Query 005760
Match_columns 678
No_of_seqs 441 out of 5059
Neff 9.7
Searched_HMMs 46136
Date Thu Mar 28 13:22:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005760.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005760hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4.9E-75 1.1E-79 690.0 49.1 635 1-673 288-954 (968)
2 KOG1187 Serine/threonine prote 100.0 4.9E-49 1.1E-53 406.4 25.7 288 378-671 61-353 (361)
3 KOG0197 Tyrosine kinases [Sign 100.0 4.2E-48 9.2E-53 393.1 14.6 256 393-673 207-464 (468)
4 KOG0581 Mitogen-activated prot 100.0 9E-47 1.9E-51 366.0 18.2 252 393-665 80-334 (364)
5 KOG0192 Tyrosine kinase specif 100.0 5.8E-46 1.3E-50 380.3 23.6 258 394-675 43-308 (362)
6 KOG0615 Serine/threonine prote 100.0 4.5E-46 9.8E-51 363.0 15.1 253 390-665 170-436 (475)
7 KOG1026 Nerve growth factor re 100.0 4.2E-46 9E-51 396.7 14.4 260 391-673 485-765 (774)
8 KOG0575 Polo-like serine/threo 100.0 2.2E-45 4.8E-50 376.7 19.2 247 392-665 18-268 (592)
9 KOG0595 Serine/threonine-prote 100.0 2.8E-45 6.2E-50 358.3 18.5 203 390-599 8-219 (429)
10 KOG0591 NIMA (never in mitosis 100.0 1.7E-45 3.7E-50 341.4 9.4 256 392-668 19-283 (375)
11 KOG0593 Predicted protein kina 100.0 1.4E-44 3.1E-49 338.6 14.4 267 392-665 2-283 (396)
12 KOG0193 Serine/threonine prote 100.0 3.5E-44 7.6E-49 365.7 14.1 267 385-673 385-656 (678)
13 KOG0598 Ribosomal protein S6 k 100.0 4.5E-44 9.8E-49 347.2 13.5 243 390-658 23-269 (357)
14 KOG0659 Cdk activating kinase 100.0 5.2E-43 1.1E-47 322.9 17.5 264 392-666 2-281 (318)
15 KOG0592 3-phosphoinositide-dep 100.0 2E-43 4.4E-48 355.9 15.8 253 388-665 69-337 (604)
16 KOG0600 Cdc2-related protein k 100.0 5.6E-43 1.2E-47 349.9 17.5 268 391-665 116-399 (560)
17 KOG0661 MAPK related serine/th 100.0 1.1E-43 2.3E-48 352.4 9.9 267 389-666 7-291 (538)
18 KOG0578 p21-activated serine/t 100.0 7.4E-43 1.6E-47 355.3 16.0 251 390-665 271-522 (550)
19 KOG0198 MEKK and related serin 100.0 2.5E-42 5.4E-47 342.2 17.9 257 391-668 16-278 (313)
20 KOG0582 Ste20-like serine/thre 100.0 2.2E-41 4.7E-46 333.5 20.3 262 390-665 24-292 (516)
21 KOG0196 Tyrosine kinase, EPH ( 100.0 3.1E-43 6.7E-48 366.8 7.5 255 394-671 631-892 (996)
22 KOG1095 Protein tyrosine kinas 100.0 2.4E-42 5.2E-47 381.5 14.4 263 391-676 691-967 (1025)
23 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.5E-41 7.6E-46 352.8 19.3 261 390-672 5-336 (338)
24 KOG0616 cAMP-dependent protein 100.0 1.4E-41 3.1E-46 318.1 14.3 238 391-658 43-284 (355)
25 KOG0605 NDR and related serine 100.0 3.6E-41 7.9E-46 340.1 16.2 251 390-664 139-443 (550)
26 KOG0583 Serine/threonine prote 100.0 8.9E-41 1.9E-45 345.7 19.5 249 389-664 14-273 (370)
27 KOG0194 Protein tyrosine kinas 100.0 1.6E-41 3.5E-46 351.2 13.3 259 390-673 155-423 (474)
28 KOG4721 Serine/threonine prote 100.0 1.4E-41 3E-46 342.2 10.4 245 397-675 129-373 (904)
29 KOG0663 Protein kinase PITSLRE 100.0 1E-40 2.3E-45 316.9 15.2 270 388-665 72-360 (419)
30 KOG0588 Serine/threonine prote 100.0 6.9E-41 1.5E-45 344.4 14.3 247 392-666 12-263 (786)
31 KOG0597 Serine-threonine prote 100.0 1.1E-40 2.5E-45 335.9 15.4 246 392-665 2-250 (808)
32 KOG0201 Serine/threonine prote 100.0 4E-41 8.7E-46 331.7 11.1 249 391-665 12-262 (467)
33 KOG2345 Serine/threonine prote 100.0 9.7E-41 2.1E-45 304.9 11.8 263 388-670 17-300 (302)
34 PHA02988 hypothetical protein; 100.0 1.5E-39 3.3E-44 330.8 19.6 247 397-672 25-281 (283)
35 cd05096 PTKc_DDR1 Catalytic do 100.0 3.3E-39 7.2E-44 332.6 21.4 262 391-668 4-303 (304)
36 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-39 3.4E-44 343.9 19.4 259 390-670 33-374 (375)
37 KOG0694 Serine/threonine prote 100.0 7.3E-40 1.6E-44 339.8 15.4 243 390-660 366-613 (694)
38 cd05106 PTKc_CSF-1R Catalytic 100.0 2.1E-39 4.6E-44 342.5 18.8 260 390-671 36-373 (374)
39 KOG0580 Serine/threonine prote 100.0 5.1E-40 1.1E-44 298.9 11.4 248 391-666 21-273 (281)
40 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.9E-39 8.4E-44 325.4 18.1 256 391-670 4-265 (266)
41 KOG1094 Discoidin domain recep 100.0 1.5E-39 3.2E-44 329.0 14.8 265 390-670 536-804 (807)
42 KOG1024 Receptor-like protein 100.0 9.2E-40 2E-44 315.9 12.7 271 385-678 277-563 (563)
43 cd07848 STKc_CDKL5 Catalytic d 100.0 1.4E-38 2.9E-43 325.4 22.0 269 392-665 1-283 (287)
44 KOG0660 Mitogen-activated prot 100.0 2.5E-39 5.3E-44 312.9 14.3 269 390-665 20-309 (359)
45 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-38 3.5E-43 308.8 19.3 268 392-666 11-302 (323)
46 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.1E-38 4.5E-43 323.8 21.2 265 392-665 5-284 (288)
47 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.3E-38 5E-43 326.1 21.4 269 391-665 4-287 (303)
48 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.8E-38 3.9E-43 336.5 21.1 260 390-671 35-398 (400)
49 cd05631 STKc_GRK4 Catalytic do 100.0 1.8E-38 3.8E-43 323.8 20.3 250 393-665 1-260 (285)
50 KOG0610 Putative serine/threon 100.0 9.4E-39 2E-43 312.5 17.3 252 392-665 77-391 (459)
51 cd05048 PTKc_Ror Catalytic Dom 100.0 1.3E-38 2.8E-43 324.8 18.8 256 392-670 5-283 (283)
52 PF07714 Pkinase_Tyr: Protein 100.0 1.8E-39 3.9E-44 326.1 12.1 249 396-667 3-259 (259)
53 cd06649 PKc_MEK2 Catalytic dom 100.0 7.7E-38 1.7E-42 326.0 24.6 266 391-666 4-301 (331)
54 cd05093 PTKc_TrkB Catalytic do 100.0 1.8E-38 3.9E-43 324.4 19.5 260 391-673 4-282 (288)
55 KOG4257 Focal adhesion tyrosin 100.0 5.6E-39 1.2E-43 326.6 15.4 255 393-672 390-651 (974)
56 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-38 3.2E-43 319.3 18.4 252 392-668 4-256 (256)
57 KOG0589 Serine/threonine prote 100.0 2.2E-39 4.8E-44 328.8 12.3 251 391-666 3-258 (426)
58 KOG4278 Protein tyrosine kinas 100.0 1.8E-39 4E-44 329.5 11.7 256 391-671 266-524 (1157)
59 cd05108 PTKc_EGFR Catalytic do 100.0 1.3E-38 2.9E-43 329.8 18.4 259 391-673 6-271 (316)
60 cd05612 STKc_PRKX_like Catalyt 100.0 7.2E-39 1.6E-43 327.7 15.8 245 392-666 1-254 (291)
61 KOG0585 Ca2+/calmodulin-depend 100.0 6.8E-39 1.5E-43 317.8 14.8 258 387-667 92-373 (576)
62 cd05033 PTKc_EphR Catalytic do 100.0 3.1E-38 6.7E-43 318.9 20.0 257 391-670 3-265 (266)
63 cd05148 PTKc_Srm_Brk Catalytic 100.0 9.7E-39 2.1E-43 321.6 16.3 257 389-670 3-261 (261)
64 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-40 3.7E-45 302.0 3.0 251 391-665 10-266 (355)
65 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2E-38 4.3E-43 331.0 19.1 253 392-666 1-257 (333)
66 KOG0658 Glycogen synthase kina 100.0 1.6E-39 3.4E-44 314.9 9.8 260 393-665 25-305 (364)
67 cd05571 STKc_PKB Catalytic dom 100.0 1.4E-38 3E-43 330.4 16.8 241 398-665 1-250 (323)
68 cd05054 PTKc_VEGFR Catalytic d 100.0 3.3E-38 7.2E-43 328.9 19.6 261 390-672 5-335 (337)
69 KOG0611 Predicted serine/threo 100.0 7.4E-39 1.6E-43 310.5 13.4 248 391-667 52-304 (668)
70 cd05068 PTKc_Frk_like Catalyti 100.0 4E-38 8.6E-43 317.2 19.1 256 390-670 4-261 (261)
71 cd05049 PTKc_Trk Catalytic dom 100.0 2.8E-38 6.1E-43 321.8 18.2 255 391-668 4-279 (280)
72 PTZ00263 protein kinase A cata 100.0 1.1E-38 2.4E-43 331.9 15.5 245 391-665 17-270 (329)
73 cd05084 PTKc_Fes Catalytic dom 100.0 5.1E-38 1.1E-42 314.6 19.1 248 398-668 1-251 (252)
74 cd05072 PTKc_Lyn Catalytic dom 100.0 2.9E-38 6.3E-43 318.2 17.5 255 391-670 5-261 (261)
75 cd05094 PTKc_TrkC Catalytic do 100.0 5.1E-38 1.1E-42 321.6 19.3 259 392-673 5-285 (291)
76 KOG2052 Activin A type IB rece 100.0 6.9E-38 1.5E-42 308.6 18.7 271 387-672 206-505 (513)
77 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.4E-38 9.6E-43 315.7 17.5 252 392-668 4-256 (256)
78 cd05111 PTK_HER3 Pseudokinase 100.0 9.4E-38 2E-42 317.5 20.1 258 392-673 7-271 (279)
79 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-37 4.1E-42 323.0 22.8 198 391-596 4-204 (333)
80 PTZ00267 NIMA-related protein 100.0 4.8E-38 1E-42 342.5 18.8 250 393-665 68-322 (478)
81 cd08228 STKc_Nek6 Catalytic do 100.0 1.8E-37 3.9E-42 313.5 21.6 258 392-671 2-266 (267)
82 cd05595 STKc_PKB_beta Catalyti 100.0 6.6E-38 1.4E-42 325.2 18.5 241 398-665 1-250 (323)
83 cd05059 PTKc_Tec_like Catalyti 100.0 9.5E-38 2.1E-42 313.4 18.9 251 392-667 4-255 (256)
84 cd05090 PTKc_Ror1 Catalytic do 100.0 8E-38 1.7E-42 318.9 18.6 255 392-669 5-282 (283)
85 KOG1989 ARK protein kinase fam 100.0 3.4E-38 7.3E-43 338.3 16.2 260 389-672 34-313 (738)
86 cd05052 PTKc_Abl Catalytic dom 100.0 1.1E-37 2.4E-42 314.3 19.2 254 392-670 6-262 (263)
87 cd05092 PTKc_TrkA Catalytic do 100.0 7E-38 1.5E-42 318.7 17.8 256 391-669 4-280 (280)
88 PTZ00426 cAMP-dependent protei 100.0 2.8E-38 6.1E-43 329.5 15.0 246 391-666 29-284 (340)
89 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.1E-37 6.7E-42 314.6 22.3 269 392-671 3-282 (283)
90 cd05062 PTKc_IGF-1R Catalytic 100.0 7.2E-38 1.6E-42 318.2 17.4 256 390-668 4-276 (277)
91 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.7E-38 1.9E-42 327.3 18.4 266 393-665 1-289 (338)
92 cd05585 STKc_YPK1_like Catalyt 100.0 4.7E-38 1E-42 324.9 15.9 239 400-665 1-246 (312)
93 cd05593 STKc_PKB_gamma Catalyt 100.0 8.8E-38 1.9E-42 324.9 17.9 242 398-666 1-251 (328)
94 KOG3653 Transforming growth fa 100.0 1E-37 2.3E-42 309.6 17.0 275 391-671 209-504 (534)
95 PHA03212 serine/threonine kina 100.0 2.8E-37 6.1E-42 327.3 21.6 263 391-665 91-375 (391)
96 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.2E-37 9.1E-42 313.8 21.9 267 392-670 4-283 (284)
97 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-37 2.4E-42 331.1 17.9 252 393-665 2-304 (381)
98 cd05055 PTKc_PDGFR Catalytic d 100.0 2.3E-37 5.1E-42 318.2 19.4 259 390-670 33-301 (302)
99 cd05043 PTK_Ryk Pseudokinase d 100.0 1.7E-37 3.7E-42 316.0 18.2 261 390-673 4-279 (280)
100 cd05089 PTKc_Tie1 Catalytic do 100.0 2.6E-37 5.5E-42 317.4 19.6 258 392-675 2-280 (297)
101 cd05599 STKc_NDR_like Catalyti 100.0 6.7E-38 1.4E-42 331.4 15.7 252 392-665 1-295 (364)
102 cd05035 PTKc_Axl_like Catalyti 100.0 3.5E-37 7.6E-42 312.4 20.2 254 394-670 1-272 (273)
103 cd05045 PTKc_RET Catalytic dom 100.0 2.6E-37 5.7E-42 316.3 19.3 257 393-672 1-288 (290)
104 KOG4279 Serine/threonine prote 100.0 3.7E-38 7.9E-43 323.9 12.7 244 399-665 582-831 (1226)
105 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-37 2.6E-42 319.4 16.6 260 389-671 9-292 (293)
106 cd08229 STKc_Nek7 Catalytic do 100.0 3.3E-37 7.1E-42 311.6 19.6 258 392-671 2-266 (267)
107 cd05091 PTKc_Ror2 Catalytic do 100.0 1E-37 2.2E-42 318.2 16.0 254 393-669 6-282 (283)
108 cd05071 PTKc_Src Catalytic dom 100.0 4.2E-37 9.2E-42 309.7 20.3 254 391-670 5-260 (262)
109 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.9E-37 6.2E-42 327.1 19.9 261 389-671 34-400 (401)
110 cd05601 STKc_CRIK Catalytic do 100.0 4.8E-38 1E-42 327.8 13.7 252 392-665 1-262 (330)
111 cd05109 PTKc_HER2 Catalytic do 100.0 2.2E-37 4.9E-42 314.9 18.3 260 391-674 6-272 (279)
112 cd06646 STKc_MAP4K5 Catalytic 100.0 4.7E-37 1E-41 310.5 20.5 255 391-667 8-266 (267)
113 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-37 4.5E-42 327.0 18.6 202 392-597 1-239 (363)
114 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 9.5E-37 2.1E-41 308.2 22.6 258 392-671 2-266 (267)
115 KOG0574 STE20-like serine/thre 100.0 1.6E-39 3.4E-44 303.8 2.0 248 394-666 35-283 (502)
116 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.6E-37 5.6E-42 318.9 18.7 261 391-674 17-303 (307)
117 cd05573 STKc_ROCK_NDR_like Cat 100.0 6E-38 1.3E-42 330.1 14.2 253 392-666 1-285 (350)
118 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.2E-37 4.9E-42 314.5 17.8 256 390-668 4-276 (277)
119 cd07862 STKc_CDK6 Catalytic do 100.0 3.9E-37 8.4E-42 315.1 19.7 266 392-665 1-286 (290)
120 PTZ00283 serine/threonine prot 100.0 1.2E-37 2.7E-42 339.2 16.9 256 388-666 28-297 (496)
121 cd05584 STKc_p70S6K Catalytic 100.0 2.1E-37 4.5E-42 321.6 17.7 241 398-665 2-255 (323)
122 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.2E-37 7E-42 317.8 19.0 261 390-673 13-299 (304)
123 PLN00034 mitogen-activated pro 100.0 2.6E-37 5.7E-42 325.0 18.4 248 392-666 74-328 (353)
124 cd05589 STKc_PKN Catalytic dom 100.0 1.8E-37 3.8E-42 322.4 16.8 244 394-665 1-256 (324)
125 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.8E-37 1E-41 321.5 20.1 261 390-672 5-341 (343)
126 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.4E-37 9.6E-42 309.4 19.1 253 391-669 5-259 (260)
127 KOG1025 Epidermal growth facto 100.0 2.7E-38 5.9E-43 330.9 10.5 257 394-674 698-961 (1177)
128 cd05075 PTKc_Axl Catalytic dom 100.0 5.3E-37 1.1E-41 311.0 19.6 254 394-670 1-271 (272)
129 cd05614 STKc_MSK2_N N-terminal 100.0 2.7E-37 5.9E-42 322.4 17.9 251 393-665 1-266 (332)
130 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-37 3.6E-42 329.6 16.1 253 392-666 1-305 (377)
131 KOG0199 ACK and related non-re 100.0 3.7E-38 8.1E-43 324.6 10.7 253 395-671 113-373 (1039)
132 cd05097 PTKc_DDR_like Catalyti 100.0 1E-36 2.2E-41 312.7 21.3 261 391-668 4-294 (295)
133 cd05590 STKc_nPKC_eta Catalyti 100.0 2.6E-37 5.6E-42 320.3 16.9 236 398-660 1-241 (320)
134 cd05065 PTKc_EphR_B Catalytic 100.0 4.5E-37 9.7E-42 311.0 18.2 256 392-670 4-268 (269)
135 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.9E-37 1.5E-41 316.1 19.9 265 392-665 6-285 (309)
136 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-37 4.2E-42 329.7 16.2 251 393-665 2-304 (382)
137 cd05116 PTKc_Syk Catalytic dom 100.0 7.3E-37 1.6E-41 307.2 19.4 247 399-670 2-255 (257)
138 cd06654 STKc_PAK1 Catalytic do 100.0 6.4E-37 1.4E-41 314.1 19.4 253 388-665 16-269 (296)
139 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.3E-37 1.4E-41 308.2 19.0 254 390-669 4-259 (260)
140 cd05041 PTKc_Fes_like Catalyti 100.0 9.7E-37 2.1E-41 305.2 20.1 248 398-668 1-250 (251)
141 cd05115 PTKc_Zap-70 Catalytic 100.0 8.6E-37 1.9E-41 306.5 19.8 248 399-670 2-255 (257)
142 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-37 4.3E-42 322.2 15.7 241 398-665 1-251 (325)
143 cd06612 STKc_MST1_2 Catalytic 100.0 1.1E-36 2.4E-41 305.7 20.6 250 391-665 2-252 (256)
144 cd05066 PTKc_EphR_A Catalytic 100.0 6.8E-37 1.5E-41 309.2 19.0 256 392-670 4-266 (267)
145 PRK13184 pknD serine/threonine 100.0 9E-37 2E-41 340.3 21.7 260 392-672 2-292 (932)
146 KOG4717 Serine/threonine prote 100.0 4E-37 8.7E-42 306.7 16.8 249 390-665 16-269 (864)
147 cd05591 STKc_nPKC_epsilon Cata 100.0 2.9E-37 6.3E-42 320.4 16.6 241 398-665 1-253 (321)
148 KOG0032 Ca2+/calmodulin-depend 100.0 1E-36 2.2E-41 314.9 20.5 252 390-666 33-293 (382)
149 cd05056 PTKc_FAK Catalytic dom 100.0 7.8E-37 1.7E-41 309.4 19.2 258 391-673 5-268 (270)
150 cd05598 STKc_LATS Catalytic do 100.0 1.4E-37 2.9E-42 330.3 14.3 253 392-666 1-301 (376)
151 cd05061 PTKc_InsR Catalytic do 100.0 5.1E-37 1.1E-41 313.7 18.0 259 390-671 4-279 (288)
152 cd05596 STKc_ROCK Catalytic do 100.0 2.8E-37 6E-42 326.1 16.6 254 390-666 41-304 (370)
153 cd05085 PTKc_Fer Catalytic dom 100.0 8.6E-37 1.9E-41 305.4 19.2 247 398-668 1-249 (250)
154 cd05034 PTKc_Src_like Catalyti 100.0 6.2E-37 1.4E-41 308.5 18.3 255 390-669 4-260 (261)
155 cd05063 PTKc_EphR_A2 Catalytic 100.0 8.1E-37 1.8E-41 308.9 19.2 257 391-670 4-267 (268)
156 cd05587 STKc_cPKC Catalytic do 100.0 4.2E-37 9E-42 319.6 17.4 241 393-660 1-246 (324)
157 cd05592 STKc_nPKC_theta_delta 100.0 4.2E-37 9.2E-42 318.1 17.3 240 398-664 1-246 (316)
158 cd00192 PTKc Catalytic domain 100.0 1E-36 2.2E-41 306.9 19.5 248 398-668 1-262 (262)
159 cd06625 STKc_MEKK3_like Cataly 100.0 1.6E-36 3.6E-41 305.8 21.1 252 392-666 2-260 (263)
160 cd05088 PTKc_Tie2 Catalytic do 100.0 6.1E-37 1.3E-41 315.3 18.2 257 391-673 6-283 (303)
161 cd05099 PTKc_FGFR4 Catalytic d 100.0 8.6E-37 1.9E-41 316.0 19.4 261 391-674 11-297 (314)
162 cd05607 STKc_GRK7 Catalytic do 100.0 2.4E-36 5.1E-41 306.8 22.3 245 400-666 1-250 (277)
163 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-36 2.8E-41 309.3 20.2 244 400-665 1-256 (280)
164 cd05032 PTKc_InsR_like Catalyt 100.0 4.9E-37 1.1E-41 312.1 17.1 255 391-668 5-276 (277)
165 cd05095 PTKc_DDR2 Catalytic do 100.0 1.7E-36 3.6E-41 311.2 21.2 262 391-668 4-295 (296)
166 cd05618 STKc_aPKC_iota Catalyt 100.0 5.5E-37 1.2E-41 319.0 17.6 241 398-660 1-250 (329)
167 KOG0599 Phosphorylase kinase g 100.0 8.1E-38 1.8E-42 288.8 9.9 251 391-665 16-282 (411)
168 cd06645 STKc_MAP4K3 Catalytic 100.0 1.4E-36 3E-41 307.1 19.9 253 391-665 8-264 (267)
169 cd05057 PTKc_EGFR_like Catalyt 100.0 9.5E-37 2.1E-41 310.3 18.8 262 391-676 6-274 (279)
170 cd08529 STKc_FA2-like Catalyti 100.0 1.4E-36 3.1E-41 304.8 19.8 249 393-666 1-253 (256)
171 cd05605 STKc_GRK4_like Catalyt 100.0 1E-36 2.2E-41 310.8 19.0 251 393-666 1-261 (285)
172 cd06613 STKc_MAP4K3_like Catal 100.0 3.1E-36 6.7E-41 303.5 22.1 254 391-665 2-259 (262)
173 cd05039 PTKc_Csk_like Catalyti 100.0 1.5E-36 3.3E-41 304.7 19.7 250 391-670 5-256 (256)
174 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-36 3E-41 305.8 19.4 252 392-669 6-259 (260)
175 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3E-36 6.5E-41 307.4 22.1 260 393-670 5-283 (284)
176 cd05050 PTKc_Musk Catalytic do 100.0 7.6E-37 1.7E-41 312.5 17.7 257 390-669 3-288 (288)
177 cd06656 STKc_PAK3 Catalytic do 100.0 1.5E-36 3.3E-41 311.5 20.0 254 387-665 14-268 (297)
178 cd06615 PKc_MEK Catalytic doma 100.0 4.1E-36 9E-41 309.9 23.3 265 392-666 1-287 (308)
179 cd05051 PTKc_DDR Catalytic dom 100.0 3.3E-36 7.1E-41 309.2 22.3 262 391-668 4-295 (296)
180 cd05619 STKc_nPKC_theta Cataly 100.0 8.4E-37 1.8E-41 315.7 18.1 240 398-664 1-246 (316)
181 cd05588 STKc_aPKC Catalytic do 100.0 6.6E-37 1.4E-41 318.6 17.3 247 398-665 1-261 (329)
182 cd06643 STKc_SLK Catalytic dom 100.0 1.4E-36 3.1E-41 309.5 19.5 249 394-665 7-261 (282)
183 cd05570 STKc_PKC Catalytic dom 100.0 6.4E-37 1.4E-41 317.2 17.1 241 398-665 1-251 (318)
184 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.2E-36 7E-41 304.7 21.7 252 398-668 1-268 (269)
185 cd05621 STKc_ROCK2 Catalytic d 100.0 4.9E-37 1.1E-41 323.8 16.3 255 389-666 40-304 (370)
186 PTZ00036 glycogen synthase kin 100.0 1.2E-36 2.7E-41 327.5 19.7 263 390-665 64-350 (440)
187 cd06611 STKc_SLK_like Catalyti 100.0 8.4E-37 1.8E-41 310.9 17.3 253 391-666 4-262 (280)
188 cd06644 STKc_STK10_LOK Catalyt 100.0 2E-36 4.4E-41 310.0 20.3 252 391-665 11-268 (292)
189 cd05616 STKc_cPKC_beta Catalyt 100.0 6.4E-37 1.4E-41 318.1 16.7 241 393-660 1-246 (323)
190 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.5E-36 3.4E-41 309.6 19.0 270 392-670 4-283 (284)
191 cd05620 STKc_nPKC_delta Cataly 100.0 1.8E-36 4E-41 313.4 19.7 240 398-664 1-246 (316)
192 PHA03211 serine/threonine kina 100.0 2.6E-36 5.6E-41 323.5 21.4 266 391-666 168-455 (461)
193 cd05040 PTKc_Ack_like Catalyti 100.0 1.6E-36 3.5E-41 304.7 18.5 248 398-668 1-256 (257)
194 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-36 2.6E-41 322.4 18.3 266 393-666 1-288 (372)
195 cd06655 STKc_PAK2 Catalytic do 100.0 2.4E-36 5.3E-41 309.7 19.9 255 386-665 13-268 (296)
196 cd05112 PTKc_Itk Catalytic dom 100.0 1.7E-36 3.8E-41 304.3 18.2 251 392-667 4-255 (256)
197 cd08219 STKc_Nek3 Catalytic do 100.0 1.6E-36 3.4E-41 304.4 17.9 249 393-666 1-252 (255)
198 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.6E-36 5.7E-41 303.8 19.4 239 398-667 1-261 (262)
199 cd07876 STKc_JNK2 Catalytic do 100.0 2.5E-36 5.5E-41 318.4 20.1 263 390-666 19-315 (359)
200 cd05058 PTKc_Met_Ron Catalytic 100.0 2.9E-36 6.4E-41 303.7 19.6 252 398-672 1-261 (262)
201 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.7E-36 5.9E-41 310.4 19.4 266 392-665 6-285 (301)
202 cd05622 STKc_ROCK1 Catalytic d 100.0 9.1E-37 2E-41 322.1 16.2 258 386-666 37-304 (371)
203 cd05110 PTKc_HER4 Catalytic do 100.0 2E-36 4.4E-41 311.5 18.4 259 391-673 6-271 (303)
204 PHA03207 serine/threonine kina 100.0 1.6E-36 3.5E-41 323.1 18.1 263 391-666 91-375 (392)
