
LE D + ++G+G++G V+ R L + + +A+K + R + E + K
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 444 SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMI-DVASA 501
++H+NI++ + S S F + +E +P GSL L S + D Q + +
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
L+YLH Q++H D+K NVL++ + V +SDFG +K L + T +T T T+ Y
Sbjct: 135 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFT-GTLQY 189
Query: 561 MAPEY---GKEGRVSANGDVYSFGIMLMETFTRKKPTDEI 597
MAPE G G A D++S G ++E T K P E+
Sbjct: 190 MAPEIIDKGPRGYGKA-ADIWSLGCTIIEMATGKPPFYEL 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 27/207 (13%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGME-VAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+++ +IG GSFG V++A+L D E VA+K + G+ FK + E ++M+ + H NI++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 453 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 504 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
Y+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYR 189
Query: 562 APE--YGKEGRVSANGDVYSFGIMLME 586
APE +G S+ DV+S G +L E
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 376 EAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGME--VAMKVFNLQYGR 430
+ + R+F EL + ++G G FG+V K G+ ++ V +KV + GR
Sbjct: 4 KVLARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR 56
Query: 431 VFKSFDVECEMM---KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+SF + M S+ H +I++++ C + LV +Y+P GSL ++ L
Sbjct: 57 --QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALG 113
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL ++H +L NVLL ++DFG+A LL +D+
Sbjct: 114 PQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ ++ I +MA E G+ + DV+S+G+ + E T
Sbjct: 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 397 NNLIGRGSFGSVFKARLGD----GMEVAMKVFNLQYGR---VFKSFDVECEMMKSIRHRN 449
+ +G G+FG K ++G+ G +VA+K+ N Q R V E + +K RH +
Sbjct: 16 GDTLGVGTFG---KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
IIK+ S +V+EY+ G L Y+ + ++ R + + SA++Y H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH--- 128
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG 569
V+H DLKP NVLLD +M A ++DFG++ +++ D ++T + + Y APE G
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRT-SCGSPNYAAPEV-ISG 184
Query: 570 RVSANG--DVYSFGIMLMETFTRKKPTDE 596
R+ A D++S G++L P D+
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 394 FSENNL-----IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR- 446
F NNL +G G+FG V +A G G E A+ ++ + D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 447 ------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 500
H NI+ ++ +C++ ++ EY +G L +L + +L+ I AS
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 501 ALEYLHFGYSAQV------------IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548
+ LHF S+QV IH D+ NVLL + VA + DFG+A+ + +
Sbjct: 163 TRDLLHF--SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 379 QRMFSYLELCRATDGFSENNL-----IGRGSFGSVFKARLGDGME------VAMKVFNLQ 427
QRM L + + NN+ IG G+FG VF+AR + VA+K+ +
Sbjct: 29 QRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE 88
Query: 428 YGRVFKS-FDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN--- 483
++ F E +M + NI+K++ C+ + L+ EYM +G L ++L S +
Sbjct: 89 ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHT 148
Query: 484 --------------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNV 523
L ++L I VA+ + YL + +H DL N
Sbjct: 149 VCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNC 205
Query: 524 LLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 583
L+ +NMV ++DFG+++ + D I +M PE R + DV+++G++
Sbjct: 206 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV 265
Query: 584 LMETFT 589
L E F+
Sbjct: 266 LWEIFS 271
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 27/207 (13%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGME-VAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+++ +IG GSFG V++A+L D E VA+K + G+ FK + E ++M+ + H NI++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 453 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 504 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
Y+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYR 189
Query: 562 APE--YGKEGRVSANGDVYSFGIMLME 586
APE +G S+ DV+S G +L E
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 27/207 (13%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGME-VAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+++ +IG GSFG V++A+L D E VA+K + G+ FK + E ++M+ + H NI++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 453 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 504 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
Y+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYR 189
Query: 562 APE--YGKEGRVSANGDVYSFGIMLME 586
APE +G S+ DV+S G +L E
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 398 NLIGRGSFGSVFKARL----GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNII 451
++G G FGSV + L G ++VA+K L R + F E MK H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 452 KVISSCSNEEFKAL-----VLEYMPHGSLEKYLHSSNY-----ILDIYQRLNIMIDVASA 501
+++ C + + +L +M +G L YL S + + L M+D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+EYL + +H DL N +L D+M ++DFG++K + D + ++
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 562 APEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEM 602
A E + ++ DV++FG+ + E TR P + N EM
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G + K L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYC 129
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T+ T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEM 177
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 397 NNLIGRGSFGSVFKARLGD----GMEVAMKVFNLQYGR---VFKSFDVECEMMKSIRHRN 449
+ +G G+FG K ++G+ G +VA+K+ N Q R V E + +K RH +
Sbjct: 16 GDTLGVGTFG---KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
IIK+ S +V+EY+ G L Y+ + ++ R + + SA++Y H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH--- 128
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG 569
V+H DLKP NVLLD +M A ++DFG++ +++ + + Y APE G
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS---DGEFLRDSCGSPNYAAPEV-ISG 184
Query: 570 RVSANG--DVYSFGIMLMETFTRKKPTDE 596
R+ A D++S G++L P D+
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 177
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 203
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 204 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQ-------YGRVFKSFDVECEMMK 443
+ F NL+G+GSF V++A + G+EVA+K+ + + RV + C++
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-- 68
Query: 444 SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+H +I+++ + + + LVLE +G + +YL + + + M + + +
Sbjct: 69 --KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT--REDQSTIQTQTLATIGYM 561
YLH S ++H DL SN+LL NM ++DFG+A L E T+ T Y+
Sbjct: 127 YLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL----CGTPNYI 179
Query: 562 APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTD 595
+PE DV+S G M + P D
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEM 177
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 123
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 124 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 176
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 177 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 398 NLIGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIK 452
+IG G FG V +L E+ + + L+ G + + F E +M H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ + ++ E+M +GSL+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMN 129
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA-----TIGYMAPEYGK 567
+H L N+L++ N+V +SDFG+++ L ED ++ T T A I + APE +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 568 EGRVSANGDVYSFGIMLMETFT 589
+ ++ DV+S+GI++ E +
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 178
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 179 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 128
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 129 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 182 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 182
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 11/205 (5%)
Query: 406 GSVFKARLGDGMEVAMKVFNLQYGRVFKS--FDVECEMMKSIRHRNIIKVISSCSNEE-- 461
G ++K R G ++ +KV ++ KS F+ EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 462 FKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKP 520
L+ +MP+GSL LH +N+++D Q + +D+A + +LH H L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNS 141
Query: 521 SNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSF 580
+V++D++M A +S + QS + A + A + E + D++SF
Sbjct: 142 RSVMIDEDMTARISMADVKFSF----QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197
Query: 581 GIMLMETFTRKKPTDEIFNGEMTLK 605
++L E TR+ P ++ N E+ +K
Sbjct: 198 AVLLWELVTREVPFADLSNMEIGMK 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 32/224 (14%)
Query: 387 LCRATDGFSENNLIGRGSFGSVFKAR--LGDGMEVAMKVFNLQYGRVFKSFDVECEM--- 441
LCRA + IG G++G VFKAR G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 442 --MKSIRHRNIIKVISSCS----NEEFK-ALVLEYMPHGSLEKYLHS-------SNYILD 487
+++ H N++++ C+ + E K LV E++ L YL + I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
+ M + L++LH S +V+H DLKP N+L+ + L+DFG+A++ + +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591
T + T+ Y APE + + D++S G + E F RK
Sbjct: 174 -MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 141
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 142 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 194
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 195 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGME-VAMKVFNLQYGR-----VFKSFDVECEMMKSIRH 447
+ + + +G G F +V+KAR + + VA+K L + + ++ E ++++ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NII ++ + ++ +LV ++M LE + ++ +L M+ LEYLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
+ ++H DLKP+N+LLD+N V L+DFG+AK +++ + T Y APE
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVTRWYRAPELLF 185
Query: 568 EGRVSANG-DVYSFGIMLMETFTR 590
R+ G D+++ G +L E R
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLR 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G + K L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYC 129
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEM 182
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 394 FSENNL-----IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR- 446
F NNL +G G+FG V +A G G E A+ ++ + D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 447 ------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 500
H NI+ ++ +C++ ++ EY +G L +L + +L+ I S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 501 ALEYLHFGYSAQV------------IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548
+ LHF S+QV IH D+ NVLL + VA + DFG+A+ + +
Sbjct: 163 TRDLLHF--SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 121
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 122 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 174
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 175 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 32/224 (14%)
Query: 387 LCRATDGFSENNLIGRGSFGSVFKAR--LGDGMEVAMKVFNLQYGRVFKSFDVECEM--- 441
LCRA + IG G++G VFKAR G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 442 --MKSIRHRNIIKVISSCS----NEEFK-ALVLEYMPHGSLEKYLHS-------SNYILD 487
+++ H N++++ C+ + E K LV E++ L YL + I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
+ M + L++LH S +V+H DLKP N+L+ + L+DFG+A++ + +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591
T + T+ Y APE + + D++S G + E F RK
Sbjct: 174 -MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 86
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 145
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 146 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRA 198
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 199 PELIFGATDYTSSI-DVWSAGCVLAE 223
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPE- 181
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR D++S G++ E K P
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 32/224 (14%)
Query: 387 LCRATDGFSENNLIGRGSFGSVFKAR--LGDGMEVAMKVFNLQYGRVFKSFDVECEM--- 441
LCRA + IG G++G VFKAR G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 442 --MKSIRHRNIIKVISSCS----NEEFK-ALVLEYMPHGSLEKYLHS-------SNYILD 487
+++ H N++++ C+ + E K LV E++ L YL + I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
+ M + L++LH S +V+H DLKP N+L+ + L+DFG+A++ + +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591
T + T+ Y APE + + D++S G + E F RK
Sbjct: 174 -MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 25/207 (12%)
Query: 393 GFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 453 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 504 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
Y+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYR 189
Query: 562 APE--YGKEGRVSANGDVYSFGIMLME 586
APE +G S+ DV+S G +L E
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 97
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 156
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 157 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRA 209
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 210 PELIFGATDYTSSI-DVWSAGCVLAE 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 112
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 171
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRA 224
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 225 PELIFGATDYTSSI-DVWSAGCVLAE 249
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 400 IGRGSFGSVFKARLGDGME------VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+G+GSFG V++ D ++ VA+K N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD---------IYQRLNIMIDVASALE 503
++ S + +V+E M HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 25/207 (12%)
Query: 393 GFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 453 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 504 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
Y+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYR 189
Query: 562 APE--YGKEGRVSANGDVYSFGIMLME 586
APE +G S+ DV+S G +L E
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 90
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 149
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRA 202
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 203 PELIFGATDYTSSI-DVWSAGCVLAE 227
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 25/207 (12%)
Query: 393 GFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 78
Query: 453 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 137
Query: 504 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
Y+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y
Sbjct: 138 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYR 190
Query: 562 APE--YGKEGRVSANGDVYSFGIMLME 586
APE +G S+ DV+S G +L E
Sbjct: 191 APELIFGATDYTSSI-DVWSAGCVLAE 216
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 82
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 141
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 142 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRA 194
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 195 PELIFGATDYTSSI-DVWSAGCVLAE 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 134/311 (43%), Gaps = 66/311 (21%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
+G+G +G V++ G VA+K+F+ R KS+ E E+ ++ RH NI+ I+S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH---FGYS 510
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT-----LATIGYMAP 563
+ + H DLK N+L+ N ++D G+A + QST Q + T YMAP
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 564 EYGKE----------GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
E E RV D+++FG++L E R + NG V D+ P
Sbjct: 216 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEVARRM-----VSNGI------VEDYKP 260
Query: 614 ISTKEIVDPNLLSREDINFVA--------------KEQCVSFVFNVAMECTVESPEQRIN 659
V PN S ED+ V + ++ + + EC ++P R+
Sbjct: 261 PFYD--VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
Query: 660 AKEIVTKLLKI 670
A I L KI
Sbjct: 319 ALRIKKTLTKI 329
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 90
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 149
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRA 202
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 203 PELIFGATDYTSSI-DVWSAGCVLAE 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 400 IGRGSFGSVFKARLGDGME------VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+G+GSFG V++ D ++ VA+K N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD---------IYQRLNIMIDVASALE 503
++ S + +V+E M HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 106
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 165
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 166 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRA 218
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 219 PELIFGATDYTSSI-DVWSAGCVLAE 243
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG+G+ G+V+ A + G EVA++ NLQ + E +M+ ++ NI+ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ +V+EY+ GSL + + +D Q + + ALE+LH S QVIH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K N+LL + L+DFG +T E ++ + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 579 SFGIMLMETFTRKKP 593
S GIM +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSIRH 447
+ F +G+G FG+V+ AR + A+KV L+ V E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ + L+LEY P G++ + L + D + + ++A+AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH- 129
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
S +VIH D+KP N+LL N ++DFG + S+ +T T+ Y+ PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-I 182
Query: 568 EGRVSANG-DVYSFGIMLME 586
EGR+ D++S G++ E
Sbjct: 183 EGRMHDEKVDLWSLGVLCYE 202
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 83
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 142
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 143 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRA 195
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 196 PELIFGATDYTSSI-DVWSAGCVLAE 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 112
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 171
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRA 224
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 225 PELIFGATDYTSSI-DVWSAGCVLAE 249
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 116
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 175
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 176 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRA 228
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 229 PELIFGATDYTSSI-DVWSAGCVLAE 253
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 114
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 173
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 174 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRA 226
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 227 PELIFGATDYTSSI-DVWSAGCVLAE 251
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEM 178
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 179 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 400 IGRGSFGSVFKARLGDGME------VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+G+GSFG V++ D ++ VA+K N R F E +MK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD---------IYQRLNIMIDVASALE 503
++ S + +V+E M HG L+ YL S + + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 240
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 25/207 (12%)
Query: 393 GFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 453 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 504 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
Y+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYR 189
Query: 562 APE--YGKEGRVSANGDVYSFGIMLME 586
APE +G S+ DV+S G +L E
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 157
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 216
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 217 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRA 269
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 270 PELIFGATDYTSSI-DVWSAGCVLAE 294
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 91
Query: 454 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 150
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 151 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRA 203
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 204 PELIFGATDYTSSI-DVWSAGCVLAE 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + + A+KV L+ V E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 125 H---SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 134/311 (43%), Gaps = 66/311 (21%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
+G+G +G V++ G VA+K+F+ R KS+ E E+ ++ RH NI+ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH---FGYS 510
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT-----LATIGYMAP 563
+ + H DLK N+L+ N ++D G+A + QST Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 564 EYGKE----------GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
E E RV D+++FG++L E R + NG V D+ P
Sbjct: 187 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEVARRM-----VSNGI------VEDYKP 231
Query: 614 ISTKEIVDPNLLSREDINFVA--------------KEQCVSFVFNVAMECTVESPEQRIN 659
V PN S ED+ V + ++ + + EC ++P R+
Sbjct: 232 PFYD--VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
Query: 660 AKEIVTKLLKI 670
A I L KI
Sbjct: 290 ALRIKKTLTKI 300
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 398 NLIGRGSFGSVFKARLGD----GMEVAMKVFNLQYGR---VFKSFDVECEMMKSIRHRNI 450
+ +G G+FG K ++G G +VA+K+ N Q R V E + +K RH +I
Sbjct: 22 DTLGVGTFG---KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 451 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
IK+ S +V+EY+ G L Y+ N LD + + + S ++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCH---R 134
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR 570
V+H DLKP NVLLD +M A ++DFG++ +++ + + Y APE GR
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS---DGEFLRXSCGSPNYAAPEV-ISGR 190
Query: 571 VSANG--DVYSFGIMLMETFTRKKPTDE 596
+ A D++S G++L P D+
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 384 YLELCRATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSF-DVECEM 441
Y + + F++ IG+GSFG VFK +V A+K+ +L+ E +
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ + K S + +++EY+ GS L LD Q I+ ++
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKG 136
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
L+YLH S + IH D+K +NVLL ++ L+DFG+A LT D + + T +M
Sbjct: 137 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWM 191
Query: 562 APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEI 597
APE K+ + D++S GI +E + P E+
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 25/206 (12%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+++ +IG GSFG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 78
Query: 454 ----ISSCSNEE--FKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
SS ++ + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 505 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+H FG + H D+KP N+LLD D V L DFG AK L R + + + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRA 190
Query: 563 PE--YGKEGRVSANGDVYSFGIMLME 586
PE +G S+ DV+S G +L E
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEM 180
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 180
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 134/311 (43%), Gaps = 66/311 (21%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
+G+G +G V++ G VA+K+F+ R KS+ E E+ ++ RH NI+ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH---FGYS 510
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT-----LATIGYMAP 563
+ + H DLK N+L+ N ++D G+A + QST Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 564 EYGKE----------GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
E E RV D+++FG++L E R + NG V D+ P
Sbjct: 187 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEVARRM-----VSNGI------VEDYKP 231
Query: 614 ISTKEIVDPNLLSREDINFVA--------------KEQCVSFVFNVAMECTVESPEQRIN 659
V PN S ED+ V + ++ + + EC ++P R+
Sbjct: 232 PFYD--VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
Query: 660 AKEIVTKLLKI 670
A I L KI
Sbjct: 290 ALRIKKTLTKI 300
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSF-DVECEMMKSIRHRNII 451
F++ IG+GSFG VFK +V A+K+ +L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SE 123
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+ IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE K+
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEI 597
+ D++S GI +E + P E+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + + T+ T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL----CGTLDYLPPEM 178
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 179 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEM 203
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 204 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSF-DVECEMMKSIRHRNII 451
F++ IG+GSFG VFK +V A+K+ +L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SE 123
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+ IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE K+
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEI 597
+ D++S GI +E + P E+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 126
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 184
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 240
Query: 627 RED 629
D
Sbjct: 241 MPD 243
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSF-DVECEMMKSIRHRNII 451
F++ IG+GSFG VFK +V A+K+ +L+ E ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SE 138
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+ IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE K+
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEI 597
+ D++S GI +E + P E+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSEL 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 246
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 247 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 294
Query: 674 LLRNV 678
R V
Sbjct: 295 GFREV 299
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL +++FG + S+ +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 177
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 126
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 184
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 240
Query: 627 RED 629
D
Sbjct: 241 MPD 243
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 179
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 180 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 627 RED 629
D
Sbjct: 234 MPD 236
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL +++FG + S+ +T T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEM 179
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 180 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLSFC 119
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 627 RED 629
D
Sbjct: 234 MPD 236
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 400 IGRGSFGSVFKARLGDGME------VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+G+GSFG V++ D ++ VA+K N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD---------IYQRLNIMIDVASALE 503
++ S + +V+E M HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 627 RED 629
D
Sbjct: 234 MPD 236
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 176
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 627 RED 629
D
Sbjct: 233 MPD 235
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSI 445
A + F +G+G FG+V+ AR + A+KV L+ V E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
RH NI+++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 180
Query: 566 GKEGRVSANG-DVYSFGIMLMETFTRKKP 593
EGR+ D++S G++ E K P
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 153/349 (43%), Gaps = 44/349 (12%)
Query: 352 VVIFLIVKCRKRERGPPND----ANMPPEAMQRMFSYL--ELCRATDGFSENNLIGRGSF 405
+VI L V RKR + A++ PE Y+ E A + + + +G+GSF
Sbjct: 1 LVIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSF 60
Query: 406 GSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCS 458
G V+ K + D E VA+K N R F E +MK ++++++ S
Sbjct: 61 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 120
Query: 459 NEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASALEYLHFGY 509
+ +++E M G L+ YL S +N +L + + + + ++A + YL+
Sbjct: 121 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--- 177
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG 569
+ + +H DL N ++ ++ + DFG+ + + D + L + +M+PE K+G
Sbjct: 178 ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG 237
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629
+ DV+SFG++L E T + + + E L+ +++ LL + D
Sbjct: 238 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD 285
Query: 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRNV 678
C +F + C +P+ R + EI++ + + + R V
Sbjct: 286 -------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 327
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 627 RED 629
D
Sbjct: 234 MPD 236
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 118
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEIL 176
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 625 LSRED 629
S D
Sbjct: 233 TSMPD 237
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVA----MKVFNLQYGRVFKSFDVECEMMKSIRHRN 449
FS+ IG GSFG+V+ AR EV M Q ++ E ++ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS----ALEYL 505
I+ E LV+EY L S++ +L+++++ +++A+ AL+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
+ +S +IH D+K N+LL + + L DFG A ++ + + T +MAPE
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEV 221
Query: 566 ---GKEGRVSANGDVYSFGIMLMETFTRKKP 593
EG+ DV+S GI +E RK P
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 176
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 627 RED 629
D
Sbjct: 233 MPD 235
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 39/321 (12%)
Query: 375 PEAMQRMFSYLELCRATDGFSENNLIGRGSFGSV-FKARLGDGMEVAMKVFNLQ-YGRVF 432
P+ + Y EL + IG G F V + G VA+K+ + G
Sbjct: 2 PKDYDELLKYYEL---------HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDL 52
Query: 433 KSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL 492
E E +K++RH++I ++ +VLEY P G L Y+ S + + + R+
Sbjct: 53 PRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV 112
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552
+ + SA+ Y+H S H DLKP N+L D+ L DFG+ +QT
Sbjct: 113 -VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
Query: 553 QTLATIGYMAPEYGK-EGRVSANGDVYSFGIMLMETFTRKKPTDE-----IFNGEMTLKH 606
++ Y APE + + + + DV+S GI+L P D+ ++ M K+
Sbjct: 169 -CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY 227
Query: 607 WVNDWLPIST-------------KEIVDPNLLSR----EDINFVAKEQCVSFVFNVAMEC 649
V WL S+ K I NLL+ +D N+ + Q + ++ +C
Sbjct: 228 DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDC 287
Query: 650 TVESPEQRINAKEIVTKLLKI 670
E N ++ + L+ +
Sbjct: 288 VTELSVHHRNNRQTMEDLISL 308
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
IG+G FG V++ + G EVA+K+F+ R +S+ E E+ +++ RH NI+ I++
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF---GYS 510
+ + LV +Y HGSL YL + Y + + + + + AS L +LH G
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-----IQTQTLATIGYMAP 563
+ + H DLK N+L+ N ++D G+A R D +T + T YMAP
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 564 EY------GKEGRVSANGDVYSFGIMLMETFTR 590
E K D+Y+ G++ E R
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 137/308 (44%), Gaps = 54/308 (17%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
+G+G +G V++ L G VA+K+F+ R +S+ E E+ ++ RH NI+ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH---FGYS 510
+ L+ Y HGSL +L L+ + L + + A L +LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTI-QTQTLATIGYMAPEYG 566
+ + H D K NVL+ N+ ++D G+A + ++ D I + T YMAPE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 567 KEGRVSAN-------GDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI 619
E ++ + D+++FG++L E R I NG V D+ P
Sbjct: 190 DE-QIRTDCFESYKWTDIWAFGLVLWEIARRT-----IVNGI------VEDYRPPFYD-- 235
Query: 620 VDPNLLSREDI--------------NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
V PN S ED+ N +A + +S + + EC +P R+ A I
Sbjct: 236 VVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKK 295
Query: 666 KLLKIRDS 673
L KI +S
Sbjct: 296 TLQKISNS 303
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 123