205 cd05060 PTKc_Syk_like Catalyti 100.0 3.3E-36 7.1E-41 302.5 19.4 249 398-671 1-256 (257)
206 cd05582 STKc_RSK_N N-terminal 100.0 4.4E-37 9.6E-42 318.7 13.3 238 398-662 2-245 (318)
207 cd06624 STKc_ASK Catalytic dom 100.0 7.7E-36 1.7E-40 301.8 21.9 254 389-665 5-264 (268)
208 cd05082 PTKc_Csk Catalytic dom 100.0 2.3E-36 5E-41 303.4 17.9 249 391-670 5-256 (256)
209 cd05627 STKc_NDR2 Catalytic do 100.0 7.9E-37 1.7E-41 322.3 15.0 252 392-665 1-292 (360)
210 cd05073 PTKc_Hck Catalytic dom 100.0 2.8E-36 6.1E-41 303.5 18.3 254 390-669 4-259 (260)
211 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-35 2.3E-40 302.2 22.5 248 392-666 4-253 (277)
212 cd05047 PTKc_Tie Catalytic dom 100.0 4.3E-36 9.4E-41 303.9 19.6 248 398-671 1-269 (270)
213 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-36 2.6E-41 316.0 15.8 237 398-661 1-242 (323)
214 cd05602 STKc_SGK1 Catalytic do 100.0 9.4E-37 2E-41 317.1 14.7 241 398-665 1-246 (325)
215 cd07868 STKc_CDK8 Catalytic do 100.0 5.2E-36 1.1E-40 310.9 20.2 195 397-597 6-219 (317)
216 cd07874 STKc_JNK3 Catalytic do 100.0 2.7E-36 5.8E-41 317.9 18.2 266 390-666 15-311 (355)
217 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 7.3E-36 1.6E-40 302.6 20.6 239 399-668 2-274 (274)
218 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.7E-36 7.9E-41 314.1 19.0 260 391-673 11-296 (334)
219 KOG0596 Dual specificity; seri 100.0 1.3E-36 2.8E-41 306.7 14.6 254 390-665 359-626 (677)
220 cd06637 STKc_TNIK Catalytic do 100.0 2.5E-36 5.5E-41 306.0 17.1 252 389-665 3-268 (272)
221 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-35 2.8E-40 299.6 22.1 251 393-665 1-261 (265)
222 cd05597 STKc_DMPK_like Catalyt 100.0 5.6E-36 1.2E-40 311.8 19.9 255 392-666 1-266 (331)
223 cd05630 STKc_GRK6 Catalytic do 100.0 7.8E-36 1.7E-40 304.3 20.3 250 393-665 1-260 (285)
224 cd06628 STKc_MAPKKK_Byr2_like 100.0 7E-36 1.5E-40 301.9 19.8 249 393-665 1-263 (267)
225 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-35 2.4E-40 302.4 21.3 249 392-666 1-253 (279)
226 cd05044 PTKc_c-ros Catalytic d 100.0 3.7E-36 8.1E-41 304.3 17.6 249 398-669 1-269 (269)
227 cd07863 STKc_CDK4 Catalytic do 100.0 8.2E-36 1.8E-40 305.0 20.2 265 393-665 1-284 (288)
228 cd06609 STKc_MST3_like Catalyt 100.0 7.3E-36 1.6E-40 303.0 19.6 248 392-665 1-250 (274)
229 cd05604 STKc_SGK3 Catalytic do 100.0 1.2E-36 2.5E-41 316.4 14.0 240 398-664 1-245 (325)
230 cd05615 STKc_cPKC_alpha Cataly 100.0 3.2E-36 7E-41 312.5 17.3 241 393-660 1-246 (323)
231 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.7E-36 1.7E-40 310.3 20.0 243 398-661 1-249 (327)
232 cd05042 PTKc_Aatyk Catalytic d 100.0 1.2E-35 2.6E-40 300.6 20.9 252 398-668 1-268 (269)
233 cd07861 STKc_CDK1_euk Catalyti 100.0 6.5E-36 1.4E-40 305.2 19.1 266 393-665 1-281 (285)
234 cd05632 STKc_GRK5 Catalytic do 100.0 7.9E-36 1.7E-40 304.3 19.6 250 393-665 1-260 (285)
235 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-35 3E-40 298.2 21.1 238 398-668 1-259 (259)
236 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-35 2.4E-40 300.1 20.3 253 392-665 1-256 (265)
237 PHA03209 serine/threonine kina 100.0 9E-36 2E-40 313.4 20.4 263 390-665 64-350 (357)
238 cd08221 STKc_Nek9 Catalytic do 100.0 1.2E-35 2.5E-40 298.3 19.9 249 393-666 1-253 (256)
239 smart00219 TyrKc Tyrosine kina 100.0 1.1E-35 2.4E-40 298.7 19.6 250 394-667 1-258 (258)
240 cd08227 PK_STRAD_alpha Pseudok 100.0 1.3E-35 2.8E-40 308.9 20.6 266 396-665 2-306 (327)
241 cd05046 PTK_CCK4 Pseudokinase 100.0 7.2E-36 1.6E-40 303.2 18.2 254 392-668 5-274 (275)
242 cd07875 STKc_JNK1 Catalytic do 100.0 8.9E-36 1.9E-40 314.9 19.6 264 390-665 22-317 (364)
243 cd07839 STKc_CDK5 Catalytic do 100.0 6.2E-36 1.4E-40 305.2 17.6 267 393-665 1-280 (284)
244 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.9E-35 4E-40 302.8 20.9 269 390-665 3-287 (291)
245 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.3E-35 7.2E-40 300.2 22.6 267 392-665 1-282 (286)
246 KOG0579 Ste20-like serine/thre 100.0 3E-37 6.5E-42 314.1 7.4 250 393-665 33-288 (1187)
247 cd05624 STKc_MRCK_beta Catalyt 100.0 8.4E-36 1.8E-40 310.6 18.3 255 392-666 1-266 (331)
248 PF00069 Pkinase: Protein kina 100.0 2.7E-36 5.8E-41 303.6 14.1 252 394-665 1-256 (260)
249 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-35 2.7E-40 309.5 19.6 255 392-666 1-266 (332)
250 cd05603 STKc_SGK2 Catalytic do 100.0 3E-36 6.5E-41 312.9 14.8 237 398-661 1-242 (321)
251 KOG0577 Serine/threonine prote 100.0 4.3E-37 9.3E-42 311.1 7.9 245 393-666 27-278 (948)
252 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.3E-36 1.8E-40 303.0 17.3 246 393-665 5-252 (277)
253 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-35 2.8E-40 311.2 19.1 264 389-665 12-297 (343)
254 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.2E-36 7E-41 302.6 13.9 240 398-668 1-258 (258)
255 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.2E-35 4.7E-40 301.1 20.1 255 392-667 5-267 (284)
256 cd06638 STKc_myosinIIIA Cataly 100.0 1.2E-35 2.6E-40 303.5 18.0 259 384-666 10-283 (286)
257 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4E-35 8.7E-40 296.3 21.7 256 392-665 1-263 (267)
258 cd08223 STKc_Nek4 Catalytic do 100.0 2.9E-35 6.3E-40 295.6 20.4 248 393-665 1-253 (257)
259 cd06629 STKc_MAPKKK_Bck1_like 100.0 4E-35 8.6E-40 297.2 21.5 254 393-665 2-268 (272)
260 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.6E-35 5.7E-40 300.9 19.7 251 392-665 1-261 (286)
261 cd05074 PTKc_Tyro3 Catalytic d 100.0 2E-35 4.4E-40 299.6 18.6 254 394-670 1-272 (273)
262 cd05086 PTKc_Aatyk2 Catalytic 100.0 6.8E-35 1.5E-39 294.7 22.4 252 398-668 1-267 (268)
263 cd08218 STKc_Nek1 Catalytic do 100.0 2.3E-35 5E-40 296.1 18.7 248 393-665 1-252 (256)
264 cd06647 STKc_PAK_I Catalytic d 100.0 2.2E-35 4.9E-40 302.2 18.9 253 389-666 16-269 (293)
265 cd05083 PTKc_Chk Catalytic dom 100.0 1.3E-35 2.9E-40 297.5 16.9 246 392-669 6-253 (254)
266 KOG0667 Dual-specificity tyros 100.0 6.6E-36 1.4E-40 310.7 14.9 195 393-597 187-391 (586)
267 cd07844 STKc_PCTAIRE_like Cata 100.0 2.9E-35 6.3E-40 301.4 19.5 268 392-665 5-287 (291)
268 PTZ00266 NIMA-related protein 100.0 1.2E-35 2.6E-40 332.5 17.9 253 390-665 11-294 (1021)
269 cd06651 STKc_MEKK3 Catalytic d 100.0 3.9E-35 8.4E-40 296.3 19.9 250 392-665 2-260 (266)
270 PTZ00284 protein kinase; Provi 100.0 1.6E-35 3.5E-40 322.7 18.4 267 387-665 124-437 (467)
271 cd08528 STKc_Nek10 Catalytic d 100.0 3.3E-35 7.1E-40 297.4 19.2 251 393-668 1-268 (269)
272 cd07832 STKc_CCRK Catalytic do 100.0 9.6E-35 2.1E-39 296.7 22.8 267 393-665 1-281 (286)
273 cd06632 STKc_MEKK1_plant Catal 100.0 7E-35 1.5E-39 292.9 21.5 247 393-665 1-254 (258)
274 cd06639 STKc_myosinIIIB Cataly 100.0 2.8E-35 6.1E-40 301.5 18.7 260 382-665 12-286 (291)
275 cd06608 STKc_myosinIII_like Ca 100.0 3.5E-35 7.5E-40 298.1 19.1 252 390-665 4-271 (275)
276 cd06659 STKc_PAK6 Catalytic do 100.0 1.8E-35 3.9E-40 303.3 17.1 249 393-666 22-271 (297)
277 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-34 2.5E-39 300.8 23.3 195 397-597 6-219 (317)
278 cd07841 STKc_CDK7 Catalytic do 100.0 6.6E-35 1.4E-39 299.8 21.1 265 393-665 1-281 (298)
279 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3E-35 6.6E-40 299.8 18.3 257 384-665 8-278 (282)
280 cd06658 STKc_PAK5 Catalytic do 100.0 1.4E-35 3E-40 303.4 15.6 248 394-666 24-272 (292)
281 cd06630 STKc_MEKK1 Catalytic d 100.0 6E-35 1.3E-39 295.3 19.9 253 393-665 1-263 (268)
282 cd07833 STKc_CDKL Catalytic do 100.0 6.4E-35 1.4E-39 298.3 20.4 269 392-665 1-284 (288)
283 cd05586 STKc_Sck1_like Catalyt 100.0 7.1E-36 1.5E-40 311.3 13.6 240 400-665 1-252 (330)
284 cd06626 STKc_MEKK4 Catalytic d 100.0 7.7E-35 1.7E-39 293.7 20.7 252 393-665 1-260 (264)
285 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.7E-35 1.9E-39 296.6 21.0 249 392-665 1-260 (283)
286 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.6E-35 7.7E-40 299.9 17.9 266 392-665 1-282 (286)
287 cd08220 STKc_Nek8 Catalytic do 100.0 5.7E-35 1.2E-39 293.2 19.0 247 393-665 1-252 (256)
288 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.2E-34 4.8E-39 294.1 23.6 255 392-665 1-265 (287)
289 KOG0200 Fibroblast/platelet-de 100.0 3.9E-35 8.4E-40 325.3 19.4 263 388-672 292-581 (609)
290 cd05609 STKc_MAST Catalytic do 100.0 1E-34 2.2E-39 299.2 21.1 255 392-668 1-272 (305)
291 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-34 2.3E-39 296.4 20.4 253 389-665 16-269 (286)
292 cd06623 PKc_MAPKK_plant_like C 100.0 2.6E-34 5.6E-39 289.8 22.9 252 392-666 1-256 (264)
293 cd06917 STKc_NAK1_like Catalyt 100.0 9E-35 1.9E-39 295.5 19.6 247 393-665 2-254 (277)
294 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-34 2.7E-39 299.0 20.8 248 390-666 13-267 (307)
295 cd05574 STKc_phototropin_like 100.0 9.2E-35 2E-39 301.3 19.9 252 392-665 1-288 (316)
296 cd05122 PKc_STE Catalytic doma 100.0 2.5E-34 5.3E-39 287.7 22.2 249 393-665 1-250 (253)
297 cd05580 STKc_PKA Catalytic dom 100.0 6.9E-35 1.5E-39 298.3 18.5 244 392-665 1-253 (290)
298 cd06652 STKc_MEKK2 Catalytic d 100.0 1.5E-34 3.2E-39 291.8 20.5 250 392-665 2-260 (265)
299 cd07843 STKc_CDC2L1 Catalytic 100.0 1.2E-34 2.5E-39 297.2 19.8 267 392-665 5-289 (293)
300 KOG0690 Serine/threonine prote 100.0 5.7E-36 1.2E-40 282.9 8.8 242 390-658 166-411 (516)
301 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-34 2.6E-39 295.7 19.2 248 393-665 20-268 (285)
302 cd08217 STKc_Nek2 Catalytic do 100.0 3.6E-34 7.8E-39 288.8 22.2 251 393-665 1-261 (265)
303 cd07860 STKc_CDK2_3 Catalytic 100.0 1.5E-34 3.3E-39 295.0 19.4 264 393-665 1-280 (284)
304 cd06641 STKc_MST3 Catalytic do 100.0 2.5E-34 5.3E-39 292.2 20.4 247 393-666 5-253 (277)
305 cd07831 STKc_MOK Catalytic dom 100.0 4.3E-34 9.3E-39 291.3 21.9 260 394-665 1-278 (282)
306 cd07842 STKc_CDK8_like Catalyt 100.0 3.2E-34 6.9E-39 297.4 21.1 269 393-665 1-312 (316)
307 cd07845 STKc_CDK10 Catalytic d 100.0 2E-34 4.2E-39 297.8 19.4 268 390-665 5-289 (309)
308 KOG0986 G protein-coupled rece 100.0 9.6E-36 2.1E-40 293.4 9.0 245 390-659 183-434 (591)
309 KOG0586 Serine/threonine prote 100.0 7.6E-35 1.7E-39 299.5 16.0 249 390-666 54-306 (596)
310 PHA03390 pk1 serine/threonine- 100.0 6E-34 1.3E-38 287.4 22.1 248 386-665 8-261 (267)
311 cd05578 STKc_Yank1 Catalytic d 100.0 2.2E-34 4.7E-39 289.4 18.5 247 393-664 1-253 (258)
312 cd07835 STKc_CDK1_like Catalyt 100.0 3.2E-34 6.9E-39 292.4 19.7 263 394-665 1-279 (283)
313 cd06606 STKc_MAPKKK Catalytic 100.0 7.8E-34 1.7E-38 285.3 22.2 251 393-665 1-256 (260)
314 cd07836 STKc_Pho85 Catalytic d 100.0 7E-34 1.5E-38 290.1 21.9 266 393-665 1-280 (284)
315 PHA02882 putative serine/threo 100.0 3.7E-34 8.1E-39 293.2 19.7 259 391-667 11-293 (294)
316 cd07840 STKc_CDK9_like Catalyt 100.0 4.4E-34 9.5E-39 292.0 20.1 266 394-665 1-283 (287)
317 cd07837 STKc_CdkB_plant Cataly 100.0 5.4E-34 1.2E-38 292.6 20.4 265 392-665 1-290 (295)
318 cd06635 STKc_TAO1 Catalytic do 100.0 6.5E-34 1.4E-38 294.8 21.2 246 393-667 26-278 (317)
319 cd08216 PK_STRAD Pseudokinase 100.0 7.9E-34 1.7E-38 294.1 21.8 263 396-665 6-294 (314)
320 cd07865 STKc_CDK9 Catalytic do 100.0 5.1E-34 1.1E-38 295.0 20.0 272 390-665 10-306 (310)
321 KOG1035 eIF-2alpha kinase GCN2 100.0 6.2E-35 1.3E-39 319.1 13.6 255 389-665 476-870 (1351)
322 cd05572 STKc_cGK_PKG Catalytic 100.0 7.5E-34 1.6E-38 286.2 19.9 242 400-665 1-251 (262)
323 cd08226 PK_STRAD_beta Pseudoki 100.0 1.2E-33 2.6E-38 294.2 21.9 273 398-673 4-317 (328)
324 cd07864 STKc_CDK12 Catalytic d 100.0 7.3E-34 1.6E-38 292.7 20.0 270 389-665 4-298 (302)
325 KOG4645 MAPKKK (MAP kinase kin 100.0 9.1E-36 2E-40 327.1 6.0 253 390-665 1233-1493(1509)
326 cd06657 STKc_PAK4 Catalytic do 100.0 9.1E-34 2E-38 289.9 20.4 244 397-665 25-269 (292)
327 cd08215 STKc_Nek Catalytic dom 100.0 1.1E-33 2.4E-38 283.9 20.7 248 393-665 1-254 (258)
328 KOG0666 Cyclin C-dependent kin 100.0 4.7E-35 1E-39 275.5 9.8 271 391-665 23-336 (438)
329 cd05633 STKc_GRK3 Catalytic do 100.0 1.3E-33 2.8E-38 286.9 21.3 242 399-666 1-255 (279)
330 KOG4250 TANK binding protein k 100.0 1.9E-34 4.1E-39 300.4 15.2 277 394-676 15-316 (732)
331 cd05118 STKc_CMGC Catalytic do 100.0 1.5E-33 3.3E-38 287.4 21.7 263 394-665 1-279 (283)
332 cd07849 STKc_ERK1_2_like Catal 100.0 3.8E-34 8.3E-39 299.1 17.6 268 391-666 4-292 (336)
333 KOG0584 Serine/threonine prote 100.0 6.1E-35 1.3E-39 300.4 11.3 245 395-665 43-295 (632)
334 PHA03210 serine/threonine kina 100.0 3.4E-34 7.3E-39 313.3 17.8 270 391-665 147-453 (501)
335 cd07850 STKc_JNK Catalytic dom 100.0 8.4E-34 1.8E-38 298.5 20.0 263 390-665 14-310 (353)
336 cd08225 STKc_Nek5 Catalytic do 100.0 8.9E-34 1.9E-38 284.7 19.0 248 393-665 1-253 (257)
337 cd07852 STKc_MAPK15 Catalytic 100.0 7.1E-34 1.5E-38 297.3 19.0 268 390-666 5-295 (337)
338 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-33 2.6E-38 287.2 20.0 243 400-665 1-253 (277)
339 cd07855 STKc_ERK5 Catalytic do 100.0 6.1E-34 1.3E-38 297.3 18.2 268 391-665 4-293 (334)
340 cd06616 PKc_MKK4 Catalytic dom 100.0 6.3E-34 1.4E-38 291.0 17.9 253 393-666 5-267 (288)
341 KOG4194 Membrane glycoprotein 100.0 8E-36 1.7E-40 302.0 3.8 306 1-321 153-460 (873)
342 PLN00009 cyclin-dependent kina 100.0 1.2E-33 2.5E-38 289.9 19.9 264 392-665 2-283 (294)
343 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-33 2.6E-38 283.2 19.3 247 393-665 1-250 (254)
344 KOG0983 Mitogen-activated prot 100.0 9.1E-35 2E-39 268.9 9.9 249 394-665 94-348 (391)
345 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-33 3.2E-38 289.4 20.0 252 391-666 14-273 (296)
346 cd05579 STKc_MAST_like Catalyt 100.0 6.2E-34 1.4E-38 287.1 16.7 245 400-667 1-255 (265)
347 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-33 2.5E-38 283.7 18.1 246 393-665 1-252 (256)
348 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-33 2.7E-38 284.2 17.9 241 398-665 2-247 (260)
349 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.8E-33 8.3E-38 281.4 21.4 250 392-665 2-260 (264)
350 cd07838 STKc_CDK4_6_like Catal 100.0 3.7E-33 8.1E-38 285.1 21.6 264 394-665 1-283 (287)
351 PLN00113 leucine-rich repeat r 100.0 1.5E-33 3.2E-38 335.3 21.4 301 1-318 264-589 (968)
352 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-33 2.4E-38 295.6 18.0 273 391-671 4-298 (337)
353 cd06634 STKc_TAO2 Catalytic do 100.0 2.6E-33 5.5E-38 289.1 20.2 246 392-666 15-267 (308)
354 cd07834 STKc_MAPK Catalytic do 100.0 1.6E-33 3.4E-38 293.9 18.3 272 393-671 1-296 (330)
355 PTZ00024 cyclin-dependent prot 100.0 3.7E-33 7.9E-38 291.7 21.0 269 391-665 7-312 (335)
356 KOG0607 MAP kinase-interacting 100.0 5E-34 1.1E-38 269.4 12.8 259 398-665 84-360 (463)
357 cd06633 STKc_TAO3 Catalytic do 100.0 8.1E-33 1.8E-37 285.9 22.8 244 394-666 23-273 (313)
358 cd05606 STKc_beta_ARK Catalyti 100.0 9.1E-33 2E-37 280.7 22.7 241 399-665 1-254 (278)
359 KOG0669 Cyclin T-dependent kin 100.0 1.8E-35 3.8E-40 270.4 1.5 271 391-665 16-314 (376)
360 cd07866 STKc_BUR1 Catalytic do 100.0 3.7E-33 8.1E-38 288.7 19.1 270 391-665 7-307 (311)
361 cd07830 STKc_MAK_like Catalyti 100.0 6.4E-33 1.4E-37 282.8 20.5 263 394-665 1-279 (283)
362 cd05583 STKc_MSK_N N-terminal 100.0 2.8E-33 6.2E-38 286.1 17.8 254 393-668 1-265 (288)
363 cd05581 STKc_PDK1 Catalytic do 100.0 2.6E-33 5.7E-38 285.1 17.5 249 392-665 1-276 (280)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.8E-33 6.1E-38 293.1 18.1 266 387-664 10-296 (343)
365 cd07879 STKc_p38delta_MAPK13 C 100.0 4E-33 8.6E-38 292.0 19.0 266 391-671 14-304 (342)
366 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.3E-33 5E-38 293.7 16.9 267 391-665 4-299 (342)
367 cd05613 STKc_MSK1_N N-terminal 100.0 7.7E-33 1.7E-37 283.2 20.4 251 393-665 1-267 (290)
368 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.8E-33 1E-37 289.3 19.0 266 389-666 7-288 (328)
369 cd07829 STKc_CDK_like Catalyti 100.0 8E-33 1.7E-37 281.9 20.1 263 394-665 1-278 (282)
370 KOG0612 Rho-associated, coiled 100.0 4.9E-34 1.1E-38 309.6 10.8 257 386-665 69-337 (1317)
371 KOG0604 MAP kinase-activated p 100.0 8.8E-34 1.9E-38 265.8 10.9 252 390-665 59-321 (400)
372 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.9E-33 1.1E-37 291.5 17.8 270 385-666 10-300 (345)
373 cd07851 STKc_p38 Catalytic dom 100.0 2.9E-33 6.3E-38 293.1 15.9 263 390-665 13-297 (343)
374 cd08222 STKc_Nek11 Catalytic d 100.0 7.9E-33 1.7E-37 278.4 16.9 247 393-665 1-256 (260)
375 KOG1151 Tousled-like protein k 100.0 7.6E-34 1.6E-38 278.6 7.9 256 392-664 463-739 (775)
376 KOG0662 Cyclin-dependent kinas 100.0 9.4E-33 2E-37 240.0 13.6 263 393-665 3-282 (292)
377 cd07857 STKc_MPK1 Catalytic do 100.0 2.1E-32 4.6E-37 285.4 18.5 267 393-665 1-291 (332)
378 cd05123 STKc_AGC Catalytic dom 100.0 6.5E-32 1.4E-36 270.0 20.4 236 400-662 1-240 (250)
379 KOG4194 Membrane glycoprotein 100.0 2.2E-34 4.8E-39 291.6 1.7 298 3-318 108-434 (873)
380 KOG0603 Ribosomal protein S6 k 100.0 1.1E-32 2.4E-37 285.1 14.1 239 391-665 321-562 (612)
381 KOG0587 Traf2- and Nck-interac 100.0 3.7E-32 7.9E-37 288.7 16.9 258 384-665 11-281 (953)
382 cd05610 STKc_MASTL Catalytic d 100.0 1E-31 2.2E-36 302.8 20.5 146 391-540 3-152 (669)
383 KOG0696 Serine/threonine prote 100.0 8.6E-33 1.9E-37 269.1 9.3 243 390-659 347-594 (683)
384 cd05576 STKc_RPK118_like Catal 100.0 1E-31 2.2E-36 266.1 16.8 220 403-661 4-224 (237)
385 KOG1006 Mitogen-activated prot 100.0 8.7E-34 1.9E-38 261.5 1.7 250 397-666 69-327 (361)
386 KOG0695 Serine/threonine prote 100.0 7.7E-32 1.7E-36 255.9 12.9 249 390-659 248-503 (593)
387 KOG4236 Serine/threonine prote 100.0 2.5E-32 5.4E-37 273.2 9.6 242 397-664 569-817 (888)
388 KOG0614 cGMP-dependent protein 100.0 4.4E-33 9.5E-38 277.8 3.6 243 391-659 419-665 (732)
389 KOG0671 LAMMER dual specificit 100.0 6.3E-32 1.4E-36 262.3 10.0 265 391-665 88-405 (415)
390 smart00220 S_TKc Serine/Threon 100.0 2.3E-30 5.1E-35 257.1 19.4 238 404-665 1-240 (244)
391 PLN03225 Serine/threonine-prot 100.0 1.1E-30 2.3E-35 287.0 17.3 258 390-665 130-449 (566)
392 KOG0608 Warts/lats-like serine 100.0 6.7E-31 1.5E-35 268.3 12.2 206 393-602 630-879 (1034)
393 PLN03224 probable serine/threo 100.0 3.8E-30 8.2E-35 275.1 18.4 261 390-665 143-499 (507)
394 KOG1027 Serine/threonine prote 100.0 2.9E-31 6.2E-36 280.6 7.5 243 394-665 511-766 (903)
395 KOG0668 Casein kinase II, alph 100.0 3.7E-30 7.9E-35 232.5 10.3 262 390-665 36-321 (338)
396 KOG0984 Mitogen-activated prot 100.0 5.5E-30 1.2E-34 228.0 10.2 215 389-609 43-267 (282)
397 KOG0664 Nemo-like MAPK-related 100.0 1.5E-31 3.2E-36 247.3 -0.4 262 395-666 56-343 (449)
398 KOG0444 Cytoskeletal regulator 100.0 4.7E-31 1E-35 269.1 -1.0 294 3-318 84-380 (1255)
399 KOG1152 Signal transduction se 100.0 3.2E-29 7E-34 254.1 10.3 198 391-596 560-771 (772)
400 cd00180 PKc Catalytic domain o 100.0 1.5E-27 3.2E-32 231.3 21.1 210 400-666 1-214 (215)
401 KOG0576 Mitogen-activated prot 100.0 7.4E-30 1.6E-34 263.0 3.6 254 390-665 13-270 (829)
402 KOG1290 Serine/threonine prote 100.0 1.5E-27 3.3E-32 237.9 18.5 132 391-526 77-222 (590)
403 KOG0665 Jun-N-terminal kinase 99.9 3.4E-28 7.4E-33 230.9 9.9 256 391-665 16-309 (369)
404 KOG0444 Cytoskeletal regulator 99.9 7.1E-30 1.5E-34 260.5 -2.3 271 1-295 107-380 (1255)
405 smart00221 STYKc Protein kinas 99.9 9.9E-27 2.2E-31 228.3 18.5 199 394-596 1-202 (225)
406 KOG1345 Serine/threonine kinas 99.9 8E-28 1.7E-32 222.8 9.8 257 389-669 21-287 (378)
407 KOG0670 U4/U6-associated splic 99.9 1.9E-27 4.2E-32 238.3 9.0 203 388-599 428-640 (752)
408 KOG1167 Serine/threonine prote 99.9 9E-27 2E-31 229.8 12.5 269 388-665 32-380 (418)
409 KOG0195 Integrin-linked kinase 99.9 8.1E-27 1.7E-31 216.0 4.6 250 394-671 192-447 (448)
410 smart00750 KIND kinase non-cat 99.9 2.2E-25 4.8E-30 209.9 14.4 171 473-674 1-173 (176)
411 KOG0472 Leucine-rich repeat pr 99.9 3.1E-28 6.6E-33 237.1 -6.3 294 2-313 142-541 (565)
412 KOG4237 Extracellular matrix p 99.9 1.3E-27 2.8E-32 232.6 -3.5 297 5-321 54-367 (498)
413 PLN00181 protein SPA1-RELATED; 99.9 1.8E-25 4E-30 258.5 9.9 195 445-665 29-264 (793)
414 KOG0472 Leucine-rich repeat pr 99.9 2.1E-27 4.5E-32 231.4 -7.6 265 22-313 46-310 (565)
415 KOG4237 Extracellular matrix p 99.9 3.2E-27 6.9E-32 229.9 -6.7 298 2-317 72-385 (498)
416 PRK15387 E3 ubiquitin-protein 99.9 3.8E-23 8.1E-28 228.8 15.6 256 1-315 205-460 (788)
417 PRK09188 serine/threonine prot 99.9 3.3E-23 7.2E-28 212.6 14.2 168 388-569 14-195 (365)
418 KOG1164 Casein kinase (serine/ 99.9 7.9E-22 1.7E-26 203.7 20.7 261 393-673 19-300 (322)
419 KOG0590 Checkpoint kinase and 99.9 7.8E-23 1.7E-27 223.9 8.0 254 395-665 321-584 (601)
420 KOG1165 Casein kinase (serine/ 99.9 4.5E-21 9.7E-26 183.2 18.7 265 391-674 27-303 (449)
421 PRK15387 E3 ubiquitin-protein 99.9 5.2E-22 1.1E-26 219.8 14.1 237 2-295 227-463 (788)
422 PRK15370 E3 ubiquitin-protein 99.9 3.2E-22 7E-27 223.0 12.3 242 2-290 183-428 (754)
423 KOG0618 Serine/threonine phosp 99.9 1.3E-23 2.9E-28 224.9 0.5 293 2-312 73-488 (1081)
424 KOG1163 Casein kinase (serine/ 99.9 1.6E-21 3.4E-26 178.2 12.8 264 390-672 13-286 (341)
425 COG0515 SPS1 Serine/threonine 99.9 1.8E-20 3.9E-25 195.6 21.9 258 394-666 2-275 (384)
426 PLN03210 Resistant to P. syrin 99.9 1.5E-20 3.3E-25 224.2 21.9 277 3-311 595-904 (1153)
427 PRK15370 E3 ubiquitin-protein 99.9 3.3E-21 7.1E-26 215.0 13.3 248 21-314 178-429 (754)
428 PRK10359 lipopolysaccharide co 99.8 1.9E-21 4.1E-26 185.2 8.7 171 390-588 29-216 (232)
429 cd05147 RIO1_euk RIO kinase fa 99.8 2.3E-20 5.1E-25 176.3 12.7 139 397-542 2-167 (190)
430 KOG0618 Serine/threonine phosp 99.8 3.1E-22 6.6E-27 214.6 -2.1 247 20-289 240-488 (1081)
431 KOG1240 Protein kinase contain 99.8 2.8E-21 6E-26 210.4 4.7 248 393-667 24-292 (1431)
432 KOG1023 Natriuretic peptide re 99.8 3.5E-20 7.6E-25 193.3 11.6 216 442-672 1-226 (484)
433 PRK12274 serine/threonine prot 99.8 1.8E-19 3.9E-24 167.6 13.7 189 395-599 5-212 (218)
434 cd00116 LRR_RI Leucine-rich re 99.8 4.2E-21 9.1E-26 199.3 2.9 281 2-289 3-319 (319)
435 cd05145 RIO1_like RIO kinase f 99.8 2.8E-19 6E-24 169.8 14.7 139 397-543 2-168 (190)
436 KOG4158 BRPK/PTEN-induced prot 99.8 6.5E-20 1.4E-24 179.2 9.0 195 446-667 274-511 (598)
437 PF14531 Kinase-like: Kinase-l 99.8 2.6E-19 5.7E-24 175.7 12.3 231 393-657 13-288 (288)
438 KOG0617 Ras suppressor protein 99.8 3E-21 6.4E-26 167.4 -2.6 160 101-275 34-194 (264)
439 KOG0603 Ribosomal protein S6 k 99.8 1.9E-20 4.2E-25 194.7 1.9 224 400-660 2-232 (612)
440 PLN03210 Resistant to P. syrin 99.8 3.3E-18 7.1E-23 204.3 19.3 279 13-310 550-835 (1153)
441 cd00116 LRR_RI Leucine-rich re 99.8 2.6E-20 5.6E-25 193.4 0.9 281 25-312 2-319 (319)
442 KOG0617 Ras suppressor protein 99.8 2.1E-20 4.6E-25 162.1 -2.9 179 120-313 29-212 (264)
443 KOG1166 Mitotic checkpoint ser 99.8 9.2E-18 2E-22 187.2 15.7 252 389-673 695-956 (974)
444 PRK10345 hypothetical protein; 99.8 1.3E-17 2.7E-22 158.9 14.3 136 395-539 5-156 (210)
445 smart00090 RIO RIO-like kinase 99.7 2.9E-17 6.2E-22 160.6 12.5 141 393-542 29-198 (237)
446 cd05144 RIO2_C RIO kinase fami 99.7 1.5E-16 3.3E-21 152.4 13.2 141 389-543 12-176 (198)
447 PRK14879 serine/threonine prot 99.7 1.6E-16 3.6E-21 154.1 13.6 134 398-541 2-143 (211)
448 KOG0606 Microtubule-associated 99.7 5.2E-17 1.1E-21 177.4 7.6 212 391-661 82-307 (1205)
449 PRK09605 bifunctional UGMP fam 99.7 4.5E-16 9.8E-21 171.9 15.0 139 389-541 330-476 (535)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 4.6E-16 1E-20 149.4 12.5 130 399-541 1-138 (199)
451 KOG1033 eIF-2alpha kinase PEK/ 99.6 4.5E-17 9.8E-22 166.6 2.4 122 462-589 330-457 (516)
452 KOG0590 Checkpoint kinase and 99.6 9E-17 2E-21 176.3 1.3 256 391-664 19-284 (601)
453 cd05119 RIO RIO kinase family, 99.6 6.8E-15 1.5E-19 139.8 12.3 136 397-543 2-165 (187)
454 cd05120 APH_ChoK_like Aminogly 99.6 2E-14 4.3E-19 131.4 12.9 135 396-541 2-138 (155)
455 PRK01723 3-deoxy-D-manno-octul 99.5 5.4E-14 1.2E-18 137.9 13.6 135 397-541 36-191 (239)
456 KOG1909 Ran GTPase-activating 99.5 9.1E-16 2E-20 148.7 -0.5 248 16-290 25-311 (382)
457 KOG0532 Leucine-rich repeat (L 99.5 7.8E-16 1.7E-20 157.5 -3.2 194 49-266 54-247 (722)
458 KOG0532 Leucine-rich repeat (L 99.5 3.2E-15 7E-20 153.1 -1.4 198 25-238 54-252 (722)
459 KOG3207 Beta-tubulin folding c 99.5 7.6E-15 1.7E-19 146.0 0.2 215 13-232 113-339 (505)
460 COG4886 Leucine-rich repeat (L 99.4 9.7E-14 2.1E-18 148.3 6.3 196 25-235 97-293 (394)
461 TIGR01982 UbiB 2-polyprenylphe 99.4 6E-13 1.3E-17 142.0 11.8 141 397-543 122-308 (437)
462 COG4886 Leucine-rich repeat (L 99.4 2.8E-13 6.1E-18 144.7 8.7 179 101-296 117-296 (394)
463 KOG1259 Nischarin, modulator o 99.4 5.4E-14 1.2E-18 133.1 1.8 135 120-269 280-415 (490)
464 KOG1243 Protein kinase [Genera 99.4 6.6E-12 1.4E-16 132.7 17.4 168 412-591 33-200 (690)
465 PLN03150 hypothetical protein; 99.4 1.7E-12 3.6E-17 145.1 10.0 111 198-318 420-533 (623)
466 KOG0601 Cyclin-dependent kinas 99.4 1.4E-12 3E-17 136.7 8.4 248 393-665 115-378 (524)
467 KOG1259 Nischarin, modulator o 99.4 1.3E-13 2.9E-18 130.5 0.6 136 145-295 281-417 (490)
468 KOG3207 Beta-tubulin folding c 99.4 1.2E-13 2.5E-18 137.7 0.2 217 43-291 119-340 (505)
469 KOG1266 Protein kinase [Signal 99.3 2.1E-12 4.6E-17 124.2 7.7 198 442-666 121-331 (458)
470 KOG0531 Protein phosphatase 1, 99.3 1.4E-13 3E-18 147.2 -0.8 195 20-232 71-268 (414)
471 PF14580 LRR_9: Leucine-rich r 99.3 3.5E-12 7.6E-17 116.8 6.0 122 3-137 3-126 (175)
472 PRK04750 ubiB putative ubiquin 99.3 1.7E-11 3.7E-16 132.2 10.3 147 391-544 119-316 (537)
473 cd05151 ChoK Choline Kinase (C 99.3 2.5E-11 5.5E-16 113.2 10.3 127 397-540 3-135 (170)
474 KOG1909 Ran GTPase-activating 99.3 5.1E-13 1.1E-17 129.8 -1.2 245 2-266 35-311 (382)
475 PF14580 LRR_9: Leucine-rich r 99.2 5.7E-12 1.2E-16 115.3 5.1 107 122-232 17-126 (175)
476 KOG0531 Protein phosphatase 1, 99.2 2.1E-12 4.5E-17 138.2 0.4 210 3-232 78-290 (414)
477 cd05146 RIO3_euk RIO kinase fa 99.2 3.2E-10 7E-15 106.0 13.8 136 398-543 3-175 (197)
478 PLN03150 hypothetical protein; 99.2 5.1E-11 1.1E-15 133.2 9.4 113 173-295 419-533 (623)
479 COG4248 Uncharacterized protei 99.1 4E-09 8.7E-14 105.5 18.3 267 395-676 14-306 (637)
480 cd05154 ACAD10_11_like Acyl-Co 99.1 1.3E-09 2.8E-14 106.6 13.3 141 398-540 4-205 (223)
481 COG3642 Mn2+-dependent serine/ 99.1 1.7E-09 3.6E-14 97.3 12.3 131 398-541 2-140 (204)
482 KOG0601 Cyclin-dependent kinas 99.0 1.4E-10 3E-15 121.8 4.4 250 389-671 262-519 (524)
483 KOG3087 Serine/threonine prote 99.0 3.3E-09 7.2E-14 94.8 11.8 142 396-541 11-165 (229)
484 COG5238 RNA1 Ran GTPase-activa 99.0 5.4E-11 1.2E-15 111.6 0.1 249 17-291 26-317 (388)
485 KOG0606 Microtubule-associated 99.0 2.1E-10 4.4E-15 126.7 3.9 250 390-661 802-1084(1205)
486 KOG1859 Leucine-rich repeat pr 98.9 1.4E-11 3.1E-16 129.9 -7.6 129 149-293 165-295 (1096)
487 PF01163 RIO1: RIO1 family; I 98.9 7.6E-09 1.7E-13 96.5 11.1 125 407-542 1-156 (188)
488 KOG1859 Leucine-rich repeat pr 98.9 3.4E-11 7.5E-16 127.0 -5.4 181 117-316 102-295 (1096)
489 PF13855 LRR_8: Leucine rich r 98.9 1.1E-09 2.5E-14 82.3 3.6 59 101-159 2-60 (61)
490 PF13855 LRR_8: Leucine rich r 98.9 1.4E-09 3.1E-14 81.8 3.9 61 124-184 1-61 (61)
491 KOG3741 Poly(A) ribonuclease s 98.8 1.5E-07 3.2E-12 97.1 17.2 167 404-592 288-474 (655)
492 KOG2982 Uncharacterized conser 98.8 7E-10 1.5E-14 105.6 -0.0 218 12-234 36-264 (418)
493 KOG4658 Apoptotic ATPase [Sign 98.8 9.3E-09 2E-13 117.7 8.0 202 19-232 521-730 (889)
494 PRK15123 lipopolysaccharide co 98.8 8.9E-08 1.9E-12 95.0 13.5 139 398-540 28-193 (268)
495 KOG4579 Leucine-rich repeat (L 98.8 8.1E-10 1.8E-14 93.2 -1.3 134 150-296 29-165 (177)
496 COG0478 RIO-like serine/threon 98.8 5.8E-08 1.3E-12 92.8 10.7 135 394-541 93-251 (304)
497 KOG2982 Uncharacterized conser 98.7 3.6E-09 7.9E-14 100.8 2.5 208 75-291 46-263 (418)
498 KOG2137 Protein kinase [Signal 98.6 1.4E-08 3.1E-13 108.2 2.5 150 496-664 106-263 (700)
499 KOG4658 Apoptotic ATPase [Sign 98.6 3.2E-08 7E-13 113.3 5.2 205 43-268 521-732 (889)
500 KOG4579 Leucine-rich repeat (L 98.6 2.7E-09 5.9E-14 90.1 -2.7 136 102-240 29-167 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.9e-75 Score=690.04 Aligned_cols=635 Identities=28% Similarity=0.464 Sum_probs=457.5
Q ss_pred CccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEE
Q 005760 1 MLQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLIS 80 (678)
Q Consensus 1 ~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~ 80 (678)
.|+|++|.+++.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|+|++|.+....+ ..+..+++|+.|+
T Consensus 288 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-----~~l~~~~~L~~L~ 362 (968)
T PLN00113 288 SLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP-----KNLGKHNNLTVLD 362 (968)
T ss_pred EEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCC-----hHHhCCCCCcEEE
Confidence 36888898888888888888999999999999888888888888899999998888864332 2456677777777
Q ss_pred CccCCCcccCChhhhhccc-----------------------ccccEEEcccccccccCCccccCCCCCcEEEccCCccC
Q 005760 81 FSNNPLDGILPKTSVGNLS-----------------------HSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLN 137 (678)
Q Consensus 81 L~~n~i~~~~~~~~~~~l~-----------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (678)
+++|++.+..|.. +..+. .+|+.|++++|++++..|..|..+++|+.|++++|.++
T Consensus 363 Ls~n~l~~~~p~~-~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 441 (968)
T PLN00113 363 LSTNNLTGEIPEG-LCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQ 441 (968)
T ss_pred CCCCeeEeeCChh-HhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCccc
Confidence 7777776655543 22222 14555555555555555555555555555555555555
Q ss_pred CcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccc-ccccccc
Q 005760 138 GSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELT-SIPLTFW 216 (678)
Q Consensus 138 ~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~-~l~~~~~ 216 (678)
+..+..+..+++|++|+|++|.+.+.+|..+ ..++|+.|++++|++.+..|..+.++++|+.|+|++|+++ .+|..+.
T Consensus 442 ~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 520 (968)
T PLN00113 442 GRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELS 520 (968)
T ss_pred CccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHc
Confidence 5555555555666666666666655555433 3467777888888888888888888888999999999887 5677888
Q ss_pred ccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCC
Q 005760 217 NLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRG 296 (678)
Q Consensus 217 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 296 (678)
.+++|+.|+|++|.+++..|..|.+++ +|+.|+|++|++++..|..+..++.|+.|++++|++.+.+|..
T Consensus 521 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~----------~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 590 (968)
T PLN00113 521 SCKKLVSLDLSHNQLSGQIPASFSEMP----------VLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590 (968)
T ss_pred CccCCCEEECCCCcccccCChhHhCcc----------cCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc
Confidence 888999999999999988888888777 9999999999999999999999999999999999999999998
Q ss_pred CccccccccccccCccccCCCCC-CCCCCCCcccccccccceeeeehhhhHHHHHHHhhhhheeccccCCCCCC-CCCCC
Q 005760 297 GSFGNFSAESFEGNELLCGSPNL-RVPPCKTSIHHISRKNAFLLGIVLPLSTVFMIVVIFLIVKCRKRERGPPN-DANMP 374 (678)
Q Consensus 297 ~~~~~l~~~~~~~n~~~c~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 374 (678)
+.+..+...++.||+..|+.+.. ..++|..... ...+.+++++++++.+++++++++++++++|+....+. +....
T Consensus 591 ~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (968)
T PLN00113 591 GAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK--TPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDG 668 (968)
T ss_pred chhcccChhhhcCCccccCCccccCCCCCccccc--cceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence 88888888899999999975422 2445543211 11122222222122122222222222222222111111 10000
Q ss_pred hhhh---h-ccCCHHHHHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCcc
Q 005760 375 PEAM---Q-RMFSYLELCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRN 449 (678)
Q Consensus 375 ~~~~---~-~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n 449 (678)
.... . ..............|...+.||+|+||.||+|.. .++..||+|++..... ....|++.+++++|||
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~Hpn 744 (968)
T PLN00113 669 TWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPN 744 (968)
T ss_pred cccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCC
Confidence 0000 0 0001122333445678889999999999999986 5889999999864322 2235688999999999
Q ss_pred ceeeeeeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC
Q 005760 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM 529 (678)
Q Consensus 450 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~ 529 (678)
|++++++|.+++..++||||+++|+|.++++. +++..+..++.|+++|++|||..++.+|+|||+||+||+++.++
T Consensus 745 Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~ 820 (968)
T PLN00113 745 IVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD 820 (968)
T ss_pred cceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC
Confidence 99999999999999999999999999999963 78999999999999999999976677999999999999999999
Q ss_pred cEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh
Q 005760 530 VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 530 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 609 (678)
.+++. ||....... .....+++.|+|||++.+..++.++|||||||++|||++|+.||+...........|.+
T Consensus 821 ~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~ 893 (968)
T PLN00113 821 EPHLR-LSLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWAR 893 (968)
T ss_pred ceEEE-ecccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHH
Confidence 88876 665433211 12236789999999999999999999999999999999999999765555555666655
Q ss_pred cccC-CcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 610 DWLP-ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 610 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.... .....+.|+....... .......++.+++.+||+.||++||+|.|++++|+++...
T Consensus 894 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 894 YCYSDCHLDMWIDPSIRGDVS----VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HhcCccchhheeCccccCCCC----ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 3322 2233445554432211 1123456788999999999999999999999999998653
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-49 Score=406.43 Aligned_cols=288 Identities=41% Similarity=0.656 Sum_probs=243.9
Q ss_pred hhccCCHHHHHHhhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeee
Q 005760 378 MQRMFSYLELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC 457 (678)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 457 (678)
....|++.++..+|++|...+.||+|+||.||+|...+|+.||||++.........+|..|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 34568999999999999999999999999999999999999999988665433135599999999999999999999999
Q ss_pred ecCC-eEEEEEEecCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 458 SNEE-FKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 458 ~~~~-~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
.+.+ ..++|+||+++|+|.++++.... .++|.+|.+|+.++|+||+|||+.+...|+|||||++|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 59999999999999999998776 799999999999999999999988777899999999999999999999999
Q ss_pred eccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCccc-CCccchhhhhhcccC-
Q 005760 536 FGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIF-NGEMTLKHWVNDWLP- 613 (678)
Q Consensus 536 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~-~~~~~~~~~~~~~~~- 613 (678)
||+|+......... .....||.+|+|||+...+..+.|+|||||||++.|++||+.|.+... ..+..+..|......
T Consensus 221 FGLa~~~~~~~~~~-~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSV-STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred ccCcccCCccccce-eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 99996543211111 111179999999999999999999999999999999999999887644 344457788654443
Q ss_pred CcccccccCccCC-ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 614 ISTKEIVDPNLLS-REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 614 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
....+++|+.+.. ..... .....+..++.+|++.+|.+||+|.||+++|+.+.
T Consensus 300 ~~~~eiiD~~l~~~~~~~~-----~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDE-----KEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred cchhheeCCCccCCCCChH-----HHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 3688999998763 22211 34555889999999999999999999999997664
No 3
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-48 Score=393.12 Aligned_cols=256 Identities=30% Similarity=0.504 Sum_probs=221.9
Q ss_pred CCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 393 GFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
.+...+.||+|.||.||.|.++....||+|.++.. ....++|.+|+++|++|+|++||+++++|..++.+||||||++.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 34557899999999999999988889999999764 23447889999999999999999999999998899999999999
Q ss_pred CCHHHHhhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 473 GSLEKYLHS-SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 473 ~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
|+|.++++. .+..+...+.+.++.|||+|++||+ ++++|||||.++|||++++..|||+|||+|+.. ..+.+...
T Consensus 286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~-~d~~Y~~~ 361 (468)
T KOG0197|consen 286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLI-GDDEYTAS 361 (468)
T ss_pred CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEccccccccc-CCCceeec
Confidence 999999997 5567899999999999999999999 999999999999999999999999999999944 34455556
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
....-+..|+|||.+..+.++.|||||||||+|||++| |+.||..+...+.. +. -..+.
T Consensus 362 ~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~--~~------------------le~Gy 421 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVL--EL------------------LERGY 421 (468)
T ss_pred CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHH--HH------------------HhccC
Confidence 66778899999999999999999999999999999999 88888764443211 11 12334
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
+...|..|+.+++++|..||+.+|++|||++.+...|+.+...
T Consensus 422 Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 422 RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 5556678999999999999999999999999999999988653
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=9e-47 Score=366.02 Aligned_cols=252 Identities=25% Similarity=0.345 Sum_probs=209.3
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCC-eEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE-FKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 469 (678)
+.+..+.||+|..|+||+++++ +++-+|+|++.... ....+++.+|+++++..+||+||++||.|.... ..+++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 4455789999999999999865 78999999995443 446788999999999999999999999999888 59999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
|++|+|.+++...+ .+++....+++.+|++||.|||+ .++||||||||+|||++..|+|||||||.+..+.+.
T Consensus 160 MDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---- 232 (364)
T ss_pred cCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----
Confidence 99999999998764 48999999999999999999994 499999999999999999999999999999887543
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||....+......+... .+++....