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 181
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 237
Query: 627 RED 629
D
Sbjct: 238 MPD 240
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
IG+G FG V++ + G EVA+K+F+ R +S+ E E+ +++ RH NI+ I++
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF---GYS 510
+ + LV +Y HGSL YL + Y + + + + + AS L +LH G
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-----IQTQTLATIGYMAP 563
+ + H DLK N+L+ N ++D G+A R D +T + T YMAP
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 564 EY------GKEGRVSANGDVYSFGIMLMETFTR 590
E K D+Y+ G++ E R
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENXYKAQTHG 174
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSIRH 447
+ F +G+G FG+V+ AR + A+KV L+ V E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ + L+LEY P G++ + L + D + + ++A+AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH- 129
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
S +VIH D+KP N+LL N ++DFG + + T+ T+ Y+ PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL----CGTLDYLPPEM-I 182
Query: 568 EGRVSANG-DVYSFGIMLME 586
EGR+ D++S G++ E
Sbjct: 183 EGRMHDEKVDLWSLGVLCYE 202
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
IG+G FG V++ + G EVA+K+F+ R +S+ E E+ +++ RH NI+ I++
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF---GYS 510
+ + LV +Y HGSL YL + Y + + + + + AS L +LH G
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-----IQTQTLATIGYMAP 563
+ + H DLK N+L+ N ++D G+A R D +T + T YMAP
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 564 EY------GKEGRVSANGDVYSFGIMLMETFTR 590
E K D+Y+ G++ E R
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
IG+G FG V++ + G EVA+K+F+ R +S+ E E+ +++ RH NI+ I++
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF---GYS 510
+ + LV +Y HGSL YL + Y + + + + + AS L +LH G
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-----IQTQTLATIGYMAP 563
+ + H DLK N+L+ N ++D G+A R D +T + T YMAP
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 564 EY------GKEGRVSANGDVYSFGIMLMETFTR 590
E K D+Y+ G++ E R
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 174
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 400 IGRGSFGSVFKARLGDGME------VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+G+GSFG V++ D ++ VA+K N R F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD---------IYQRLNIMIDVASALE 503
++ S + +V+E M HG L+ YL S + + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 242
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVA----MKVFNLQYGRVFKSFDVECEMMKSIRHRN 449
FS+ IG GSFG+V+ AR EV M Q ++ E ++ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS----ALEYL 505
I+ E LV+EY L S++ +L+++++ +++A+ AL+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
+ +S +IH D+K N+LL + + L DFG A ++ + + T +MAPE
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEV 182
Query: 566 ---GKEGRVSANGDVYSFGIMLMETFTRKKP 593
EG+ DV+S GI +E RK P
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 476
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 532
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
IG+G FG V++ + G EVA+K+F+ R +S+ E E+ +++ RH NI+ I++
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF---GYS 510
+ + LV +Y HGSL YL + Y + + + + + AS L +LH G
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-----IQTQTLATIGYMAP 563
+ + H DLK N+L+ N ++D G+A R D +T + T YMAP
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 564 EY------GKEGRVSANGDVYSFGIMLMETFTR 590
E K D+Y+ G++ E R
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISSC 457
IG+G FG V++ + G EVA+K+F+ R +S+ E E+ +++ RH NI+ I++
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 458 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF---GYS 510
+ + LV +Y HGSL YL + Y + + + + + AS L +LH G
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 511 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-----IQTQTLATIGYMAP 563
+ + H DLK N+L+ N ++D G+A R D +T + T YMAP
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 564 EY------GKEGRVSANGDVYSFGIMLMETFTR 590
E K D+Y+ G++ E R
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVF-NLQYGRVFKSFDV-ECEMMKSIRHRNIIKVISS 456
IG GS+G VFK R D G VA+K F + V K + E M+K ++H N++ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR---LNIMIDVA-SALEYLHFGYSAQ 512
+ LV EY H L + LD YQR +++ + L+ ++F +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE-------Y 565
IH D+KP N+L+ + V L DFG A+LLT S +AT Y +PE Y
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLT--GPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTL 604
G V A G V++ + + + K D+++ TL
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 112
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 113 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 168
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 169 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 477
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 478 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 533
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 534 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 114
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 170
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 130 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 239
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 240 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
Query: 674 LLRNV 678
R V
Sbjct: 288 GFREV 292
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 124
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 125 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 180
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 143 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 252
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 253 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
Query: 674 LLRNV 678
R V
Sbjct: 301 GFREV 305
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 132
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 133 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 188
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 189 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 246
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 247 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 294
Query: 674 LLRNV 678
R V
Sbjct: 295 GFREV 299
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 136 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 245
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 246 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 293
Query: 674 LLRNV 678
R V
Sbjct: 294 GFREV 298
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 143 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 252
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 253 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
Query: 674 LLRNV 678
R V
Sbjct: 301 GFREV 305
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 134 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 243
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 244 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 291
Query: 674 LLRNV 678
R V
Sbjct: 292 GFREV 296
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR---LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G+ + + + + V + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 627 RED 629
D
Sbjct: 234 MPD 236
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR---LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G+ + + + + V + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 176
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 627 RED 629
D
Sbjct: 233 MPD 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 133 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 242
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 243 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 290
Query: 674 LLRNV 678
R V
Sbjct: 291 GFREV 295
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 190
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
V+ ++YL + +H DL NVLL A +SDFG++K L R D++ + QT
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG 190
Query: 557 T--IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNGEMT 603
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 389 RATDGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVF-NLQYGRVFKSFDV-ECEMMKSI 445
++ + + L+G GS+G V K R D G VA+K F ++ K + E +++K +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPH---GSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
RH N++ ++ C ++ LV E++ H LE + + +Y + Q+ I +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY--QVVQKYLFQI-----I 134
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+ F +S +IH D+KP N+L+ + V L DFG A+ L + + +AT Y A
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRA 192
Query: 563 PE-------YGKEGRVSANGDVYSFGIMLMETF 588
PE YGK DV++ G ++ E F
Sbjct: 193 PELLVGDVKYGKA------VDVWAIGCLVTEMF 219
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K Y + F +E ++ H+NI++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 170 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 264
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 265 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 398 NLIGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSI-RHRN 449
++G G+FG V A + G ++VA+K+ + + + E +MM + H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHS-------------SNYILDIYQRLNIMI 496
I+ ++ +C+ L+ EY +G L YL S + L+ + LN++
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 497 ---------DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
VA +E+L F +H DL NVL+ V + DFG+A+ + +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
++ + +MAPE EG + DV+S+GI+L E F+
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 136 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 245
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 246 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 293
Query: 674 LLRNV 678
R V
Sbjct: 294 GFREV 298
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 34/231 (14%)
Query: 393 GFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
++ +IG GSFG VF+A+L + EVA+K LQ R FK + E ++M+ ++H N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKR-FK--NRELQIMRIVKHPNVVD 96
Query: 453 VIS------SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI------MIDVAS 500
+ + +E F LVLEY+P E +S + + Q + + M +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG 559
+L Y+H S + H D+KP N+LLD + V L DFG AK+L + + + +
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN---VSXICSRY 206
Query: 560 YMAPE--YGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWV 608
Y APE +G + N D++S G ++ E + +P +F GE + V
Sbjct: 207 YRAPELIFGATN-YTTNIDIWSTGCVMAE-LMQGQP---LFPGESGIDQLV 252
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G+FG V+KA+ + G A KV + + + VE E++ + H I+K++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
++ +++E+ P G+++ + + L Q I + LE L+F +S ++IH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT--LATIGYMAPEY-----GKEGRV 571
K NVL+ L+DFG+ + ++ T+Q + + T +MAPE K+
Sbjct: 136 KAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEI 597
D++S GI L+E + P E+
Sbjct: 192 DYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSF-DVECEMMKSIRHRNII 451
F++ IG+GSFG VFK +V A+K+ +L+ E ++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K S +++EY+ GS L + + D +Q ++ ++ L+YLH S
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH---SE 139
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+ IH D+K +NVLL + L+DFG+A LT D + + T +MAPE ++
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEI 597
+ D++S GI +E + P ++
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVI 454
LIG+G FG V+ R EVA+++ +++ K+F E + RH N++ +
Sbjct: 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+C + A++ +L + + +LD+ + I ++ + YLH + ++
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 515 HCDLKPSNVLLDDNMVAHLSDFG---IAKLLT---REDQSTIQTQTLATIGYMAPEY--- 565
H DLK NV D+ V ++DFG I+ +L RED+ IQ L ++APE
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLC---HLAPEIIRQ 208
Query: 566 ----GKEGRV--SANGDVYSFGIMLMETFTRKKP 593
+E ++ S + DV++ G + E R+ P
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 24/252 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
+G GSFG V A G +VA+K+ N L + + E ++ +RH +IIK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+EY + L Y+ + + + R + SA+EY H +++H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 135
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DLKP N+LLD+++ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 191
Query: 576 --DVYSFGIMLMETFTRKKPTDE---------IFNGEMTLKHWVNDWLPISTKEIVDPNL 624
DV+S G++L R+ P D+ I NG TL +++ K ++ N
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 251
Query: 625 LSREDINFVAKE 636
L+R I+ + ++
Sbjct: 252 LNRISIHEIMQD 263
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 24/252 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
+G GSFG V A G +VA+K+ N L + + E ++ +RH +IIK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+EY + L Y+ + + + R + SA+EY H +++H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 130
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DLKP N+LLD+++ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 186
Query: 576 --DVYSFGIMLMETFTRKKPTDE---------IFNGEMTLKHWVNDWLPISTKEIVDPNL 624
DV+S G++L R+ P D+ I NG TL +++ K ++ N
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 246
Query: 625 LSREDINFVAKE 636
L+R I+ + ++
Sbjct: 247 LNRISIHEIMQD 258
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 121
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 179
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 625 LSRED 629
S D
Sbjct: 236 TSMPD 240
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G+FG V+KA+ + G A KV + + + VE E++ + H I+K++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
++ +++E+ P G+++ + + L Q I + LE L+F +S ++IH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT--LATIGYMAPEY-----GKEGRV 571
K NVL+ L+DFG++ ++ T+Q + + T +MAPE K+
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSA----KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEI 597
D++S GI L+E + P E+
Sbjct: 200 DYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G+FG V+KA+ + + A KV + + + + VE +++ S H NI+K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
E +++E+ G+++ + L Q + AL YLH ++IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT--LATIGYMAPEY-----GKEGRV 571
K N+L + L+DFG++ TR TIQ + + T +MAPE K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTR----TIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEI 597
DV+S GI L+E + P E+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 120
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 625 LSRED 629
S D
Sbjct: 235 TSMPD 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 31/212 (14%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDV---------ECEMMKSIRHRN 449
IG G++G V AR G +VA+K ++ +FDV E +++K +H N
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 450 IIKVIS----SCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
II + + EFK++ VL+ M L + +HSS + + R + + L+
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRY-FLYQLLRGLK 173
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TREDQSTIQTQTLATIGYM 561
Y+H SAQVIH DLKPSN+L+++N + DFG+A+ L + + T+ +AT Y
Sbjct: 174 YMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 562 APEYGKE-GRVSANGDVYSFGIMLMETFTRKK 592
APE + D++S G + E R++
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 400 IGRGSFGSVFKARLGDGME------VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+G+GSFG V++ D ++ VA+K N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD---------IYQRLNIMIDVASALE 503
++ S + +V+E M HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
YL+ + + +H +L N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 400 IGRGSFGSVFKARLGDGME------VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+G+GSFG V++ D ++ VA+K N R F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD---------IYQRLNIMIDVASALE 503
++ S + +V+E M HG L+ YL S + + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
YL+ + + +H +L N ++ + + DFG+ + + D + L + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 244
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 120
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 625 LSRED 629
S D
Sbjct: 235 TSMPD 239
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 119
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 177
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 625 LSRED 629
S D
Sbjct: 234 TSMPD 238
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 24/252 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
+G GSFG V A G +VA+K+ N L + + E ++ +RH +IIK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+EY + L Y+ + + + R + SA+EY H +++H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 136
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DLKP N+LLD+++ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 192
Query: 576 --DVYSFGIMLMETFTRKKPTDE---------IFNGEMTLKHWVNDWLPISTKEIVDPNL 624
DV+S G++L R+ P D+ I NG TL +++ K ++ N
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 252
Query: 625 LSREDINFVAKE 636
L+R I+ + ++
Sbjct: 253 LNRISIHEIMQD 264
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 24/252 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
+G GSFG V A G +VA+K+ N L + + E ++ +RH +IIK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+EY + L Y+ + + + R + SA+EY H +++H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 126
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DLKP N+LLD+++ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 182
Query: 576 --DVYSFGIMLMETFTRKKPTDE---------IFNGEMTLKHWVNDWLPISTKEIVDPNL 624
DV+S G++L R+ P D+ I NG TL +++ K ++ N
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 242
Query: 625 LSREDINFVAKE 636
L+R I+ + ++
Sbjct: 243 LNRISIHEIMQD 254
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 119
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 177
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 625 LSRED 629
S D
Sbjct: 234 TSMPD 238
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 117
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 625 LSRED 629
S D
Sbjct: 232 TSMPD 236
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 135/305 (44%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 128 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 237
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C + + C +P+ R + EI++ + + +
Sbjct: 238 -----VMEGGLLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 285
Query: 674 LLRNV 678
R V
Sbjct: 286 GFREV 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLG 176
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 627 RED 629
D
Sbjct: 233 MPD 235
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 118
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 176
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 625 LSRED 629
S D
Sbjct: 233 TSMPD 237
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 119
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 177
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 625 LSRED 629
S D
Sbjct: 234 TSMPD 238
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 117
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 625 LSRED 629
S D
Sbjct: 232 TSMPD 236
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 117
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 625 LSRED 629
S D
Sbjct: 232 TSMPD 236
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 120
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLG 178
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 627 RED 629
D
Sbjct: 235 MPD 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 31/212 (14%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDV---------ECEMMKSIRHRN 449
IG G++G V AR G +VA+K ++ +FDV E +++K +H N
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 450 IIKVIS----SCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
II + + EFK++ VL+ M L + +HSS + + R + + L+
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRY-FLYQLLRGLK 172
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TREDQSTIQTQTLATIGYM 561
Y+H SAQVIH DLKPSN+L+++N + DFG+A+ L + + T+ +AT Y
Sbjct: 173 YMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 562 APEYGKE-GRVSANGDVYSFGIMLMETFTRKK 592
APE + D++S G + E R++
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 383 SYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG---RVFKSFD 436
+ L + + T+ F + ++G G+FG+V+K G+ +++ + + L+ + K
Sbjct: 11 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 69
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 401 GRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS---C 457
RG FG V+KA+L + VA+K+F LQ + ++S + E ++H N+++ I++
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 458 SNEEFK-ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF--------G 508
SN E + L+ + GSL YL + I+ + ++ ++ L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ + H D K NVLL ++ A L+DFG+A + T YMAPE E
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV-LE 198
Query: 569 GRVSANG------DVYSFGIMLMETFTRKKPTD 595
G ++ D+Y+ G++L E +R K D
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+K++ +S + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLG 176
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 627 RED 629
D
Sbjct: 233 MPD 235
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISSC 457
+G G++G V+KA+ G VA+K L + + E ++K + H NI+ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
+E LV E+M L+K L + L Q I I + L + + +++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-GKEGRVSANGD 576
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP+ + S + D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 577 VYSFGIMLMETFTRK 591
++S G + E T K
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 118
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 176
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 625 LSRED 629
S D
Sbjct: 233 TSMPD 237
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+K++ +S + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 117
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 625 LSRED 629
S D
Sbjct: 232 TSMPD 236
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISSC 457
+G G++G V+KA+ G VA+K L + + E ++K + H NI+ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
+E LV E+M L+K L + L Q I I + L + + +++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-GKEGRVSANGD 576
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP+ + S + D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 577 VYSFGIMLMETFTRK 591
++S G + E T K
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 394 FSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNL--------QYGRVFKSFDVECEMMKS 444
+ ++IGRG V + G E A+K+ + Q V ++ E +++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 445 IR-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALE 503
+ H +II +I S + F LV + M G L YL + L + +IM + A+
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVS 214
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
+LH + ++H DLKP N+LLDDNM LSDFG + L + + T GY+AP
Sbjct: 215 FLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL---EPGEKLRELCGTPGYLAP 268
Query: 564 E------------YGKEGRVSANGDVYSFGIML 584
E YGKE D+++ G++L
Sbjct: 269 EILKCSMDETHPGYGKE------VDLWACGVIL 295
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 6 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG 117
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 118 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 174
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 383 SYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG---RVFKSFD 436
+ L + + T+ F + ++G G+FG+V+K G+ +++ + + L+ + K
Sbjct: 10 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 68
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 383 SYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG---RVFKSFD 436
+ L + + T+ F + ++G G+FG+V+K G+ +++ + + L+ + K
Sbjct: 8 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 66
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 5 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 57
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 58 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG 116
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 117 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 173
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 174 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 383 SYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG---RVFKSFD 436
+ L + + T+ F + ++G G+FG+V+K G+ +++ + + L+ + K
Sbjct: 7 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 383 SYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG---RVFKSFD 436
+ L + + T+ F + ++G G+FG+V+K G+ +++ + + L+ + K
Sbjct: 41 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEIL 99
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN +
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 159 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 216 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 400 IGRGSFGSVFKARLGDGME------VAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452
+G+GSFG V++ D ++ VA+K N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD---------IYQRLNIMIDVASALE 503
++ S + +V+E M HG L+ YL S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
YL+ + + +H DL N ++ + + DFG+ + + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G+FG V+KA+ + + A KV + + + + VE +++ S H NI+K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
E +++E+ G+++ + L Q + AL YLH ++IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-----GKEGRVSA 573
K N+L + L+DFG++ TR Q + + T +MAPE K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 574 NGDVYSFGIMLMETFTRKKPTDEI 597
DV+S GI L+E + P E+
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 34/298 (11%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI--RHRNIIKVISS- 456
IG+G +G V+ + G +VA+KVF + S+ E E+ +++ RH NI+ I++
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 457 ---CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG-YSAQ 512
+ L+ +Y +GSL YL S+ LD L + S L +LH +S Q
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 513 ----VIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTREDQSTIQTQT-LATIGYMAPEYG 566
+ H DLK N+L+ N ++D G+A K ++ ++ I T + T YM PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 567 KEG------RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI-----S 615
E + D+YSFG++L E R+ + I E L + +D +P
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEV-ARRCVSGGIVE-EYQLPY--HDLVPSDPSYED 274
Query: 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+EIV L N + ++C+ + + EC +P R+ A + L K+ +S
Sbjct: 275 MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G+FG V+KA+ + + A KV + + + + VE +++ S H NI+K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
E +++E+ G+++ + L Q + AL YLH ++IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-----GKEGRVSA 573
K N+L + L+DFG++ TR Q + + T +MAPE K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 574 NGDVYSFGIMLMETFTRKKPTDEI 597
DV+S GI L+E + P E+
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHR 448
+ F + IG G++G V+KAR G VA+K L + V + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NI+K++ E LV E++ H L+ ++ +S + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASA-LTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+S +V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 176
Query: 569 GRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNLLS 626
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 627 RED 629
D
Sbjct: 233 MPD 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 4 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 56
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 115
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 116 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 394 FSENNL-----IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR- 446
F NNL +G G+FG V +A G G E A+ ++ + D + +M ++
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 447 ------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQR 491
H NI+ ++ +C++ ++ EY +G L +L L++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ + + ++
Sbjct: 155 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 398 NLIGRGSFGSVFKARLGDGMEV----AMKVFNLQYGRVFKSF--DVECEMMKSIRHRNII 451
++G+GSFG VF + G + AMKV +V +E +++ + H I+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI-MIDVASALEYLHFGYS 510
K+ + E L+L+++ G L + S ++ + + + ++A AL++LH S
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR 570
+I+ DLKP N+LLD+ L+DFG++K D T+ YMAPE
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 571 VSANGDVYSFGIMLMETFT 589
+ + D +SFG+++ E T
Sbjct: 203 HTQSADWWSFGVLMFEMLT 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 392 DGFSENNLIGRGSFGSV-FKARLGDGMEVAMKVFNLQYGRV-FKSFDVECEMMKSIRHRN 449
D F +G G+FG V G+E +K N +V + + E E++KS+ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY---ILDIYQRLNIMIDVASALEYLH 506
IIK+ + +V+E G L + + S+ L +M + +AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 507 FGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
S V+H DLKP N+L D + + DFG+A+L ++ S T T YMAP
Sbjct: 142 ---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAP 195
Query: 564 EYGKEGRVSANGDVYSFGIML 584
E K V+ D++S G+++
Sbjct: 196 EVFKRD-VTFKCDIWSAGVVM 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 11 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 122
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 123 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 398 NLIGRGSFGSVFKARLGDGMEV----AMKVFNLQYGRVFKSF--DVECEMMKSIRHRNII 451
++G+GSFG VF + G + AMKV +V +E +++ + H I+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI-MIDVASALEYLHFGYS 510
K+ + E L+L+++ G L + S ++ + + + ++A AL++LH S
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR 570
+I+ DLKP N+LLD+ L+DFG++K D T+ YMAPE
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 571 VSANGDVYSFGIMLMETFTRKKP 593
+ + D +SFG+++ E T P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 22/224 (9%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRHRNIIKVIS 455
+G GSFG V R +G AMKV + K + E M+ + H II++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ + + ++++Y+ G L L S + + +V ALEYLH S +I+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIY 129
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DLKP N+LLD N ++DFG AK + + T Y+APE + +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYV-----PDVTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 576 DVYSFGIMLMETFTRKKP---------TDEIFNGEMTLKHWVND 610
D +SFGI++ E P ++I N E+ + N+
Sbjct: 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNE 228
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 7 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 59
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 118
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 119 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 175
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 176 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 23/233 (9%)
Query: 375 PEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLGDG-MEVAMKVF---NLQYGR 430
P+ + R F+ D F +G+G FG+V+ AR VA+KV ++
Sbjct: 13 PDILTRHFT-------IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEG 65
Query: 431 VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQ 490
V E E+ + H NI+++ + + L+LEY P G L K L S D +
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC-TFDEQR 124
Query: 491 RLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550
IM ++A AL Y H +VIH D+KP N+LL ++DFG + ++
Sbjct: 125 TATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSV-----HAPSL 176
Query: 551 QTQTL-ATIGYMAPEYGKEGRV-SANGDVYSFGIMLMETFTRKKPTDEIFNGE 601
+ +T+ T+ Y+ PE EGR+ + D++ G++ E P + + E
Sbjct: 177 RRKTMCGTLDYLPPEM-IEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 4 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 56
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 115
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 116 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 398 NLIGRGSFGSVFKARLGDGMEV----AMKVFNLQYGRVFKSF--DVECEMMKSIRHRNII 451
++G+GSFG VF + G + AMKV +V +E +++ + H I+
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI-MIDVASALEYLHFGYS 510
K+ + E L+L+++ G L + S ++ + + + ++A AL++LH S
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH---S 145
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR 570
+I+ DLKP N+LLD+ L+DFG++K D T+ YMAPE
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 571 VSANGDVYSFGIMLMETFTRKKP 593
+ + D +SFG+++ E T P
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 6 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 117
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 118 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 174
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 10 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 62
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 63 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 121
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 122 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 178
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 179 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 7 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 59
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 118
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 119 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 175
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 176 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 383 SYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG---RVFKSFD 436
+ L + + T+ F + ++G G+FG+V+K G+ +++ + + L+ + K
Sbjct: 7 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 437 VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 496
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 7 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 59
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 118
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 119 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 175
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 176 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 12/229 (5%)
Query: 382 FSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG---RVFKSF 435
+ L + + T+ F + ++G G+FG+V+K G+ +++ + + L+ + K
Sbjct: 3 MALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 436 DVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM 495
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC 120
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
+ +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 121 VQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 29 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 81
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 82 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 140
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 141 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 197
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 198 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 254
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 12/226 (5%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG---RVFKSFDVE 438
L + + T+ F + ++G G+FG+V+K G+ +++ + + L+ + K E
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 439 CEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDV 498
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 499 ASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATI 558
A + YL +++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 121 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 559 GYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
+MA E + DV+S+G+ + E T KP D I E++
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+ ++ +S + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASA-LTGIPLPL-IKSYLFQLLQGLA 120
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 625 LSRED 629
S D
Sbjct: 235 TSMPD 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + F +E ++ + H+NI++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 170 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 264
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 265 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 394 FSENNL-----IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR- 446
F NNL +G G+FG V +A G G E A+ ++ + D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 447 ------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQR 491
H NI+ ++ +C++ ++ EY +G L +L L++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ + + ++
Sbjct: 163 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 14 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 66
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 67 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 125
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 126 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 182
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 183 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 6 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG 117
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG AKLL E++
Sbjct: 118 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 406 GSVFKARLGDGMEVAMKVFNLQYGRVFKS--FDVECEMMKSIRHRNIIKVISSCSNEE-- 461
G ++K R G ++ +KV ++ KS F+ EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 462 FKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKP 520
L+ + P+GSL LH +N+++D Q + +D A +LH H L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNS 141
Query: 521 SNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSF 580
+V +D++ A +S + QS + A + A + E + D +SF
Sbjct: 142 RSVXIDEDXTARISXADVKFSF----QSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSF 197
Query: 581 GIMLMETFTRKKPTDEIFNGEMTLK 605
++L E TR+ P ++ N E+ K
Sbjct: 198 AVLLWELVTREVPFADLSNXEIGXK 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFDVECEMMK 443
L++ + F + ++G+GSFG VF A + A+K L+ V DVEC M++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 68
Query: 444 ------SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMID 497
+ H + + + +E V+EY+ G L ++ S + D+ + +
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAE 127
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
+ L++LH S +++ DLK N+LLD + ++DFG+ K D T + T
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NEFCGT 182
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP-----TDEIFNGEMTLKHWVNDWL 612
Y+APE + + + D +SFG++L E + P +E+F+ + WL
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWL 242
Query: 613 PISTKEIV 620
K+++
Sbjct: 243 EKEAKDLL 250
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 8 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 60
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 61 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG 119
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG AKLL E++
Sbjct: 120 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 176
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 177 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + F +E ++ + H+NI++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 156 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 250
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 251 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 6 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG 117
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG AKLL E++
Sbjct: 118 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 134/305 (43%), Gaps = 38/305 (12%)
Query: 390 ATDGFSENNLIGRGSFGSVF----KARLGDGME--VAMKVFNLQYG-RVFKSFDVECEMM 442
A + + + +G+GSFG V+ K + D E VA+K N R F E +M
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLN 493
K ++++++ S + +++E M G L+ YL S +N +L + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
+ ++A + YL+ + + +H DL N + ++ + DFG+ + + D +
Sbjct: 130 MAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
L + +M+PE K+G + DV+SFG++L E T + + + E L+
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 239
Query: 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673
+++ LL + D C + + C +P+ R + EI++ + + +
Sbjct: 240 -----VMEGGLLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
Query: 674 LLRNV 678
R V
Sbjct: 288 GFREV 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ H L+ ++ +S + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASA-LTGIPLPL-IKSYLFQLLQGLA 117
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 625 LSRED 629
S D
Sbjct: 232 TSMPD 236
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + + F +E ++ H+NI++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 147 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 200
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 241
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 242 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 400 IGRGSFGSV-FKARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
+G GSFG V +VA+K + L+ + + E +K +RH +IIK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ +V+EY G L Y+ + + R + A+EY H +++H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH---RHKIVH 131
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
DLKP N+LLDDN+ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-INGKLYAGP 187
Query: 576 --DVYSFGIMLMETFTRKKPTDEIF 598
DV+S GI+L + P D+ F
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + + F +E ++ H+NI++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 155 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 249
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 250 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L Y LD+ + +++AL YL S + +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 192 ASDVWMFGVCMWE 204
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 14/203 (6%)
Query: 398 NLIGRGSFGSVFKARL----GDGMEVAMKVFNLQYGRVFKSF--DVECEMMKSIRHRNII 451
++G+GSFG VF R G AMKV +V +E +++ + H ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI-MIDVASALEYLHFGYS 510
K+ + E L+L+++ G L + S ++ + + + ++A L++LH S
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALGLDHLH---S 148
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR 570
+I+ DLKP N+LLD+ L+DFG++K D T+ YMAPE
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 571 VSANGDVYSFGIMLMETFTRKKP 593
S + D +S+G+++ E T P
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLP 229
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 397 NNLIGRGSFGSVFKA----RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNII 451
N ++G G FG V++ G+ + VA+K K F E +MK++ H +I+
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K+I EE +++E P+G L YL + L + + + + A+ YL S
Sbjct: 89 KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+H D+ N+L+ L DFG+++ + ED L I +M+PE R
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 203
Query: 572 SANGDVYSFGIMLMETFT 589
+ DV+ F + + E +
Sbjct: 204 TTASDVWMFAVCMWEILS 221
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + F +E ++ H+NI++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 156 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 250
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 251 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + + F +E ++ H+NI++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 196 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 290
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 291 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 394 FSENNLI-----GRGSFGSVFKA-------RLGDGMEVAMKVFNLQYG-RVFKSFDVECE 440
F NL+ G G FG V KA R G VA+K+ + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 441 MMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----------- 489
++K + H ++IK+ +CS + L++EY +GSL +L S + Y
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 490 -----QRLNIMID-------VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537
+R M D ++ ++YL +++H DL N+L+ + +SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+++ + ED ++Q + +MA E + + DV+SFG++L E T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + + F +E ++ H+NI++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 162 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 215
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 256
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 257 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++ G+FG+V+K G+ +++ + + L+
Sbjct: 11 PNQALLRILKETE-------FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG 122
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 123 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + + F +E ++ H+NI++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 172
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 173 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 267
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 268 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+K+ + L + K F E +MK + H NI+K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ LV+EY G + YL + ++ + R + SA++Y H + ++H
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVH 129
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA-N 574
DLK N+LLD +M ++DFG + T ++ + Y APE + +
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 186
Query: 575 GDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 187 VDVWSLGVILYTLVSGSLPFD 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 397 NNLIGRGSFGSVFKA----RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNII 451
N ++G G FG V++ G+ + VA+K K F E +MK++ H +I+
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K+I EE +++E P+G L YL + L + + + + A+ YL S
Sbjct: 73 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 128
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+H D+ N+L+ L DFG+++ + ED L I +M+PE R
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 187
Query: 572 SANGDVYSFGIMLMETFT 589
+ DV+ F + + E +
Sbjct: 188 TTASDVWMFAVCMWEILS 205
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + + F +E ++ H+NI++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 172 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 225
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 266
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 267 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L + LD+ + +++AL YL S + +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 192 ASDVWMFGVCMWE 204
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 397 NNLIGRGSFGSVFKA----RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNII 451
N ++G G FG V++ G+ + VA+K K F E +MK++ H +I+
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
K+I EE +++E P+G L YL + L + + + + A+ YL S
Sbjct: 77 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 132
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+H D+ N+L+ L DFG+++ + ED L I +M+PE R
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 191
Query: 572 SANGDVYSFGIMLMETFT 589
+ DV+ F + + E +
Sbjct: 192 TTASDVWMFAVCMWEILS 209
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + F +E ++ H+NI++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 156 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLP 209
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 250
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 251 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKA-RLGDG----MEVAMKVFNLQY 428
P +A+ R+ EL + ++G G+FG+V+K + DG + VA+KV
Sbjct: 6 PNQALLRILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT 58
Query: 429 G-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M + + +++ C + LV + MP+G L ++ + L
Sbjct: 59 SPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLG 117
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+A+LL ++
Sbjct: 118 SQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKH 606
I +MA E R + DV+S+G+ + E T KP D
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG---------- 224
Query: 607 WVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666
I +EI P+LL + + C V+ + ++C + E R +E+V++
Sbjct: 225 -------IPAREI--PDLLEKGE-RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSE 274
Query: 667 LLKI 670
++
Sbjct: 275 FSRM 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 391 TDGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRH 447
+D + +G+G+F V + G+E A K+ N + R F+ + E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ S E F LV + + G L + + + + Y + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 120
Query: 508 GYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+S ++H +LKP N+LL L+DFG+A + S T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPE 177
Query: 565 YGKEGRVSANGDVYSFGIML 584
K+ S D+++ G++L
Sbjct: 178 VLKKDPYSKPVDIWACGVIL 197
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 31/224 (13%)
Query: 394 FSENNL-----IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR- 446
F NNL +G G+FG V +A G G E A+ ++ + D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 447 ------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYI 485
H NI+ ++ +C++ ++ EY +G L +L H+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 486 LDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545
L L+ VA + +L S IH D+ NVLL + VA + DFG+A+ + +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 399 LIGR-GSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
+IG G FG V+KA+ + + A KV + + + + VE +++ S H NI+K++ +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
E +++E+ G+++ + L Q + AL YLH ++IH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 132
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT--LATIGYMAPEY-----GKEG 569
DLK N+L + L+DFG++ TR + IQ + + T +MAPE K+
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTR---TXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 570 RVSANGDVYSFGIMLMETFTRKKPTDEI 597
DV+S GI L+E + P E+
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 11 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 122
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG AKLL E++
Sbjct: 123 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 179
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 4 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 56
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 115
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG AKLL E++
Sbjct: 116 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 172
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 22/212 (10%)
Query: 401 GRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS---- 456
RG FG V+KA+L + VA+K+F +Q + +++ + E + ++H NI++ I +
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF-------GY 509
S + L+ + GSL +L ++ ++ + +I +A L YLH G+
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG 569
+ H D+K NVLL +N+ A ++DFG+A + + T YMAPE EG
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV-LEG 207
Query: 570 RVSANG------DVYSFGIMLMETFTRKKPTD 595
++ D+Y+ G++L E +R D
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + + F +E ++ H+NI++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + +++E M G L+ +L SS +LD+ L++ D+A +
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 155 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 249
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 250 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSIRH 447
D F +G+G FG+V+ AR + A+KV L+ V E E+ +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ + + + L+LE+ P G L K L D + M ++A AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 132
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
+VIH D+KP N+L+ ++DFG + S + T+ Y+ PE +
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTD 595
D++ G++ E P D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVFNLQYGRVFK-SFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + F +E ++ H+NI++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + +++E M G L+ +L SS +LD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 170 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 264
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 265 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 394 FSENNLI-----GRGSFGSVFKA-------RLGDGMEVAMKVFNLQYG-RVFKSFDVECE 440
F NL+ G G FG V KA R G VA+K+ + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 441 MMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----------- 489
++K + H ++IK+ +CS + L++EY +GSL +L S + Y
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 490 -----QRLNIMID-------VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537
+R M D ++ ++YL +++H DL N+L+ + +SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+++ + ED ++Q + +MA E + + DV+SFG++L E T
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L Y LD+ + +++AL YL S + +
Sbjct: 106 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 574 NGDVYSFGIMLMETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 220 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 264
Query: 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
C ++++ +C P +R E+ +L I
Sbjct: 265 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++G G+FG+V+K G+ +++ + + L+
Sbjct: 6 PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 117
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG AKLL E++
Sbjct: 118 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 400 IGRGSFGSVFKARLG------DGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIK 452
+G G+FG V++ ++ ++VA+K + + F +E ++ H+NI++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASALE 503
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 504 YL---HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 182 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 235
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 276
Query: 618 EIVDPNLLSREDINFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 277 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSIRH 447
D F +G+G FG+V+ AR + A+KV L+ V E E+ +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ + + + L+LE+ P G L K L D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 131
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
+VIH D+KP N+L+ ++DFG + S + T+ Y+ PE +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTD 595
D++ G++ E P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 394 FSENNLI-----GRGSFGSVFKA-------RLGDGMEVAMKVFNLQYG-RVFKSFDVECE 440
F NL+ G G FG V KA R G VA+K+ + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 441 MMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----------- 489
++K + H ++IK+ +CS + L++EY +GSL +L S + Y
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 490 -----QRLNIMIDVASALEYLHFG--YSAQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAK 540
+R M D+ S + G Y A+ ++H DL N+L+ + +SDFG+++
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ ED ++Q + +MA E + + DV+SFG++L E T
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 391 TDGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRH 447
+D + +G+G+F V + G+E A K+ N + R F+ + E + + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ S E F LV + + G L + + + + Y + + LE + +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 119
Query: 508 GYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+S ++H +LKP N+LL L+DFG+A + S T GY++PE
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPE 176
Query: 565 YGKEGRVSANGDVYSFGIML 584
K+ S D+++ G++L
Sbjct: 177 VLKKDPYSKPVDIWACGVIL 196
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 391 TDGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRH 447
+D + +G+G+F V + G+E A K+ N + R F+ + E + + ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ S E F LV + + G L + + + + Y + + LE + +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 143
Query: 508 GYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+S ++H +LKP N+LL L+DFG+A + S T GY++PE
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPE 200
Query: 565 YGKEGRVSANGDVYSFGIML 584
K+ S D+++ G++L
Sbjct: 201 VLKKDPYSKPVDIWACGVIL 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 391 TDGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRH 447
+D + +G+G+F V + G+E A K+ N + R F+ + E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ S E F LV + + G L + + + + Y + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 120
Query: 508 GYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+S ++H +LKP N+LL L+DFG+A + S T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPE 177
Query: 565 YGKEGRVSANGDVYSFGIML 584
K+ S D+++ G++L
Sbjct: 178 VLKKDPYSKPVDIWACGVIL 197
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+K+ + L + K F E +MK + H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ LV+EY G + YL + + + R + SA++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPEYGKEGRVS 572
DLK N+LLD +M ++DFG + ++ T + A G Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 573 A-NGDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L Y LD+ + +++AL YL S + +
Sbjct: 83 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 574 NGDVYSFGIMLMETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 241
Query: 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670
C ++++ +C P +R E+ +L I
Sbjct: 242 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+K+ + L + K F E +MK + H NI+K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ L++EY G + YL + + + R + SA++Y H +++H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVH 137
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPEYGKEGRVS 572
DLK N+LLD +M ++DFG + ++ T+ + A G Y APE + +
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 573 A-NGDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L Y LD+ + +++AL YL S + +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 192 ASDVWMFGVCMWE 204
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 399 LIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEM------MKSIRHRNIIK 452
+IG+GSFG V AR EV V LQ + K + + M +K+++H ++
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ S + VL+Y+ G L +L L+ R ++ASAL YLH S
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLN 159
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
+++ DLKP N+LLD L+DFG+ K + +T + T Y+APE +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT--STFCGTPEYLAPEVLHKQPYD 217
Query: 573 ANGDVYSFGIMLMETFTRKKP---------TDEIFNGEMTLK 605
D + G +L E P D I N + LK
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ L+K++ +S + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 120
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 625 LSRED 629
S D
Sbjct: 235 TSMPD 239
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+K+ + L + K F E +MK + H NI+K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ LV+EY G + YL + + + R + SA++Y H Y ++H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVH 137
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPEYGKEGRVS 572
DLK N+LLD +M ++DFG + ++ T+ + G Y APE + +
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFS------NEFTVGNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 573 A-NGDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 20/248 (8%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFDVECEMMK 443
L++ + F + ++G+GSFG VF A + A+K L+ V DVEC M++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 67
Query: 444 ------SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMID 497
+ H + + + +E V+EY+ G L ++ S + D+ + +
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAE 126
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
+ L++LH S +++ DLK N+LLD + ++DFG+ K D T T
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NXFCGT 181
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP-----TDEIFNGEMTLKHWVNDWL 612
Y+APE + + + D +SFG++L E + P +E+F+ + WL
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWL 241
Query: 613 PISTKEIV 620
K+++
Sbjct: 242 EKEAKDLL 249
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ L+K++ +S + I L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 118
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 176
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 625 LSRED 629
S D
Sbjct: 233 TSMPD 237
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++ G+FG+V+K G+ +++ + + L+
Sbjct: 11 PNQALLRILKETE-------FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 122
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 123 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ L+K++ +S + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLA 120
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 625 LSRED 629
S D
Sbjct: 235 TSMPD 239
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L Y LD+ + +++AL YL S + +
Sbjct: 81 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 195 ASDVWMFGVCMWE 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L Y LD+ + +++AL YL S + +
Sbjct: 75 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 189 ASDVWMFGVCMWE 201
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Query: 374 PPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG- 429
P +A+ R+ E F + ++ G+FG+V+K G+ +++ + + L+
Sbjct: 4 PNQALLRILKETE-------FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 56
Query: 430 --RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD 487
+ K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 115
Query: 488 IYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547
LN + +A + YL +++H DL NVL+ ++DFG+AKLL E++
Sbjct: 116 SQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603
I +MA E + DV+S+G+ + E T KP D I E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L Y LD+ + +++AL YL S + +
Sbjct: 80 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 194 ASDVWMFGVCMWE 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 391 TDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRH 447
TD + IG+G+F V + +L G E A K+ N + R + + E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ S S E F LV + + G L + + + Y Y + + LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLH 118
Query: 508 GYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+ V+H DLKP N+LL L+DFG+A + + Q+ T GY++PE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 565 YGKEGRVSANGDVYSFGIML 584
++ D+++ G++L
Sbjct: 177 VLRKEAYGKPVDIWACGVIL 196
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 388 CRATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR 446
R F E ++G+G+FG V KAR D A+K ++ + E ++ S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLN 60
Query: 447 H-------------RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN--YILDIYQR 491
H RN +K +++ + + +EY +G+L +HS N D Y R
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTI 550
L + AL Y+H S +IH DLKP N+ +D++ + DFG+AK + R D +
Sbjct: 121 L--FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 551 QTQTL-----------ATIGYMAPEY-GKEGRVSANGDVYSFGIMLME 586
+Q L T Y+A E G + D+YS GI+ E
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVF---NLQYGRVFKSFDVECEMMKSIRH 447
D F +G+G FG+V+ AR + A+KV L+ V E E+ +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ + + + L+LE+ P G L K L D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 131
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
+VIH D+KP N+L+ ++DFG + S + T+ Y+ PE +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTD 595
D++ G++ E P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+K+ + L + K F E +MK + H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ LV+EY G + YL + + + R + SA++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA-N 574
DLK N+LLD +M ++DFG + T ++ + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 575 GDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+K+ + L + K F E +MK + H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ LV+EY G + YL + + + R + SA++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA-N 574
DLK N+LLD +M ++DFG + T ++ + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 575 GDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+++ + L + K F E +MK + H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ LV+EY G + YL + + + R + SA++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA-N 574
DLK N+LLD +M ++DFG + T ++ + + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKYDGPE 193
Query: 575 GDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 40/217 (18%)
Query: 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
F E LIG G FG VFKA+ DG +K ++Y + + E + + + H NI+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIK--RVKYNN--EKAEREVKALAKLDHVNIVH 68
Query: 453 VI----------------SSCSNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIM 495
SS S + + +E+ G+LE+++ LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
+ ++Y+H S ++I+ DLKPSN+ L D + DFG+ L + + + ++
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSK 182