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~--------~Iv~~ppP---- 300 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC--------AIVDEPPP---- 300 (364)
T ss_pred hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH--------HHhcCCCC----
Confidence 456788999999999999999999999999999999999999998764222222222111 11110000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.++ ...+++++.+++..|+++||.+||+++|+++
T Consensus 301 -~lP-~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 301 -RLP-EGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred -CCC-cccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 0136788999999999999999999999985
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-46 Score=380.29 Aligned_cols=258 Identities=31% Similarity=0.493 Sum_probs=213.1
Q ss_pred CCCCccccCCCceeEEEEEeCCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCC-eEEEEEEec
Q 005760 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEE-FKALVLEYM 470 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~ 470 (678)
....+.+|.|+||+||+|.+.....||+|++..... ...++|.+|+.++++++|||||+++|+|.++. ..++||||+
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 344566999999999999996555599999975432 22568999999999999999999999999887 789999999
Q ss_pred CCCCHHHHhhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eEEcCCCCCCeeecCCC-cEEEEeeccccccCCCCC
Q 005760 471 PHGSLEKYLHS-SNYILDIYQRLNIMIDVASALEYLHFGYSAQ-VIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 471 ~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dl~~~Nill~~~~-~~kl~Dfg~~~~~~~~~~ 547 (678)
++|+|.++++. ....+++..+..++.|||+||.||| +++ |||||||++|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 99999999988 3667999999999999999999999 888 99999999999999997 99999999998664321
Q ss_pred cceeecccCCccccCccccC--CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 548 STIQTQTLATIGYMAPEYGK--EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||.+.........-..... .|.
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~---------Rp~-- 266 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL---------RPP-- 266 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC---------CCC--
Confidence 3334478999999999999 56899999999999999999999999987554211111100100 000
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHHh
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~~ 675 (678)
.+..|++.+..+|.+||+.||++||++.|++..|+.+...+.
T Consensus 267 --------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 267 --------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred --------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 112267779999999999999999999999999999987653
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-46 Score=363.03 Aligned_cols=253 Identities=25% Similarity=0.367 Sum_probs=209.1
Q ss_pred hhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCc-------hhhhHHHHHHHHHhCCCccceeeeeeeecCC
Q 005760 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR-------VFKSFDVECEMMKSIRHRNIIKVISSCSNEE 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 461 (678)
..+.|.+.+.+|+|+||.|-+|. .++|+.||||++...... ....+.+|+++|++|+||+||+++++|..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 35678889999999999999996 568999999999654211 1234568999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC---CcEEEEeecc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGI 538 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~---~~~kl~Dfg~ 538 (678)
..|+||||++||+|.+++-..+. +.+.....++.|++.|+.||| +.||+||||||+|||+..+ ..+||+|||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccch
Confidence 99999999999999999987664 777778899999999999999 9999999999999999755 7899999999
Q ss_pred ccccCCCCCcceeecccCCccccCccccCCCCC---CccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCc
Q 005760 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV---SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS 615 (678)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (678)
|+..+ ........+||+.|.|||++.++.+ ..++|+||+||+||-+++|.+||.+.........+..++.
T Consensus 326 AK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~---- 398 (475)
T KOG0615|consen 326 AKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGR---- 398 (475)
T ss_pred hhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCc----
Confidence 99765 2333446789999999999887653 3478999999999999999999988655543333332221
Q ss_pred ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+...+.....+++..+++.+||..||++|||+.|+++
T Consensus 399 ------------y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 399 ------------YAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ------------ccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 12222334567888999999999999999999999985
No 7
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.2e-46 Score=396.75 Aligned_cols=260 Identities=30% Similarity=0.519 Sum_probs=226.7
Q ss_pred hcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFK 463 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 463 (678)
..+....+.||+|+||.||+|+. ++.+.||||.++..... .+++|++|++++..++|||||+++|+|.+++..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 34556678999999999999973 34567999999877665 789999999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCc
Q 005760 464 ALVLEYMPHGSLEKYLHSSN-------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMV 530 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~ 530 (678)
++|+|||..|||.+|++... ..++..+.+.||.|||.|++||. ++++|||||..+|+|+.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceE
Confidence 99999999999999997432 13778899999999999999999 999999999999999999999
Q ss_pred EEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhh
Q 005760 531 AHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 531 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~ 609 (678)
|||+|||+++..-..+++.......-+.+|||||.+..++++.+||||||||+|||+++ |+.||++....+.- +.++
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI--e~i~ 719 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI--ECIR 719 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH--HHHH
Confidence 99999999998888888888878889999999999999999999999999999999999 99999875554321 1111
Q ss_pred cccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 610 DWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.. .-+..+++||.++++||.+||+..|++||+++||-..|+++.+.
T Consensus 720 -----------~g-------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 720 -----------AG-------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred -----------cC-------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 11 11335578999999999999999999999999999999998654
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-45 Score=376.66 Aligned_cols=247 Identities=24% Similarity=0.353 Sum_probs=210.8
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
.+|...+.||+|||+.+|.++. .+|+.||+|++... .....+.+.+|+++.+.|+|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999999986 79999999999653 4556788899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+|..++|.+++++. ..+++.++..+.+||+.|+.||| +++|+|||||..|++++++.+|||+|||+|+.+...+
T Consensus 98 ELC~~~sL~el~Krr-k~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~- 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR-KPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG- 172 (592)
T ss_pred EecCCccHHHHHHhc-CCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcc-
Confidence 999999999999844 46999999999999999999999 9999999999999999999999999999999886432
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......+|||.|.|||++.+...+..+||||+||+||-|+.|++||+...-.+ .+.... ..+..-|
T Consensus 173 -Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-ty~~Ik-------~~~Y~~P----- 238 (592)
T KOG0575|consen 173 -ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-TYNKIK-------LNEYSMP----- 238 (592)
T ss_pred -cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-HHHHHH-------hcCcccc-----
Confidence 23445789999999999999999999999999999999999999997632111 111110 1111111
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+.++.+||.++|+.||.+|||+++|+.
T Consensus 239 --------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 239 --------SHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred --------cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 133455889999999999999999999985
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-45 Score=358.26 Aligned_cols=203 Identities=31% Similarity=0.526 Sum_probs=182.4
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
...+|...+.||.|+||+||+|+++ ++.+||||.+... .....+-...|+.+++.++|||||.+++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 3467889999999999999999854 7899999999765 344567778899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC------CcEEEEeecccc
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN------MVAHLSDFGIAK 540 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~------~~~kl~Dfg~~~ 540 (678)
||||.||||.+|+++.+ .+++..+..++.|||.|+++|| +++||||||||.|||++.. -.+||+|||+|+
T Consensus 88 MEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999999999886 4999999999999999999999 9999999999999999754 568999999999
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccC
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFN 599 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~ 599 (678)
.+. ........+|++.|||||++...+|+.|+|+||+|+++|||++|+.||+....
T Consensus 164 ~L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 164 FLQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hCC---chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 875 33445567899999999999999999999999999999999999999986433
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-45 Score=341.41 Aligned_cols=256 Identities=25% Similarity=0.385 Sum_probs=204.8
Q ss_pred cCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeee-eeecCC-eEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVIS-SCSNEE-FKALV 466 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~-~~~lv 466 (678)
.+|++.++||.|.||+||++. ..+|..||.|.+.-. .....++...|+.++++|+|||||++++ .+.+.. .+++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 457888999999999999996 679999999998633 3456678889999999999999999998 454444 48999
Q ss_pred EEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 467 LEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSA-QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
|||+..|||..+++. .+..+++..+|+++.|++.||.++|..+.+ -|+||||||.||+++.+|.||++|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999998863 445799999999999999999999943323 2889999999999999999999999999987
Q ss_pred CCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 543 TREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
... .......+|||.||+||.+.+..|+.+|||||+||++|||+.-++||.+. .-..+...+. .
T Consensus 179 ~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~-----------q- 242 (375)
T KOG0591|consen 179 SSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIE-----------Q- 242 (375)
T ss_pred cch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHH-----------c-
Confidence 533 33345688999999999999999999999999999999999999999863 1111111111 0
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
........+-++.++.+++..|+..||+.||+.-.++..+.
T Consensus 243 -----gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 243 -----GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred -----CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 00000112457888999999999999999998544444433
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-44 Score=338.63 Aligned_cols=267 Identities=22% Similarity=0.319 Sum_probs=208.4
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
+.|+...++|+|+||+||+.+.+ +|+-||||++... .+...+-..+|++++++++|||+|.++++|.....+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46788889999999999999865 7999999998532 23344556899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
||+. ++.+-+.......+...+..+..|++.|+.|+| +++++||||||+||+++.+|.+|+||||+|+.+.. ..
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--pg 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA--PG 155 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC--Cc
Confidence 9977 666666666667999999999999999999999 99999999999999999999999999999998863 33
Q ss_pred ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccch--hhhhhcccCCc---------c
Q 005760 549 TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTL--KHWVNDWLPIS---------T 616 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~--~~~~~~~~~~~---------~ 616 (678)
...+.++.|.+|.|||.+.+ .+|+..+||||+||++.||++|.+-|++..+-+... ...+....|+- +
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 44567889999999999887 679999999999999999999999887633321110 11111111110 1
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.-+.-|.....+..+.-. ...+..+.++++.|++.||++|++.+|++.
T Consensus 236 ~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111112222222211111 234557899999999999999999999875
No 12
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-44 Score=365.68 Aligned_cols=267 Identities=27% Similarity=0.436 Sum_probs=219.8
Q ss_pred HHHHHhhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCe
Q 005760 385 LELCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF 462 (678)
Q Consensus 385 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 462 (678)
.+.....+.+.+...||+|.||+||+|.|- -.||||++.... .+..++|+.|+.++++-+|.||+-+.|+|..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 444555666778899999999999999973 359999997653 3467899999999999999999999999999887
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
.||+.||+|.+|+.+++-.+..+++.+...|++|||.|+.||| .++|||||+|..||++.+++.|||+|||+++..
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 8999999999999999988888999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCcceeecccCCccccCccccCCC---CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccc
Q 005760 543 TREDQSTIQTQTLATIGYMAPEYGKEG---RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI 619 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (678)
..-..........|..-|||||+++.+ .|++++||||||+++|||++|..||.. ...+.-+ | .
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqIi--f-----------m 604 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQII--F-----------M 604 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhheE--E-----------E
Confidence 544333344556688899999988754 589999999999999999999999973 2221111 1 1
Q ss_pred ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 620 VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
+-....... ......+|+.++.+|+..||.+++++||.+.+|+..|+++..+
T Consensus 605 VGrG~l~pd--~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 605 VGRGYLMPD--LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred ecccccCcc--chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 111100000 1112346888999999999999999999999999999998764
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-44 Score=347.20 Aligned_cols=243 Identities=30% Similarity=0.381 Sum_probs=201.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
..++|++.+.||+|+||.||+++. ++++.+|+|++++.. ....+....|..++..++||+||+++..|++++.+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 356899999999999999999974 578999999996542 2346778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
|+||+.||.|..++++.+. +++..+..++.+|+.||.||| +++|||||+||+|||+|.+|+++|+|||+++.....
T Consensus 103 Vld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 9999999999999987764 888888899999999999999 999999999999999999999999999999855332
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
.......+||+.|||||++.+..|+.++|.||+|+++|||++|.+||.+...... .+....... ..-|.
T Consensus 179 --~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~-----~~~I~~~k~--~~~p~-- 247 (357)
T KOG0598|consen 179 --GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKM-----YDKILKGKL--PLPPG-- 247 (357)
T ss_pred --CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHH-----HHHHhcCcC--CCCCc--
Confidence 2223447899999999999999999999999999999999999999987433221 111111110 00000
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCC
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRI 658 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 658 (678)
-.+.+..+++.++++.||++|.
T Consensus 248 -----------~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 248 -----------YLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----------cCCHHHHHHHHHHhccCHHHhc
Confidence 1234578999999999999996
No 14
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.2e-43 Score=322.91 Aligned_cols=264 Identities=24% Similarity=0.370 Sum_probs=210.3
Q ss_pred cCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++|...+++|+|.||.||+|+ .++|+.||||+++.... .......+|+..++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 468888999999999999997 56899999999976532 234556889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|++. +|...++...-.++..++..++.++++|++||| .+.|+|||+||.|+|++++|.+||+|||+|+.++.....
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 9966 999999998889999999999999999999999 999999999999999999999999999999988755433
Q ss_pred ceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhh---hcccC---C---cccc
Q 005760 549 TIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWV---NDWLP---I---STKE 618 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~---~~~~~---~---~~~~ 618 (678)
.+..+.|.+|.|||.+.+. .|+..+||||.||++.||+-|.+-|.+ +.++.+.. +.... + .+..
T Consensus 158 --~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG----~sDidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 158 --QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG----DSDIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred --cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC----CchHHHHHHHHHHcCCCCcccCccccc
Confidence 3444789999999988876 599999999999999999988876654 22332221 11110 0 1111
Q ss_pred cccCccCC---ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 619 IVDPNLLS---REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 619 ~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
+.|..... ....+. --..++.++.+++..|+.+||.+|++++|++++
T Consensus 232 lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 22211111 111111 112466778999999999999999999999864
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-43 Score=355.92 Aligned_cols=253 Identities=26% Similarity=0.423 Sum_probs=210.1
Q ss_pred HHhhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecc---cCchhhhHHHHHHHHHhC-CCccceeeeeeeecCCe
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEF 462 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 462 (678)
.....+|..++.||+|+|++|++|+ ..+++.+|||++... .....+.+..|-..|..| .||.|++++..|++...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3345789999999999999999997 558999999998643 233446677899999999 79999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
+|+|+||+++|+|.+++++.+. +++.....++.||+.|++||| ++|||||||||+|||+|.+|+++|+|||.|+.+
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 9999999999999999998864 888889999999999999999 999999999999999999999999999999988
Q ss_pred CCCCCc---------c--eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcc
Q 005760 543 TREDQS---------T--IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW 611 (678)
Q Consensus 543 ~~~~~~---------~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~ 611 (678)
.+.... . ....++||..|.+||++..+..+..+|+|+|||++|+|+.|++||-+..+ ...++..
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-yliFqkI---- 299 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-YLIFQKI---- 299 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-HHHHHHH----
Confidence 653221 1 12558999999999999999999999999999999999999999965221 1111111
Q ss_pred cCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 612 LPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
++ .+...++..++.+.+|+++.|..||.+|++++||.+
T Consensus 300 --------~~--------l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 300 --------QA--------LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred --------HH--------hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 11 001112234566889999999999999999988865
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-43 Score=349.89 Aligned_cols=268 Identities=27% Similarity=0.351 Sum_probs=211.9
Q ss_pred hcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC--CeEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFKAL 465 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 465 (678)
.+.|+..++||+|.||.||+|+ ..+|+.||+|++..+. .+......+||.+|++|+||||+++.+...+. ..+|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 4567778999999999999997 5689999999997664 34455668999999999999999999988776 68999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
|+|||++ ||..++....-.++..++..++.|++.||+||| .+||+|||||.+|||+|.+|.+||+|||+|+.+...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999988 999999987778999999999999999999999 999999999999999999999999999999987654
Q ss_pred CCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh--------cccCCcc
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN--------DWLPIST 616 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~ 616 (678)
. ....+..+.|.+|.|||++.+. .|+.++|+||.||||.||++|++.|.+..+.+.. ....+ .|....+
T Consensus 272 ~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl-~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 272 G-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQL-HKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred C-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHH-HHHHHHhCCCChhccccccC
Confidence 3 3346778899999999988775 5999999999999999999999998774432211 11111 1111111
Q ss_pred c--ccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 K--EIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 ~--~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. ..+.+...-....... ....+....+|+..+|..||++|.||.++++
T Consensus 350 P~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1 1111111100111111 1345677899999999999999999999875
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-43 Score=352.39 Aligned_cols=267 Identities=22% Similarity=0.311 Sum_probs=212.2
Q ss_pred HhhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhh-HHHHHHHHHhCC-CccceeeeeeeecCC-eEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKS-FDVECEMMKSIR-HRNIIKVISSCSNEE-FKA 464 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~-~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~ 464 (678)
...++|...++||.|.||.||+|+ ..+|..||||.++.......+. -.+|+..+++++ ||||+++.+++.+.+ .+|
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 346789999999999999999997 5579999999997654433222 368999999998 999999999999888 999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+|||||+. +|+++++.++..+++..+..|+.||++||+|+| ++|+.|||+||+|||+.....+||+|||+|+.+..
T Consensus 87 fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999966 999999988889999999999999999999999 99999999999999999999999999999987753
Q ss_pred CCCcceeecccCCccccCcccc-CCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcc-------
Q 005760 545 EDQSTIQTQTLATIGYMAPEYG-KEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST------- 616 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~------- 616 (678)
. ...+.++.|.+|+|||++ +.+.|+.+.||||+||+++|+.+-++-|.+..+.+.-.+ +-.....+.
T Consensus 163 k---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~K--Ic~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 163 K---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYK--ICEVLGTPDKDSWPEG 237 (538)
T ss_pred C---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHH--HHHHhCCCccccchhH
Confidence 3 345678899999999965 556799999999999999999999988876444322111 111111110
Q ss_pred ---cc---cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 617 ---KE---IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 617 ---~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.. +.-|.... .......+ +++.++.+++.+|+.+||.+||||+|+++.
T Consensus 238 ~~La~~mnf~~P~~~~-~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKP-SPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHhccCCCcCCC-CChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 01 11111111 11112222 378889999999999999999999999863
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-43 Score=355.25 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=213.1
Q ss_pred hhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
....|....+||+|+.|.||.|. ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.|...+.+++|||
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 34578888999999999999996 56889999999987766667888999999999999999999999988899999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|++||+|.+.+.... +++.++..|+++++.||+||| .+||+|||||.+|||++.+|.+||+|||+|..+... .
T Consensus 351 ym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~--~ 423 (550)
T KOG0578|consen 351 YMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE--Q 423 (550)
T ss_pred ecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccc--c
Confidence 999999999997765 899999999999999999999 999999999999999999999999999999877543 2
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
..+...+||+.|||||+.....|++++||||||++++||+.|.+||-...+-. .-|.- . ...
T Consensus 424 ~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr---AlyLI----------a-----~ng 485 (550)
T KOG0578|consen 424 SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLI----------A-----TNG 485 (550)
T ss_pred CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH---HHHHH----------h-----hcC
Confidence 35567889999999999999999999999999999999999999986522111 11100 0 001
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..++..++..++.+.+++.+||+.||++|++|+|+++
T Consensus 486 ~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 486 TPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 1111223345677999999999999999999999986
No 19
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-42 Score=342.23 Aligned_cols=257 Identities=30% Similarity=0.453 Sum_probs=205.1
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCC--eEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE--FKALVL 467 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 467 (678)
..++...+.||+|+||+||++... +|...|||.+........+.+.+|++++++++|||||+++|...... .+++.|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 345777899999999999999854 59999999997664444677899999999999999999999854444 688999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-CCcEEEEeeccccccCC-C
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTR-E 545 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-~~~~kl~Dfg~~~~~~~-~ 545 (678)
||+++|+|.+++.+.+..+++..+..+.+||++||+||| ++||+|+||||+|||++. ++.+||+|||.+..... .
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 999999999999987756899999999999999999999 999999999999999999 79999999999987653 1
Q ss_pred CCcceeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
..........||+.|||||++..+. ...++||||+||++.||+||++||............. ...... |.
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i---g~~~~~-----P~- 243 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI---GREDSL-----PE- 243 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHH---hccCCC-----CC-
Confidence 1223344678999999999998643 3458999999999999999999997631111111110 000000 10
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
.+...+.++.+++.+|++.||++||||+|+++.--
T Consensus 244 ---------ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 244 ---------IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred ---------CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 11124556889999999999999999999997543
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=333.48 Aligned_cols=262 Identities=24% Similarity=0.323 Sum_probs=213.2
Q ss_pred hhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
..+.|++...||.|..++||+|+ ...++.||||++..+... ..+.+.+|++.|+.++||||++.+.+|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 34679999999999999999997 567899999999776433 3588899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 468 EYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 468 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
+||.+|++.++++.. ...+++..+..|.+++++||.||| .+|.||||||+.|||++.+|.|||+|||.+..+...+
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 999999999999754 346899999999999999999999 9999999999999999999999999999987776544
Q ss_pred Ccc-ee-ecccCCccccCccccCCC--CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 547 QST-IQ-TQTLATIGYMAPEYGKEG--RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 547 ~~~-~~-~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
... .. ....|++.|||||++... .|+.|+||||||++..||.+|..||....+..+.+... +.-+|...
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL-qn~pp~~~------ 253 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL-QNDPPTLL------ 253 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh-cCCCCCcc------
Confidence 221 11 456899999999995543 59999999999999999999999998755554433322 11111111
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....+.-....+...+.+++..|+++||++||||+++++
T Consensus 254 ----t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 254 ----TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ----cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 001111122334557899999999999999999999986
No 21
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-43 Score=366.83 Aligned_cols=255 Identities=24% Similarity=0.459 Sum_probs=221.3
Q ss_pred CCCCccccCCCceeEEEEEeC----CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
..+.+.||.|-||.||+|+++ ....||||.++.... ..+.+|..|+.+|.+++||||+++-|+.......+||+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 456789999999999999864 235699999987654 456789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC-C
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED-Q 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 547 (678)
||++|+|..|++.....+.+.+.+.|.++||.|+.||. ++++|||||.++|||++.+..+|++|||+++.+.+.. .
T Consensus 711 yMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~ 787 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 787 (996)
T ss_pred hhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCc
Confidence 99999999999998888999999999999999999999 9999999999999999999999999999999774432 3
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
......-..+.+|.|||.+...+++.++||||||++|||.++ |..||.++.+.+.-.. -
T Consensus 788 ~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka--------------------I 847 (996)
T KOG0196|consen 788 AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA--------------------I 847 (996)
T ss_pred cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHH--------------------H
Confidence 333444566789999999999999999999999999999998 9999987666543111 0
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
.+.++++.+.+|+..+.+||..||++|-.+||.+.|++..|.++-
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 233455566789999999999999999999999999999998773
No 22
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-42 Score=381.45 Aligned_cols=263 Identities=28% Similarity=0.472 Sum_probs=223.6
Q ss_pred hcCCCCCccccCCCceeEEEEEeC--CCc----EEEEEEeecc-cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG--DGM----EVAMKVFNLQ-YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFK 463 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~--~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 463 (678)
....+..+.||+|+||.||.|... +|. .||+|.++.. +.+...+|.+|..+|+.++|||||+++|++.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 455667789999999999999753 343 4899988654 345678999999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeec
Q 005760 464 ALVLEYMPHGSLEKYLHSS------NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg 537 (678)
++++|||++|||..|+++. ...+.......++.|||+|+.||+ ++++|||||.++|+|++....|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccc
Confidence 9999999999999999987 557889999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcc
Q 005760 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPIST 616 (678)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (678)
+|+..-+.+.+.......-+..|||||.+..+.++.|+|||||||++||++| |..||.+..+.+... .+.
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~-~~~-------- 918 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL-DVL-------- 918 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH-HHH--------
Confidence 9996665555555555577789999999999999999999999999999999 888987654433211 011
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHHhh
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLR 676 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~~~ 676 (678)
...++..+..|+..++++|..||+.+|++||++..+++++.++.+.+..
T Consensus 919 -----------~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 919 -----------EGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred -----------hCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 1113445567999999999999999999999999999999998876543
No 23
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.5e-41 Score=352.75 Aligned_cols=261 Identities=23% Similarity=0.409 Sum_probs=205.8
Q ss_pred hhcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeecccC-chhhhHHHHHHHHHhC-CCccceeeeeeeecC-
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRNIIKVISSCSNE- 460 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~- 460 (678)
..++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 457899999999999999999963 2356899999864332 3346788999999999 899999999988764
Q ss_pred CeEEEEEEecCCCCHHHHhhhCC---------------------------------------------------------
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSN--------------------------------------------------------- 483 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 483 (678)
+..++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 46789999999999999987532
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccCCcc
Q 005760 484 ----YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIG 559 (678)
Q Consensus 484 ----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 559 (678)
..+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++...............++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 23667888999999999999999 99999999999999999999999999999976543322222334456788
Q ss_pred ccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHH
Q 005760 560 YMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQC 638 (678)
Q Consensus 560 y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (678)
|+|||.+.+..++.++|||||||++|||++ |..||......+. ....... ..... .+..+
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~~~-----------~~~~~-------~~~~~ 302 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQRLKD-----------GTRMR-------APENA 302 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHHHhc-----------CCCCC-------CCCCC
Confidence 999999998899999999999999999997 9999876332211 1111110 00000 01134
Q ss_pred HHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 639 VSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 639 ~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
++++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 5568899999999999999999999999998865
No 24
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=318.05 Aligned_cols=238 Identities=26% Similarity=0.342 Sum_probs=200.9
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
-++|+..+.||.|+||+|.+++.+ +|..+|+|+++.+. -...+....|..+++.+.||+++++++.+.+.+.+|+|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 357888999999999999999854 78999999997653 23456778899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||++||.|..++++.+. +++.++..++.||+.|++||| +++|++||+||+|||+|.+|.+||+|||+|+.+...
T Consensus 123 meyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred EeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence 999999999999998775 888999999999999999999 999999999999999999999999999999877422
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
....+|||.|+|||++....+..++|.|||||++|||+.|.+||.+..+... ....+. .++.-|
T Consensus 198 ----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i-Y~KI~~-------~~v~fP---- 261 (355)
T KOG0616|consen 198 ----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI-YEKILE-------GKVKFP---- 261 (355)
T ss_pred ----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH-HHHHHh-------CcccCC----
Confidence 3356799999999999999999999999999999999999999987544211 111111 111111
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCC
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRI 658 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 658 (678)
...+.++.+|++..++.|-.+|.
T Consensus 262 ---------~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 262 ---------SYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred ---------cccCHHHHHHHHHHHhhhhHhhh
Confidence 22445688999999999999883
No 25
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.6e-41 Score=340.12 Aligned_cols=251 Identities=25% Similarity=0.371 Sum_probs=204.6
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
..++|++++.||+|+||.||+|+- .+|..+|+|+++.. .....+.+..|-.+|...++|.||+++..|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 357899999999999999999974 58999999999754 23456778889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||++|||+.+++.+.+. +++..+..++.+.+-|++.+| +.|+|||||||+|+|||..|++||+|||+++-+...