Query: 556 ATIGYMAPE------YGKEGRVSANGDVYSFGIMLME 586
T+ YM+PE YGKE D+Y+ G++L E
Sbjct: 183 GTLRYMSPEQISSQDYGKE------VDLYALGLILAE 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKS----FDVECEMMKSIRHRNIIKV 453
+IGRG+FG V R +V AMK+ + ++ + +S F E ++M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ ++ + +V+EYMP G L + SNY + + + R +V AL+ +H S
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMG 193
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE----YGKE 568
IH D+KP N+LLD + L+DFG + +E T + T Y++PE G +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGD 252
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
G D +S G+ L E P
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKS----FDVECEMMKSIRHRNIIKV 453
+IGRG+FG V R +V AMK+ + ++ + +S F E ++M ++++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ ++ + +V+EYMP G L + SNY + + + R +V AL+ +H S
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMG 188
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE----YGKE 568
IH D+KP N+LLD + L+DFG + +E T + T Y++PE G +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGD 247
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
G D +S G+ L E P
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L + LD+ + +++AL YL S + +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 572 ASDVWMFGVCMWE 584
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSF-DVECEMMKSIRHRNII 451
F++ + IG+GSFG V+K EV A+K+ +L+ E ++ I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLH----SSNYILDIYQRLNIMIDVASALEYLHF 507
+ S +++EY+ GS L YI I+ ++ L+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA------TILREILKGLDYLH- 133
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
S + IH D+K +NVLL + L+DFG+A LT D + + T +MAPE K
Sbjct: 134 --SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIK 189
Query: 568 EGRVSANGDVYSFGIMLMETFTRKKPTDEI 597
+ D++S GI +E + P ++
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMID----------- 497
++ ++ +C+ +V+ E+ G+L YL S Y+ ++ D
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 498 --VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKS----FDVECEMMKSIRHRNIIKV 453
+IGRG+FG V R +V AMK+ + ++ + +S F E ++M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ ++ + +V+EYMP G L + SNY + + + R +V AL+ +H S
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMG 193
Query: 513 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE----YGKE 568
IH D+KP N+LLD + L+DFG + +E T + T Y++PE G +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGD 252
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
G D +S G+ L E P
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 400 IGRGSFGSVFKARLGDGME-VAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISS 456
IG G++G+VFKA+ + E VA+K L V S E ++K ++H+NI+++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
+++ LV E+ L+KY S N LD + + + L + H S V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV-SANG 575
DLKP N+L++ N L+DFG+A+ + + + T+ Y P+ ++ S +
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 576 DVYSFGIMLMETFTRKKP 593
D++S G + E +P
Sbjct: 184 DMWSAGCIFAELANAARP 201
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 394 FSENNL-----IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR- 446
F NNL +G G+FG V +A G G E A+ ++ + D + +M ++
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 447 ------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH-------------------- 480
H NI+ ++ +C++ ++ EY +G L +L
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 481 --SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 538
L++ L+ VA + +L S IH D+ NVLL + VA + DFG+
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
A+ + + ++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 103/238 (43%), Gaps = 25/238 (10%)
Query: 394 FSENNLIGRGSFGSV-FKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
++ N IGRGS+G V + G + A K + F E E+MKS+ H NII+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 453 VISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ + + LV+E G L E+ +H + R IM DV SA+ Y H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---KL 125
Query: 512 QVIHCDLKPSNVL-LDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
V H DLKP N L L D+ + L DFG+A R + + T Y++P+ E
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGKMMRTKVGTPYYVSPQV-LE 181
Query: 569 GRVSANGDVYSFGIMLMETFTR----KKPTD-----EIFNGEMTLKHWVNDWLPISTK 617
G D +S G+M+ PTD +I G T DWL +S +
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPE--KDWLNVSPQ 237
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+K+ + L + K F E +MK + H NI+K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ L++EY G + YL + + + R + SA++Y H +++H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVH 134
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPEYGKEGRVS 572
DLK N+LLD +M ++DFG + ++ T+ + G Y APE + +
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 573 A-NGDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 398 NLIGRGSFGSVFKARLGDG--------MEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRN 449
++G+G +G VF+ R G M+V K ++ + E +++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
I+ +I + L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG 569
+I+ DLKP N++L+ L+DFG+ K + T+ TI YMAPE
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHTFCGTIEYMAPEILMRS 196
Query: 570 RVSANGDVYSFGIMLMETFT---------RKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620
+ D +S G ++ + T RKK D+I ++ L ++ K+++
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 621 DPNLLSR 627
N SR
Sbjct: 257 KRNAASR 263
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 398 NLIGRGSFGSVFKARLGDG--------MEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRN 449
++G+G +G VF+ R G M+V K ++ + E +++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
I+ +I + L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG 569
+I+ DLKP N++L+ L+DFG+ K + T+ TI YMAPE
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHXFCGTIEYMAPEILMRS 196
Query: 570 RVSANGDVYSFGIMLMETFT---------RKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620
+ D +S G ++ + T RKK D+I ++ L ++ K+++
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 621 DPNLLSR 627
N SR
Sbjct: 257 KRNAASR 263
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+++ + L + K F E +MK + H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ LV+EY G + YL + + + R + SA++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA-N 574
DLK N+LLD +M ++DFG + T ++ + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 575 GDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 53/230 (23%)
Query: 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
F E LIG G FG VFKA+ DG ++ ++Y + + E + + + H NI+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIR--RVKYNN--EKAEREVKALAKLDHVNIVH 69
Query: 453 VI-----------------------------SSCSNEEFKALVLEYMPHGSLEKYLHSSN 483
SS S + + +E+ G+LE+++
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 484 -YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542
LD L + + ++Y+H S ++IH DLKPSN+ L D + DFG+ L
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 543 TREDQSTIQTQTLATIGYMAPE------YGKEGRVSANGDVYSFGIMLME 586
+ + +T++ T+ YM+PE YGKE D+Y+ G++L E
Sbjct: 187 KNDGK---RTRSKGTLRYMSPEQISSQDYGKE------VDLYALGLILAE 227
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEM-----MK 443
AT + IG G++G+V+KAR G VA+K + G E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 444 SIRHRNIIKVISSCS----NEEFK-ALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMID 497
+ H N+++++ C+ + E K LV E++ L YL + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
L++LH + ++H DLKP N+L+ L+DFG+A++ + + + T
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVT 174
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591
+ Y APE + + D++S G + E F RK
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 103/238 (43%), Gaps = 25/238 (10%)
Query: 394 FSENNLIGRGSFGSV-FKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
++ N IGRGS+G V + G + A K + F E E+MKS+ H NII+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 453 VISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ + + LV+E G L E+ +H + R IM DV SA+ Y H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---KL 142
Query: 512 QVIHCDLKPSNVL-LDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
V H DLKP N L L D+ + L DFG+A R + + T Y++P+ E
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGKMMRTKVGTPYYVSPQV-LE 198
Query: 569 GRVSANGDVYSFGIMLMETFTR----KKPTD-----EIFNGEMTLKHWVNDWLPISTK 617
G D +S G+M+ PTD +I G T DWL +S +
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPE--KDWLNVSPQ 254
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ L+ ++ +S + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPL-IKSYLFQLLQGLA 120
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 625 LSRED 629
S D
Sbjct: 235 TSMPD 239
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL----DIYQRLNIM-------ID 497
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL----DIYQRLNIM-------ID 497
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 14/245 (5%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIR 446
+ + F + IG G++G V+KAR G VA+K L + V + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K++ E LV E++ L+ ++ +S + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPL-IKSYLFQLLQGLA 119
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
F +S +V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 177
Query: 567 KEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVDPNL 624
+ + D++S G + E TR+ +F G+ + + + T E+V P +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 625 LSRED 629
S D
Sbjct: 234 TSMPD 238
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 382 FSYLELC-RATDGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQY--GRVFKSFDV 437
F + C R TD + +G+G+F V + + E A K+ N + R + +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 438 ECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMID 497
E + + ++H NI+++ S S E F LV + + G L + + + Y Y +
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHC 135
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDQSTIQTQT 554
+ LE ++ + ++H DLKP N+LL L+DFG+A + E Q+
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA- 194
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T GY++PE ++ D+++ G++L
Sbjct: 195 -GTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEM-----MK 443
AT + IG G++G+V+KAR G VA+K + G E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 444 SIRHRNIIKVISSCS----NEEFK-ALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMID 497
+ H N+++++ C+ + E K LV E++ L YL + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
L++LH + ++H DLKP N+L+ L+DFG+A++ + + + T
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVT 174
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591
+ Y APE + + D++S G + E F RK
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKS----FDVECEMMKSIRHRNIIKV 453
+IGRG+FG V R +V AMK+ + ++ + +S F E ++M ++++
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ ++++ +V+EYMP G L + SNY + +V AL+ +H S +
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGL 195
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT-LATIGYMAPE----YGKE 568
IH D+KP N+LLD + L+DFG + ++ + T + T Y++PE G +
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
G D +S G+ L E P
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 30/215 (13%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL-------DIYQRLNIM------ 495
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 496 -IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L + LD+ + +++AL YL S + +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 192 ASDVWMFGVCMWE 204
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN-----YIL---DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S Y + D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 131/285 (45%), Gaps = 36/285 (12%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 123
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L ++ + T YM+PE +
Sbjct: 124 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 177
Query: 569 GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628
S D++S G+ L+E + P P KE P + E
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIP-----------------PPDAKEDSRPPMAIFE 220
Query: 629 DINFVAKE---QCVSFVFNVAME-----CTVESPEQRINAKEIVT 665
++++ E + S VF++ + C +++P +R + K+++
Sbjct: 221 LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 265
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN-----YIL---DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S Y + D+Y+ +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN-----YIL---DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S Y + D+Y+ +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEM-----MK 443
AT + IG G++G+V+KAR G VA+K + G E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 444 SIRHRNIIKVISSCS----NEEFK-ALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMID 497
+ H N+++++ C+ + E K LV E++ L YL + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
L++LH + ++H DLKP N+L+ L+DFG+A++ + + + T
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVVVT 174
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591
+ Y APE + + D++S G + E F RK
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 391 TDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRH 447
TD + +G+G+F V + ++ G E A K+ N + R + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ S S E F LV + + G L + + + Y Y + + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNH 118
Query: 508 GYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+ ++H DLKP N+LL L+DFG+A + + Q+ T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 565 YGKEGRVSANGDVYSFGIML 584
++ D+++ G++L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 391 TDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMK--------VFNLQYGRVFKSFDVECEM 441
+ F +L+G G++G V A G VA+K +F L+ R E ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---SSNYILD------IYQRL 492
+K +H NII + + + F+ Y+ ++ LH S+ + D IYQ L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE------- 545
A++ LH + VIH DLKPSN+L++ N + DFG+A+++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 546 -DQSTIQTQTLATIGYMAPEYG-KEGRVSANGDVYSFGIMLMETFTRK 591
Q + T+ +AT Y APE + S DV+S G +L E F R+
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 394 FSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
FS + +IGRG FG V+ R D G AMK + + ++ + + ++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIMLS 244
Query: 453 VISS-------CSNEEFK-----ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 500
++S+ C + F + +L+ M G L +L + R ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LE++H + V++ DLKP+N+LLD++ +SD G+A +++ ++ T GY
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 356
Query: 561 MAPEYGKEG-RVSANGDVYSFGIMLME------TFTRKKPTDEIFNGEMTL 604
MAPE ++G ++ D +S G ML + F + K D+ MTL
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 394 FSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
FS + +IGRG FG V+ R D G AMK + + ++ + + ++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIMLS 244
Query: 453 VISS-------CSNEEFK-----ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 500
++S+ C + F + +L+ M G L +L + R ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LE++H + V++ DLKP+N+LLD++ +SD G+A +++ ++ T GY
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 356
Query: 561 MAPEYGKEG-RVSANGDVYSFGIMLME------TFTRKKPTDEIFNGEMTL 604
MAPE ++G ++ D +S G ML + F + K D+ MTL
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 34/231 (14%)
Query: 394 FSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
FS + +IGRG FG V+ R D G AMK + K ++ ++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK------KRIKMKQGETLALNERIMLS 244
Query: 453 VISS-------CSNEEFK-----ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 500
++S+ C + F + +L+ M G L +L + R ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LE++H + V++ DLKP+N+LLD++ +SD G+A +++ ++ T GY
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 356
Query: 561 MAPEYGKEG-RVSANGDVYSFGIMLME------TFTRKKPTDEIFNGEMTL 604
MAPE ++G ++ D +S G ML + F + K D+ MTL
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN-----YIL---DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S Y + D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 391 TDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRH 447
TD + +G+G+F V + ++ G E A K+ N + R + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+++ S S E F LV + + G L + + + Y Y + + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNH 118
Query: 508 GYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+ ++H DLKP N+LL L+DFG+A + + Q+ T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 565 YGKEGRVSANGDVYSFGIML 584
++ D+++ G++L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 34/231 (14%)
Query: 394 FSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIK 452
FS + +IGRG FG V+ R D G AMK + K ++ ++ R ++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK------KRIKMKQGETLALNERIMLS 243
Query: 453 VISS-------CSNEEFK-----ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 500
++S+ C + F + +L+ M G L +L + R ++
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 302
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LE++H + V++ DLKP+N+LLD++ +SD G+A +++ ++ T GY
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 355
Query: 561 MAPEYGKEG-RVSANGDVYSFGIMLME------TFTRKKPTDEIFNGEMTL 604
MAPE ++G ++ D +S G ML + F + K D+ MTL
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG GS G V AR G +VA+K+ +L+ + + E +M+ +H N++++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
E +++E++ G+L + S L+ Q + V AL YLH + VIH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K ++LL + LSDFG ++++ + + T +MAPE + D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 579 SFGIMLMETFTRKKP 593
S GIM++E + P
Sbjct: 226 SLGIMVIEMVDGEPP 240
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 388 CRATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR 446
R F E ++G+G+FG V KAR D A+K ++ + E ++ S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLN 60
Query: 447 H-------------RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN--YILDIYQR 491
H RN +K +++ + + +EY + +L +HS N D Y R
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTI 550
L + AL Y+H S +IH DLKP N+ +D++ + DFG+AK + R D +
Sbjct: 121 L--FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 551 QTQTL-----------ATIGYMAPEY-GKEGRVSANGDVYSFGIMLME 586
+Q L T Y+A E G + D+YS GI+ E
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMK------S 444
D F ++G+GSFG V AR+ + G A+KV L+ + + DVEC M + +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLA 80
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
H + ++ + V+E++ G L ++ S + R ++ SAL +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMF 139
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAP 563
LH +I+ DLK NVLLD L+DFG+ K + + T T T Y+AP
Sbjct: 140 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAP 193
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKP-----TDEIF----NGEMTLKHWVND 610
E +E D ++ G++L E P D++F N E+ W+++
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVF-NLQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ E +++E G L +L + LD+ + +++AL YL S + +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSA 573
H D+ NVL+ L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 574 NGDVYSFGIMLME 586
DV+ FG+ + E
Sbjct: 572 ASDVWMFGVCMWE 584
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 13/222 (5%)
Query: 400 IGRGSFG-SVFKARLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISS 456
IG GSFG ++ DG + +K N+ + + E ++ +++H NI++ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYIL-DIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+V++Y G L K +++ +L Q L+ + + AL+++H +++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILH 148
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ--TQTLATIGYMAPEYGKEGRVSA 573
D+K N+ L + L DFGIA++L ST++ + T Y++PE + +
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLN----STVELARACIGTPYYLSPEICENKPYNN 204
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS 615
D+++ G +L E T K + + LK + P+S
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS 246
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 391 TDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMK--------VFNLQYGRVFKSFDVECEM 441
+ F +L+G G++G V A G VA+K +F L+ R E ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---SSNYILD------IYQRL 492
+K +H NII + + + F+ Y+ ++ LH S+ + D IYQ L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE------- 545
A++ LH + VIH DLKPSN+L++ N + DFG+A+++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 546 -DQSTIQTQTLATIGYMAPEYG-KEGRVSANGDVYSFGIMLMETFTRK 591
Q + T+ +AT Y APE + S DV+S G +L E F R+
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 397 NNLIGRGSFGSVFKARLGD-GMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKV- 453
++++G+G+ +VF+ R G A+KVFN + + R E E++K + H+NI+K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 454 -ISSCSNEEFKALVLEYMPHGSLEKYLH--SSNYILDIYQRLNIMIDVASALEYLHFGYS 510
I + K L++E+ P GSL L S+ Y L + L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 511 AQVIHCDLKPSNVLL----DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY- 565
++H ++KP N++ D V L+DFG A+ L ++Q T Y+ P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VXLYGTEEYLHPDMY 187
Query: 566 -------GKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ + A D++S G+ T P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 30/277 (10%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 126
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L E + + + T YM+PE +
Sbjct: 127 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQG 180
Query: 569 GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628
S D++S G+ L+E + P + E+ L + VN+ P + S E
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL-LDYIVNEPPPKLPSAV-----FSLE 234
Query: 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+FV K C +++P +R + K+++
Sbjct: 235 FQDFVNK-------------CLIKNPAERADLKQLMV 258
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN-----YIL---DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S Y + D+Y+ +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 190 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN-----YIL---DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S Y + D+Y+ +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN-----YIL---DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S Y + D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMK---VFNLQYGRVFKSFDVECEM---- 441
AT + IG G++G+V+KAR G VA+K V N G E+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 442 -MKSIRHRNIIKVISSC----SNEEFK-ALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNI 494
+++ H N+++++ C ++ E K LV E++ L YL + L ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDL 125
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
M L++LH + ++H DLKP N+L+ L+DFG+A++ + + T
Sbjct: 126 MRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPV 179
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591
+ T+ Y APE + + D++S G + E F RK
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 400 IGRGSFGSVFKARLGDGME-VAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISS 456
IG G++G+VFKA+ + E VA+K L V S E ++K ++H+NI+++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
+++ LV E+ L+KY S N LD + + + L + H S V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV-SANG 575
DLKP N+L++ N L++FG+A+ + + + T+ Y P+ ++ S +
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 576 DVYSFGIMLMETFTRKKP 593
D++S G + E +P
Sbjct: 184 DMWSAGCIFAELANAGRP 201
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKS----FDVECEMMKSIRHRNIIKVI 454
IG GS+G K R DG + K L YG + ++ E +++ ++H NI++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 455 SSCSNEEFKAL--VLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGY 509
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 510 SA--QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
V+H DLKP+NV LD L DFG+A++L ++ + + T YM+PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMSPEQMN 189
Query: 568 EGRVSANGDVYSFGIMLME 586
+ D++S G +L E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFNLQYGRV-FKSFDVECEMMKSIRHRNIIKVI 454
+G G+FGSV ++ R ++VA+KV + + E ++M + + I+++I
Sbjct: 18 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
C E LV+E G L K+L + + ++ V+ ++YL +
Sbjct: 77 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTLATIGYMAPEYGKEGRVSA 573
H DL NVLL + A +SDFG++K L +D T ++ + + APE + S+
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 574 NGDVYSFGIMLMETFTR-KKPTDEIFNGEM 602
DV+S+G+ + E + +KP ++ E+
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN-----YIL---DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S Y + D+Y+ +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKS----FDVECEMMKSIRHRNIIKVI- 454
IGRGSF +V+K L V + LQ ++ KS F E E +K ++H NI++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 455 ---SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
S+ ++ LV E G+L+ YL + I + + L++LH +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGLQFLH-TRTP 150
Query: 512 QVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR 570
+IH DLK N+ + + D G+A L +++ + T + APE +E +
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEE-K 205
Query: 571 VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
+ DVY+FG +E T + P E N + + P S ++ P +
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVF---KSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G ++ E +++ I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 495
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 496 --IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 155 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 398 NLIGRGSFGSVFKARLGDGMEV----AMKVFN----LQYGRVFKSFDVECEMMKSIRHRN 449
++G G++G VF R G + AMKV +Q + + E ++++ IR
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 450 IIKVISSCSNEEFK-ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI-DVASALEYLHF 507
+ + E K L+L+Y+ G L + H S + I + ++ ALE+LH
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEIVLALEHLH- 176
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
+I+ D+K N+LLD N L+DFG++K D++ TI YMAP+ +
Sbjct: 177 --KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPDIVR 233
Query: 568 EGRVSANG--DVYSFGIMLMETFTRKKP 593
G + D +S G+++ E T P
Sbjct: 234 GGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKS----FDVECEMMKSIRHRNIIKVI 454
IG GS+G K R DG + K L YG + ++ E +++ ++H NI++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 455 SSCSNEEFKAL--VLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGY 509
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 510 SA--QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
V+H DLKP+NV LD L DFG+A++L + ++ + T YM+PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKTFVGTPYYMSPEQMN 189
Query: 568 EGRVSANGDVYSFGIMLME 586
+ D++S G +L E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKS----FDVECEMMKSIRHRNIIKVI 454
IG GS+G K R DG + K L YG + ++ E +++ ++H NI++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 455 SSCSNEEFKAL--VLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGY 509
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 510 SA--QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
V+H DLKP+NV LD L DFG+A++L + ++ + T YM+PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKAFVGTPYYMSPEQMN 189
Query: 568 EGRVSANGDVYSFGIMLME 586
+ D++S G +L E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 397 NNLIGRGSFGSVFKARLGD-GMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKV- 453
++++G+G+ +VF+ R G A+KVFN + + R E E++K + H+NI+K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 454 -ISSCSNEEFKALVLEYMPHGSLEKYLH--SSNYILDIYQRLNIMIDVASALEYLHFGYS 510
I + K L++E+ P GSL L S+ Y L + L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 511 AQVIHCDLKPSNVLL----DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY- 565
++H ++KP N++ D V L+DFG A+ L ++Q T Y+ P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMY 187
Query: 566 -------GKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ + A D++S G+ T P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 33/289 (11%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGME-VAMKVFNLQYGRVFKSFD---VECEMMKSIRH 447
D + +IG G+ V A E VA+K NL+ + S D E + M H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE--KCQTSMDELLKEIQAMSQCHH 67
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSL--------EKYLHSSNYILDIYQRLNIMIDVA 499
NI+ +S ++ LV++ + GS+ K H S +LD I+ +V
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREVL 126
Query: 500 SALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST---IQTQTLA 556
LEYLH IH D+K N+LL ++ ++DFG++ L T ++ +
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 557 TIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS 615
T +MAPE ++ R D++SFGI +E T P + ++ + ND +
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 243
Query: 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664
T + D +L + +F + +S C + PE+R A E++
Sbjct: 244 TG-VQDKEMLKKYGKSF---RKMISL-------CLQKDPEKRPTAAELL 281
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV--------FKSFDVECEMMK 443
D F + ++GRG FG VF + M+ K++ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 444 SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI---DVAS 500
+ R I+ + + + LV+ M G + ++++ + +Q + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT---LAT 557
LE+LH +I+ DLKP NVLLDD+ +SD G+A L QT+T T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----KAGQTKTKGYAGT 352
Query: 558 IGYMAPE--YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
G+MAPE G+E S D ++ G+ L E + P
Sbjct: 353 PGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV--------FKSFDVECEMMK 443
D F + ++GRG FG VF + M+ K++ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 444 SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI---DVAS 500
+ R I+ + + + LV+ M G + ++++ + +Q + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT---LAT 557
LE+LH +I+ DLKP NVLLDD+ +SD G+A L QT+T T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----KAGQTKTKGYAGT 352
Query: 558 IGYMAPE--YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
G+MAPE G+E S D ++ G+ L E + P
Sbjct: 353 PGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV--------FKSFDVECEMMK 443
D F + ++GRG FG VF + M+ K++ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 444 SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI---DVAS 500
+ R I+ + + + LV+ M G + ++++ + +Q + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT---LAT 557
LE+LH +I+ DLKP NVLLDD+ +SD G+A L QT+T T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----KAGQTKTKGYAGT 352
Query: 558 IGYMAPE--YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
G+MAPE G+E S D ++ G+ L E + P
Sbjct: 353 PGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 33/289 (11%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGME-VAMKVFNLQYGRVFKSFD---VECEMMKSIRH 447
D + +IG G+ V A E VA+K NL+ + S D E + M H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE--KCQTSMDELLKEIQAMSQCHH 72
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSL--------EKYLHSSNYILDIYQRLNIMIDVA 499
NI+ +S ++ LV++ + GS+ K H S +LD I+ +V
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREVL 131
Query: 500 SALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST---IQTQTLA 556
LEYLH IH D+K N+LL ++ ++DFG++ L T ++ +
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 557 TIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS 615
T +MAPE ++ R D++SFGI +E T P + ++ + ND +
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248
Query: 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664
T + D +L + +F + +S C + PE+R A E++
Sbjct: 249 TG-VQDKEMLKKYGKSF---RKMISL-------CLQKDPEKRPTAAELL 286
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV--------FKSFDVECEMMK 443
D F + ++GRG FG VF + M+ K++ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 444 SIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI---DVAS 500
+ R I+ + + + LV+ M G + ++++ + +Q + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT---LAT 557
LE+LH +I+ DLKP NVLLDD+ +SD G+A L QT+T T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----KAGQTKTKGYAGT 352
Query: 558 IGYMAPE--YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
G+MAPE G+E S D ++ G+ L E + P