T Consensus 219 iMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999987765 888899999999999999999 999999999999999999999999999998533210
Q ss_pred ----------------------CCc-----------------------ceeecccCCccccCccccCCCCCCccchHHHH
Q 005760 546 ----------------------DQS-----------------------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSF 580 (678)
Q Consensus 546 ----------------------~~~-----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl 580 (678)
+.. ......+|||-|+|||++.+..|+..+|.||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 000 00112469999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcccCCcc--chhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCC
Q 005760 581 GIMLMETFTRKKPTDEIFNGEM--TLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRI 658 (678)
Q Consensus 581 Gv~l~ell~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 658 (678)
||++|||+.|.+||.+..+.+. .+..|...+. ++....++.++.+||.+|+. ||++|.
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~-------------------fP~~~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK-------------------FPEEVDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc-------------------CCCcCcccHHHHHHHHHHhc-CHHHhc
Confidence 9999999999999987554322 1222221111 11112234678899999999 999998
Q ss_pred C---HHHHH
Q 005760 659 N---AKEIV 664 (678)
Q Consensus 659 s---~~ell 664 (678)
. ++||.
T Consensus 435 G~~G~~EIK 443 (550)
T KOG0605|consen 435 GSKGAEEIK 443 (550)
T ss_pred CcccHHHHh
Confidence 5 55554
No 26
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-41 Score=345.73 Aligned_cols=249 Identities=26% Similarity=0.368 Sum_probs=205.5
Q ss_pred HhhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecc----cC-chhhhHHHHHHHHHhCC-CccceeeeeeeecCC
Q 005760 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQ----YG-RVFKSFDVECEMMKSIR-HRNIIKVISSCSNEE 461 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 461 (678)
...++|.+.+.||+|+||.|+.|. ..+++.||+|++... .. ...+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345789999999999999999996 457899999977553 11 23456678999999999 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC-CcEEEEeecccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN-MVAHLSDFGIAK 540 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~-~~~kl~Dfg~~~ 540 (678)
..++||||+.+|+|.+++.. ..++.+..+..+++|+++|++||| ++||+||||||+||+++.+ +++||+|||++.
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 99999999999999999998 446888999999999999999999 9999999999999999999 999999999998
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCC-CC-ccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGR-VS-ANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 618 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (678)
... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||++......... ..+. +
T Consensus 170 ~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k-i~~~-------~ 239 (370)
T KOG0583|consen 170 ISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK-IRKG-------E 239 (370)
T ss_pred ccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH-HhcC-------C
Confidence 763 2233345678999999999999877 75 779999999999999999999987322211111 1110 1
Q ss_pred cccCccCCccchhhHHHHHH-HHHHHHHHhhccccCcCCCCCHHHHH
Q 005760 619 IVDPNLLSREDINFVAKEQC-VSFVFNVAMECTVESPEQRINAKEIV 664 (678)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~Rps~~ell 664 (678)
..-|. .. ++++..++.+|++.||.+|+++.|++
T Consensus 240 ~~~p~-------------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 240 FKIPS-------------YLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ccCCC-------------CcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 11111 12 45688999999999999999999998
No 27
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=351.17 Aligned_cols=259 Identities=28% Similarity=0.423 Sum_probs=213.7
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC--CC---cEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCC
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG--DG---MEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~--~~---~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 461 (678)
..++....++||+|+||.||+|.++ ++ ..||+|..+.. ......++.+|+++|+.++|||||+++|++....
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 3455666799999999999999753 23 22899998742 2456788999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
.+++|||+|.||+|.+++++.+..++..++..++.+.|.||+||| +++++||||.++|+|++.++.+||+|||+++.
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999999998877999999999999999999999 99999999999999999999999999999864
Q ss_pred cCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhh-hcccCCccccc
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWV-NDWLPISTKEI 619 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~ 619 (678)
-. ...........+..|+|||.+..+.|++++|||||||++||+++ |..||.+.... ....++ ....+..
T Consensus 312 ~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~~~~~r~~---- 383 (474)
T KOG0194|consen 312 GS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIVKNGYRMP---- 383 (474)
T ss_pred Cc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHHhcCccCC----
Confidence 32 12222224457889999999999999999999999999999999 88898774433 222222 2111111
Q ss_pred ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 620 VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.+...+.++..++.+||..+|++||+|.++.+.++.+...
T Consensus 384 --------------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 384 --------------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred --------------CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 1113466788999999999999999999999999998754
No 28
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=342.18 Aligned_cols=245 Identities=24% Similarity=0.434 Sum_probs=208.3
Q ss_pred CccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCHH
Q 005760 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLE 476 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 476 (678)
.+.+|.|+.|.||+|+. .++.||||+++... ..+|.-|++|+||||+.+.|+|...-.+|||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 67899999999999998 46889999875322 34788899999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccC
Q 005760 477 KYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556 (678)
Q Consensus 477 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 556 (678)
+.++..+. +.....+.|..+||.|+.||| .+.|||||||.-||||+.+..|||+|||-++..... ...-.+.|
T Consensus 201 ~VLka~~~-itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaG 273 (904)
T KOG4721|consen 201 EVLKAGRP-ITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAG 273 (904)
T ss_pred HHHhccCc-cCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhh
Confidence 99987764 778888999999999999999 999999999999999999999999999999876433 22346789
Q ss_pred CccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHH
Q 005760 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKE 636 (678)
Q Consensus 557 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (678)
|..|||||+++...+++|+|||||||+||||+||..||.+......- | -.......++.+.
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII---w----------------GVGsNsL~LpvPs 334 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII---W----------------GVGSNSLHLPVPS 334 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE---E----------------eccCCcccccCcc
Confidence 99999999999999999999999999999999999999764332111 0 0112233445566
Q ss_pred HHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHHh
Q 005760 637 QCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675 (678)
Q Consensus 637 ~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~~ 675 (678)
.|+..+.-|+++||+..|..||+|.+++..|.-+...+.
T Consensus 335 tcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell 373 (904)
T KOG4721|consen 335 TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELL 373 (904)
T ss_pred cCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence 789999999999999999999999999999876655443
No 29
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-40 Score=316.89 Aligned_cols=270 Identities=24% Similarity=0.305 Sum_probs=208.6
Q ss_pred HHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCc--hhhhHHHHHHHHHhCCCccceeeeeeee--cCCe
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISSCS--NEEF 462 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~ 462 (678)
++..+.|+..+.|++|.||.||+|+. ++++.||+|+++..... .--...+|+.++.+.+|||||.+-.+.. +-+.
T Consensus 72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence 33456788899999999999999985 47899999999765432 1233478999999999999999988764 4567
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
.|+|||||+. ||..++...+.++...++..++.|+++|++||| ++.|+|||+|++|+|+...|.+||+|||+|+.+
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhh
Confidence 9999999988 999999988888999999999999999999999 999999999999999999999999999999988
Q ss_pred CCCCCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhh-h--------ccc
Q 005760 543 TREDQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWV-N--------DWL 612 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~-~--------~~~ 612 (678)
+.. ....+..+.|.+|.|||++.+. .|+.+.|+||+||++.||+++++-|.+..+.+ ..+.+ + .|+
T Consensus 228 gsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d--Ql~~If~llGtPte~iwp 303 (419)
T KOG0663|consen 228 GSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID--QLDKIFKLLGTPSEAIWP 303 (419)
T ss_pred cCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH--HHHHHHHHhCCCccccCC
Confidence 754 3335677899999999988775 49999999999999999999999887643322 21111 1 111
Q ss_pred CCcccccccCccCCccchhhHHH----HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 613 PISTKEIVDPNLLSREDINFVAK----EQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.-.....+..............+ ...+..-++|+..++.+||.+|.||.|.++
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 11111111101111111111111 013366889999999999999999999875
No 30
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.9e-41 Score=344.43 Aligned_cols=247 Identities=26% Similarity=0.357 Sum_probs=207.7
Q ss_pred cCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
+-|.+++.||.|+-|.|-.|+ ..+|+.+|||++.... ......+.+|+-+|+.+.|||++++|+++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 457889999999999999997 4689999999996542 223466788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|-|.+++.+.+. +++..+.++++||+.|+.|+| ..+|+|||+||+|+|+|..+++||+|||+|..-. .
T Consensus 92 Eyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~---~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEV---P 164 (786)
T ss_pred EecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeeccc---C
Confidence 99999999999987765 777888899999999999999 9999999999999999999999999999997532 2
Q ss_pred cceeecccCCccccCccccCCCCC-CccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
...-...+|+++|.+||++++..| +.++||||+||+||.|+||+.||++ .+-...+....+
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-dNir~LLlKV~~----------------- 226 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-DNIRVLLLKVQR----------------- 226 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-ccHHHHHHHHHc-----------------
Confidence 334456789999999999999988 5789999999999999999999984 111111111111
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
..+..+.+.++++++|+.+|+..||++|.|++||.+.
T Consensus 227 ---G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 227 ---GVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ---CcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1222334567789999999999999999999999874
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.1e-40 Score=335.90 Aligned_cols=246 Identities=28% Similarity=0.424 Sum_probs=208.2
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++|.+.+.||+|.||+||+|+- .+.+.||+|.+.+... ...+.+.+|+++++.++||||+.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 5678889999999999999974 4789999999965432 345668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|+.| +|.+++...+. ++++.+..++.+++.||.||| +.+|.|||+||.||+++.+|.+|+||||+|+.+. ...
T Consensus 82 ~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~--~~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS--TNT 154 (808)
T ss_pred hhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcc--cCc
Confidence 9977 99999987664 999999999999999999999 9999999999999999999999999999998764 345
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
...+...|||.|||||+..++.|+..+|+||+||++|||++|++||... .+.+.++....+ +....
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d-------~v~~p-- 220 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKD-------PVKPP-- 220 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcC-------CCCCc--
Confidence 5677889999999999999999999999999999999999999999752 122222222111 11110
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+..+..++...+.+||.+|.+..+++.
T Consensus 221 -------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 221 -------STASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -------ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 134556889999999999999999999874
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-41 Score=331.66 Aligned_cols=249 Identities=28% Similarity=0.392 Sum_probs=209.5
Q ss_pred hcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
...|+..+.||+|.||.||+|. ..+++.||+|++..... ...+++.+|+.++..++++||.++|+.+..+..++++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 4567788999999999999997 55889999999987644 456889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|+.||++.+.++.... +++..+..+.++++.|+.||| .++.+|||||+.||++..+|.||++|||.+..+... .
T Consensus 92 y~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~--~ 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGNI-LDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT--V 165 (467)
T ss_pred HhcCcchhhhhccCCC-CccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeech--h
Confidence 9999999999987653 477778889999999999999 999999999999999999999999999999876533 3
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......+||+.|||||++....|+.|+||||||++.+||.+|.+|+....+.... .++...-....
T Consensus 166 ~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl--------------flIpk~~PP~L 231 (467)
T KOG0201|consen 166 KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL--------------FLIPKSAPPRL 231 (467)
T ss_pred hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE--------------EeccCCCCCcc
Confidence 3336788999999999999889999999999999999999999999775442211 11111111000
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. ..+++.+.+++..|+++||+.||+|.++++
T Consensus 232 ~------~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 232 D------GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred c------cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 0 135566899999999999999999999986
No 33
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-41 Score=304.86 Aligned_cols=263 Identities=22% Similarity=0.294 Sum_probs=213.5
Q ss_pred HHhhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecC-----C
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNE-----E 461 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~ 461 (678)
....++|++.+.+|+|||+.||.++ ..++..+|+|++.....+..+...+|++..++++|||+++++++...+ .
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 3456789999999999999999997 678999999999888777888899999999999999999999987433 3
Q ss_pred eEEEEEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEEcCCCCCCeeecCCCcEEEEee
Q 005760 462 FKALVLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQ--VIHCDLKPSNVLLDDNMVAHLSDF 536 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dl~~~Nill~~~~~~kl~Df 536 (678)
..|++++|...|+|.+.+.. .+..+++.+++.|+.+|++||++|| +.. ++||||||.||++++.+.+++.||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH---EKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh---ccCCcccccCCCcceeEecCCCceEEEec
Confidence 58999999999999998864 3447899999999999999999999 666 999999999999999999999999
Q ss_pred ccccccCCCCC-------cceeecccCCccccCccccC---CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhh
Q 005760 537 GIAKLLTREDQ-------STIQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKH 606 (678)
Q Consensus 537 g~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~ 606 (678)
|.++...-.-. -........|..|.|||.+. +...++++|||||||++|+|+.|..||+...+....+.-
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL 253 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL 253 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE
Confidence 99976532111 11123456899999999875 345789999999999999999999999876654433322
Q ss_pred hhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 607 WVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+. . ..+.++....+++.+.++++.|++.||.+||++.|++..+..+
T Consensus 254 Av~-----------n------~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 254 AVQ-----------N------AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred eee-----------c------cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111 0 0111112223667799999999999999999999999988765
No 34
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=330.79 Aligned_cols=247 Identities=21% Similarity=0.301 Sum_probs=199.9
Q ss_pred CccccCCCceeEEEEEeCCCcEEEEEEeecccCc---hhhhHHHHHHHHHhCCCccceeeeeeeec----CCeEEEEEEe
Q 005760 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIRHRNIIKVISSCSN----EEFKALVLEY 469 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~ 469 (678)
...||+|++|.||+|.. +|+.||||+++..... ..+.+.+|+.++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999998 6899999998654322 24677899999999999999999999866 3567899999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++|+|.+++.... .+++.....++.|++.|+.||| + .+++||||||+||+++.++.+||+|||++.......
T Consensus 104 ~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 99999999998764 4888999999999999999999 6 488999999999999999999999999987653221
Q ss_pred ceeecccCCccccCccccCC--CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 549 TIQTQTLATIGYMAPEYGKE--GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+. ......... .+.
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~-~~~i~~~~~--------~~~--- 242 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI-YDLIINKNN--------SLK--- 242 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhcCC--------CCC---
Confidence 23457889999999876 6789999999999999999999999976432111 111111000 000
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
.+..+++++.+++.+||+.||++|||++|+++.|+.++.
T Consensus 243 -------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 243 -------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 001345678999999999999999999999999998763
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.3e-39 Score=332.60 Aligned_cols=262 Identities=23% Similarity=0.423 Sum_probs=202.9
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-----------------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCcccee
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-----------------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~ 452 (678)
.++|++.+.||+|+||.||+|.++ ++..||+|++..... .....+.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 467889999999999999999743 234699999875432 23467889999999999999999
Q ss_pred eeeeeecCCeEEEEEEecCCCCHHHHhhhCC------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 005760 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSN------------------YILDIYQRLNIMIDVASALEYLHFGYSAQVI 514 (678)
Q Consensus 453 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~iv 514 (678)
+++++.+.+..++||||+++++|.+++.... ..+++..+..++.||+.|++||| +.+|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCcc
Confidence 9999999999999999999999999986432 23577888999999999999999 99999
Q ss_pred EcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc--CCC
Q 005760 515 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT--RKK 592 (678)
Q Consensus 515 H~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~--g~~ 592 (678)
||||||+||+++.++.+||+|||++................++..|+|||++.++.++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999976543333233344456788999999988889999999999999999987 556
Q ss_pred CCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 593 PTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 593 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
||......+ ....+............. ..+..++..+.+++.+||+.||++|||+.|+.+.|+
T Consensus 241 p~~~~~~~~--~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 241 PYGELTDEQ--VIENAGEFFRDQGRQVYL-----------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCcCCHHH--HHHHHHHHhhhccccccc-----------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 776532211 111111111000000000 001134567899999999999999999999998886
No 36
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-39 Score=343.92 Aligned_cols=259 Identities=24% Similarity=0.390 Sum_probs=204.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecCC
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEE 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 461 (678)
..++|++.+.||+|+||.||+|.+ .++..||+|+++... ....+.+.+|+++++.+ +||||+++++++.+.+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 355789999999999999999963 246689999986432 23446788999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCC----------------------------------------------------------
Q 005760 462 FKALVLEYMPHGSLEKYLHSSN---------------------------------------------------------- 483 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~---------------------------------------------------------- 483 (678)
..++||||+++|+|.++++...
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 9999999999999999986432
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 484 ----------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 484 ----------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
..+++..+..++.||+.|++||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 13677888999999999999999 99999999999999999999999999999976643322
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
........++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....++..... ...+
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~~~-----~~~~---- 339 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKEGYR-----MLSP---- 339 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHhCcc-----CCCC----
Confidence 222233445678999999999999999999999999999998 888886533221 11111111000 0000
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
...+.++.+++.+||+.||++||++.|+++.|++.
T Consensus 340 ---------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ---------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ---------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11245688999999999999999999999999863
No 37
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=339.83 Aligned_cols=243 Identities=24% Similarity=0.325 Sum_probs=202.2
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 464 (678)
.-++|.+.+.||+|.||.|++|..+ +++.+|||++++.. ....+..+.|.+++.... ||+++.++.+|+..+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4568999999999999999999854 78899999997652 345677788999988775 999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+||||+.||++..+.+. ..+++..+..++..|+.||.||| +++||+||||.+|||+|.+|++||+|||+++.--
T Consensus 446 fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m- 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM- 519 (694)
T ss_pred EEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccC-
Confidence 99999999995444443 34899999999999999999999 9999999999999999999999999999998542
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
......+..+||+.|+|||++.+..|+.++|.|||||+||||+.|+.||.+..+.+. ....+.+
T Consensus 520 -~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~-FdsI~~d-------------- 583 (694)
T KOG0694|consen 520 -GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV-FDSIVND-------------- 583 (694)
T ss_pred -CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHhcC--------------
Confidence 233455678999999999999999999999999999999999999999987444321 1111110
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 660 (678)
.. ..+..++.+..++|++++..+|++|..+
T Consensus 584 --~~----~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 --EV----RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --CC----CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 00 0122456678899999999999999966
No 38
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.1e-39 Score=342.52 Aligned_cols=260 Identities=24% Similarity=0.417 Sum_probs=205.5
Q ss_pred hhcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecCC
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEE 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 461 (678)
..++|++.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+++++.+ +||||+++++++.+.+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 456899999999999999999873 234579999996543 23346678899999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCC----------------------------------------------------------
Q 005760 462 FKALVLEYMPHGSLEKYLHSSN---------------------------------------------------------- 483 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~---------------------------------------------------------- 483 (678)
..++||||+++|+|.++++...
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999999986421
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 484 -----------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 484 -----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
..+++..+.+++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++............
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 13677888999999999999999 9999999999999999999999999999997654332222223
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIN 631 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (678)
...++..|+|||++.+..++.++|||||||++|||++ |+.||........ ......... ....+
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~~~~~~~~-----~~~~~--------- 337 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FYKMVKRGY-----QMSRP--------- 337 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HHHHHHccc-----CccCC---------
Confidence 3345678999999988899999999999999999997 9999876433221 111111000 00000
Q ss_pred hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 632 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 632 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
...++++.+++.+||+.||++||++.|+++.|+++.
T Consensus 338 ----~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 ----DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 112456889999999999999999999999999863
No 39
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-40 Score=298.87 Aligned_cols=248 Identities=26% Similarity=0.364 Sum_probs=208.7
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
-++|++++.||+|.||.||.|+. +++-.||+|++-.. ......++.+|+++-+.|+||||+++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 46899999999999999999984 57888999998432 334567788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 467 LEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
+||.++|.+...++..+ ..+++...+.++.|+|.|+.|+| .++|+||||||+|+|++..+..|++|||-+..-.
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999999998443 25888889999999999999999 9999999999999999999999999999986432
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
.......+||.-|.|||...+...+..+|+|++|++.||++.|.+||..... ........+ .++.+|.
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-~etYkrI~k-------~~~~~p~-- 243 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-SETYKRIRK-------VDLKFPS-- 243 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-HHHHHHHHH-------ccccCCc--
Confidence 3344567899999999999999999999999999999999999999987552 222222211 1122222
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
..+.++.+++.+|+.++|.+|.+..|+++.
T Consensus 244 -----------~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 244 -----------TISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -----------ccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 234558899999999999999999998864
No 40
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.9e-39 Score=325.38 Aligned_cols=256 Identities=21% Similarity=0.355 Sum_probs=205.2
Q ss_pred hcCCCCCccccCCCceeEEEEEeC----CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
.++|++.+.||+|+||.||+|.++ .+..||+|.++.... .....+.+|+.+++.++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888999999999999999742 467899999875432 334578899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||+++|+|.+++......+++..++.++.|++.|++||| +.+++||||||+||+++.++.++++|||.+......
T Consensus 84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 99999999999999876556899999999999999999999 999999999999999999999999999987643221
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
. ........++..|+|||.+.+..++.++|||||||++||+++ |..||......+ ....+.....
T Consensus 161 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~~~~~~~~----------- 226 (266)
T cd05064 161 A-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIKAVEDGFR----------- 226 (266)
T ss_pred c-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHHCCCC-----------
Confidence 1 111112335678999999998999999999999999999875 999986532211 1111110000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
...+..++..+.+++.+||+.+|++||++.|+.+.|+++
T Consensus 227 -------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 -------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 001123556688999999999999999999999998764
No 41
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=329.00 Aligned_cols=265 Identities=22% Similarity=0.423 Sum_probs=223.1
Q ss_pred hhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
+.+...+.++||+|-||.|.+.....+..||||.++.... ..+.+|..|+++|.+++||||+.++|+|..++.+++++|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 4556778899999999999999987789999999976643 456899999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCC-CHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSNYIL-DIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~-~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++|+|..|+..+..+. +.....+|+.||+.|++||. +.++||||+.+.|+|+|.++++||+|||+++.+-..+.
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCc
Confidence 999999999998875433 55677889999999999999 99999999999999999999999999999998777788
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc--CCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT--RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
+..++..+.+.+|||||.+.-++++.++|||+||+++||+++ ...||....... ..+-.....+...
T Consensus 693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~~~~~--------- 761 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFFRDQG--------- 761 (807)
T ss_pred eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhcCCCC---------
Confidence 888888999999999999999999999999999999999887 788887643321 1111111111111
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
...-+..+.-|+.+++++|.+||..|-++||+++++...|++.
T Consensus 762 --~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 --RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred --cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1112223456888999999999999999999999999988764
No 42
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-40 Score=315.85 Aligned_cols=271 Identities=24% Similarity=0.334 Sum_probs=232.9
Q ss_pred HHHHHhhcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeee
Q 005760 385 LELCRATDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSC 457 (678)
Q Consensus 385 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~ 457 (678)
.++.....+++....+.+|.||.||+|.+. +.+.|.+|.++.+..+ ....+..|..++..+.|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 345555677888889999999999999543 4566888888766544 346678899999999999999999987
Q ss_pred e-cCCeEEEEEEecCCCCHHHHhhhCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC
Q 005760 458 S-NEEFKALVLEYMPHGSLEKYLHSSN-------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM 529 (678)
Q Consensus 458 ~-~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~ 529 (678)
. +.+.+++++.+..-|+|..|++..+ ...+..+.+.++.|++.|++||| +++|||.||.++|+++|+..
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhhe
Confidence 4 4567889999999999999998322 24566788899999999999999 99999999999999999999
Q ss_pred cEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhh
Q 005760 530 VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWV 608 (678)
Q Consensus 530 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~ 608 (678)
+||++|=.+++.+.+.+.++.......+..||+||.+....|+.++|||||||+||||+| |+.|+.+.++.++. +++
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~--~yl 511 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME--HYL 511 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH--HHH
Confidence 999999999999999999999999999999999999999999999999999999999999 99999876554432 222
Q ss_pred hcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHHhhcC
Q 005760 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLRNV 678 (678)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~ 678 (678)
.+++++..+-+|+.+++.+|.-||..+|++||+++|++.-|++++.++.++|
T Consensus 512 ------------------kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~YV 563 (563)
T KOG1024|consen 512 ------------------KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTRYV 563 (563)
T ss_pred ------------------hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhhcC
Confidence 2344556667899999999999999999999999999999999999999986
No 43
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.4e-38 Score=325.36 Aligned_cols=269 Identities=19% Similarity=0.242 Sum_probs=202.8
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999865 68899999986542 2334667889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|++++.+..+.. ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++....... .
T Consensus 81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 155 (287)
T cd07848 81 YVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS-N 155 (287)
T ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc-c
Confidence 999876655443 3345889999999999999999999 9999999999999999999999999999997654222 1
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccc--hhhhh--------hcccCCc-cc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMT--LKHWV--------NDWLPIS-TK 617 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~--~~~~~--------~~~~~~~-~~ 617 (678)
.......+++.|+|||++.+..++.++||||+||++|||++|+.||......+.. ..... ..+.... ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 1223456899999999998888999999999999999999999999763321110 00000 0000000 00
Q ss_pred ccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 618 EIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....+................+.++.+++.+||++||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000011111111111111235677999999999999999999999875
No 44
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=312.92 Aligned_cols=269 Identities=26% Similarity=0.304 Sum_probs=205.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeec--ccCchhhhHHHHHHHHHhCCCccceeeeeeeec-----CC
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN-----EE 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~ 461 (678)
....|...+.||.|+||.|+.|.. .+|+.||+|++.. ......++..+|+.+++.++|+||+.+++.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 455666689999999999999975 4899999999863 333456778899999999999999999998754 45
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
..|+|+|+| +.+|...++.+.. ++..++..++.|+++|+.|+| +.+|+|||+||.|++++.+...||+|||+|+.
T Consensus 100 DvYiV~elM-etDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceee
Confidence 789999999 5599999987754 899999999999999999999 99999999999999999999999999999998
Q ss_pred cCCCCCcceeecccCCccccCccccC-CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccc---
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGK-EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK--- 617 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 617 (678)
..........+.++.|.+|.|||++. ...|+.+.||||.||++.||++|++-|.+...- .....+-...+.+..
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v--~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV--HQLQLILELLGTPSEEDL 252 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH--HHHHHHHHhcCCCCHHHH
Confidence 75443344457788999999999765 457999999999999999999999988763221 111111111111100
Q ss_pred -ccc-------cCccCCccchhhHH-HHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 618 -EIV-------DPNLLSREDINFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 618 -~~~-------~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+- -.++.......+.. -....+.+.+|+.+||..||.+|+|++|+++
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 00000011111110 1256777999999999999999999999986
No 45
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-38 Score=308.80 Aligned_cols=268 Identities=25% Similarity=0.343 Sum_probs=204.0
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCc--hhhhHHHHHHHHHhCCCcc-ceeeeeeeecCC------
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRN-IIKVISSCSNEE------ 461 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------ 461 (678)
..|...++||+|.||+||+|+. .+|+.||+|+++....+ ......+|+.+++.++|+| |+++++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 4466678899999999999974 58899999999876442 4456689999999999999 999999997766
Q ss_pred eEEEEEEecCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSN---YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 538 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~ 538 (678)
..++|+||++. +|..++.... ...+...+..++.||+.|++||| +++|+||||||.||+++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 88999999955 9999998766 35777889999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhh--------h
Q 005760 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWV--------N 609 (678)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~--------~ 609 (678)
|+.+.-+ ....+..++|.+|.|||++.+. .|+...||||+||+++||++++.-|.+..+.+ .+.... .
T Consensus 167 Ara~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 167 ARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNEK 243 (323)
T ss_pred HHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCcc
Confidence 9866422 2235677899999999998887 68999999999999999999998887643311 111111 1
Q ss_pred cccCCcccccccCccCCccchhhHHH--HHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 610 DWLPISTKEIVDPNLLSREDINFVAK--EQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.|+......-.++............. ..-.++..+++.+|++++|.+|.|++.+++.
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11111100000100000000000011 1112468899999999999999999999885
No 46
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.1e-38 Score=323.84 Aligned_cols=265 Identities=20% Similarity=0.283 Sum_probs=201.5
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|++.+.||+|+||.||+|..+ +++.||+|+++.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 57899999999999999999754 789999999865432 2345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++ +|.+++......++...+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++....... .
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~--~ 158 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT--K 158 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--c
Confidence 975 999998776666888999999999999999999 9999999999999999999999999999987543221 1
Q ss_pred eeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcc---cCCcccc-------
Q 005760 550 IQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW---LPISTKE------- 618 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~------- 618 (678)
......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+. ........ .+.....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccccchhh
Confidence 2234567899999998765 4588999999999999999999999975332211 11111000 0000000
Q ss_pred --cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 619 --IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 619 --~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+....... .......+.++.+++.+|+++||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~--~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 238 RSYLFPQYRAQPL--INHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hccccCccCCCch--HHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 01111000000 0001124566889999999999999999999975
No 47
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.3e-38 Score=326.10 Aligned_cols=269 Identities=22% Similarity=0.327 Sum_probs=202.2
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999865 789999999865432 223456789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|++ ++|.+++......++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...... .
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP--S 157 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC--C
Confidence 995 6888888776666888999999999999999999 999999999999999999999999999998754322 1
Q ss_pred ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhc--------ccCCccccc
Q 005760 549 TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVND--------WLPISTKEI 619 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 619 (678)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.+.......+...... +........
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 22234568899999998765 457889999999999999999999997643221111111110 000000000
Q ss_pred ccCccC---Cccch-hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 VDPNLL---SREDI-NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ~~~~~~---~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.++... ..... ........+.++.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 011000 00000 00111123456889999999999999999999986
No 48
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.8e-38 Score=336.55 Aligned_cols=260 Identities=23% Similarity=0.394 Sum_probs=206.7
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCC-CccceeeeeeeecCC
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIR-HRNIIKVISSCSNEE 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 461 (678)
..++|.+.+.||+|+||.||+|... .+..||||++..... ...+.+..|+++++.+. ||||+++++++.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 4678999999999999999999742 234699999965432 33467889999999996 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCC----------------------------------------------------------
Q 005760 462 FKALVLEYMPHGSLEKYLHSSN---------------------------------------------------------- 483 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~---------------------------------------------------------- 483 (678)
..++||||+++|+|.++++...
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999999999999886431
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec
Q 005760 484 -------------------------------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD 526 (678)
Q Consensus 484 -------------------------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~ 526 (678)
..+++..+..++.|++.|++||| +.+|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEe
Confidence 13667788899999999999999 99999999999999999
Q ss_pred CCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchh
Q 005760 527 DNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLK 605 (678)
Q Consensus 527 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~ 605 (678)
.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||..........
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~- 350 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY- 350 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH-
Confidence 999999999999976543322222334456788999999988889999999999999999997 899987543221111
Q ss_pred hhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 606 HWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
..+.... .+ ..+..++.++.+++.+||+.||++||++.++.+.|+++.
T Consensus 351 ~~~~~~~--------~~----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 351 NKIKSGY--------RM----------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHhcCC--------CC----------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1111000 00 011234567899999999999999999999999999864
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.8e-38 Score=323.84 Aligned_cols=250 Identities=20% Similarity=0.274 Sum_probs=199.9
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.|+..+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+|+++++.++|++|+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367789999999999999975 579999999986432 2223457789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++|+|.+++.... ..+++..+..++.|++.|++||| +++|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 999999998876433 35889999999999999999999 9999999999999999999999999999997653221
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......|+..|+|||++.+..++.++||||+||++|||++|+.||........ ......... .... .
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~-~~~~------~--- 223 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEVDRRVK-EDQE------E--- 223 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHHHHHhh-cccc------c---
Confidence 22345689999999999999999999999999999999999999976432211 011100000 0000 0
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRIN-----AKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~ell~ 665 (678)
.+...+.++.+|+.+||+.||++||+ ++|+++
T Consensus 224 ------~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 224 ------YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ------CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 01123556889999999999999997 788876
No 50
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.4e-39 Score=312.52 Aligned_cols=252 Identities=25% Similarity=0.351 Sum_probs=204.2
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
+.|+..+.||.|.-|+||+++.+ ++..+|+|++.... .....+...|.+||+.++||.++.+|+.|+.++..|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 45677899999999999999865 56899999997653 234456677999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 468 EYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+||+|...++++. ..+++..+..++.+++-||+||| ..|||+|||||+|||+.++|++.++||.++.......
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999999998764 36899999999999999999999 9999999999999999999999999999975432100
Q ss_pred ------------------------------------------------------CcceeecccCCccccCccccCCCCCC
Q 005760 547 ------------------------------------------------------QSTIQTQTLATIGYMAPEYGKEGRVS 572 (678)
Q Consensus 547 ------------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~ 572 (678)
........+||-.|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 00112345799999999999999999
Q ss_pred ccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhcccc
Q 005760 573 ANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVE 652 (678)
Q Consensus 573 ~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 652 (678)
.++|+|+|||++|||+.|..||-+.... .++...+.. . ..++.....+..+.+||++.|.+
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~-~Tl~NIv~~------------~------l~Fp~~~~vs~~akDLIr~LLvK 374 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNK-ETLRNIVGQ------------P------LKFPEEPEVSSAAKDLIRKLLVK 374 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCch-hhHHHHhcC------------C------CcCCCCCcchhHHHHHHHHHhcc
Confidence 9999999999999999999999874432 233222211 0 11111113455688999999999
Q ss_pred CcCCCCC----HHHHHH
Q 005760 653 SPEQRIN----AKEIVT 665 (678)
Q Consensus 653 dP~~Rps----~~ell~ 665 (678)
||.+|.. |+||.+
T Consensus 375 dP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 375 DPSKRLGSKRGAAEIKR 391 (459)
T ss_pred ChhhhhccccchHHhhc
Confidence 9999998 777754
No 51
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.3e-38 Score=324.84 Aligned_cols=256 Identities=29% Similarity=0.529 Sum_probs=207.2
Q ss_pred cCCCCCccccCCCceeEEEEEeCC------CcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLGD------GMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
++|++.+.||+|+||.||+|.... ...||+|.+..... .....+.+|+++++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999997532 25799999864432 34466889999999999999999999999988999
Q ss_pred EEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC
Q 005760 465 LVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM 529 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~ 529 (678)
++|||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence 9999999999999997542 34778889999999999999999 99999999999999999999
Q ss_pred cEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhh
Q 005760 530 VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWV 608 (678)
Q Consensus 530 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~ 608 (678)
.++|+|||++................+++.|+|||.+.++.++.++|||||||++|||++ |..||.+....+ ....+
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--~~~~i 239 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--VIEMI 239 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence 999999999976543333333445567889999999988899999999999999999998 999987633321 11111
Q ss_pred hcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.... .. ..+..++.++.+++.+||+.||.+||+++|+++.|+++
T Consensus 240 ~~~~------------~~------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 RSRQ------------LL------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HcCC------------cC------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1000 00 01234667799999999999999999999999999863
No 52
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.8e-39 Score=326.15 Aligned_cols=249 Identities=34% Similarity=0.560 Sum_probs=195.3
Q ss_pred CCccccCCCceeEEEEEeC-----CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 396 ENNLIGRGSFGSVFKARLG-----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 396 ~~~~ig~G~~g~V~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+.+.||.|.||.||+|.+. .+..|+||.++.... +..+.+.+|++.++.++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999864 367799999965433 3468899999999999999999999999988889999999
Q ss_pred cCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++|+|.+++... ...+++..+..|+.||++||+||| +++++|+||+++||+++.++.+||+|||++.........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999887 556899999999999999999999 899999999999999999999999999999876333333
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
...........|+|||.+.+..++.++||||||+++||+++ |+.||.+.... .....+.... .
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--~~~~~~~~~~-----~--------- 223 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--EIIEKLKQGQ-----R--------- 223 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--HHHHHHHTTE-----E---------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccc-----c---------
Confidence 33444567789999999999889999999999999999999 67887653221 1111111000 0
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
...+..++..+.+++.+||..||++||++.|++++|
T Consensus 224 ----~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ----LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 000112455688999999999999999999999986
No 53
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.7e-38 Score=326.00 Aligned_cols=266 Identities=22% Similarity=0.327 Sum_probs=204.4
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.++|++.+.||+|+||.||+|+.. +|..+|+|++..... ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 468999999999999999999854 788999999875432 345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSA-QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++++|.+++.... .+++..+..++.|++.|+.||| +. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999997655 4888999999999999999999 64 6999999999999999999999999998755322
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc--------------C
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL--------------P 613 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~--------------~ 613 (678)
......++..|+|||.+.+..++.++|||||||++|||++|+.||......+ +........ +
T Consensus 158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCccc
Confidence 1234568999999999998899999999999999999999999996432211 111100000 0
Q ss_pred CcccccccCccC-Cccc---hhhH-----------HHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 614 ISTKEIVDPNLL-SRED---INFV-----------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 614 ~~~~~~~~~~~~-~~~~---~~~~-----------~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
............ .... .+.. ....++.++.+++.+||++||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000000 0000 0000 001246679999999999999999999999875
No 54
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.8e-38 Score=324.44 Aligned_cols=260 Identities=28% Similarity=0.498 Sum_probs=209.4
Q ss_pred hcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
.++|.+.+.||+|+||.||++.. .++..+|+|.+........+.+.+|+++++.++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 45788999999999999999974 234568999987554445667899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEE
Q 005760 465 LVLEYMPHGSLEKYLHSSN------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAH 532 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~k 532 (678)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +++++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEE
Confidence 9999999999999997543 24889999999999999999999 99999999999999999999999
Q ss_pred EEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcc
Q 005760 533 LSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDW 611 (678)
Q Consensus 533 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~ 611 (678)
++|||++................++..|+|||.+.+..++.++|||||||++|||++ |..||......+ .........
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~~~i~~~~ 239 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECITQGR 239 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCC
Confidence 999999976543322222334446778999999988889999999999999999998 888886533221 111111100
Q ss_pred cCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 612 LPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.. . .+ ..++.++.+++.+||+.||.+|||+.|+.+.|+++.+.
T Consensus 240 ~~----~--~~-------------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 240 VL----Q--RP-------------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred cC----C--CC-------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 00 0 00 11345588999999999999999999999999999764
No 55
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-39 Score=326.62 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=217.8
Q ss_pred CCCCCccccCCCceeEEEEEeC---CC--cEEEEEEeecc-cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG---DG--MEVAMKVFNLQ-YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~---~~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
.....++||+|.||.||+|.+. .| -.||||.-+.+ .....+.|..|..+|+.++||||++++|+|.+. ..++|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wiv 468 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIV 468 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEE
Confidence 3445678999999999999742 23 45899988764 345678899999999999999999999999875 46899
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
||.++.|.|.+|++.....++.....-++.||+.+|+||| ++++|||||.++|||+.....||++|||+++.+....
T Consensus 469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 9999999999999999888999999999999999999999 9999999999999999999999999999999876544
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
.+ ..+...-+..|||||-+.-.+++.++|||-|||.+||++. |..||.+..+.+.-. .
T Consensus 546 yY-kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~--------------------~ 604 (974)
T KOG4257|consen 546 YY-KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG--------------------H 604 (974)
T ss_pred hh-hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE--------------------E
Confidence 33 3445667889999999999999999999999999999998 999998755443211 1
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
-..+.+++.+++|++.++.+|.+||.+||.+||.+.|+...|+.+..
T Consensus 605 iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 605 IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 12233455667899999999999999999999999999999999875
No 56
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-38 Score=319.31 Aligned_cols=252 Identities=25% Similarity=0.407 Sum_probs=203.4
Q ss_pred cCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
++|++.+.||+|+||.||+|.++++..+|+|.+... ....+.+..|+.+++.++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457888999999999999999888889999987643 2234678889999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+|+|.++++.....+++..+..++.|++.|++||| +++++|+||+|+||+++.++.+|++|||.++...... ....
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~-~~~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE-YTSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCc-eecc
Confidence 99999999865556889999999999999999999 9999999999999999999999999999987653222 1112
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.... ....+.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~i~~~~-----~~~~~~------- 224 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEMISRGF-----RLYRPK------- 224 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCC-----CCCCCC-------
Confidence 23345678999999988889999999999999999999 88898653221 1111111000 001111
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
..+.++.+++.+||+.+|++||++.|+++.|.
T Consensus 225 ------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 ------LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ------CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12345889999999999999999999999873
No 57
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-39 Score=328.79 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=212.2
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCe-EEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF-KALV 466 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv 466 (678)
.++|..++.+|+|+||.++.++.+ ++..+|+|.+.... ........+|+.++++++|||||.+.+.+.+.+. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357888999999999999999754 67889999986543 3445577889999999999999999999998888 9999
Q ss_pred EEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 467 LEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
|+|++||++.+.+.+.+ ..+++.++..|+.|++.|+.||| +++|+|||||+.||+++.++.|||+|||+|+.+.+.
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 99999999999998766 57899999999999999999999 999999999999999999999999999999988654
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
. .......||+.|+.||++.+..|..|+||||+||++|||++-+++|.+........ ...+.. .
T Consensus 160 ~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~-ki~~~~--------~----- 223 (426)
T KOG0589|consen 160 D--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELIL-KINRGL--------Y----- 223 (426)
T ss_pred h--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHH-HHhhcc--------C-----
Confidence 3 23456789999999999999999999999999999999999999997643322111 111110 0
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.+.+..++.++..+++.|++.+|+.||++.+++.+
T Consensus 224 ------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 ------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11123456778999999999999999999999987
No 58
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=329.51 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=216.0
Q ss_pred hcCCCCCccccCCCceeEEEEEeCC-CcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..+....++||.|.||.||.|.|+. ..-||||.++.+. ...++|..|+.+|+.++|||+|+++|+|..+-..|||+||
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEf 344 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEF 344 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEec
Confidence 3455677899999999999999874 5669999997654 3468899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|.+|+|.+|++.... .++.-..+.|+.||.+|++||. ++++|||||.++|+|+.++..||+.|||+++.+.. +++
T Consensus 345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg-DTY 420 (1157)
T KOG4278|consen 345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG-DTY 420 (1157)
T ss_pred ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcC-Cce
Confidence 999999999987643 4666777899999999999999 99999999999999999999999999999998864 344
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.......-+..|.|||-+....++.|+|||+|||+|||+.| |..||.+.... +... . -.
T Consensus 421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-----qVY~-L--------------LE 480 (1157)
T KOG4278|consen 421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYG-L--------------LE 480 (1157)
T ss_pred ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-----HHHH-H--------------Hh
Confidence 44455667889999999999999999999999999999999 88888764322 1110 0 01
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
..++...++.|++.+++||+.||+++|.+||++.|+-+.++.+-
T Consensus 481 kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 481 KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 12233345679999999999999999999999999999999874
No 59
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.3e-38 Score=329.83 Aligned_cols=259 Identities=23% Similarity=0.385 Sum_probs=206.5
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCc----EEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGM----EVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
..+|+..+.||+|+||.||+|.+. +++ .||+|++.... ....+.+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 356899999999999999999753 343 48999986432 23456788999999999999999999998765 467
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+|+||+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 85 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 999999999999999887667889999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 623 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (678)
............+..|+|||.+.+..++.++|||||||++|||++ |..||.+.... .......... ...
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~-----~~~--- 231 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGE-----RLP--- 231 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCCC-----CCC---
Confidence 333222233445678999999999999999999999999999998 99998653221 1111111000 000
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 624 LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.+..++.++.+++.+||+.+|++||++.|++..+..+...
T Consensus 232 ----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 232 ----------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred ----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 0012345588999999999999999999999999888654
No 60
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.2e-39 Score=327.65 Aligned_cols=245 Identities=25% Similarity=0.340 Sum_probs=199.9
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46889999999999999999864 78999999986532 223456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++++|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence 9999999999998665 4888899999999999999999 999999999999999999999999999998765321
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.. .. ..-+
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--~~~~i~~---~~---~~~~----- 218 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--IYEKILA---GK---LEFP----- 218 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh---CC---cCCC-----
Confidence 123468999999999998889999999999999999999999987532211 1111100 00 0000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCC-----HHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRIN-----AKEIVTK 666 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~ell~~ 666 (678)
...+..+.+++.+||+.||.+||+ ++|+++.
T Consensus 219 --------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 219 --------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred --------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 112445789999999999999995 8887753
No 61
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=317.80 Aligned_cols=258 Identities=26% Similarity=0.356 Sum_probs=199.6
Q ss_pred HHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--------------chhhhHHHHHHHHHhCCCccce
Q 005760 387 LCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--------------RVFKSFDVECEMMKSIRHRNII 451 (678)
Q Consensus 387 ~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv 451 (678)
-...-++|++.+.||+|.||.|-+|+. .+++.||||++..... ...+...+|+.+|++++|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 344568899999999999999999985 4899999999954311 1235788999999999999999
Q ss_pred eeeeeeec--CCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC
Q 005760 452 KVISSCSN--EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM 529 (678)
Q Consensus 452 ~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~ 529 (678)
+++.+..+ .+.+|+|+|||..|.+...=.... .++..+++.++++++.||+||| .+||+||||||+|+|++++|
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~-els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP-ELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCCCCcc-cccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCC
Confidence 99999866 468999999999887643322221 2788999999999999999999 99999999999999999999
Q ss_pred cEEEEeeccccccCCC---CCcceeecccCCccccCccccCCCC----CCccchHHHHHHHHHHHHcCCCCCCcccCCcc
Q 005760 530 VAHLSDFGIAKLLTRE---DQSTIQTQTLATIGYMAPEYGKEGR----VSANGDVYSFGIMLMETFTRKKPTDEIFNGEM 602 (678)
Q Consensus 530 ~~kl~Dfg~~~~~~~~---~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~ 602 (678)
+|||+|||.+...... +....-....|||.|+|||...++. .+.+.||||+||+||.|+.|+.||-+.+..+
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~- 326 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE- 326 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH-
Confidence 9999999999765221 1122233478999999999887743 3567899999999999999999986533221
Q ss_pred chhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 603 TLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
+-+ .++...+ .++...+..+++.+|+.+||++||++|.+..+|....
T Consensus 327 -l~~-----------KIvn~pL------~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 327 -LFD-----------KIVNDPL------EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred -HHH-----------HHhcCcc------cCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 111 1111111 1112223456689999999999999999999987543
No 62
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.1e-38 Score=318.90 Aligned_cols=257 Identities=26% Similarity=0.450 Sum_probs=207.8
Q ss_pred hcCCCCCccccCCCceeEEEEEeC----CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
.++|++.+.||+|+||.||+|.++ +...||+|.+.... ......+..|+.+++.++||||+++++++.+.+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 357889999999999999999864 24679999986543 2345678889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||+++++|.+++......+++..+..++.|++.|++||| +++|+|+||+|+||++++++.++++|||++......
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999876667899999999999999999999 999999999999999999999999999999876522
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
..........++..|+|||...+..++.++||||||+++|||++ |..||...... .....+.... ..+
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~-------~~~-- 228 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGY-------RLP-- 228 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC-------CCC--
Confidence 22222223345678999999998899999999999999999998 99998653221 1111111000 000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 229 ---------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 ---------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0112455688999999999999999999999999875
No 63
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=9.7e-39 Score=321.65 Aligned_cols=257 Identities=27% Similarity=0.506 Sum_probs=210.8
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++..+|++.+.||.|+||.||+|...++..+|+|++..........+..|+++++.++||||+++++++.+.+..++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34567899999999999999999988899999999976655456778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++++|.++++... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.+|++|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~- 158 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV- 158 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc-
Confidence 999999999997643 35789999999999999999999 9999999999999999999999999999997654321
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
.......++..|+|||...++.++.++||||||+++|+|++ |+.||......+ .......... ..
T Consensus 159 -~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~-~~~~~~~~~~------~~------ 224 (261)
T cd05148 159 -YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE-VYDQITAGYR------MP------ 224 (261)
T ss_pred -ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHHHHhCCc------CC------
Confidence 11223446778999999988889999999999999999998 889986533211 1111111000 00
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+..+++.+.+++.+||+.||++|||+.++++.|+++
T Consensus 225 -------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 225 -------CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0112345688999999999999999999999999863
No 64
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=302.04 Aligned_cols=251 Identities=23% Similarity=0.345 Sum_probs=205.0
Q ss_pred hcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++.|++-+.||+|.|+.||+.. ..+|+.+|+|++... .....+.+.+|+++-+.|+||||+++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 4677888899999999999985 458999999988543 3446788899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec---CCCcEEEEeeccccccCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~---~~~~~kl~Dfg~~~~~~~ 544 (678)
|++.|++|..-+-.. ...++..+..+++||++++.|+| .++|||||+||+|+++. ...-+|++|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~- 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN- 164 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence 999999997554333 34788888999999999999999 99999999999999994 45578999999999886
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
.........|||+|||||+++..+|+-.+|||+.||+||-++.|.+||.+.+..+ ...+.....+.
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r-lye~I~~g~yd----------- 230 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYEQIKAGAYD----------- 230 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH-HHHHHhccccC-----------
Confidence 3344567889999999999999999999999999999999999999998733321 11222221111
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+.......+++..+|+++|+..||.+|.|+.|+++
T Consensus 231 -----~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 231 -----YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -----CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 111112234566889999999999999999999875
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2e-38 Score=330.98 Aligned_cols=253 Identities=22% Similarity=0.333 Sum_probs=204.0
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+..|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46889999999999999999865 68999999997542 233466788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++++|.+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 9999999999997654 4788899999999999999999 99999999999999999999999999999975432
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......|++.|+|||++.+..++.++||||+||++|||++|..||......+. . ..+..+.. ....+.....
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~-~~i~~~~~----~~~~~~~~~~ 225 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-W-ENLKYWKE----TLQRPVYDDP 225 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-H-HHHHhccc----cccCCCCCcc
Confidence 22345689999999999998999999999999999999999999975322111 1 11111100 0000110000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
....+.++.+++.+||+.+|.+||++.|+++.
T Consensus 226 -------~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 226 -------RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -------ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 01245668899999999999999999999864
No 66
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=314.86 Aligned_cols=260 Identities=25% Similarity=0.337 Sum_probs=195.9
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecC---C--eEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNE---E--FKALV 466 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---~--~~~lv 466 (678)
.|...+.+|.|+||.||+|.. .+++.||||+.-.+.+ --.+|+++|+.++|||||++..+|... + ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 466679999999999999985 4679999999854322 224699999999999999999887432 2 33489
Q ss_pred EEecCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC-CcEEEEeecccccc
Q 005760 467 LEYMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLL 542 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~-~~~kl~Dfg~~~~~ 542 (678)
|||++. +|.++++.. +..++...+.-+..||.+|++||| +.+|+||||||.|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999977 999998742 345777888889999999999999 9999999999999999965 99999999999988
Q ss_pred CCCCCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc--CCccc--
Q 005760 543 TREDQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL--PISTK-- 617 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~-- 617 (678)
...... ..+..|..|.|||.+.+. .|+.+.||||.||++.||+-|++-|.+... ...+...++-.. .....
T Consensus 177 ~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 177 VKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred ccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCCHHHHhh
Confidence 654333 456788999999988775 599999999999999999999999877322 222233322111 00000
Q ss_pred ------ccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 618 ------EIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 618 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+...|......-.+ ......+++..+++.++++++|.+|.++.|++.
T Consensus 253 mn~~y~~~~~p~ik~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cCcccccccCccccccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11111111111111 122346788999999999999999999999985
No 67
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.4e-38 Score=330.43 Aligned_cols=241 Identities=24% Similarity=0.307 Sum_probs=195.6
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+.||+|+||.||+|.. .+|+.||+|+++... ......+..|+.+++.++||||+++++++...+..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999975 578999999997542 233456778999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeec
Q 005760 474 SLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553 (678)
Q Consensus 474 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 553 (678)
+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER-VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCcccc
Confidence 9999997655 4889999999999999999999 999999999999999999999999999998753221 112234
Q ss_pred ccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhH
Q 005760 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFV 633 (678)
Q Consensus 554 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (678)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+. .. ....