Sbjct: 353 PGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F IG GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EYMP G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F IG GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EYMP G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 390 ATDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRH 447
++ F + +G G++ +V+K G+ VA+K L S + E +MK ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY-------ILDIYQRLNIMIDVAS 500
NI+++ E LV E+M + L+KY+ S L++ + +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL---- 117
Query: 501 ALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
L+ L F + +++H DLKP N+L++ L DFG+A+ + + + T+ Y
Sbjct: 118 -LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLWY 174
Query: 561 MAPEYGKEGRV-SANGDVYSFGIMLMETFTRK 591
AP+ R S + D++S G +L E T K
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSV-FKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG GS G V G +VA+K +L+ + + E +M+ H N++ + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ +V+E++ G+L + + ++ Q + + V AL YLH + VIH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 579 SFGIMLMETFTRKKP 593
S GIM++E + P
Sbjct: 226 SLGIMVIEMIDGEPP 240
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 395 SENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
S+ ++G G FG V K G+++A K+ + + + E +M + H N+I++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ ++ LV+EY+ G L + +Y L + M + + ++H Y +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---I 208
Query: 514 IHCDLKPSNVLL--DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+H DLKP N+L D + DFG+A+ ++ + T ++APE V
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAPEVVNYDFV 265
Query: 572 SANGDVYSFGIM 583
S D++S G++
Sbjct: 266 SFPTDMWSVGVI 277
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYG 566
S +I+ DLKP N+L+D ++DFG AK + +T TL T Y+APE
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEII 196
Query: 567 KEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 197 LSKGYNKAVDWWALGVLIYE 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 400 IGRGSFGSV----FKARLGDGMEVAMKVFNLQYGRV-FKSFDVECEMMKSIRHRNIIKVI 454
+G G+FGSV ++ R ++VA+KV + + E ++M + + I+++I
Sbjct: 344 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
C E LV+E G L K+L + + ++ V+ ++YL +
Sbjct: 403 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 458
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-STIQTQTLATIGYMAPEYGKEGRVSA 573
H +L NVLL + A +SDFG++K L +D T ++ + + APE + S+
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 574 NGDVYSFGIMLMETFTR-KKPTDEIFNGEM 602
DV+S+G+ + E + +KP ++ E+
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 400 IGRGSFGSVFK--ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRNIIKVISS 456
+G G++ +V+K ++L D + VA+K L++ + E ++K ++H NI+ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
E+ LV EY+ L++YL I++++ N+ + + L L + + +V+H
Sbjct: 69 IHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMH---NVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 517 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT----LATIGYMAPE 564
DLKP N+L+++ L+DFG+A+ +I T+T + T+ Y P+
Sbjct: 125 DLKPQNLLINERGELKLADFGLAR------AKSIPTKTYDNEVVTLWYRPPD 170
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYG 566
S +I+ DLKP N+L+D ++DFG AK + +T TL T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEII 211
Query: 567 KEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRHRN 449
F + ++G+G FG V ++ G A K + + K + E ++++ + R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL-HSSNYILDIYQRLNIMIDVASALEYLHFG 508
++ + + ++ LVL M G L+ ++ H + + ++ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH-- 303
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
++++ DLKP N+LLDD+ +SD G+A + + TI+ + + T+GYMAPE K
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQTIKGR-VGTVGYMAPEVVKN 359
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
R + + D ++ G +L E + P
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 44/228 (19%)
Query: 391 TDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMK--------VFNLQYGRVFKSFDVECEM 441
+ F +L+G G++G V A G VA+K +F L+ R E ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---SSNYILD------IYQRL 492
+K +H NII + + + F+ Y+ ++ LH S+ + D IYQ L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE------- 545
A++ LH + VIH DLKPSN+L++ N + DFG+A+++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 546 -DQSTIQTQTLATIGYMAPEYG-KEGRVSANGDVYSFGIMLMETFTRK 591
Q + + +AT Y APE + S DV+S G +L E F R+
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 387 LCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV----ECEM 441
C + + IG+G+FG VFKAR G +VA+K ++ + + F + E ++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 442 MKSIRHRNIIKVISSCSNE-----EFKA---LVLEYMPHGSLEKYLHSSNYILDIYQRLN 493
++ ++H N++ +I C + KA LV ++ H L L + + +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 129
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTREDQSTIQ 551
+M + + L Y+H +++H D+K +NVL+ + V L+DFG+A+ L + Q
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 552 TQTLATIGYMAPE-YGKEGRVSANGDVYSFGIMLMETFTR 590
+ T+ Y PE E D++ G ++ E +TR
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRHRN 449
F + ++G+G FG V ++ G A K + + K + E ++++ + R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYL-HSSNYILDIYQRLNIMIDVASALEYLHFG 508
++ + + ++ LVL M G L+ ++ H + + ++ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH-- 303
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
++++ DLKP N+LLDD+ +SD G+A + + TI+ + + T+GYMAPE K
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQTIKGR-VGTVGYMAPEVVKN 359
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
R + + D ++ G +L E + P
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V+KA+ G A+K L+ + + E ++K ++H NI+K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
++ LV E++ L+K L L+ + ++ + + + Y H +V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-GKEGRVSANGD 576
LKP N+L++ ++DFG+A+ + T + T+ Y AP+ + S D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 577 VYSFGIMLME 586
++S G + E
Sbjct: 184 IWSVGCIFAE 193
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 398 NLIGRGSFGSVF--KARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
++G G+F VF K RL G A+K S + E ++K I+H NI+ +
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ LV++ + G L + + L I V SA++YLH ++H
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ-QVLSAVKYLH---ENGIVH 129
Query: 516 CDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
DLKP N+L ++N ++DFG++K+ +Q+ I + T GY+APE + S
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 573 ANGDVYSFGIM 583
D +S G++
Sbjct: 186 KAVDCWSIGVI 196
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 44/225 (19%)
Query: 389 RATDGFSEN----NLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDV------ 437
+T GF EN ++GRG V + E A+K+ ++ G F + +V
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 438 ---ECEMMKSIR-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR-- 491
E ++++ + H NII++ + F LV + M G L YL + + R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
+ +++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKL 180
Query: 552 TQTLATIGYMAPE------------YGKEGRVSANGDVYSFGIML 584
+ T Y+APE YGKE D++S G+++
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 390 ATDGFS---------ENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDVEC 439
+TD FS + +++G G+ V L E A+K+ Q G + E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 440 EMMKSIR-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDV 498
EM+ + HRN++++I E+ LV E M GS+ ++H + ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 499 ASALEYLHFGYSAQVIHCDLKPSNVLLDD-NMVA--HLSDFGIAK-LLTREDQSTIQTQT 554
ASAL++LH + + H DLKP N+L + N V+ + DFG+ + D S I T
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 555 LAT----IGYMAPE----YGKEGRV-SANGDVYSFGIML 584
L T YMAPE + +E + D++S G++L
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 389 RATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRH 447
R F E ++G+G+FG V KAR D A+K ++ + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVXLLASLNH 61
Query: 448 -------------RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN--YILDIYQRL 492
RN +K ++ + + EY + +L +HS N D Y RL
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQ 551
+ AL Y+H S +IH +LKP N+ +D++ + DFG+AK + R D +
Sbjct: 122 --FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 552 TQTL-----------ATIGYMAPEY-GKEGRVSANGDVYSFGIMLME 586
+Q L T Y+A E G + D YS GI+ E
Sbjct: 177 SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V+KA+ G A+K L+ + + E ++K ++H NI+K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
++ LV E++ L+K L L+ + ++ + + + Y H +V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-GKEGRVSANGD 576
LKP N+L++ ++DFG+A+ + T + T+ Y AP+ + S D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 577 VYSFGIMLME 586
++S G + E
Sbjct: 184 IWSVGCIFAE 193
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMK-VFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 106
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M L +L ++ Y L Q L+ + + L+Y+H S
Sbjct: 107 -NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 162
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 163 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 255
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V+KA+ G A+K L+ + + E ++K ++H NI+K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCD 517
++ LV E++ L+K L L+ + ++ + + + Y H +V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 518 LKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-GKEGRVSANGD 576
LKP N+L++ ++DFG+A+ + T + T+ Y AP+ + S D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 577 VYSFGIMLME 586
++S G + E
Sbjct: 184 IWSVGCIFAE 193
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVIS 455
IG+G+F V AR + G EVA+K+ + L + K F E + K + H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
E+ LV EY G + YL + + R + SA++Y H + ++H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPEYGKEGRVS 572
DLK N+LLD + ++DFG + ++ T + A G Y APE + +
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 573 A-NGDVYSFGIMLMETFTRKKPTD 595
DV+S G++L + P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 185
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L ++ + T YM+PE +
Sbjct: 186 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 239
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
S D++S G+ L+E + P
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 123
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L ++ + T YM+PE +
Sbjct: 124 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 177
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
S D++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 201
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 202 IILSKGYNKAVDWWALGVLIYE 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 123
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L ++ + T YM+PE +
Sbjct: 124 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 177
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
S D++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 123
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L ++ + T YM+PE +
Sbjct: 124 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 177
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
S D++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 123
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L ++ + T YM+PE +
Sbjct: 124 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 177
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
S D++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
VA +E+L S + IH DL N+LL +N V + DFG+A+ + + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617
+ +MAPE + S DV+S+G++L E F+ G P
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGGS-----------PYPGV 305
Query: 618 EIVDPNLLS--REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667
++ D + S RE + A E ++ + ++C P++R E+V KL
Sbjct: 306 QM-DEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRV---FKSFDVECEMMKSIRHR-N 449
+GRG+FG V +A + VA+K+ L+ G +K+ E +++ I H N
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKM--LKEGATASEYKALMTELKILTHIGHHLN 92
Query: 450 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSN 483
++ ++ +C+ + +V+ EY +G+L YL S
Sbjct: 93 VVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKR 127
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 24/231 (10%)
Query: 378 MQRMFSYLE--LCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKS 434
M + + +E C + + IG+G+FG VFKAR G +VA+K ++ + +
Sbjct: 1 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EG 58
Query: 435 FDV----ECEMMKSIRHRNIIKVISSCSNEEFKA--------LVLEYMPHGSLEKYLHSS 482
F + E ++++ ++H N++ +I C + LV ++ H L L +
Sbjct: 59 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNV 117
Query: 483 NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL- 541
+ + +M + + L Y+H +++H D+K +NVL+ + V L+DFG+A+
Sbjct: 118 LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174
Query: 542 -LTREDQSTIQTQTLATIGYMAPE-YGKEGRVSANGDVYSFGIMLMETFTR 590
L + Q + T+ Y PE E D++ G ++ E +TR
Sbjct: 175 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 400 IGRGSFGSVFK-ARLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISS 456
+G+G+F V + ++ G E A K+ N + R + + E + + ++H NI+++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516
S E L+ + + G L + + + Y Y + + LE + + V+H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 517 DLKPSNVLLDDNM---VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA 573
DLKP N+LL + L+DFG+A + E Q+ T GY++PE ++
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 203
Query: 574 NGDVYSFGIML 584
D+++ G++L
Sbjct: 204 PVDLWACGVIL 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 387 LCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV----ECEM 441
C + + IG+G+FG VFKAR G +VA+K ++ + + F + E ++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 442 MKSIRHRNIIKVISSCSNEEFKA--------LVLEYMPHGSLEKYLHSSNYILDIYQRLN 493
++ ++H N++ +I C + LV ++ H L L + + +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 129
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTREDQSTIQ 551
+M + + L Y+H +++H D+K +NVL+ + V L+DFG+A+ L + Q
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 552 TQTLATIGYMAPE-YGKEGRVSANGDVYSFGIMLMETFTR 590
+ T+ Y PE E D++ G ++ E +TR
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F IG GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 28/223 (12%)
Query: 387 LCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV----ECEM 441
C + + IG+G+FG VFKAR G +VA+K ++ + + F + E ++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 442 MKSIRHRNIIKVISSCSNEEFKA--------LVLEYMPH---GSLEKYLHSSNYILDIYQ 490
++ ++H N++ +I C + LV ++ H G L L + L +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--VKFTLSEIK 128
Query: 491 RLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTREDQS 548
R+ M+ L L++ + +++H D+K +NVL+ + V L+DFG+A+ L + Q
Sbjct: 129 RVMQML-----LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 549 TIQTQTLATIGYMAPE-YGKEGRVSANGDVYSFGIMLMETFTR 590
+ T+ Y PE E D++ G ++ E +TR
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 387 LCRATDGFSEN--NLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS 444
LC+ +G SE +I + F K R D + K Y E ++KS
Sbjct: 54 LCKEKNGHSEKAIKVIKKSQFD---KGRYSDDNKNIEKFHEEIYN--------EISLLKS 102
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMIDVASALE 503
+ H NIIK+ ++++ LV E+ G L E+ ++ + D NIM + S +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF--DECDAANIMKQILSGIC 160
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
YLH ++H D+KP N+LL++ + + DFG++ +++ + L T Y
Sbjct: 161 YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK---LRDRLGTAYY 214
Query: 561 MAPEYGKEGRVSANGDVYSFGIML 584
+APE K+ + + DV+S G+++
Sbjct: 215 IAPEVLKK-KYNEKCDVWSCGVIM 237
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 150
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L ++ + T YM+PE +
Sbjct: 151 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 204
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
S D++S G+ L+E + P
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 44/225 (19%)
Query: 389 RATDGFSEN----NLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDV------ 437
+T GF EN ++GRG V + E A+K+ ++ G F + +V
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 438 ---ECEMMKSIR-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR-- 491
E ++++ + H NII++ + F LV + M G L YL + + R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
+ +++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKL 180
Query: 552 TQTLATIGYMAPE------------YGKEGRVSANGDVYSFGIML 584
T Y+APE YGKE D++S G+++
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 26/277 (9%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + + +G G+ G VFK + G+ +A K+ +L+ ++ + E +++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + Q L + I V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREK 142
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ +++H D+KPSN+L++ L DFG++ L ++ + T YM+PE +
Sbjct: 143 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 196
Query: 569 GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628
S D++S G+ L+E + P +G M + + D++ + + S E
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGS-GSGSMAIFELL-DYIVNEPPPKLPSGVFSLE 254
Query: 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+FV K C +++P +R + K+++
Sbjct: 255 FQDFVNK-------------CLIKNPAERADLKQLMV 278
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ + RH NII +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI---- 88
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 201
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 202 IILSKGYNKAVDWWALGVLIYE 223
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 394 FSENNLIGRGSFGSVFKA--RLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNII 451
+++ IG G++G V A + K+ ++ + E +++ RH N+I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN------IMIDVASALEYL 505
+ +A+ Y+ +E L Y L Q+L+ + + L+Y+
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDL----YKLLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPE 564
H SA V+H DLKPSN+L++ + DFG+A++ E D + T+ +AT Y APE
Sbjct: 161 H---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 565 YGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 255
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ + RH NII +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI---- 88
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 149
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 210 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 44/221 (19%)
Query: 393 GFSEN----NLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDV---------E 438
GF EN ++GRG V + E A+K+ ++ G F + +V E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 439 CEMMKSIR-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR--LNIM 495
++++ + H NII++ + F LV + M G L YL + + R + +
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D +
Sbjct: 121 LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVC 171
Query: 556 ATIGYMAPE------------YGKEGRVSANGDVYSFGIML 584
T Y+APE YGKE D++S G+++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 206
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 145
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 206 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+P G + +L + + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 229
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 230 IILSKGYNKAVDWWALGVLIYE 251
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 149
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 210 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 11/205 (5%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIRHRN 449
D F + +G G+ G V K + G+ +A K+ +L+ ++ + E +++
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD-IYQRLNIMIDVASALEYLHFG 508
I+ + ++ ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREK 133
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ Q++H D+KPSN+L++ L DFG++ L ++ + T YMAPE +
Sbjct: 134 H--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMAPERLQG 187
Query: 569 GRVSANGDVYSFGIMLMETFTRKKP 593
S D++S G+ L+E + P
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAM-KVFNLQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+ K+ ++ + E +++ RH NII +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 149
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 210 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMK-VFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 88
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 237
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMK-VFNLQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 145
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 206 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMK-VFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 140
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 233
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMK-VFNLQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 145
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 206 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 147
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 240
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 92
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 93 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 148
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 241
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 83
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 84 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 139
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 232
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMK-VFNLQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 145
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 206 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 153
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 154 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 213
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 214 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 243
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 145
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 206 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVEC-----EMMKSI 445
D F +G GSFG V + + G AMK+ + Q +V K ++E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKEIEHTLNEKRILQAV 98
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
++K+ S + +V+EY P G + +L + + R + EYL
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMA 562
H S +I+ DLKP N+++D ++DFG+AK ++ +T G Y+A
Sbjct: 158 H---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEYLA 206
Query: 563 PEYGKEGRVSANGDVYSFGIMLME 586
PE + D ++ G+++ E
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 165
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 166 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 225
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 226 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 255
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNII---KVI 454
IG G++G V A + + VA+K + ++ + E +++ RH NII +I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
+ + E+ K + +++ + L K L + + D + + L+Y+H SA V
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIH---SANV 143
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEGR-V 571
+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE +
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 203
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + D++S G +L E + + IF G KH+++
Sbjct: 204 TKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 233
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 41/282 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRN--IIKVIS 455
IG G VF+ A+K NL+ + S+ E + ++ + II++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 134
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-AN 574
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 135 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 575 G----------DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
G DV+S G +L K P +I N L I+DPN
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------------HAIIDPN- 240
Query: 625 LSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+I F E+ + V C P+QRI+ E++
Sbjct: 241 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 276
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 117
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 615 ST 616
+
Sbjct: 235 DS 236
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVEC-----EMMKSI 445
D F +G GSFG V + + G AMK+ + Q +V K ++E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKEIEHTLNEKRILQAV 98
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
++K+ S + +V+EY P G + +L + + R + EYL
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMA 562
H S +I+ DLKP N+++D ++DFG+AK ++ +T G Y+A
Sbjct: 158 H---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEYLA 206
Query: 563 PEYGKEGRVSANGDVYSFGIMLME 586
PE + D ++ G+++ E
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRN--IIKVIS 455
IG G VF+ A+K NL+ + S+ E + ++ + II++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 130
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-AN 574
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 131 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 575 G----------DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
G DV+S G +L K P +I N +++ H + D EI P+
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID----PNHEIEFPD- 243
Query: 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+ +D+ V K C C P+QRI+ E++
Sbjct: 244 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 272
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG GS G V A + G VA+K +L+ + + E +M+ +H N++++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ +V+E++ G+L + + ++ Q + + V AL LH + VIH D+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 579 SFGIMLMETFTRKKP 593
S GIM++E + P
Sbjct: 205 SLGIMVIEMVDGEPP 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG GS G V A + G VA+K +L+ + + E +M+ +H N++++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ +V+E++ G+L + + ++ Q + + V AL LH + VIH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 579 SFGIMLMETFTRKKP 593
S GIM++E + P
Sbjct: 201 SLGIMVIEMVDGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG GS G V A + G VA+K +L+ + + E +M+ +H N++++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ +V+E++ G+L + + ++ Q + + V AL LH + VIH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 153
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 579 SFGIMLMETFTRKKP 593
S GIM++E + P
Sbjct: 212 SLGIMVIEMVDGEPP 226
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 41/282 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRN--IIKVIS 455
IG G VF+ A+K NL+ + S+ E + ++ + II++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 150
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-AN 574
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 151 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 575 G----------DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
G DV+S G +L K P +I N L I+DPN
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------------HAIIDPN- 256
Query: 625 LSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+I F E+ + V C P+QRI+ E++
Sbjct: 257 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 292
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG GS G V A + G VA+K +L+ + + E +M+ +H N++++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ +V+E++ G+L + + ++ Q + + V AL LH + VIH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 151
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 579 SFGIMLMETFTRKKP 593
S GIM++E + P
Sbjct: 210 SLGIMVIEMVDGEPP 224
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 390 ATDGFS---------ENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDVEC 439
+TD FS + +++G G+ V L E A+K+ Q G + E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 440 EMMKSIR-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDV 498
EM+ + HRN++++I E+ LV E M GS+ ++H + ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 499 ASALEYLHFGYSAQVIHCDLKPSNVLLDD-NMVA--HLSDFGIAK-LLTREDQSTIQTQT 554
ASAL++LH + + H DLKP N+L + N V+ + DF + + D S I T
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 555 LAT----IGYMAPE----YGKEGRV-SANGDVYSFGIML 584
L T YMAPE + +E + D++S G++L
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG GS G V A + G VA+K +L+ + + E +M+ +H N++++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ +V+E++ G+L + + ++ Q + + V AL LH + VIH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 196
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 579 SFGIMLMETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEI--VDPNL 624
S GIM++E + P FN E LK + D LP K + V P+L
Sbjct: 255 SLGIMVIEMVDGEPP---YFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL 300
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E + +++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +VLEY P G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 41/282 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRN--IIKVIS 455
IG G VF+ A+K NL+ + S+ E + ++ + II++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 131
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-AN 574
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 132 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 575 G----------DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
G DV+S G +L K P +I N L I+DPN
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------------HAIIDPN- 237
Query: 625 LSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+I F E+ + V C P+QRI+ E++
Sbjct: 238 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 273
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASALEYLHFGYSAQVIH 515
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 127
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE K A
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 576 -DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPIST 616
DV+S GI+L + P D+ + W +N W I +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 117
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 615 ST 616
+
Sbjct: 235 DS 236
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 41/282 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRN--IIKVIS 455
IG G VF+ A+K NL+ + S+ E + ++ + II++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+E + L +L I D ++R + ++ LE +H + ++H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 178
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-AN 574
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 575 G----------DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
G DV+S G +L K P +I N +++ H I+DPN
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLH-----------AIIDPN- 284
Query: 625 LSREDINFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+I F E+ + V C P+QRI+ E++
Sbjct: 285 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 320
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY P G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 115
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 116 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 232
Query: 615 ST 616
+
Sbjct: 233 DS 234
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 117
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 615 ST 616
+
Sbjct: 235 DS 236
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 41/282 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRN--IIKVIS 455
IG G VF+ A+K NL+ + S+ E + ++ + II++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 178
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-AN 574
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 575 G----------DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
G DV+S G +L K P +I N L I+DPN
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------------HAIIDPN- 284
Query: 625 LSREDINFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+I F E+ + V C P+QRI+ E++
Sbjct: 285 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 320
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASALEYLHFGYSAQVIH 515
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 128
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANG 575
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE K A