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~~---~~---~~~~------------ 214 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELIL---ME---EIRF------------ 214 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHHH---cC---CCCC------------
Confidence 56899999999999999999999999999999999999999652211 1111110 00 0000
Q ss_pred HHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 634 AKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 634 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
+...+.++.+++.+||+.||++|| ++.|+++
T Consensus 215 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 215 -PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 012345688999999999999999 7888875
No 68
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.3e-38 Score=328.93 Aligned_cols=261 Identities=25% Similarity=0.437 Sum_probs=205.1
Q ss_pred hhcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeecccC-chhhhHHHHHHHHHhC-CCccceeeeeeeec-C
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRNIIKVISSCSN-E 460 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~ 460 (678)
..++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+..|+++++++ +|+||+++++++.. .
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 346799999999999999999953 2357899999864332 2345677899999999 79999999998754 4
Q ss_pred CeEEEEEEecCCCCHHHHhhhCC---------------------------------------------------------
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSN--------------------------------------------------------- 483 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 483 (678)
...++++||+++++|.+++....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 57889999999999999986421
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccCCccc
Q 005760 484 ---YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGY 560 (678)
Q Consensus 484 ---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y 560 (678)
..+++..+..++.||+.|++||| +++|+||||||+||+++.++.++|+|||++..+.............++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 14788899999999999999999 999999999999999999999999999999876433322233344567789
Q ss_pred cCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHH
Q 005760 561 MAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCV 639 (678)
Q Consensus 561 ~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (678)
+|||++.+..++.++||||+||++|||++ |..||......+ ........... .. .+..++
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~-----~~-------------~~~~~~ 302 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGTR-----MR-------------APEYAT 302 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccCC-----CC-------------CCccCC
Confidence 99999999999999999999999999998 999986532221 11111110000 00 011234
Q ss_pred HHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 640 SFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 640 ~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
+++.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 568899999999999999999999999998764
No 69
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.4e-39 Score=310.54 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=206.8
Q ss_pred hcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
..+|++.+.||+|.||.|-+|+ .+.|+.||||.++... .+..-.+.+|+++|+.|+||||+.++.+|+..+.+.+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 3578888999999999999997 5789999999996543 34455678999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||..+|.|++|+...+. +++.....+++||.+|+.|+| +++++|||+|.+|||+|.++++||.|||++..+...
T Consensus 132 MEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~- 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK- 206 (668)
T ss_pred EEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccc-
Confidence 999999999999987764 899999999999999999999 999999999999999999999999999999876432
Q ss_pred CcceeecccCCccccCccccCCCCC-CccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
..-..++|++-|.+||+..+..| ++.+|-||+||+||-++.|..||++.+- .....+.-++.+. .|
T Consensus 207 --kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-k~lvrQIs~GaYr-------EP--- 273 (668)
T KOG0611|consen 207 --KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-KRLVRQISRGAYR-------EP--- 273 (668)
T ss_pred --cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-HHHHHHhhccccc-------CC---
Confidence 23346789999999999999988 5789999999999999999999987321 1111221111111 01
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
..+.++.-||++|+..+|++|-|+.++....
T Consensus 274 -----------~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 274 -----------ETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -----------CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 1233466799999999999999999987543
No 70
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4e-38 Score=317.17 Aligned_cols=256 Identities=29% Similarity=0.459 Sum_probs=206.7
Q ss_pred hhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..++|++.+.||+|++|.||+|...+++.||+|.++... ...+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 346788999999999999999998778889999986532 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.+++.... ..+++..+..++.|++.|+.||| +++++|+||||+||++++++.++|+|||+++...... .
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~ 158 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI-Y 158 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc-c
Confidence 99999999997643 45889999999999999999999 9999999999999999999999999999998764221 1
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
........+..|+|||+..+..++.++||||||+++|||++ |+.||.+..... ....+..... . +
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~-----~--~----- 224 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--VLQQVDQGYR-----M--P----- 224 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHcCCC-----C--C-----
Confidence 11122233467999999998899999999999999999999 999986532211 1111110000 0 0
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 225 ------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 225 ------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0012345688999999999999999999999999863
No 71
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.8e-38 Score=321.79 Aligned_cols=255 Identities=31% Similarity=0.509 Sum_probs=205.0
Q ss_pred hcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFK 463 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 463 (678)
.++|.+.+.||+|+||.||+|... ++..||+|.+...... ..+.+.+|+++++.++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 356888899999999999999753 3578999998654333 457889999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCc
Q 005760 464 ALVLEYMPHGSLEKYLHSSN-------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMV 530 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~ 530 (678)
++||||+++++|.++++..+ ..+++..+..++.|++.|+.||| +++++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCe
Confidence 99999999999999997542 24678889999999999999999 999999999999999999999
Q ss_pred EEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhh
Q 005760 531 AHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 531 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~ 609 (678)
+|++|||++................+++.|+|||++.++.++.++||||+||++|||++ |..||......+ ....+.
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~~~~~~ 238 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--VIECIT 238 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHH
Confidence 99999999876533222222334456788999999999999999999999999999998 999986532211 111111
Q ss_pred cccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 610 DWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
. .... . .+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 239 ~---~~~~---------~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 Q---GRLL---------Q------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred c---CCcC---------C------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 0 0000 0 00123456889999999999999999999999886
No 72
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=331.91 Aligned_cols=245 Identities=22% Similarity=0.268 Sum_probs=199.9
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 357889999999999999999864 78999999986532 23346688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 99999999999998765 4788888999999999999999 9999999999999999999999999999997653221
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
....|++.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+. .. ...-|.
T Consensus 173 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~---~~---~~~~p~--- 236 (329)
T PTZ00263 173 -----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--RIYEKIL---AG---RLKFPN--- 236 (329)
T ss_pred -----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--HHHHHHh---cC---CcCCCC---
Confidence 2346899999999999988999999999999999999999998653211 1111100 00 000011
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRIN-----AKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~ell~ 665 (678)
.++.++.+++.+||+.||.+||+ ++|+++
T Consensus 237 ----------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 237 ----------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ----------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 12345789999999999999997 677764
No 73
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.1e-38 Score=314.63 Aligned_cols=248 Identities=27% Similarity=0.448 Sum_probs=197.9
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
+.||+|+||.||+|.. .+++.||+|.+.... .+....+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999986 478999999876432 23456788999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeeccc
Q 005760 476 EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555 (678)
Q Consensus 476 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 555 (678)
.+++......+++..+..++.|++.||+||| +++++||||+|+||+++.++.+|++|||++................
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 9999876656889999999999999999999 9999999999999999999999999999987543221111111223
Q ss_pred CCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHH
Q 005760 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVA 634 (678)
Q Consensus 556 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (678)
.+..|+|||.+.++.++.++||||+||++|||++ |..||....... ....+....+ . ..
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~~~~~~~~--------~----------~~ 217 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TREAIEQGVR--------L----------PC 217 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCC--------C----------CC
Confidence 3567999999998889999999999999999998 888886432211 1111110000 0 00
Q ss_pred HHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 635 KEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 635 ~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
+..++..+.+++.+||+.+|++||++.|+.++|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1123556889999999999999999999999886
No 74
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.9e-38 Score=318.16 Aligned_cols=255 Identities=24% Similarity=0.415 Sum_probs=206.7
Q ss_pred hcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
.++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.+++.++|+||+++++++.+.+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 46788999999999999999998888899999976432 23567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++++|.++++.. ....++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||++........ .
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 159 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-T 159 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce-e
Confidence 999999999754 345788899999999999999999 89999999999999999999999999999986543221 1
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......++..|+|||...++.++.++|||||||++|+|++ |+.||...... .....+.... ...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~--------~~~----- 224 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGY--------RMP----- 224 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC--------CCC-----
Confidence 1223345678999999988889999999999999999998 89998653221 1111111100 000
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
....++.++.+++.+||..+|++||+++++.+.|+++
T Consensus 225 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 225 -----RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -----CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0012345588999999999999999999999999863
No 75
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.1e-38 Score=321.62 Aligned_cols=259 Identities=30% Similarity=0.496 Sum_probs=208.9
Q ss_pred cCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
.+|.+.+.||+|+||.||+|.. .++..+++|.+........+.+.+|+++++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 4577889999999999999973 2456689999875555555778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCc
Q 005760 466 VLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMV 530 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~ 530 (678)
||||+++++|.+++.... ..+++..++.++.|++.|++||| +++++||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 999999999999997542 24788999999999999999999 999999999999999999999
Q ss_pred EEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhh
Q 005760 531 AHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 531 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~ 609 (678)
++++|||++................++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ .......
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~ 240 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VIECITQ 240 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHhC
Confidence 99999999976543322223344556788999999998899999999999999999999 999986532211 1111100
Q ss_pred cccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 610 DWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
...+ . . +..++.++.+++.+||+.+|++||++.+++++|+++.+.
T Consensus 241 ~~~~----~-----~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 241 GRVL----E-----R----------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCC----C-----C----------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 0000 0 0 012345688999999999999999999999999999764
No 76
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-38 Score=308.63 Aligned_cols=271 Identities=25% Similarity=0.397 Sum_probs=212.2
Q ss_pred HHHhhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHh--CCCccceeeeeeeecC----
Q 005760 387 LCRATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS--IRHRNIIKVISSCSNE---- 460 (678)
Q Consensus 387 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~---- 460 (678)
......+..+.+.||+|.||.||+|+| .|+.||||+|... +.+.+.+|.++.+. ++|+||+.+++....+
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred HHhhhheeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 444566788899999999999999999 5899999999743 33667788888875 5999999999876443
Q ss_pred CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhc-----CCCCCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF-----GYSAQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~-----~~~~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
.++++|++|.+.|+|.||+.+. .++.....+++..+|.||+|||. +.+..|.|||||+.|||+..+|.+.|+|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 3678999999999999999875 48899999999999999999995 3356799999999999999999999999
Q ss_pred eccccccCCCC--CcceeecccCCccccCccccCCCC----C-C-ccchHHHHHHHHHHHHcC----------CCCCCcc
Q 005760 536 FGIAKLLTRED--QSTIQTQTLATIGYMAPEYGKEGR----V-S-ANGDVYSFGIMLMETFTR----------KKPTDEI 597 (678)
Q Consensus 536 fg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~----~-~-~~~DvwslGv~l~ell~g----------~~p~~~~ 597 (678)
+|+|....... -.......+||-+|||||++...- + + ..+||||||.++||+..+ +.||++.
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 99998775432 122345678999999999986542 1 2 358999999999999853 4688887
Q ss_pred cCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 598 FNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
.+.+....+.-+-.--.+....++. .....++...+.++|+.||..+|..|.||-.+.+.|.++.+
T Consensus 440 Vp~DPs~eeMrkVVCv~~~RP~ipn---------rW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCVQKLRPNIPN---------RWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCHHHHhcceeecccCCCCCc---------ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 7766665543221111112222222 22234566678899999999999999999999999998863
No 77
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.4e-38 Score=315.73 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=203.1
Q ss_pred cCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
++|++.+.||+|+||.||.|+..++..+|+|.+.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4578889999999999999988777789999886432 234678899999999999999999999998888999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++......+++..++.++.|++.|++||| +.+++|+||+|+||+++.++.+|++|||.++...... ....
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-~~~~ 158 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE-YTSS 158 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCc-eeec
Confidence 99999999876556899999999999999999999 9999999999999999999999999999987654322 1122
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
....++..|+|||...+..++.++|||||||++|||++ |..||......+ ....+..... ...+
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~~~-----~~~~-------- 223 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKVSQGLR-----LYRP-------- 223 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHhcCCC-----CCCC--------
Confidence 23345678999999988889999999999999999998 899986432211 1111110000 0000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 224 -----~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 -----HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 012455889999999999999999999998764
No 78
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=9.4e-38 Score=317.54 Aligned_cols=258 Identities=25% Similarity=0.418 Sum_probs=203.5
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCc----EEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGM----EVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
++|++.+.||+|+||.||+|.+. +++ .+++|.+..... ....++..|+.+++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 56888899999999999999853 454 477777753322 233567778888999999999999998864 45679
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
++||+++|+|.+++......+++..+..++.|++.|++||| +++++||||||+||++++++.+|++|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999999876667899999999999999999999 899999999999999999999999999999866433
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
..........++..|+|||...++.++.++|||||||++||+++ |..||.+..... ..+.+.... ....+
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~~~~-----~~~~~-- 233 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLLEKGE-----RLAQP-- 233 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHCCC-----cCCCC--
Confidence 32223334557788999999988899999999999999999998 999986533221 111111000 00011
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
..++.++.+++.+||..+|++|||+.|+++.|..+...
T Consensus 234 -----------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 234 -----------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred -----------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 11344578899999999999999999999999987654
No 79
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-37 Score=323.05 Aligned_cols=198 Identities=25% Similarity=0.388 Sum_probs=174.1
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.++|++.+.||+|+||.||+|... ++..+|+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 478999999999999999999865 788999999875422 344678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++++|.+++.... .+++..+..++.|++.|+.||| + .+++|+||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 999999999997654 4788899999999999999999 6 47999999999999999999999999998754321
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDE 596 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~ 596 (678)
......++..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12334688999999999988899999999999999999999999875
No 80
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.8e-38 Score=342.47 Aligned_cols=250 Identities=23% Similarity=0.305 Sum_probs=202.0
Q ss_pred CCCCCccccCCCceeEEEEEeC-C-CcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-D-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
.|.+.+.||+|++|.||+|... + ++.||+|.+..........+..|+++++.++||||+++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999743 4 6788999876554444566788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 471 PHGSLEKYLHSS---NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 471 ~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
++|+|.+++... ...+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999987542 335788899999999999999999 99999999999999999999999999999987643322
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
........||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .......... ++
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-----~~~~~~~~~~----~~----- 290 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-----IMQQVLYGKY----DP----- 290 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhCCC----CC-----
Confidence 223345569999999999999899999999999999999999999986532211 1110000000 00
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+..++.++.+++.+||+.||++||++.|++.
T Consensus 291 ------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 ------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 01123456889999999999999999999875
No 81
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.8e-37 Score=313.54 Aligned_cols=258 Identities=24% Similarity=0.359 Sum_probs=207.6
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+++++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5789999999999999999985 478999999875422 233456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 468 EYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 468 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
||+++++|.+++.. ....++...+..++.|++.|++||| +++++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988853 2335788899999999999999999 99999999999999999999999999999876543
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
.. .......+++.|+|||.+.+..++.++|+||+|+++|||++|+.||.............+.. ...+..
T Consensus 159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 228 (267)
T cd08228 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQ--------CDYPPL 228 (267)
T ss_pred hh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhc--------CCCCCC
Confidence 22 11223468889999999988889999999999999999999999986532221112111110 000110
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
....++.++.+++.+||+.+|++||++.|+++.++.++
T Consensus 229 ---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 229 ---------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ---------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 01234566899999999999999999999999999874
No 82
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.6e-38 Score=325.19 Aligned_cols=241 Identities=23% Similarity=0.326 Sum_probs=195.1
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+.||+|+||.||++.. .+|..||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999985 478999999997542 233456678999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeec
Q 005760 474 SLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553 (678)
Q Consensus 474 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 553 (678)
+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++....... .....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Ccccc
Confidence 9999887654 4889999999999999999999 9999999999999999999999999999987532211 12234
Q ss_pred ccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhH
Q 005760 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFV 633 (678)
Q Consensus 554 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (678)
..|++.|+|||.+.+..++.++|||||||++|||++|+.||....... ........ ....|
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-~~~~~~~~-------~~~~p----------- 215 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-LFELILME-------EIRFP----------- 215 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHhcC-------CCCCC-----------
Confidence 568999999999999899999999999999999999999986532211 11111000 00000
Q ss_pred HHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 634 AKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 634 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
..+++++.+++.+||++||++|| ++.++++
T Consensus 216 --~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 216 --RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred --CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 12345688999999999999998 8888875
No 83
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.5e-38 Score=313.42 Aligned_cols=251 Identities=27% Similarity=0.428 Sum_probs=202.4
Q ss_pred cCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
.+|++.+.||+|+||.||+|.++++..+|+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 3578899999999999999998777889999986432 233568889999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++......+++..+..++.|++.|++||| +.+++||||+|+||+++.++.+|++|||+++...... ....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~-~~~~ 158 (256)
T cd05059 83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ-YTSS 158 (256)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccc-cccc
Confidence 99999999876556899999999999999999999 9999999999999999999999999999987653221 1111
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
....++..|+|||...+..++.++||||||+++|||++ |+.||......+. ...+... ....
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~~--------~~~~------- 221 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV--VESVSAG--------YRLY------- 221 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH--HHHHHcC--------CcCC-------
Confidence 22234567999999998899999999999999999999 7888865332211 1111100 0000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
.+..++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 222 ---~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 ---RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0012455689999999999999999999999886
No 84
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8e-38 Score=318.93 Aligned_cols=255 Identities=27% Similarity=0.471 Sum_probs=203.5
Q ss_pred cCCCCCccccCCCceeEEEEEe-----CCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-----GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
++|++.+.||+|+||.||+|.. .++..||+|.+..... +....+.+|+++++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4678889999999999999973 2567899999864322 334678889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC
Q 005760 466 VLEYMPHGSLEKYLHSSN----------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM 529 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~ 529 (678)
||||+++++|.+++.... ..+++.++..++.|++.|++||| +++++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 999999999999985321 24678888999999999999999 99999999999999999999
Q ss_pred cEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhh
Q 005760 530 VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWV 608 (678)
Q Consensus 530 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~ 608 (678)
.+|++|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.+... ....+.+
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~ 239 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMV 239 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 999999999976643332223344456778999999988889999999999999999998 8888865322 1111111
Q ss_pred hcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
..... .. .+..+++++.+++.+||+.||++||++.++.+.|.+
T Consensus 240 ~~~~~-----------~~-------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 RKRQL-----------LP-------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HcCCc-----------CC-------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11000 00 011245568899999999999999999999999875
No 85
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=338.25 Aligned_cols=260 Identities=22% Similarity=0.321 Sum_probs=209.3
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeCCC-cEEEEEEeecccCchhhhHHHHHHHHHhCC-Cccceeeeee-eec------
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLGDG-MEVAMKVFNLQYGRVFKSFDVECEMMKSIR-HRNIIKVISS-CSN------ 459 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~-~~~------ 459 (678)
....++++.+.|.+|||+.||.|....+ ..+|+|++-.......+.+.+|+++|+.|+ |+|||.+++. ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 3455678889999999999999986554 999999987777778899999999999997 9999999993 211
Q ss_pred CCeEEEEEEecCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecc
Q 005760 460 EEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 538 (678)
Q Consensus 460 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~ 538 (678)
....+|+||||.||.|-+++..+ ...+++.++++|+.++++|+++|| ..+..|||||||-+|||++.+|+.||||||.
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH-~~~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH-YLKPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh-cCCCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 24678999999999999999743 234999999999999999999999 3345599999999999999999999999999
Q ss_pred ccccCCCCCcc-------eeecccCCccccCcccc---CCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhh
Q 005760 539 AKLLTREDQST-------IQTQTLATIGYMAPEYG---KEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWV 608 (678)
Q Consensus 539 ~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~ 608 (678)
|+......... ..-....|+.|+|||.+ .+..+++|+|||+|||+||-|+....||+..-.. .+
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--aI---- 266 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--AI---- 266 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--eE----
Confidence 97544332111 11223589999999964 5667899999999999999999999999763221 11
Q ss_pred hcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
++ ..+.++....++..+.+||+.||+.||.+||++.|++..+.++..
T Consensus 267 -----------ln------g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 267 -----------LN------GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred -----------Ee------ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 11 111222223577889999999999999999999999999998864
No 86
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.1e-37 Score=314.30 Aligned_cols=254 Identities=25% Similarity=0.415 Sum_probs=204.4
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
.+|++.+.||+|+||.||+|..+ +++.||+|.+... ......+.+|+++++.++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45778899999999999999754 6889999998643 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++++|.+++.... ..+++..+..++.|+++|++||| +++++||||||+||++++++.+||+|||++....... ..
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~-~~ 160 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YT 160 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccce-ee
Confidence 9999999997543 35889999999999999999999 9999999999999999999999999999997654321 11
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
.......+..|+|||.+.+..++.++|||||||++|||++ |..||...... .......... .+.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~--------~~~----- 225 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKGY--------RME----- 225 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCC--------CCC-----
Confidence 1222334678999999988899999999999999999998 88888653211 1111111000 000
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+..++.++.+++.+||+.+|++||++.|+++.|+++
T Consensus 226 -----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 -----RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0112456688999999999999999999999999875
No 87
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7e-38 Score=318.74 Aligned_cols=256 Identities=29% Similarity=0.476 Sum_probs=204.7
Q ss_pred hcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
..+|...+.||+|+||.||+|.. .++..+|+|.+..........+.+|+++++.++|+||+++++++.+.+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 35678889999999999999963 246679999886554455678899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCc
Q 005760 465 LVLEYMPHGSLEKYLHSSN--------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMV 530 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~ 530 (678)
++|||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCC
Confidence 9999999999999997643 24788999999999999999999 999999999999999999999
Q ss_pred EEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhh
Q 005760 531 AHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 531 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~ 609 (678)
+||+|||++................+++.|+|||...+..++.++|||||||++|||++ |..||......+. .....
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~~ 238 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA--IECIT 238 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH--HHHHH
Confidence 99999999875543222222233445788999999998899999999999999999998 8888865322211 11110
Q ss_pred cccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 610 DWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
... .... +..+++.+.+++.+||+.||.+||++.|+.+.|++
T Consensus 239 ~~~-----~~~~-------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 239 QGR-----ELER-------------PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred cCc-----cCCC-------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 000 0000 01244568899999999999999999999999863
No 88
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.8e-38 Score=329.47 Aligned_cols=246 Identities=22% Similarity=0.273 Sum_probs=199.7
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-C-CcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-D-GMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
.++|.+.+.||+|+||.||+|..+ + +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 457899999999999999999753 3 4689999986432 2344667889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 999999999999998765 4888999999999999999999 999999999999999999999999999999765321
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......... ..-|
T Consensus 185 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-~~~~i~~~~-------~~~p--- 248 (340)
T PTZ00426 185 -----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-IYQKILEGI-------IYFP--- 248 (340)
T ss_pred -----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-HHHHHhcCC-------CCCC---
Confidence 123568999999999988889999999999999999999999997532211 111111000 0001
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK 666 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~~ 666 (678)
...+.++.+++.+|++.||++|+ +++|+++.
T Consensus 249 ----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 249 ----------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ----------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 11234577999999999999995 88888753
No 89
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.1e-37 Score=314.60 Aligned_cols=269 Identities=25% Similarity=0.412 Sum_probs=204.1
Q ss_pred cCC-CCCccccCCCceeEEEEEe-----CCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeec--CCe
Q 005760 392 DGF-SENNLIGRGSFGSVFKARL-----GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSN--EEF 462 (678)
Q Consensus 392 ~~~-~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~ 462 (678)
++| ...+.||+|+||+||++.. .+++.||+|.+..... .....+.+|+++++.++||||+++++++.. ...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 344 7889999999999988642 3678899999865432 345678889999999999999999998765 346
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
.++||||+++++|.+++.... +++..+..++.|++.|+.||| +++++||||||+||+++.++.++++|||++...
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~~--l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKHK--LNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEEEecCCCCCCHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 789999999999999997653 899999999999999999999 999999999999999999999999999999765
Q ss_pred CCCCCc-ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh-cccCCcccccc
Q 005760 543 TREDQS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN-DWLPISTKEIV 620 (678)
Q Consensus 543 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 620 (678)
...... .......++..|+|||...+..++.++||||||+++|||++|..||............... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 432211 1122234566799999998888999999999999999999999998653221111111000 00000011111
Q ss_pred cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 621 DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
+.... ...+..++.++.+++.+||+.+|++||+++++++.|++++
T Consensus 238 ~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMR------LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCC------CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11110 0011235667999999999999999999999999999875
No 90
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=7.2e-38 Score=318.20 Aligned_cols=256 Identities=24% Similarity=0.420 Sum_probs=201.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF 462 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 462 (678)
..++|++.+.||+|+||.||+|... ++..||+|++..... .....+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999998642 356799999854322 234568889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhCCC---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEE
Q 005760 463 KALVLEYMPHGSLEKYLHSSNY---------ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHL 533 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl 533 (678)
.++||||+++++|.++++.... .+++..+..++.|++.|++||| +.+++|+||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999975321 3567888999999999999999 899999999999999999999999
Q ss_pred EeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhccc
Q 005760 534 SDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWL 612 (678)
Q Consensus 534 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 612 (678)
+|||++................++..|+|||.+.++.++.++|||||||++|||++ |..||...... ...........
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~ 239 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-QVLRFVMEGGL 239 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCc
Confidence 99999876543322222223345788999999998889999999999999999999 68888653221 11111111000
Q ss_pred CCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 613 PISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
+ + . +..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 240 ~-------~--~----------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 240 L-------D--K----------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred C-------C--C----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 0 0 0 0123456889999999999999999999999886
No 91
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.7e-38 Score=327.31 Aligned_cols=266 Identities=22% Similarity=0.318 Sum_probs=196.3
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC-----CeEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE-----EFKA 464 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~ 464 (678)
+|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+++++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478889999999999999985 478999999986432 22345678899999999999999999987533 3579
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+||||+. ++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999995 68999887654 4889999999999999999999 99999999999999999999999999999975432
Q ss_pred CCC-cceeecccCCccccCccccCC--CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccc----
Q 005760 545 EDQ-STIQTQTLATIGYMAPEYGKE--GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK---- 617 (678)
Q Consensus 545 ~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 617 (678)
... ........+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+.... .....+.........
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhCCCCHHHHH
Confidence 211 122234578999999998865 57899999999999999999999999653211 000111000000000
Q ss_pred ccccC-------ccCCccchhhH-HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 618 EIVDP-------NLLSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 618 ~~~~~-------~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+... ........... .....++++.+++.+||+.||++||++.|+++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00000000000 00123566889999999999999999999985
No 92
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.7e-38 Score=324.95 Aligned_cols=239 Identities=25% Similarity=0.277 Sum_probs=192.5
Q ss_pred ccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 400 IGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 400 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
||+|+||.||+|... +++.||+|++.... ......+..|+.+++.++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999854 68899999986432 23445677899999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeeccc
Q 005760 476 EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555 (678)
Q Consensus 476 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 555 (678)
.+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++..... ........