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 576 -DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPIST 616
DV+S GI+L + P D+ + W +N W I +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
IG GS G V A + G VA+K +L+ + + E +M+ +H N++++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ +V+E++ G+L + ++ ++ Q + + V AL LH + VIH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 273
Query: 519 KPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVY 578
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 579 SFGIMLMETFTRKKP 593
S GIM++E + P
Sbjct: 332 SLGIMVIEMVDGEPP 346
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
IG G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 391 TDGFSENNLIGRGSFGSVFKARL--GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHR 448
TDG+ IG GS+ SV K + ME A+K+ + + ++ +++ +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQHP 76
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NII + + ++ +V E M G L + + + + ++ + +EYLH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH-- 133
Query: 509 YSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+ V+H DLKPSN+L D + DFG AK L R + + T T ++APE
Sbjct: 134 -AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCY-TANFVAPE 190
Query: 565 YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ A D++S G++L T P
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + + +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVFN-LQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457
IG G++G V A + + VA+K + ++ + E +++ RH NII +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASALEYLHFGYS 510
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 147
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQSTIQTQTLATIGYMAPEYGKEG 569
A V+H DLKPSN+LL+ + DFG+A++ + D + + +AT Y APE
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 570 R-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609
+ + + D++S G +L E + + IF G KH+++
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 240
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 117
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 615 ST 616
+
Sbjct: 235 DS 236
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 117
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 615 ST 616
+
Sbjct: 235 DS 236
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 117
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 615 ST 616
+
Sbjct: 235 DS 236
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY P G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMK-SIRHRNIIK 452
F +++G G+ G++ + D +VA+K F D E ++++ S H N+I+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIR 82
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ + +F+ + +E +L++Y+ ++ + + ++ S L +LH S
Sbjct: 83 YFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 513 VIHCDLKPSNVLLD-----DNMVAHLSDFGIAKLLTREDQS-TIQTQTLATIGYMAPE 564
++H DLKP N+L+ + A +SDFG+ K L S + ++ T G++APE
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNAMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V R G AMK+ + V + D E ++++ R
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASALEYL 505
H + + + + V+EY G L + H S + +R ++ SALEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S V++ D+K N++LD + ++DFG+ K D +T++T T Y+APE
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKT-FCGTPEYLAPEV 176
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 391 TDGFSENNLIGRGSFGSVF--KARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSI 445
+D + ++G+GSFG V K ++ G E A+KV + ++ +S E +++K +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H NI+K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 506 HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
H +++H DLKP N+LL+ + + DFG++ T + S + T Y+A
Sbjct: 149 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 202
Query: 563 PEYGKEGRVSANGDVYSFGIML 584
PE G DV+S G++L
Sbjct: 203 PEV-LHGTYDEKCDVWSTGVIL 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 9/187 (4%)
Query: 400 IGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G+FG V + G K N Y + E +M + H +I + +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
++ L+LE++ G L + + +Y + + +N M L+++H ++H D+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDI 175
Query: 519 KPSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGD 576
KP N++ + + + DFG+A T+ + I T AT + APE V D
Sbjct: 176 KPENIMCETKKASSVKIIDFGLA---TKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTD 232
Query: 577 VYSFGIM 583
+++ G++
Sbjct: 233 MWAIGVL 239
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V R G AMK+ + V + D E ++++ R
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASALEYL 505
H + + + + V+EY G L + H S + +R ++ SALEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S V++ D+K N++LD + ++DFG+ K D +T++T T Y+APE
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKT-FCGTPEYLAPEV 176
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 142
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 197
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 198 YNQTVDIWSVGCIMAELLT 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 400 IGRGSFGSVFKARLGD---GMEVAMKVFNLQYGRVFKSFD-VECEMMKSIRHRNIIKVIS 455
+GRGSFG V R+ D G + A+K L+ VF++ + + C + S R I+ +
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSPR---IVPLYG 152
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ + + +E + GSL + + L + L + LEYLH S +++H
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQG-CLPEDRALYYLGQALEGLEYLH---SRRILH 208
Query: 516 CDLKPSNVLL-DDNMVAHLSDFGIAKLLTRE--DQSTIQTQTL-ATIGYMAPEYGKEGRV 571
D+K NVLL D A L DFG A L + +S + + T +MAPE
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
A DV+S M++ P + F G + LK
Sbjct: 269 DAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V R G AMK+ + V + D E ++++ R
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 66
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASALEYL 505
H + + + + V+EY G L + H S + +R ++ SALEYL
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S V++ D+K N++LD + ++DFG+ K D +T++T T Y+APE
Sbjct: 125 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKT-FCGTPEYLAPEV 179
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFD---VECEMMKSIRHRNIIKVI 454
+IGRGS+ V RL + AMKV + + D E + + + + +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
SC E + V+EY+ G L ++ + + + R +++ AL YLH +
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 131
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA 573
I+ DLK NVLLD L+D+G+ K R +T + T Y+APE +
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 189
Query: 574 NGDVYSFGIMLMETFTRKKPTD 595
+ D ++ G+++ E + P D
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFD 211
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMK-----VFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+GRG++G V K R + G +A+K V + + R+ D+ M+++ +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 115
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL------NIMIDVASALEYLHF 507
+ E + +E M SL+K+ ++D Q + I + + ALE+LH
Sbjct: 116 YGALFREGDVWICMELM-DTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA----- 562
S VIH D+KPSNVL++ + DFGI+ L S +T YMA
Sbjct: 172 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAPERIN 226
Query: 563 PEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
PE ++G S D++S GI ++E + P D LK V + P
Sbjct: 227 PELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 276
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 141
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 196
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 197 YNQTVDIWSVGCIMAELLT 215
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
+ K+ S + +V+EY P G + +L + + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFD---VECEMMKSIRHRNIIKVI 454
+IGRGS+ V RL + AMKV + + D E + + + + +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
SC E + V+EY+ G L ++ + + + R +++ AL YLH +
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 127
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA 573
I+ DLK NVLLD L+D+G+ K R +T + T Y+APE +
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 185
Query: 574 NGDVYSFGIMLMETFTRKKPTD 595
+ D ++ G+++ E + P D
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFD 207
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 141
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 196
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 197 YNQTVDIWSVGCIMAELLT 215
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA-TIGYMAPEYG 566
S +I+ DLKP N+L+D ++DFG AK + +T LA T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAPEII 210
Query: 567 KEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 155
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 210
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 211 YNQTVDIWSVGCIMAELLT 229
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFD---VECEMMKSIRHRNIIKVI 454
+IGRGS+ V RL + AMKV + + D E + + + + +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
SC E + V+EY+ G L ++ + + + R +++ AL YLH +
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 142
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA 573
I+ DLK NVLLD L+D+G+ K R +T + T Y+APE +
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 200
Query: 574 NGDVYSFGIMLMETFTRKKPTD 595
+ D ++ G+++ E + P D
Sbjct: 201 SVDWWALGVLMFEMMAGRSPFD 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 438 ECEMMKSIRHRNIIKVISSCS--NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM 495
E ++K + H N++K++ NE+ +V E + G + + D Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYF 143
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
D+ +EYLH+ ++IH D+KPSN+L+ ++ ++DFG++ D + + T+
Sbjct: 144 QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTV 198
Query: 556 ATIGYMAPEYGKEGRVSANG---DVYSFGIML 584
T +MAPE E R +G DV++ G+ L
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D+ ++DFG AK ++ +T G Y+APE
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 195
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 196 IILSKGYNKAVDWWALGVLIYE 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 400 IGRGSFGSVFK-ARLGDGMEVAMK-----VFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
IGRG++GSV K G +A+K V + ++ DV +M+S I++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV---VMRSSDCPYIVQF 86
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD--IYQRLNIMIDVASALEYLHFGYSA 511
+ E + +E M S +K+ +LD I + + I +A+ H +
Sbjct: 87 YGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-----G 566
++IH D+KPSN+LLD + L DFGI+ L S +T+ YMAPE
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 567 KEGRVSANGDVYSFGIMLMETFTRKKP 593
++G DV+S GI L E T + P
Sbjct: 203 RQG-YDVRSDVWSLGITLYELATGRFP 228
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 163
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 218
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 219 YNQTVDIWSVGCIMAELLT 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 143
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 198
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 199 YNQTVDIWSVGCIMAELLT 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYG 566
S +I+ DLKP N+L+D ++DFG AK + T TL T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCGTPEYLAPEII 231
Query: 567 KEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 232 LSKGYNKAVDWWALGVLIYE 251
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 203
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 204 IILSKGYNKAVDWWALGVLIYE 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + S D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+ + E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 399 LIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDV--ECEMMKSIRHRNIIKVIS 455
++G+GSFG V K + E A+KV N + + + E E++K + H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ +V E G L + + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 516 CDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
DLKP N+LL + + + DFG++ Q+T + T Y+APE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 573 ANGDVYSFGIML 584
DV+S G++L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 219
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 167
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 222
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 223 YNQTVDIWSVGCIMAELLT 241
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 389 RATDGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSI 445
R T+ + +G+G+F V + ++ G E A + N + R + + E + + +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
+H NI+++ S S E L+ + + G L + + + Y Y + + LE +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAV 123
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNM---VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+ V+H +LKP N+LL + L+DFG+A + E Q+ T GY++
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLS 181
Query: 563 PEYGKEGRVSANGDVYSFGIML 584
PE ++ D+++ G++L
Sbjct: 182 PEVLRKDPYGKPVDLWACGVIL 203
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 155
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 210
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 211 YNQTVDIWSVGCIMAELLT 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 399 LIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDV--ECEMMKSIRHRNIIKVIS 455
++G+GSFG V K + E A+KV N + + + E E++K + H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ +V E G L + + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 516 CDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
DLKP N+LL + + + DFG++ Q+T + T Y+APE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 573 ANGDVYSFGIML 584
DV+S G++L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV + + G+++A+K + + + K E ++K ++H N+I ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 173
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 228
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 229 YNMTVDIWSVGCIMAELLT 247
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 399 LIGRGSFGSVFKA-RLGDGMEVAMKVF--NLQYGRVFKSFDVECEMMKSI--------RH 447
L+G+G FG+VF RL D ++VA+KV N G S V C + ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 448 RNIIKVISSCSNEEFKALVLEY-MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
+I+++ +E LVLE +P L Y+ + + R V +A+++ H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAAIQHCH 156
Query: 507 FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
S V+H D+K N+L+D A L DFG LL E + T Y PE+
Sbjct: 157 ---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD----GTRVYSPPEW 209
Query: 566 GKEGRVSA-NGDVYSFGIMLMETFTRKKPTD---EIFNGEM 602
+ A V+S GI+L + P + EI E+
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 41/282 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRN--IIKVIS 455
IG G VF+ A+K NL+ + S+ E + ++ + II++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 150
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-AN 574
DLKP+N L+ D M+ L DFGIA + + ++ + T+ YM PE K+ S N
Sbjct: 151 SDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 575 G----------DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
G DV+S G +L K P +I N L I+DPN
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------------HAIIDPN- 256
Query: 625 LSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+I F E+ + V C P+QRI+ E++
Sbjct: 257 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 292
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 399 LIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDV--ECEMMKSIRHRNIIKVIS 455
++G+GSFG V K + E A+KV N + + + E E++K + H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ +V E G L + + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 516 CDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS 572
DLKP N+LL + + + DFG++ Q+T + T Y+APE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 573 ANGDVYSFGIML 584
DV+S G++L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 55/247 (22%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI------RHRNII 451
+G G++G V A R+ + VA+K+ +++ ++ D + K I H N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINAMLNHENVV 68
Query: 452 KVISSCSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMI 496
K + L LEY MP +++ H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ--------------- 113
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556
+ + + YLH + H D+KP N+LLD+ +SDFG+A + ++ + +
Sbjct: 114 -LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 557 TIGYMAPEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VN 609
T+ Y+APE K A DV+S GI+L + P D+ + W +N
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 229
Query: 610 DWLPIST 616
W I +
Sbjct: 230 PWKKIDS 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 21/227 (9%)
Query: 366 GPPNDANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVF--KARLGDGMEVAMKV 423
GP + + P MF +D + ++G+GSFG V K ++ G E A+KV
Sbjct: 27 GPGDHLHATP----GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKV 81
Query: 424 FN---LQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH 480
+ ++ +S E +++K + H NI+K+ ++ + LV E G L +
Sbjct: 82 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 141
Query: 481 SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFG 537
S ++ I+ V S + Y+H +++H DLKP N+LL+ + + DFG
Sbjct: 142 SRKRFSEV-DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFG 197
Query: 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
++ T + S + T Y+APE G DV+S G++L
Sbjct: 198 LS---THFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVIL 240
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 179
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 229
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 230 IILSKGYNKAVDWWALGVLIYE 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 21/227 (9%)
Query: 366 GPPNDANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVF--KARLGDGMEVAMKV 423
GP + + P MF +D + ++G+GSFG V K ++ G E A+KV
Sbjct: 28 GPGDHLHATP----GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKV 82
Query: 424 FN---LQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH 480
+ ++ +S E +++K + H NI+K+ ++ + LV E G L +
Sbjct: 83 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 142
Query: 481 SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFG 537
S ++ I+ V S + Y+H +++H DLKP N+LL+ + + DFG
Sbjct: 143 SRKRFSEV-DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFG 198
Query: 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
++ T + S + T Y+APE G DV+S G++L
Sbjct: 199 LS---THFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVIL 241
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
+ K+ S + +V+EY P G + +L + + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
+ K+ S + +V+EY P G + +L + + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G G E A K + G + + E +++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
IRH NII + N+ L+LE + G L +L + + + + + + Y
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEATQFLKQILDGVHY 123
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAH----LSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S ++ H DLKP N++L D V + L DFGIA + ++ T +
Sbjct: 124 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 177
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVI 200
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 391 TDGFSENNLIGRGSFGSVF--KARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSI 445
+D + ++G+GSFG V K ++ G E A+KV + ++ +S E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H NI+K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 506 HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
H +++H DLKP N+LL+ + + DFG++ T + S + T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 196
Query: 563 PEYGKEGRVSANGDVYSFGIML 584
PE G DV+S G++L
Sbjct: 197 PEV-LHGTYDEKCDVWSTGVIL 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+GRGSFG V + + G + A+K L+ RV + V C + S R I+ + +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPR---IVPLYGAVR 120
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ + +E + GSL + + L + L + LEYLH + +++H D+
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDV 176
Query: 519 KPSNVLL-DDNMVAHLSDFGIAKLLTRE--DQSTIQTQTL-ATIGYMAPEYGKEGRVSAN 574
K NVLL D A L DFG A L + +S + + T +MAPE A
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 236
Query: 575 GDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
D++S M++ P + F G + LK
Sbjct: 237 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFD---VECEMMKSIRHRNIIKVI 454
+IGRGS+ V RL + AM+V + + D E + + + + +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 455 SSCSNEEFKAL-VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV 513
SC E + V+EY+ G L ++ + + + R +++ AL YLH +
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 174
Query: 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSA 573
I+ DLK NVLLD L+D+G+ K R +T + T Y+APE +
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--STFCGTPNYIAPEILRGEDYGF 232
Query: 574 NGDVYSFGIMLMETFTRKKPTD 595
+ D ++ G+++ E + P D
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFD 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G G E A K + G + + E +++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
IRH NII + N+ L+LE + G L +L + + + + + + Y
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEATQFLKQILDGVHY 130
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAH----LSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S ++ H DLKP N++L D V + L DFGIA + ++ T +
Sbjct: 131 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 184
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMK------VFNLQYGRVFKSFDVECEMMKS 444
D + +G G F V K R G G E A K + + + G + + E +++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
IRH NII + N+ L+LE + G L +L + + + + + + Y
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEATQFLKQILDGVHY 144
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAH----LSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S ++ H DLKP N++L D V + L DFGIA + ++ T +
Sbjct: 145 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 198
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVI 221
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 391 TDGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRN 449
+DG+ IG GS+ + ME A+KV + + S ++E +++ +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID--KSKRDPSEEIEI-LLRYGQHPN 82
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
II + + + LV E M G L + + + ++ + +EYLH
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYLH--- 138
Query: 510 SAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
S V+H DLKPSN+L D + DFG AK L R + + T T ++APE
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCY-TANFVAPEV 196
Query: 566 GKEGRVSANGDVYSFGIML 584
K D++S GI+L
Sbjct: 197 LKRQGYDEGCDIWSLGILL 215
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 384 YLELCRATDGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMM 442
Y + +DG+ IG GS+ + ME A+KV + + S ++E ++
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID--KSKRDPSEEIEI-LL 75
Query: 443 KSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL 502
+ +H NII + + + LV E M G L + + + ++ + +
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTV 134
Query: 503 EYLHFGYSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTREDQSTIQTQTLATI 558
EYLH S V+H DLKPSN+L D + DFG AK L R + + T T
Sbjct: 135 EYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCY-TA 189
Query: 559 GYMAPEYGKEGRVSANGDVYSFGIML 584
++APE K D++S GI+L
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 397 NNLIGRGSFGSVFKA---RLGD-----GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHR 448
N +G+G+F +FK +GD EV +KV + + +SF MM + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
+++ C + LV E++ GSL+ YL + ++I +L + +A+A +HF
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFL 129
Query: 509 YSAQVIHCDLKPSNVLL---DDNMVAH-----LSDFGIAKLLTREDQSTIQTQTLATIGY 560
+IH ++ N+LL +D + LSD GI+ +T + +Q + I +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS--ITVLPKDILQER----IPW 183
Query: 561 MAPEYGKEGR-VSANGDVYSFGIMLME 586
+ PE + + ++ D +SFG L E
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 41/282 (14%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRN--IIKVIS 455
IG G VF+ A+K NL+ + S+ E + ++ + II++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+++ +V+E + L +L I D ++R + ++ LE +H + ++H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 178
Query: 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-AN 574
DLKP+N L+ D M+ L DFGIA + + S ++ + + YM PE K+ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSREN 237
Query: 575 G----------DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624
G DV+S G +L K P +I N +++ H I+DPN
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLH-----------AIIDPN- 284
Query: 625 LSREDINFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVT 665
+I F E+ + V C P+QRI+ E++
Sbjct: 285 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 320
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+GRGSFG V + + G + A+K L+ RV + V C + S R I+ + +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPR---IVPLYGAVR 136
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ + +E + GSL + + L + L + LEYLH + +++H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDV 192
Query: 519 KPSNVLL-DDNMVAHLSDFGIAKLLTRE--DQSTIQTQTL-ATIGYMAPEYGKEGRVSAN 574
K NVLL D A L DFG A L + +S + + T +MAPE A
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 252
Query: 575 GDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
D++S M++ P + F G + LK
Sbjct: 253 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 45/242 (18%)
Query: 400 IGRGSFGSVFKA--RLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G+ G V A R+ + VA+K+ +++ ++ E + K + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 457 CSNEEFKALVLEY---------------MPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
+ L LEY MP +++ H + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ----------------LMAG 116
Query: 502 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
+ YLH + H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 562 APEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW------VNDWLPI 614
APE K A DV+S GI+L + P D+ + W +N W I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 615 ST 616
+
Sbjct: 234 DS 235
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 20/236 (8%)
Query: 373 MPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRV 431
MP E ++ + L+ + TD F+ ++G+GSFG V A R G A+K+ L+ V
Sbjct: 1 MPSEDRKQPSNNLDRVKLTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKI--LKKDVV 57
Query: 432 FKSFDVECEMMKS-----IRHRNIIKVISSC-SNEEFKALVLEYMPHGSLEKYLHSSNYI 485
+ DVEC M++ + + + SC + V+EY+ G L ++
Sbjct: 58 IQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKF 117
Query: 486 LDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545
+ Q + +++ L +LH +I+ DLK NV+LD ++DFG+ K +
Sbjct: 118 KEP-QAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD 173
Query: 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE 601
+T + T Y+APE + D +++G++L E + P F+GE
Sbjct: 174 GVTT--REFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP----FDGE 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGME------VAMKVFNLQYGRVFKSFDVECEMMKSI 445
D + +++G G+F V A + +A K + G S + E ++ I
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG----SMENEIAVLHKI 73
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMIDVASALEY 504
+H NI+ + + L+++ + G L ++ + Y RL + V A++Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKY 131
Query: 505 LHFGYSAQVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
LH ++H DLKP N+L LD++ +SDFG++K+ ED ++ + T GY+
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYV 185
Query: 562 APEYGKEGRVSANGDVYSFGIM 583
APE + S D +S G++
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVI 207
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+GRGSFG V + + G + A+K L+ RV + V C + S R I+ + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPR---IVPLYGAVR 134
Query: 459 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL 518
+ + +E + GSL + + L + L + LEYLH + +++H D+
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDV 190
Query: 519 KPSNVLL-DDNMVAHLSDFGIAKLLTRE--DQSTIQTQTL-ATIGYMAPEYGKEGRVSAN 574
K NVLL D A L DFG A L + +S + + T +MAPE A
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 250
Query: 575 GDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
D++S M++ P + F G + LK
Sbjct: 251 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDV-ECEMMKSIR 446
R F +GRG FG VF+A+ D A+K L + + + E + + +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 447 HRNIIKVISS------------CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR--L 492
H I++ ++ S + + + ++ +L+ +++ I + + L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTI- 550
+I + +A A+E+LH S ++H DLKPSN+ + V + DFG+ + + E++ T+
Sbjct: 122 HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 551 --------QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T YM+PE S D++S G++L E
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + D+G+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 163
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 218
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 219 YNQTVDIWSVGCIMAELLT 237
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 400 IGRGSFGSVFKARLGD---GMEVAMKVFNLQYGRVFKSFD-VECEMMKSIRHRNIIKVIS 455
+GRGSFG V R+ D G + A+K L+ VF++ + + C + S R I+ +
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSPR---IVPLYG 133
Query: 456 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515
+ + + +E + GSL + + L + L + LEYLH S +++H
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQG-CLPEDRALYYLGQALEGLEYLH---SRRILH 189
Query: 516 CDLKPSNVLL-DDNMVAHLSDFGIAKLLTREDQST---IQTQTLATIGYMAPEYGKEGRV 571
D+K NVLL D A L DFG A L + T +MAPE
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 572 SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK 605
A DV+S M++ P + F G + LK
Sbjct: 250 DAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 219
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 154
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 209
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 210 YNQTVDIWSVGCIMAELLT 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V R G AMK+ + V + D E ++++ R
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASALEYL 505
H + + + + V+EY G L + H S + +R ++ SALEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S V++ D+K N++LD + ++DFG+ K D +T++ T Y+APE
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKX-FCGTPEYLAPEV 176
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V R G AMK+ + V + D E ++++ R
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASALEYL 505
H + + + + V+EY G L + H S + +R ++ SALEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S V++ D+K N++LD + ++DFG+ K D +T++ T Y+APE
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKX-FCGTPEYLAPEV 176
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V R G AMK+ + V + D E ++++ R
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 68
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASALEYL 505
H + + + + V+EY G L + H S + +R ++ SALEYL
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S V++ D+K N++LD + ++DFG+ K D +T++ T Y+APE
Sbjct: 127 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKX-FCGTPEYLAPEV 181
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V R G AMK+ + V + D E ++++ R
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASALEYL 505
H + + + + V+EY G L + H S + +R ++ SALEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H S V++ D+K N++LD + ++DFG+ K D +T++ T Y+APE
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKX-FCGTPEYLAPEV 176
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
+G+G F F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 139
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYGKEGRVSA 573
H DLK N+ L++++ + DFG+A T+ + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW 611
DV+S G ++ K P + E L+ N++
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 21/202 (10%)
Query: 400 IGRGSFGSV---FKARLGDGMEVAMKVFNLQYGRVFKSFDV--ECEMMKSIRHRNIIKVI 454
+G G++GSV + ARL +VA+K + + + + E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 455 S----SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ S E+F + L G+ + S + D + + ++ + L+Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG- 569
A +IH DLKPSNV ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPEIMLNWM 204
Query: 570 RVSANGDVYSFGIMLMETFTRK 591
+ D++S G ++ E K
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IIISKGYNKAVDWWALGVLIYE 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
+G+G F F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 139
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYGKEGRVSA 573
H DLK N+ L++++ + DFG+A T+ + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW 611
DV+S G ++ K P + E L+ N++
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
+G+G F F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 143
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYGKEGRVSA 573
H DLK N+ L++++ + DFG+A T+ + + +TL T Y+APE + S
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW 611
DV+S G ++ K P + E L+ N++
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 238
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 167
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E + AT Y APE
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV-----ATRWYRAPEIMLNWMH 222
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 223 YNQTVDIWSVGCIMAELLT 241
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 398 NLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFDVEC-----EMMKSIRHRNII 451
+IGRG+FG V +L + +V AMK+ N + K + C +++ + + I
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILN--KWEMLKRAETACFREERDVLVNGDSKWIT 137
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ + ++ LV++Y G L L L + ++ A++ +H
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QL 194
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY-----G 566
+H D+KP N+L+D N L+DFG + L ED + + + T Y++PE G
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 567 KEGRVSANGDVYSFGIMLMETFTRKKP 593
+GR D +S G+ + E + P
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQ 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 390 ATDGFSENNLIGRGSFGSVFKARLGDGME-VAMKVFNLQYGR--VFKSFDVECEMMKSIR 446
+ D + +G G++G V+KA E VA+K L++ V + E ++K ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
HRNII++ S + L+ EY L+KY+ + D+ R+ I + + ++
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRV-IKSFLYQLINGVN 146
Query: 507 FGYSAQVIHCDLKPSNVLL-----DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561
F +S + +H DLKP N+LL + V + DFG+A+ + T + T+ Y
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIITLWYR 204
Query: 562 APEYGKEGR-VSANGDVYS----FGIMLMET--FTRKKPTDEIFN 599
PE R S + D++S + MLM+T F D++F
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 391 TDGFSENNLIGRGSFGSVF--KARLGDGMEVAMKVFN---LQYGRVFKSFDVECEMMKSI 445
+D + ++G+GSFG V K ++ G E A+KV + ++ +S E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
H NI K+ ++ + LV E G L + S ++ I+ V S + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 506 HFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
H +++H DLKP N+LL+ + + DFG++ T + S + T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYYIA 196
Query: 563 PEYGKEGRVSANGDVYSFGIML 584
PE G DV+S G++L
Sbjct: 197 PEV-LHGTYDEKCDVWSTGVIL 217
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 54/240 (22%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR----------HR 448
+G+G++G V+K+ G VA+K ++F +F + ++ R H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-------KIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 449 NIIKVIS--SCSNEEFKALVLEYMPHGSLEKYLHS--SNYILDIYQRLNIMIDVASALEY 504
NI+ +++ N+ LV +YM E LH+ IL+ + ++ + ++Y
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKY 124
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-------------------E 545
LH S ++H D+KPSN+LL+ ++DFG+++ +
Sbjct: 125 LH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANG-DVYSFGIMLMETFTRKKPTDEIFNGEMTL 604
D I T +AT Y APE G D++S G +L E K IF G T+
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK----PIFPGSSTM 237
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 397 NNLIGRGSFGSVFKA---RLGD-----GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHR 448
N +G+G+F +FK +GD EV +KV + + +SF MM + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
+++ C + LV E++ GSL+ YL + ++I +L + +A A +HF
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFL 129
Query: 509 YSAQVIHCDLKPSNVLL---DDNMVAH-----LSDFGIAKLLTREDQSTIQTQTLATIGY 560
+IH ++ N+LL +D + LSD GI+ +T + +Q + I +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS--ITVLPKDILQER----IPW 183
Query: 561 MAPEYGKEGR-VSANGDVYSFGIMLME 586
+ PE + + ++ D +SFG L E
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 434 SFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRL 492
S + E ++ I+H NI+ + + L+++ + G L ++ + Y RL
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTREDQST 549
+ V A++YLH ++H DLKP N+L LD++ +SDFG++K+ ED +
Sbjct: 122 --IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGS 173
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 583
+ + T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
S +I+ DLKP N+L+D ++DFG AK ++ +T G PEY
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG--TPEYLA 206
Query: 568 EGRVSANG-----DVYSFGIMLME 586
+ + G D ++ G+++ E
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYE 230
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFN----LQYGRVFKSFDVECEMMKSIR 446
D F +IGRG+F V ++ G AMK+ N L+ G V F E +++ +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV-SCFREERDVLVNGD 119
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
R I ++ + +E + LV+EY G L L + + ++ A++ +H
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 507 -FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE- 564
GY +H D+KP N+LLD L+DFG + L R D + + T Y++PE
Sbjct: 180 RLGY----VHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 565 ------YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
G D ++ G+ E F + P
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 434 SFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRL 492
S + E ++ I+H NI+ + + L+++ + G L ++ + Y RL
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTREDQST 549
+ V A++YLH ++H DLKP N+L LD++ +SDFG++K+ ED +
Sbjct: 122 --IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGS 173
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 583
+ + T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGDGME-VAMKVFNLQY--GRVFKSFDVECEMMKSIRHR 448
D + +++G G+F V A + VA+K + G+ S + E ++ I+H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHP 76
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
NI+ + + L+++ + G L ++ + Y RL + V A++YLH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH- 133
Query: 508 GYSAQVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
++H DLKP N+L LD++ +SDFG++K+ ED ++ + T GY+APE
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPE 188
Query: 565 YGKEGRVSANGDVYSFGIM 583
+ S D +S G++
Sbjct: 189 VLAQKPYSKAVDCWSIGVI 207
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 25/220 (11%)
Query: 400 IGRGSFGSV-FKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS 458
+G G F V L DG A+K + + E +M + H NI+++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 459 NEEFKA----LVLEYMPHGSL----EKYLHSSNYILDIYQRLNIMIDVASALEYLHF-GY 509
E L+L + G+L E+ N++ + Q L +++ + LE +H GY
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED-QILWLLLGICRGLEAIHAKGY 155
Query: 510 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-------ATIGYMA 562
+ H DLKP+N+LL D L D G + + Q TL TI Y A
Sbjct: 156 A----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 563 PE---YGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFN 599
PE + DV+S G +L + P D +F
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMK-----VFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453
+GRG++G V K R + G +A+K V + + R+ D+ M+++ +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 71
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL------NIMIDVASALEYLHF 507
+ E + +E M SL+K+ ++D Q + I + + ALE+LH
Sbjct: 72 YGALFREGDVWICMELM-DTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA----- 562
S VIH D+KPSNVL++ + DFGI+ L + I YMA
Sbjct: 128 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERIN 182
Query: 563 PEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613
PE ++G S D++S GI ++E + P D LK V + P
Sbjct: 183 PELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 232
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 399 LIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNI------ 450
L+G G++G V+K R + G A+KV ++ G + E M+K HRNI
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 451 -IKVISSCSNEEFKALVLEYMPHGSLEKYL-HSSNYILDIYQRLNIMIDVASALEYLHFG 508
IK +++ LV+E+ GS+ + ++ L I ++ L +LH
Sbjct: 90 FIKKNPPGMDDQL-WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH-- 146
Query: 509 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT-LATIGYMAPEY-- 565
+VIH D+K NVLL +N L DFG++ L D++ + T + T +MAPE
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAPEVIA 202
Query: 566 ---GKEGRVSANGDVYSFGIMLME 586
+ D++S GI +E
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIE 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDQSTI 550
L+I I +A A+E+LH S ++H DLKPSN+ + V + DFG+ + + E++ T+
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 551 QTQTLA---------TIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T A T YM+PE S D++S G++L E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E + AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV-----ATRWYRAPEIMLNWMH 219
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 28/163 (17%)
Query: 436 DVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 489
+ E E++K + H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 546
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 261 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---G 307
Query: 547 QSTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLM 585
++++ T Y+APE G G A D +S G++L
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 349
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + FG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 28/163 (17%)
Query: 436 DVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 489
+ E E++K + H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 546
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 247 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---G 293
Query: 547 QSTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLM 585
++++ T Y+APE G G A D +S G++L
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 335
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 195
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + D G+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 46/218 (21%)
Query: 436 DVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 489
+ E E++K + H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 546
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---G 168
Query: 547 QSTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEM 602
++++ T Y+APE G G A D +S G++L + P E ++
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGYPPFSE-HRTQV 226
Query: 603 TLKHWVND---------WLPISTKE--------IVDPN 623
+LK + W +S K +VDP
Sbjct: 227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 264
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 18/236 (7%)
Query: 366 GPPNDANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVF 424
G P+D N E M+ + + + F L+G+G+FG V + G AMK+
Sbjct: 126 GSPSD-NSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL 184
Query: 425 NLQYGRVFKSFD------VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKY 478
+ V + D E ++++ RH + + S + V+EY G L +
Sbjct: 185 KKE---VIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--F 239
Query: 479 LHSSNYILDIYQRLNIM-IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537
H S + R ++ SAL+YLH V++ DLK N++LD + ++DFG
Sbjct: 240 FHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFG 297
Query: 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ K + D +T++T T Y+APE ++ D + G+++ E + P
Sbjct: 298 LCKEGIK-DGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 391 TDGFSENNLIGRGSFGSVFKARLGDGM--EVAMKVFNLQYGRVFKSFDVECEMMKSIRHR 448
TDG+ IG GS+ SV K + E A+K+ + + ++ +++ +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYGQHP 76
Query: 449 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFG 508
NII + + ++ +V E G L + + + + ++ + +EYLH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH-- 133
Query: 509 YSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+ V+H DLKPSN+L D + DFG AK L R + + T T ++APE
Sbjct: 134 -AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXTPCY-TANFVAPE 190
Query: 565 YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ A D++S G++L T P
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 18/236 (7%)
Query: 366 GPPNDANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVF 424
G P+D N E M+ + + + F L+G+G+FG V + G AMK+
Sbjct: 123 GSPSD-NSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL 181
Query: 425 NLQYGRVFKSFD------VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKY 478
+ V + D E ++++ RH + + S + V+EY G L +
Sbjct: 182 KKE---VIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--F 236
Query: 479 LHSSNYILDIYQRLNIM-IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537
H S + R ++ SAL+YLH V++ DLK N++LD + ++DFG
Sbjct: 237 FHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFG 294
Query: 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ K + D +T++T T Y+APE ++ D + G+++ E + P
Sbjct: 295 LCKEGIK-DGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 200 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + D G+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 46/218 (21%)
Query: 436 DVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 489
+ E E++K + H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 546
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 128 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---G 174
Query: 547 QSTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEM 602
++++ T Y+APE G G A D +S G++L + P E ++
Sbjct: 175 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGYPPFSE-HRTQV 232
Query: 603 TLKHWVND---------WLPISTKE--------IVDPN 623
+LK + W +S K +VDP
Sbjct: 233 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 270
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 202 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
+G+G F F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 163
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYGKEGRVSA 573
H DLK N+ L++++ + DFG+A T+ + + + L T Y+APE + S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW 611
DV+S G ++ K P + E L+ N++
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 258
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 28/162 (17%)
Query: 436 DVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 489
+ E E++K + H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 546
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---G 168
Query: 547 QSTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIML 584
++++ T Y+APE G G A D +S G++L
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVIL 209
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 207 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DFG+A+ E +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 28/162 (17%)
Query: 436 DVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 489
+ E E++K + H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 546
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 121 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---G 167
Query: 547 QSTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIML 584
++++ T Y+APE G G A D +S G++L
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVIL 208
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRN 449
+D F + +GRG+ V++ + G A+KV + K E ++ + H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY 509
IIK+ +LVLE + G L + Y Y + V LE + + +
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY----YSERDAADAVKQILEAVAYLH 165
Query: 510 SAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
++H DLKP N+L + ++DFG++K++ E Q ++T T GY APE
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKT-VCGTPGYCAPEIL 222
Query: 567 KEGRVSANGDVYSFGIM 583
+ D++S GI+
Sbjct: 223 RGCAYGPEVDMWSVGII 239
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 28/162 (17%)
Query: 436 DVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 489
+ E E++K + H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 546
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---G 168
Query: 547 QSTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIML 584
++++ T Y+APE G G A D +S G++L
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVIL 209
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G+ VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + D G+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 498 VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLAT 557
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + + DV+SFG++L E F+
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 394 FSENNLIGRGSFGSVFKARLGD-----GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHR 448
F + +G GS+G VFK R + ++ +M F R K +V K +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHE-KVGQHP 117
Query: 449 NIIKVISSCSNEEFKALVLEYMPHG-SLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
+++ + EE L L+ G SL+++ + L Q + D AL +LH
Sbjct: 118 CCVRLEQAW--EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH- 174
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK 567
S ++H D+KP+N+ L L DFG+ L +Q YMAPE
Sbjct: 175 --SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPEL-L 228
Query: 568 EGRVSANGDVYSFGIMLMET 587
+G DV+S G+ ++E
Sbjct: 229 QGSYGTAADVFSLGLTILEV 248
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
+G+G F F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 161
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYGKEGRVSA 573
H DLK N+ L++++ + DFG+A T+ + + + L T Y+APE + S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW 611
DV+S G ++ K P + E L+ N++
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 256
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 400 IGRGSFGSV---FKARLGDGMEVAMKVFNLQYGRVFKSFDV--ECEMMKSIRHRNIIKVI 454
+G G++GSV + ARL +VA+K + + + + E ++K ++H N+I ++
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 455 S----SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ S E+F + L G+ + + D + + ++ + L+Y+H S
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---S 141
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG- 569
A +IH DLKPSNV ++++ + DFG+A+ E T +AT Y APE
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWYRAPEIMLNWM 196
Query: 570 RVSANGDVYSFGIMLMETFTRK 591
+ D++S G ++ E K
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 400 IGRGSFGSV---FKARLGDGMEVAMKVFNLQYGRVFKSFDV--ECEMMKSIRHRNIIKVI 454
+G G++GSV + ARL +VA+K + + + + E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 455 S----SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ S E+F + L G+ + + D + + ++ + L+Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG- 569
A +IH DLKPSNV ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPEIMLNWM 204
Query: 570 RVSANGDVYSFGIMLMETFTRK 591
+ D++S G ++ E K
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 399 LIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKSIRHRNIIKVI 454
+G+G F F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVI 514
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 137
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAPEYGKEGRVSA 573
H DLK N+ L++++ + DFG+A T+ + + + L T Y+APE + S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 574 NGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW 611
DV+S G ++ K P + E L+ N++
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 232
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 392 DGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDV---ECEMMKSIRH 447
D F +G GSFG V + + G AMK+ + Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 448 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507
++K+ S + +V+EY+ G + +L + + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG---YMAPE 564
S +I+ DLKP N+L+D ++DFG AK ++ +T G +APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEALAPE 208
Query: 565 YGKEGRVSANGDVYSFGIMLME 586
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 26/224 (11%)
Query: 386 ELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMK-VFN-LQYGRVF---------KS 434
EL ++ I GS+G+V +G+ VA+K VFN + GR K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 435 FDVECEMMKSIRHRNIIKVISSCSNEEFKA-----LVLEYMPHGSLEKYLHSSNYILDIY 489
E ++ H NI+ + + E A LV E M L + +H ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549
M + L LH A V+H DL P N+LL DN + DF +A RED +
Sbjct: 135 HIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLA----REDTAD 187
Query: 550 I-QTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRK 591
+T + Y APE + + + D++S G ++ E F RK
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 26/224 (11%)
Query: 386 ELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMK-VFN-LQYGRVF---------KS 434
EL ++ I GS+G+V +G+ VA+K VFN + GR K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 435 FDVECEMMKSIRHRNIIKVISSCSNEEFKA-----LVLEYMPHGSLEKYLHSSNYILDIY 489
E ++ H NI+ + + E A LV E M L + +H ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 490 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549
M + L LH A V+H DL P N+LL DN + DF +A RED +
Sbjct: 135 HIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLA----REDTAD 187
Query: 550 I-QTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRK 591
+T + Y APE + + + D++S G ++ E F RK
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 397 NNLIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYG----RVFKSFDVECEMMKSIRHRNII 451
+ L+G G++ V A L +G E A+K+ Q G RVF+ + + + ++NI+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVET---LYQCQGNKNIL 74
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
++I ++ LV E + GS+ ++ + + + ++ DVA+AL++LH +
Sbjct: 75 ELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAAALDFLH---TK 130
Query: 512 QVIHCDLKPSNVLLDDNMV---AHLSDFGIAKLLTREDQST-IQTQTLAT----IGYMAP 563
+ H DLKP N+L + + DF + + + T I T L T YMAP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 564 EY-----GKEGRVSANGDVYSFGIML 584
E + D++S G++L
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 438 ECEMMKSIRHRNIIKVISSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIM 495
E ++++ +RH+N+I+++ NEE + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555
+ LEYLH S ++H D+KP N+LL +S G+A+ L +
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 556 ATIGYMAPEYGKEGRVSANG---DVYSFGIMLMETFT 589
+ + PE G + +G D++S G+ L T
Sbjct: 173 GSPAFQPPEIAN-GLDTFSGFKVDIWSAGVTLYNITT 208
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 19/196 (9%)
Query: 400 IGRGSFGSV---FKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
IG G+ G V F LG + V Q K E ++K + H+NII +++
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 457 CSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ EEF+ LV+E M +L + +H LD + ++ + +++LH S
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLH---S 144
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR 570
A +IH DLKPSN+++ + + DFG+A+ + + T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC---TNFMMTPYVVTRYYRAPEVILGMG 201
Query: 571 VSANGDVYSFGIMLME 586
+AN D++S G ++ E
Sbjct: 202 YAANVDIWSVGCIMGE 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERM 121
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 122 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 175
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 10/209 (4%)
Query: 389 RATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKS 444
R + +G+G F ++ D EV A KV L + E + KS
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+ + +++ +++F +VLE SL + LH + + M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
LH + +VIH DLK N+ L+D+M + DFG+A + E + T Y+APE
Sbjct: 142 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPE 196
Query: 565 YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ S D++S G +L K P
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 35/216 (16%)
Query: 398 NLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
+IGRG+FG V ++ + + AMK+ N + K + C R + V
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILN--KWEMLKRAETAC-----FREERDVLVNGD 132
Query: 457 CS----------NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNI--MIDVASALE 503
C +E LV++Y G L L + + + R I M+ ++
Sbjct: 133 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMA 562
LH+ +H D+KP NVLLD N L+DFG L D T+Q+ + T Y++
Sbjct: 193 QLHY------VHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYIS 244
Query: 563 PEYGKE-----GRVSANGDVYSFGIMLMETFTRKKP 593
PE + G+ D +S G+ + E + P
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 35/216 (16%)
Query: 398 NLIGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
+IGRG+FG V ++ + + AMK+ N + K + C R + V
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKW--EMLKRAETAC-----FREERDVLVNGD 148
Query: 457 CS----------NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNI--MIDVASALE 503
C +E LV++Y G L L + + + R I M+ ++
Sbjct: 149 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ-TLATIGYMA 562
LH+ +H D+KP NVLLD N L+DFG L D T+Q+ + T Y++
Sbjct: 209 QLHY------VHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYIS 260
Query: 563 PEYGKE-----GRVSANGDVYSFGIMLMETFTRKKP 593
PE + G+ D +S G+ + E + P
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H NI+K+ ++ LV+E + G L + + + + + IM + SA+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 507 FGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAP 563
V+H DLKP N+L +DN+ + DFG A+L ++Q ++T T+ Y AP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCF-TLHYAAP 178
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
E + + D++S G++L + + P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 12/210 (5%)
Query: 389 RATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKS 444
R + +G+G F ++ D EV A KV L + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+ + +++ +++F +VLE SL + LH + + M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL-ATIGYMAP 563
LH + +VIH DLK N+ L+D+M + DFG+A T+ + + +TL T Y+AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKKTLCGTPNYIAP 211
Query: 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
E + S D++S G +L K P
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFK------SFDVECEM 441
+ D + +G G F V K R G+E A K + R + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
++ + H N+I + N L+LE + G L +L + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 502 LEYLHFGYSAQVIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
+ YLH + ++ H DLKP N+ LLD N+ + H+ DFG+A + ED + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGT 181
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIM 583
++APE + D++S G++
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVIS- 455
+G G++GSV A G VA+K + + + K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 456 ---SCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-R 570
+IH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 571 VSANGDVYSFGIMLMETFT 589
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFK------SFDVECEM 441
+ D + +G G F V K R G+E A K + R + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
++ + H N+I + N L+LE + G L +L + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 502 LEYLHFGYSAQVIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
+ YLH + ++ H DLKP N+ LLD N+ + H+ DFG+A + ED + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGT 181
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIM 583
++APE + D++S G++
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPAF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFK------SFDVECEM 441
+ D + +G G F V K R G+E A K + R + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
++ + H N+I + N L+LE + G L +L + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 502 LEYLHFGYSAQVIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
+ YLH + ++ H DLKP N+ LLD N+ + H+ DFG+A + ED + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGT 181
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIM 583
++APE + D++S G++
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFK------SFDVECEM 441
+ D + +G G F V K R G+E A K + R + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
++ + H N+I + N L+LE + G L +L + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 502 LEYLHFGYSAQVIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
+ YLH + ++ H DLKP N+ LLD N+ + H+ DFG+A + ED + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGT 181
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIM 583
++APE + D++S G++
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 389 RATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKS 444
R + +G+G F ++ D EV A KV L + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+ + +++ +++F +VLE SL + LH + + M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
LH + +VIH DLK N+ L+D+M + DFG+A + + + + T Y+APE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPE 212
Query: 565 YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ S D++S G +L K P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFK------SFDVECEM 441
+ D + +G G F V K R G+E A K + R + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASA 501
++ + H N+I + N L+LE + G L +L + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 502 LEYLHFGYSAQVIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
+ YLH + ++ H DLKP N+ LLD N+ + H+ DFG+A + ED + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGT 181
Query: 558 IGYMAPEYGKEGRVSANGDVYSFGIM 583
++APE + D++S G++
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 10/209 (4%)
Query: 389 RATDGFSENNLIGRGSFGSVFKARLGDGMEV-AMKVFN---LQYGRVFKSFDVECEMMKS 444
R + +G+G F ++ D EV A KV L + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+ + +++ +++F +VLE SL + LH + + M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
LH + +VIH DLK N+ L+D+M + DFG+A + E + T Y+APE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPE 212
Query: 565 YGKEGRVSANGDVYSFGIMLMETFTRKKP 593
+ S D++S G +L K P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 128
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 182
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVI 205
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 400 IGRGSFGSVFKARLG-DGMEVAMKVF--NLQYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
+G G++G+V A G G +VA+K Q K E ++K +RH N+I ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 457 CSNEEFKA------LVLEYMPH--GSLEKY--LHSSNYILDIYQRLNIMIDVASALEYLH 506
+ +E LV+ +M G L K+ L +YQ L L Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK-------GLRYIH 145
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
+A +IH DLKP N+ ++++ + DFG+A+ E + T+ Y APE
Sbjct: 146 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVI 197
Query: 567 KEG-RVSANGDVYSFGIMLMETFTRK 591
R + D++S G ++ E T K
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 128
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 182
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVI 205
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 400 IGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFK------SFDVECEMMKSIRHRNIIK 452
+G G F V K R G+E A K + R + + E +++ + H NII
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ 512
+ N L+LE + G L +L + L + + + + + YLH + +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 513 VIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+ H DLKP N+ LLD N+ + H+ DFG+A + ED + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGTPEFVAPEIVNY 192
Query: 569 GRVSANGDVYSFGIM 583
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 363 RERGPPNDA-NMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAM 421
RE G + + E ++++F + E T FSE L + G +F + +
Sbjct: 4 RENGESSSSWKKQAEDIKKIFEFKETL-GTGAFSEVVLAEEKATGKLFAVKC-----IPK 57
Query: 422 KVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS 481
K + S + E +++ I+H NI+ + + LV++ + G L +
Sbjct: 58 KALKGKES----SIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVE 113
Query: 482 SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGI 538
+ Y + + L+ +++ + ++H DLKP N+L D+ +SDFG+
Sbjct: 114 KGF----YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGL 169
Query: 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 583
+K+ E + + + T GY+APE + S D +S G++
Sbjct: 170 SKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 118/290 (40%), Gaps = 46/290 (15%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSI-RHRNII 451
+G G+FG V +A + M VA+K+ + + E +++ + H NI+
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQRL-------NI 494
++ +C+ ++ EY +G L +L +S I++ + +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA + +L S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 151 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI 614
+ +MAPE + DV+S+GI L E F+ + G +P+
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---YPG-----------MPV 253
Query: 615 STKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664
+K + +E ++ E + ++++ C P +R K+IV
Sbjct: 254 DSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G+++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 121
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 122 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 175
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 392 DGFSENNLIGRGSFGSVFKA-RLGDGMEVAMKV-----FNLQYGRVFKSFDVECEMMKSI 445
D + +IG+G+F V + G + A+K+ F G + E + +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL 505
+H +I++++ + S++ +V E+M L + +Y + LE L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 506 HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562
+ + +IH D+KP NVLL +++ L DFG+A L + + + T +MA
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFMA 201
Query: 563 PEYGKEGRVSANGDVYSFGIMLMETFTRKKP----TDEIFNGEMTLKHWVN--DWLPIS 615
PE K DV+ G++L + P + +F G + K+ +N W IS
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 260
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G+++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
+GRG FG V + + M F G E ++ RHRNI+ + S +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519
E ++ E++ + + +++S + L+ + ++ + V AL++LH S + H D++
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIR 129
Query: 520 PSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDV 577
P N++ + + +FG A+ L D + Y APE + VS D+
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTATDM 186
Query: 578 YSFGIMLMETF---------TRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628
+S G ++ T ++ + I N E T + I + VD L+
Sbjct: 187 WSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKER 246
Query: 629 DINFVAKE 636
A E
Sbjct: 247 KSRMTASE 254
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 118/290 (40%), Gaps = 46/290 (15%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSI-RHRNII 451
+G G+FG V +A + M VA+K+ + + E +++ + H NI+
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQRL-------NI 494
++ +C+ ++ EY +G L +L +S I++ + +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA + +L S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 174 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI 614
+ +MAPE + DV+S+GI L E F+ + G +P+
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL---GSSPYPG-----------MPV 276
Query: 615 STKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664
+K + +E ++ E + ++++ C P +R K+IV
Sbjct: 277 DSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 122
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 123 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 176
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 127
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 128 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 181
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 233
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 374 PPEAMQRMFSYLELCRA--TDGFSENNLIGRGSFGSVFKARLGD-GMEVAMK-------- 422
PP+A++ L C + +S + +G G+FG V+ A + EV +K
Sbjct: 6 PPKAVE--LEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL 63
Query: 423 ----VFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGS-LEK 477
+ + + G+V +E ++ + H NIIKV+ N+ F LV+E HGS L+
Sbjct: 64 EDCWIEDPKLGKV----TLEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDL 117
Query: 478 YLHSSNYILDIYQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVA 531
+ +D + RL+ I + SA+ YL +IH D+K N+++ ++
Sbjct: 118 FA-----FIDRHPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTI 169
Query: 532 HLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
L DFG A L R + TI Y APE
Sbjct: 170 KLIDFGSAAYLER---GKLFYTFCGTIEYCAPE 199
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS 444
L + +D + IG G+FG R E+ + + ++ + E +S
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRS 71
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVA 499
+RH NI++ A+V+EY G L E+ ++ + D +Q+L
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------I 125
Query: 500 SALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
S + Y H + QV H DLK N LLD + L DFG +K S + +Q +T
Sbjct: 126 SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKST 176
Query: 558 IG---YMAPEY----GKEGRVSANGDVYSFGIML 584
+G Y+APE +G+V+ DV+S G+ L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 400 IGRGSFGSV---FKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS 456
IG G+ G V F LG + V Q K E ++K + H+NII +++
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 457 CSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ EEF+ LV+E M +L + +H LD + ++ + +++LH S
Sbjct: 90 FTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLH---S 142
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR 570
A +IH DLKPSN+++ + + DFG+A+ + + + T + T Y APE
Sbjct: 143 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS---TNFMMTPYVVTRYYRAPEVILGMG 199
Query: 571 VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
N D++S G ++ E IF G + W
Sbjct: 200 YKENVDIWSVGCIMGELVK----GSVIFQGTDHIDQW 232
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 166
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 167 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 220
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 129
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 183
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 122
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 123 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 176
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSI-RHRNII 451
+G G+FG V +A + M VA+K+ + + E +++ + H NI+
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQRL-------NI 494
++ +C+ ++ EY +G L +L +S I++ + +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA + +L S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 167 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589
+ +MAPE + DV+S+GI L E F+
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 129
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 183
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 166
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 167 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 220
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+LE + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 118/290 (40%), Gaps = 46/290 (15%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSI-RHRNII 451
+G G+FG V +A + M VA+K+ + + E +++ + H NI+
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQRL-------NI 494
++ +C+ ++ EY +G L +L +S I++ + +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA + +L S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 174 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI 614
+ +MAPE + DV+S+GI L E F+ + G +P+
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL---GSSPYPG-----------MPV 276
Query: 615 STKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664
+K + +E ++ E + ++++ C P +R K+IV
Sbjct: 277 DSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS 444
L + +D + IG G+FG R E+ + + ++ ++ E +S
Sbjct: 11 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRS 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVA 499
+RH NI++ A+V+EY G L E+ ++ + D +Q+L
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------I 124
Query: 500 SALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
S + Y H + QV H DLK N LLD + L DFG +K S + +Q +T
Sbjct: 125 SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKST 175
Query: 558 IG---YMAPEY----GKEGRVSANGDVYSFGIML 584
+G Y+APE +G+V+ DV+S G+ L
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 206
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 118/290 (40%), Gaps = 46/290 (15%)
Query: 400 IGRGSFGSVFKA------RLGDGMEVAMKVFNLQYGRVFK-SFDVECEMMKSI-RHRNII 451
+G G+FG V +A + M VA+K+ + + E +++ + H NI+
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQRL-------NI 494
++ +C+ ++ EY +G L +L +S I++ + +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 495 MIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554
VA + +L S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 169 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI 614
+ +MAPE + DV+S+GI L E F+ + G +P+
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---YPG-----------MPV 271
Query: 615 STKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664
+K + +E ++ E + ++++ C P +R K+IV
Sbjct: 272 DSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552
+ + + AL YL + VIH D+KPSN+LLD+ L DFGI+ L +D++ +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKA--KD 182
Query: 553 QTLATIGYMAPEY-----GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ YMAPE + DV+S GI L+E T + P
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSAN 574
H D+KP N+L+ + A+L DFGIA T E + + T+ T+ Y APE E +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL-GNTVGTLYYXAPERFSESHATYR 215
Query: 575 GDVYSFGIMLMETFTRKKP 593
D+Y+ +L E T P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V + G AMK+ + V + D E ++++ R
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKE---VIVAKDEVAHTLTENRVLQNSR 66
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
H + + S + V+EY G L +L + R ++ SAL+YLH
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH 125
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYG 566
V++ DLK N++LD + ++DFG+ K + D +T++ T Y+APE
Sbjct: 126 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKX-FCGTPEYLAPEVL 181
Query: 567 KEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 27/228 (11%)
Query: 373 MPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRV 431
M P F YL+L +G+G+FG V + G AMK+ + V
Sbjct: 3 MDPRVTMNEFEYLKL------------LGKGTFGKVILVKEKATGRYYAMKILKKE---V 47
Query: 432 FKSFD------VECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI 485
+ D E ++++ RH + + S + V+EY G L +L
Sbjct: 48 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 107
Query: 486 LDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545
+ R ++ SAL+YLH V++ DLK N++LD + ++DFG+ K +
Sbjct: 108 SEDRARF-YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK- 163
Query: 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKP 593
D +T++ T Y+APE ++ D + G+++ E + P
Sbjct: 164 DGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 20/216 (9%)
Query: 399 LIGRGSFGSV-FKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI------RHRNII 451
++G+GSFG V R G A+K+ L+ V + DVEC M++ + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
++ S + V+EY+ G L ++ + ++ + + A L F S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+I+ DLK NV+LD ++DFG+ K + +T T Y+APE
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAPEIIAYQPY 519
Query: 572 SANGDVYSFGIMLMETFTRKKP-----TDEIFNGEM 602
+ D ++FG++L E + P DE+F M
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFD------VECEMMKSIR 446
F L+G+G+FG V + G AMK+ + V + D E ++++ R
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKE---VIVAKDEVAHTLTENRVLQNSR 67
Query: 447 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASALEYL 505
H + + S + V+EY G L + H S + R ++ SAL+YL
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 506 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
H V++ DLK N++LD + ++DFG+ K + D +T++ T Y+APE
Sbjct: 126 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKX-FCGTPEYLAPEV 181
Query: 566 GKEGRVSANGDVYSFGIMLMETFTRKKP 593
++ D + G+++ E + P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 20/216 (9%)
Query: 399 LIGRGSFGSV-FKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI------RHRNII 451
++G+GSFG V R G A+K+ L+ V + DVEC M++ + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA 511
++ S + V+EY+ G L ++ + ++ + + A L F S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 512 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571
+I+ DLK NV+LD ++DFG+ K + +T T Y+APE
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAPEIIAYQPY 198
Query: 572 SANGDVYSFGIMLMETFTRKKP-----TDEIFNGEM 602
+ D ++FG++L E + P DE+F M
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 133
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 134 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 187
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 239
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS 444
L + +D + IG G+FG R E+ + + ++ ++ E +S
Sbjct: 12 LPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRS 71
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVA 499
+RH NI++ A+V+EY G L E+ ++ + D +Q+L
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------I 125
Query: 500 SALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHL--SDFGIAKLLTREDQSTIQTQTLAT 557
S + Y H + QV H DLK N LLD + L +DFG +K S + +Q +
Sbjct: 126 SGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK------ASVLHSQPKSA 176
Query: 558 IG---YMAPEY--GKE--GRVSANGDVYSFGIML 584
+G Y+APE KE G+V+ DV+S G+ L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 38/224 (16%)
Query: 399 LIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMM-KSIRHRNIIKVISSC 457
++G GS G+V G VA+K + + + +E +++ +S H N+I+ S
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRYYCSE 78
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASALEYLHFGYSA 511
+ + F + LE + + +L+ + S N + Y ++++ +AS + +LH S
Sbjct: 79 TTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 512 QVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLLTREDQSTIQT---QTL 555
++IH DLKP N+L+ +N+ +SDFG+ K L QS+ +T
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SGQSSFRTNLNNPS 193
Query: 556 ATIGYMAPEYGKEG-------RVSANGDVYSFGIMLMETFTRKK 592
T G+ APE +E R++ + D++S G + ++ K
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 122
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 123 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 176
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQST 549
IM D+ +A+++LH S + H D+KP N+L + + V L+DFG AK T Q+
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNA 166
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
+QT T Y+APE + + D++S G+++
Sbjct: 167 LQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQST 549
IM D+ +A+++LH S + H D+KP N+L + + V L+DFG AK T Q+
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNA 185
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
+QT T Y+APE + + D++S G+++
Sbjct: 186 LQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 432 FKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKY-----LHSSNYIL 486
+ F E +++ I++ + +N + ++ EYM + S+ K+ + NY
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 487 DI-YQRLNIMID-VASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544
I Q + +I V ++ Y+H + H D+KPSN+L+D N LSDFG ++ +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV- 203
Query: 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANG---DVYSFGIMLMETFTRKKPTD------ 595
D+ ++ T +M PE+ S NG D++S GI L F P
Sbjct: 204 -DKKIKGSR--GTYEFMPPEFF-SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259
Query: 596 EIFNGEMT--------LKHWVNDWLPISTKE-IVDPNLLSREDINFVA 634
E+FN T H++ P++ K+ N LS EDI+F+
Sbjct: 260 ELFNNIRTKNIEYPLDRNHFL---YPLTNKKSTCSNNFLSNEDIDFLK 304
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G ++ E
Sbjct: 183 TPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNI 450
D + + +G G+FG V + G A K + ++ E + M +RH +
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 451 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ + + ++ ++ E+M G L + + + + + + M V L ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E 273
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+H DLKP N++ L DFG+ L + + T T + APE +
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEVAEG 330
Query: 569 GRVSANGDVYSFGIM 583
V D++S G++
Sbjct: 331 KPVGYYTDMWSVGVL 345
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 98/189 (51%), Gaps = 30/189 (15%)
Query: 369 NDANMPPEAMQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLGDGME---VAMKVFN 425
+ ++ P +M R S ++ D + +LIG GS+G V +A D +E VA+K
Sbjct: 33 HHSSKPTASMPRPHSDWQI---PDRYEIRHLIGTGSYGHVCEAY--DKLEKRVVAIK--- 84
Query: 426 LQYGRVFKSFDVECE-------MMKSIRHRNIIKVISSC---SNEEFKAL--VLEYMPHG 473
+ RVF+ ++C+ ++ + H +++KV+ E+F L VLE +
Sbjct: 85 -KILRVFEDL-IDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADS 141
Query: 474 SLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHL 533
+K + Y+ +++ + ++ ++ ++Y+H SA ++H DLKP+N L++ + +
Sbjct: 142 DFKKLFRTPVYLTELHIK-TLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKV 197
Query: 534 SDFGIAKLL 542
DFG+A+ +
Sbjct: 198 CDFGLARTV 206
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY------GRVFKSFDVECEMMKS 444
D + +G G F V K R G++ A K + G + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
I+H N+I + N+ L+ E + G L +L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDQSTIQTQTLATIGY 560
LH S Q+ H DLKP N++L D V + DFG+A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 561 MAPEYGKEGRVSANGDVYSFGIM 583
+APE + D++S G++
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 392 DGFSENNLIGRGSFGSVFK-ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNI 450
D + + +G G+FG V + G A K + ++ E + M +RH +
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 451 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS 510
+ + + ++ ++ E+M G L + + + + + + M V L ++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E 167
Query: 511 AQVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE 568
+H DLKP N++ L DFG+ L + + T T + APE +
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEVAEG 224
Query: 569 GRVSANGDVYSFGIM 583
V D++S G++
Sbjct: 225 KPVGYYTDMWSVGVL 239
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 438 ECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMI 496
E ++K + H NI+K+ ++ LV+E G L ++ +H + + I+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF--NEVDAAVIIK 143
Query: 497 DVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDQSTIQTQ 553
V S + YLH ++H DLKP N+LL + + + + DFG++ + E+Q ++ +
Sbjct: 144 QVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMK-E 197
Query: 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
L T Y+APE ++ + DV+S G++L
Sbjct: 198 RLGTAYYIAPEVLRK-KYDEKCDVWSIGVIL 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
+ T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQW 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 129
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 183
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G ++ E
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 400 IGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN 459
IG G+FG R E+ + + + ++ E +S+RH NI++
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 460 EEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVASALEYLHFGYSAQVI 514
A+++EY G L E+ ++ + D +Q+L S + Y H S Q+
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGVSYCH---SMQIC 138
Query: 515 HCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLATIG---YMAPEY---- 565
H DLK N LLD + L DFG +K S + +Q +T+G Y+APE
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 566 GKEGRVSANGDVYSFGIML 584
+G+++ DV+S G+ L
Sbjct: 193 EYDGKIA---DVWSCGVTL 208
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS 444
L + +D + IG G+FG R E+ + + ++ ++ E +S
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRS 71
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVA 499
+RH NI++ A+V+EY G L E+ ++ + D +Q+L
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------I 125
Query: 500 SALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
S + Y H + QV H DLK N LLD + L FG +K S + +Q +T
Sbjct: 126 SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK------SSVLHSQPKST 176
Query: 558 IG---YMAPEY----GKEGRVSANGDVYSFGIML 584
+G Y+APE +G+V+ DV+S G+ L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552
I + + ALE+LH S VIH D+KPSNVL++ DFGI+ L + I
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 553 --QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVND 610
+ + PE ++G S D++S GI +E + P D LK V +
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE 256
Query: 611 WLP 613
P
Sbjct: 257 PSP 259
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHW 607
+ T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 234
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 88/236 (37%), Gaps = 54/236 (22%)
Query: 400 IGRGSFGSVFKARLGDGMEV-AMKVFNLQYGRVFKSFDVE-----CEMMKSIRHRNIIKV 453
IG+GS+G V A + A+K+ N R DVE +MK + H NI ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 454 ISSCSNEEFKALVLEYMPHGSLEKYL---------------------------------- 479
+E++ LV+E G L L
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 480 -HSSNYILDIYQR----LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN--MVAH 532
H LD QR NIM + SAL YLH + + H D+KP N L N
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIK 210
Query: 533 LSDFGIAKLLTREDQSTI--QTQTLATIGYMAPEYGKEGRVS--ANGDVYSFGIML 584
L DFG++K + + T T ++APE S D +S G++L
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 34/208 (16%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQY-GRVF-KSFDVECEMMKSIRHRNIIKVI-- 454
+G G++GSV A G +VA+K + + +F K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 455 ----SSCSNEEFKALVLEYMPHGSLEKYL------HSSNYILDIYQRLNIMIDVASALEY 504
SS N LV+ +M L+K + Y+ +YQ L L+Y
Sbjct: 92 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKFSEEKIQYL--VYQMLK-------GLKY 141
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+H SA V+H DLKP N+ ++++ + DFG+A+ E T + T Y APE
Sbjct: 142 IH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPE 193
Query: 565 YGKEG-RVSANGDVYSFGIMLMETFTRK 591
+ D++S G ++ E T K
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 34/208 (16%)
Query: 400 IGRGSFGSVFKA-RLGDGMEVAMKVFNLQY-GRVF-KSFDVECEMMKSIRHRNIIKVI-- 454
+G G++GSV A G +VA+K + + +F K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 455 ----SSCSNEEFKALVLEYMPHGSLEKYL------HSSNYILDIYQRLNIMIDVASALEY 504
SS N LV+ +M L+K + Y+ +YQ L L+Y
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFSEEKIQYL--VYQMLK-------GLKY 159
Query: 505 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPE 564
+H SA V+H DLKP N+ ++++ + DFG+A+ E T + T Y APE
Sbjct: 160 IH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPE 211
Query: 565 YGKEG-RVSANGDVYSFGIMLMETFTRK 591
+ D++S G ++ E T K
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 32/214 (14%)
Query: 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS 444
L + +D + IG G+FG R E+ + + ++ ++ E +S
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRS 71
Query: 445 IRHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVA 499
+RH NI++ A+V+EY G L E+ ++ + D +Q+L
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------I 125
Query: 500 SALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDQSTIQTQTLAT 557
S + Y H + QV H DLK N LLD + L FG +K S + +Q T
Sbjct: 126 SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK------SSVLHSQPKDT 176
Query: 558 IG---YMAPEY----GKEGRVSANGDVYSFGIML 584
+G Y+APE +G+V+ DV+S G+ L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T +
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL-- 174
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T+ T Y+APE + + D++S G+++
Sbjct: 175 -TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 27/228 (11%)
Query: 399 LIGRGSFGSVFKA-RLGDGMEVAMKVFNLQYGRVFK--------SFDVECEMMKSIRH-- 447
L+G G FGSV+ R+ D + VA+K +++ R+ +E ++K +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 72
Query: 448 RNIIKVISSCSNEEFKALVLEYM-PHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLH 506
+I+++ + L+LE M P L ++ + + R + V A+ + H
Sbjct: 73 SGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH 131
Query: 507 FGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEY 565
+ V+H D+K N+L+D N L DFG LL + T+ T T Y PE+
Sbjct: 132 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 184
Query: 566 GKEGRVSA-NGDVYSFGIMLMETFTRKKP---TDEIFNGEMTLKHWVN 609
+ R + V+S GI+L + P +EI G++ + V+
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 389 RATDGFSENNLIGRGSFGSVFK--ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR 446
R T F E IG G FGSVFK RL DG A+K R K + ++R
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK-------RSKKPLAGSVDEQNALR 55
Query: 447 ----------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL---N 493
H ++++ S+ + ++ + EY GSL + + I+ ++ +
Sbjct: 56 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 115
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLL 525
+++ V L Y+H S ++H D+KPSN+ +
Sbjct: 116 LLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 389 RATDGFSENNLIGRGSFGSVFK--ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR 446
R T F E IG G FGSVFK RL DG A+K R K + ++R
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK-------RSKKPLAGSVDEQNALR 57
Query: 447 ----------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL---N 493
H ++++ S+ + ++ + EY GSL + + I+ ++ +
Sbjct: 58 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 117
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLL 525
+++ V L Y+H S ++H D+KPSN+ +
Sbjct: 118 LLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 389 RATDGFSENNLIGRGSFGSVFK--ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR 446
R T F E IG G FGSVFK RL DG A+K R K + ++R
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK-------RSKKPLAGSVDEQNALR 59
Query: 447 ----------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL---N 493
H ++++ S+ + ++ + EY GSL + + I+ ++ +
Sbjct: 60 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 119
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLL 525
+++ V L Y+H S ++H D+KPSN+ +
Sbjct: 120 LLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 398 NLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMM-KSIRHRNIIKVISS 456
++G GS G+V G VA+K + + + +E +++ +S H N+I+ S
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRYYCS 95
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASALEYLHFGYS 510
+ + F + LE + + +L+ + S N + Y ++++ +AS + +LH S
Sbjct: 96 ETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 151
Query: 511 AQVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLLTREDQSTIQ---TQT 554
++IH DLKP N+L+ +N+ +SDFG+ K L Q +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SGQXXFRXNLNNP 210
Query: 555 LATIGYMAPEYGKEG---RVSANGDVYSFGIMLMETFTRKK 592
T G+ APE +E R++ + D++S G + ++ K
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 389 RATDGFSENNLIGRGSFGSVFK--ARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR 446
R T F E IG G FGSVFK RL DG A+K R K + ++R
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK-------RSKKPLAGSVDEQNALR 57
Query: 447 ----------HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL---N 493
H ++++ S+ + ++ + EY GSL + + I+ ++ +
Sbjct: 58 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 117
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLL 525
+++ V L Y+H S ++H D+KPSN+ +
Sbjct: 118 LLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 128 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 184
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 185 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 126 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 182
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 183 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 121 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 177
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 178 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQST 549
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 182
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 183 TPCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 391 TDGFSENNLIGRGSFGSVF--KARLGDGMEVAMKVFNLQYGRVFKSFDV---ECEMMKSI 445
+D + +G G++G V K +L G E A+K+ + E ++K +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 446 RHRNIIKVISSCSNEEFKALVLEYMPHGSL--EKYLHSSNYILDIYQRLNIMIDVASALE 503
H NI+K+ ++ LV+E G L E L +D IM V S
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA---AVIMKQVLSGTT 135
Query: 504 YLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560
YLH ++H DLKP N+LL+ + + + DFG++ + + L T Y
Sbjct: 136 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYY 189
Query: 561 MAPEYGKEGRVSANGDVYSFGIML 584
+APE ++ + DV+S G++L
Sbjct: 190 IAPEVLRK-KYDEKCDVWSCGVIL 212
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 176
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 177 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 136 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 192
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 193 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 398 NLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMM-KSIRHRNIIKVISS 456
++G GS G+V G VA+K + + + +E +++ +S H N+I+ S
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRYYCS 95
Query: 457 CSNEEFKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASALEYLHFGYS 510
+ + F + LE + + +L+ + S N + Y ++++ +AS + +LH S
Sbjct: 96 ETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 151
Query: 511 AQVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLLTREDQSTIQT---QT 554
++IH DLKP N+L+ +N+ +SDFG+ K L Q +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SGQXXFRXNLNNP 210
Query: 555 LATIGYMAPEYGKEG---RVSANGDVYSFGIMLMETFTRKK 592
T G+ APE +E R++ + D++S G + ++ K
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 438 ECEMMKSIRHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 491
E +MK + H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 130
Query: 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 131 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 184
Query: 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586
+ T Y APE N D++S G ++ E
Sbjct: 185 VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 493 NIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQST 549
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 178 TPCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 178
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 179 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 166 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 223 ---PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 494 IMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDQSTI 550
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 172 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 228
Query: 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 584
T Y+APE + + D++S G+++
Sbjct: 229 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 400 IGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV----- 453
+G G G VF A D VA+K L + K E ++++ + H NI+KV
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 454 ---------ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEY 504
+ S + +V EYM L L +L+ + RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGP-LLEEHARL-FMYQLLRGLKY 135
Query: 505 LHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLL 542
+H SA V+H DLKP+N+ ++ +++V + DFG+A+++
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 399 LIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMM-KSIRHRNIIKVISSC 457
++G GS G+V G VA+K + + + +E +++ +S H N+I+ S
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRYYCSE 78
Query: 458 SNEEFKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASALEYLHFGYSA 511
+ + F + LE + + +L+ + S N + Y ++++ +AS + +LH S
Sbjct: 79 TTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 512 QVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLLTREDQSTIQ---TQTL 555
++IH DLKP N+L+ +N+ +SDFG+ K L Q +
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SGQXXFRXNLNNPS 193
Query: 556 ATIGYMAPEYGKEG-------RVSANGDVYSFGIMLMETFTRKK 592
T G+ APE +E R++ + D++S G + ++ K
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,726,173
Number of Sequences: 62578
Number of extensions: 749010
Number of successful extensions: 4598
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 1681
Number of HSP's gapped (non-prelim): 1410
length of query: 678
length of database: 14,973,337
effective HSP length: 105
effective length of query: 573
effective length of database: 8,402,647
effective search space: 4814716731
effective search space used: 4814716731
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)