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG-RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD--DDKTNTFC 154 (312)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC--CCcccccc
Confidence 99997654 4889999999999999999999 999999999999999999999999999998753221 12223456
Q ss_pred CCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHH
Q 005760 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK 635 (678)
Q Consensus 556 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (678)
||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ........... . .+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-----~~~~~~~~~~~---~-------------~~ 213 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-----EMYRKILQEPL---R-------------FP 213 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH-----HHHHHHHcCCC---C-------------CC
Confidence 899999999999989999999999999999999999999653211 11111110000 0 00
Q ss_pred HHHHHHHHHHHhhccccCcCCCCC---HHHHHH
Q 005760 636 EQCVSFVFNVAMECTVESPEQRIN---AKEIVT 665 (678)
Q Consensus 636 ~~~~~~l~~l~~~cl~~dP~~Rps---~~ell~ 665 (678)
...++++.+++.+||+.||++||+ +.|++.
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 123456889999999999999985 566553
No 93
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=8.8e-38 Score=324.85 Aligned_cols=242 Identities=24% Similarity=0.334 Sum_probs=195.7
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+.||+|+||.||++.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999985 478999999997542 234466788999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeec
Q 005760 474 SLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQ 553 (678)
Q Consensus 474 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 553 (678)
+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER-VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATMKT 154 (328)
T ss_pred CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--cccccc
Confidence 9999887654 4889999999999999999999 999999999999999999999999999998753221 112234
Q ss_pred ccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhH
Q 005760 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFV 633 (678)
Q Consensus 554 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (678)
..||+.|+|||.+.+..++.++||||+||++|||++|+.||......+ ........ ....|
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~-----~~~~~~~~---~~~~p----------- 215 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-----LFELILME---DIKFP----------- 215 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH-----HHHHhccC---CccCC-----------
Confidence 568999999999998899999999999999999999999996532211 11100000 00000
Q ss_pred HHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHH
Q 005760 634 AKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK 666 (678)
Q Consensus 634 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~~ 666 (678)
...+.++.+++.+||++||++|+ ++.|+++.
T Consensus 216 --~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 216 --RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 12345688999999999999997 89998753
No 94
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=309.65 Aligned_cols=275 Identities=26% Similarity=0.345 Sum_probs=206.2
Q ss_pred hcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHh--CCCccceeeeeeeecCC----eEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKS--IRHRNIIKVISSCSNEE----FKA 464 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~ 464 (678)
-......+.||+|.||.||+|.+. ++.||||++.. +..+.|..|..+.+. ++|+||+++++.-...+ .++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 345566789999999999999984 59999999974 345778888888775 58999999999876555 889
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeEEcCCCCCCeeecCCCcEEEEeecc
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY------SAQVIHCDLKPSNVLLDDNMVAHLSDFGI 538 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~dl~~~Nill~~~~~~kl~Dfg~ 538 (678)
+|+||.+.|+|.+++..+- .+|...-+|+..+++||+|||++. +..|+|||||++|||+..|+++.|+|||+
T Consensus 285 LVt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EEeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 9999999999999998775 899999999999999999999744 45799999999999999999999999999
Q ss_pred ccccCCCCCcceeecccCCccccCccccCCCCC------CccchHHHHHHHHHHHHcCCCCCCc-ccCC-ccchhhhhhc
Q 005760 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV------SANGDVYSFGIMLMETFTRKKPTDE-IFNG-EMTLKHWVND 610 (678)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~------~~~~DvwslGv~l~ell~g~~p~~~-~~~~-~~~~~~~~~~ 610 (678)
|.++............+||.+|||||++.+.-- -.+.||||+|.+||||+++-.-++. ..+. ...+..-+..
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 998875544444445789999999999876421 2358999999999999986543321 0000 0011100000
Q ss_pred ccC-CcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 611 WLP-ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 611 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
.+. +.+...+-.....+.-.+..........+.+.+..||+.||+.|.|+.=+-+++.++.
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 000 0111122122222222333444456677899999999999999999999999988875
No 95
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-37 Score=327.29 Aligned_cols=263 Identities=21% Similarity=0.215 Sum_probs=199.1
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..+|.+.+.||+|+||.||+|.. .+++.||+|... ...+.+|+++++.++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 46799999999999999999975 578999999753 24567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+. ++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....... ..
T Consensus 165 ~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~ 238 (391)
T PHA03212 165 YK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-AN 238 (391)
T ss_pred CC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-cc
Confidence 95 68988887654 4889999999999999999999 9999999999999999999999999999996543221 11
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc------cchhhhhhccc--CCcc-----
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE------MTLKHWVNDWL--PIST----- 616 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~------~~~~~~~~~~~--~~~~----- 616 (678)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+...+.... +...
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 2234579999999999999899999999999999999999998865422111 11111111000 0000
Q ss_pred ---cccc-----cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 ---KEIV-----DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 ---~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.... ..................+.++.+++.+||+.||++|||++|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 000000000011111235667999999999999999999999985
No 96
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.2e-37 Score=313.83 Aligned_cols=267 Identities=28% Similarity=0.434 Sum_probs=203.8
Q ss_pred cCCCCCccccCCCceeEEEEEe-----CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeec--CCeEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-----GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN--EEFKA 464 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 464 (678)
.+|++.+.||+|+||.||+|.. .++..||+|.+........+.+.+|+++++.++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4788899999999999999974 3578999999876555556778899999999999999999997643 45688
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+|+||+++++|.+++...+..+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++.....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 999999999999999876656899999999999999999999 99999999999999999999999999999986643
Q ss_pred CCCcc-eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccC--Cc---ccc
Q 005760 545 EDQST-IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP--IS---TKE 618 (678)
Q Consensus 545 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~--~~---~~~ 618 (678)
..... ......++..|+|||.+.+..++.++|||||||++|||++|..|+...... .......... .. ..+
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHHHHH
Confidence 32211 111223445699999998888999999999999999999987765432110 0000000000 00 000
Q ss_pred cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 619 IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
..... .....+..++.++.+++.+||+.+|++|||+.|+++.|+++
T Consensus 238 ~~~~~------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 238 LLKNN------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHhcC------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000 00001123456799999999999999999999999999876
No 97
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-37 Score=331.14 Aligned_cols=252 Identities=21% Similarity=0.307 Sum_probs=196.8
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.|...+.||+|+||+||+|.. ++++.||+|++.... ....+.+..|+++++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578899999999999999974 578999999996532 2344668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC-
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ- 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~- 547 (678)
|+++|+|.+++.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++++||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999999997665 4788888999999999999999 99999999999999999999999999999754321000
Q ss_pred --------------------------------------------cceeecccCCccccCccccCCCCCCccchHHHHHHH
Q 005760 548 --------------------------------------------STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 583 (678)
Q Consensus 548 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~ 583 (678)
........||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 000123469999999999988889999999999999
Q ss_pred HHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhh--ccccCcCCCCCHH
Q 005760 584 LMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAME--CTVESPEQRINAK 661 (678)
Q Consensus 584 l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP~~Rps~~ 661 (678)
+|||++|+.||......+.. .... .+.. ....+. ...+++++.+++.+ |+..+|..||++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~-~~i~-~~~~----~~~~~~-----------~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQ-LKVI-NWEN----TLHIPP-----------QVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHH-HHHH-cccc----ccCCCC-----------CCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 99999999999753322111 1110 0000 000000 01234567788887 5556666799999
Q ss_pred HHHH
Q 005760 662 EIVT 665 (678)
Q Consensus 662 ell~ 665 (678)
|+++
T Consensus 301 ~~l~ 304 (381)
T cd05626 301 DIKA 304 (381)
T ss_pred HHhc
Confidence 9986
No 98
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.3e-37 Score=318.16 Aligned_cols=259 Identities=24% Similarity=0.389 Sum_probs=206.0
Q ss_pred hhcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecCC
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEE 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 461 (678)
..++|.+.+.||+|+||.||+|.. .++..||+|.++... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 346789999999999999999963 235579999986542 23346788999999999 7999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
..++||||+++++|.++++... ..+++.++..++.|++.|++||| +++++|+||||+||+++.++.++++|||++.
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 9999999999999999997643 34799999999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCccccc
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEI 619 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (678)
...............++..|+|||.+.++.++.++||||+||++|||++ |+.||......+. .......... .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~~~~~~~~~-----~ 263 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKLIKEGYR-----M 263 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HHHHHHcCCc-----C
Confidence 6543322222233456788999999988889999999999999999998 9999865332211 1111110000 0
Q ss_pred ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 620 VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.. +...++++.+++.+||+++|++||++.|+++.|+++
T Consensus 264 ~~-------------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 AQ-------------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CC-------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00 011234588999999999999999999999999874
No 99
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.7e-37 Score=316.04 Aligned_cols=261 Identities=24% Similarity=0.385 Sum_probs=208.8
Q ss_pred hhcCCCCCccccCCCceeEEEEEeCC-----CcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeec-CCe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLGD-----GMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSN-EEF 462 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~ 462 (678)
..++|.+.+.||+|+||.||+|...+ +..|++|.+..... ...+.+.+|+.+++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35688899999999999999998654 68899998864422 345667889999999999999999998755 577
Q ss_pred EEEEEEecCCCCHHHHhhhCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 463 KALVLEYMPHGSLEKYLHSSN-------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
.++++||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+|++|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECC
Confidence 889999999999999987542 34789999999999999999999 99999999999999999999999999
Q ss_pred eccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCC
Q 005760 536 FGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPI 614 (678)
Q Consensus 536 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~ 614 (678)
||+++.+.............++..|+|||.+.+..++.++|||||||++||+++ |+.||..... .....++.....
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~- 237 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDGYR- 237 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcCCC-
Confidence 999976543332222233445678999999988889999999999999999999 9999865322 122222211000
Q ss_pred cccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 615 STKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.. ....+++++.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 238 ----~~-------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 238 ----LA-------------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred ----CC-------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 00 0112345688999999999999999999999999998764
No 100
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.6e-37 Score=317.36 Aligned_cols=258 Identities=26% Similarity=0.448 Sum_probs=202.6
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCc--EEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGM--EVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 466 (678)
++|++.+.||+|+||.||+|..+ ++. .+++|.++... ....+.+..|+++++++ +||||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 67899999999999999999764 333 47888876422 23346788899999999 799999999999999999999
Q ss_pred EEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcE
Q 005760 467 LEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVA 531 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~ 531 (678)
+||+++++|.++++... ..+++..+..++.|++.|++||| +++++||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 99999999999997532 24778899999999999999999 9999999999999999999999
Q ss_pred EEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhc
Q 005760 532 HLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVND 610 (678)
Q Consensus 532 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~ 610 (678)
||+|||++..... .........+..|+|||...+..++.++|||||||++|||++ |..||......+. .......
T Consensus 159 kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~-~~~~~~~ 234 (297)
T cd05089 159 KIADFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL-YEKLPQG 234 (297)
T ss_pred EECCcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhcC
Confidence 9999999853221 111111223557999999988889999999999999999997 9999865322110 1110000
Q ss_pred ccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHHh
Q 005760 611 WLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLL 675 (678)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~~ 675 (678)
. .+. .+..++.++.+++.+||+.+|.+||++.++++.|+.+.+...
T Consensus 235 ~---------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 235 Y---------RME----------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred C---------CCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 000 011244568899999999999999999999999999877543
No 101
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.7e-38 Score=331.38 Aligned_cols=252 Identities=23% Similarity=0.350 Sum_probs=199.9
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999854 78999999997532 234456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.++|+|||+++.+.....
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 9999999999998655 4889999999999999999999 99999999999999999999999999999875432110
Q ss_pred cc------------------------------------eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCC
Q 005760 548 ST------------------------------------IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591 (678)
Q Consensus 548 ~~------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~ 591 (678)
.. ......||+.|+|||++.+..++.++||||+||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 00 011245899999999999989999999999999999999999
Q ss_pred CCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC---HHHHHH
Q 005760 592 KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN---AKEIVT 665 (678)
Q Consensus 592 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps---~~ell~ 665 (678)
.||......+. ...+..+.. ....+. ....++++.+++.+|+. +|.+|++ +.|+++
T Consensus 237 ~Pf~~~~~~~~--~~~i~~~~~----~~~~~~-----------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 237 PPFCSDNPQET--YRKIINWKE----TLQFPD-----------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCHHHH--HHHHHcCCC----ccCCCC-----------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99975332111 111111100 000000 00234567899999997 9999998 888876
No 102
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.5e-37 Score=312.44 Aligned_cols=254 Identities=26% Similarity=0.452 Sum_probs=200.5
Q ss_pred CCCCccccCCCceeEEEEEeC----CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCe-----
Q 005760 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF----- 462 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 462 (678)
|.+.+.||+|+||.||+|... .+..||+|.++.... .....+..|++.++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567899999999999999753 247799999875432 234678899999999999999999998765443
Q ss_pred -EEEEEEecCCCCHHHHhhhC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEee
Q 005760 463 -KALVLEYMPHGSLEKYLHSS-----NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDF 536 (678)
Q Consensus 463 -~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Df 536 (678)
.++++||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 78999999999999988543 235788999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCc
Q 005760 537 GIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPIS 615 (678)
Q Consensus 537 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (678)
|+++................+..|+|||.+.+..++.++|||||||++|||++ |..||.+.... ....++.....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~-- 233 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHGNR-- 233 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC--
Confidence 99986644333222223345678999999988889999999999999999999 88888653321 11111110000
Q ss_pred ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.. .+..++.++.+++.+||+.||.+||++.|+++.|+++
T Consensus 234 ---------~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 ---------LK-------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---------CC-------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0113456689999999999999999999999999875
No 103
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.6e-37 Score=316.28 Aligned_cols=257 Identities=25% Similarity=0.403 Sum_probs=203.8
Q ss_pred CCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
+|++.+.||+|+||.||+|... ....+++|.+..... .....+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999742 235688888864432 234678889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCC
Q 005760 466 VLEYMPHGSLEKYLHSSN-----------------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSN 522 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~N 522 (678)
|+||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||+|+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 999999999999986431 24678889999999999999999 9999999999999
Q ss_pred eeecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCc
Q 005760 523 VLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGE 601 (678)
Q Consensus 523 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~ 601 (678)
|++++++.+||+|||+++...............++..|+|||...+..++.++||||||+++|||++ |..||.+....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 9999999999999999976543332222233446678999999888889999999999999999998 99998653221
Q ss_pred cchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 602 MTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
.+........ ... .+..++.++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 237 -~~~~~~~~~~--------~~~----------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 -RLFNLLKTGY--------RME----------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HHHHHHhCCC--------CCC----------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1111111100 000 011234568899999999999999999999999998864
No 104
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-38 Score=323.89 Aligned_cols=244 Identities=27% Similarity=0.434 Sum_probs=204.6
Q ss_pred cccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCHHH
Q 005760 399 LIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEK 477 (678)
Q Consensus 399 ~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 477 (678)
.+|+|.||+||-|+.. ++..+|||.+.....+..+...+|+...+.++|.|||+++|++.+.+..-+.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999854 667799999987777778889999999999999999999999999999999999999999999
Q ss_pred HhhhCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec-CCCcEEEEeeccccccCCCCCcceeecc
Q 005760 478 YLHSSNYIL--DIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDQSTIQTQT 554 (678)
Q Consensus 478 ~l~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 554 (678)
+++..-.++ .+.+.-.+.+||++||.||| ...|||||||..||+++ -.|.+||+|||-++++.. -......+
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TETF 736 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTETF 736 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhcc--CCcccccc
Confidence 999876666 77888899999999999999 99999999999999995 679999999999988753 33445567
Q ss_pred cCCccccCccccCCCC--CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 555 LATIGYMAPEYGKEGR--VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 555 ~~~~~y~aPE~~~~~~--~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
.||..|||||++..+. |+.++|||||||++.||.||++||...-...... .+ ..+.. +.|
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---Fk----VGmyK-vHP---------- 798 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---FK----VGMYK-VHP---------- 798 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---hh----hccee-cCC----------
Confidence 8999999999998774 8899999999999999999999997643321111 00 00000 011
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..++..+.++..++.+|+.+||.+||+|++++.
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 123566778999999999999999999999875
No 105
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-37 Score=319.39 Aligned_cols=260 Identities=29% Similarity=0.456 Sum_probs=205.9
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhC-CCccceeeeeeeecC
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRNIIKVISSCSNE 460 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 460 (678)
...++|++.+.||+|+||.||+|... ....+|+|.+..... +....+.+|+++++.+ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34567889999999999999999753 346799999865422 3345688899999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee
Q 005760 461 EFKALVLEYMPHGSLEKYLHSS---------------NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL 525 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill 525 (678)
+..+++|||+++++|.++++.. ...+++..+..++.|++.|++||| +.+|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEE
Confidence 9999999999999999998642 235788999999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccch
Q 005760 526 DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTL 604 (678)
Q Consensus 526 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~ 604 (678)
+.++.+|++|||+++...............++..|+|||.+.+..++.++|||||||++||+++ |..||......+ .
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~ 243 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--L 243 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--H
Confidence 9999999999999986643322222223345678999999988889999999999999999998 888886532211 1
Q ss_pred hhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 605 KHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
........ .+. .+..++.++.+++.+||++||++|||+.|+++.|+++.
T Consensus 244 ~~~~~~~~--------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 FKLLKEGY--------RME----------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHcCC--------cCC----------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111000 000 01123456889999999999999999999999999874
No 106
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.3e-37 Score=311.63 Aligned_cols=258 Identities=24% Similarity=0.369 Sum_probs=207.9
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|.. .+++.+|||.+.... .....++.+|+.+++.++||||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999985 589999999875432 223467888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 468 EYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 468 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
||+++++|.+++.. ....+++..++.++.|++.|++||| +++++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998864 2335789999999999999999999 99999999999999999999999999999876542
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
.. .......++..|+|||.+.+..++.++|+||+|+++|+|++|..||.............+. ....+..
T Consensus 159 ~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~ 228 (267)
T cd08229 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE--------QCDYPPL 228 (267)
T ss_pred CC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh--------cCCCCCC
Confidence 22 1123346888999999998888999999999999999999999998643222111111111 0001110
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
....++.++.+++.+||+.||++|||+.+|++.+++++
T Consensus 229 ---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 229 ---------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 01134567899999999999999999999999999875
No 107
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-37 Score=318.16 Aligned_cols=254 Identities=25% Similarity=0.443 Sum_probs=201.9
Q ss_pred CCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
+|.+.+.||+|+||.||+|... ++..||+|+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4677889999999999999742 357899999875433 234668889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCc
Q 005760 466 VLEYMPHGSLEKYLHSS---------------NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMV 530 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~ 530 (678)
++||+++++|.+++... ...+++..+..++.|++.|++|+| +++++||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCc
Confidence 99999999999998532 124778889999999999999999 999999999999999999999
Q ss_pred EEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhh
Q 005760 531 AHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 531 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~ 609 (678)
+||+|||+++...............+++.|+|||.+.++.++.++||||+||++|||++ |..||.+.... .....+.
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~i~ 240 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVIEMIR 240 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH
Confidence 99999999876543332222334456789999999988889999999999999999998 77787653221 1111111
Q ss_pred cccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 610 DWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
. ..... .+..++..+.+++.+||+.+|++||+++|++..|+.
T Consensus 241 ~-----------~~~~~-------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 241 N-----------RQVLP-------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred c-----------CCcCC-------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 0 00000 012356668899999999999999999999999874
No 108
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.2e-37 Score=309.75 Aligned_cols=254 Identities=26% Similarity=0.451 Sum_probs=203.1
Q ss_pred hcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
.++|++.+.||+|+||.||+|...++..||+|++.... ...+.+.+|+++++.++||||+++++.+.+ +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 45789999999999999999987776789999987432 234678899999999999999999998754 5578999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++++|.+++.... ..+++..+..++.|++.||+|+| +.+++|+||+|+||++++++.++|+|||.+........ .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~ 158 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 158 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc-c
Confidence 9999999997643 35788999999999999999999 99999999999999999999999999999976543322 1
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......++..|+|||...++.++.++||||||+++|||++ |..||......+. ........ ..
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-~~~~~~~~---------~~------ 222 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-LDQVERGY---------RM------ 222 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-HHHHhcCC---------CC------
Confidence 2223446678999999988889999999999999999999 7788765332111 11000000 00
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.....++..+.+++.+|++.+|++||++.++++.|+..
T Consensus 223 ----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 ----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ----CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00123456688999999999999999999999999875
No 109
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.9e-37 Score=327.14 Aligned_cols=261 Identities=25% Similarity=0.390 Sum_probs=204.9
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCC-CccceeeeeeeecC
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIR-HRNIIKVISSCSNE 460 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~ 460 (678)
...++|.+.+.||+|+||.||+|.+. .+..||+|++..... ...+.+..|+.++..+. ||||+++++++...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34557888999999999999999753 346899999975432 23456889999999997 99999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhCC---------------------------------------------------------
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSN--------------------------------------------------------- 483 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 483 (678)
+..++|+||+++|+|.++++..+
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999999999996532
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCe
Q 005760 484 ----------------------------------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNV 523 (678)
Q Consensus 484 ----------------------------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Ni 523 (678)
..+++..+..++.|++.|++||| +.+++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceE
Confidence 12466678889999999999999 99999999999999
Q ss_pred eecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCcc
Q 005760 524 LLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEM 602 (678)
Q Consensus 524 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~ 602 (678)
+++.++.+|++|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||......+.
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~ 350 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ 350 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence 999999999999999976532222122233456788999999988889999999999999999998 8889865322211
Q ss_pred chhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 603 TLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
.......... ... +..++.++.+++.+||+.+|.+||+++|+++.|+.+.
T Consensus 351 ~~~~~~~~~~------~~~-------------p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 FYNAIKRGYR------MAK-------------PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHcCCC------CCC-------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1110000000 000 1123456889999999999999999999999999864
No 110
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.8e-38 Score=327.77 Aligned_cols=252 Identities=24% Similarity=0.328 Sum_probs=201.5
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|.+.+.||+|+||.||+|.. .+++.||+|+++... .+..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 4688999999999999999985 478999999997542 234466788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.+....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999999999887566899999999999999999999 99999999999999999999999999999976643222
Q ss_pred cceeecccCCccccCccccC------CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 548 STIQTQTLATIGYMAPEYGK------EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
.......+|+.|+|||++. ...++.++||||+||++|||++|+.||....... ........ ......
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~~~i~~~---~~~~~~-- 230 (330)
T cd05601 158 -VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-TYNNIMNF---QRFLKF-- 230 (330)
T ss_pred -eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-HHHHHHcC---CCccCC--
Confidence 1223456899999999876 4567889999999999999999999996532211 11111000 000000
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+ .....+.++.+++..|++ +|++||++.++++
T Consensus 231 ~-----------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 231 P-----------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred C-----------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 001234558899999998 9999999999875
No 111
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.2e-37 Score=314.94 Aligned_cols=260 Identities=24% Similarity=0.397 Sum_probs=206.0
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCc----EEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGM----EVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
.++|+..+.||+|+||+||+|.+ .+++ .||+|++.... ......+..|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 45788899999999999999974 3444 48999986543 23456778899999999999999999998764 467
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+++||+++|+|.++++.....+++..+..++.|++.|++||| +++++||||||+||+++.++.+||+|||+++....
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999999876666899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 623 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (678)
...........++..|+|||...+..++.++|||||||++|||++ |..||...... ....++...... +
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~-------~- 231 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDLLEKGERL-------P- 231 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCcC-------C-
Confidence 322222223345678999999988889999999999999999998 88888653221 122222111000 0
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHH
Q 005760 624 LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSL 674 (678)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~ 674 (678)
.+..++.++.+++.+||+.||++||++.|+++.|+.+....
T Consensus 232 ----------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 232 ----------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 00124456889999999999999999999999998886543
No 112
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.7e-37 Score=310.49 Aligned_cols=255 Identities=27% Similarity=0.372 Sum_probs=202.5
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
.++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 45799999999999999999985 57899999999765444556778899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.++++... .+++..+..++.|++.|++||| +.+|+|||++|+||+++.++.++|+|||++....... .
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--~ 161 (267)
T cd06646 88 CGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI--A 161 (267)
T ss_pred CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc--c
Confidence 99999999987654 4889999999999999999999 9999999999999999999999999999997653221 1
Q ss_pred eeecccCCccccCccccC---CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 550 IQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
......++..|+|||.+. ...++.++||||+||++|||++|+.||......+.. ..+... ....+...
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~~~~-------~~~~~~~~- 232 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMSKS-------NFQPPKLK- 232 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eeeecC-------CCCCCCCc-
Confidence 123346888999999874 345788999999999999999999998643221111 000000 00000000
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
.....+..+.+++.+||+.+|++||+++++++.+
T Consensus 233 -------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 233 -------DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -------cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0112345688999999999999999999998753
No 113
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-37 Score=326.96 Aligned_cols=202 Identities=24% Similarity=0.375 Sum_probs=174.9
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||+||+|.. .+++.||+|++.... ......+..|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4688999999999999999975 478999999996532 223456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.+.+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 9999999999998654 4889999999999999999999 99999999999999999999999999999875432110
Q ss_pred c---------------------------------ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCC
Q 005760 548 S---------------------------------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPT 594 (678)
Q Consensus 548 ~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~ 594 (678)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0 0012346999999999999989999999999999999999999999
Q ss_pred Ccc
Q 005760 595 DEI 597 (678)
Q Consensus 595 ~~~ 597 (678)
.+.
T Consensus 237 ~~~ 239 (363)
T cd05628 237 CSE 239 (363)
T ss_pred CCC
Confidence 753
No 114
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=9.5e-37 Score=308.20 Aligned_cols=258 Identities=23% Similarity=0.361 Sum_probs=208.0
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|+++++.++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999865 89999999886422 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 468 EYMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 468 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
||+++++|.+++... ...++...+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 335788999999999999999999 99999999999999999999999999999875532
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
.. .......++..|+|||.+.+..++.++||||+||++|+|++|+.||..... ............. . +.
T Consensus 159 ~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~----~-~~- 227 (267)
T cd08224 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEKCD----Y-PP- 227 (267)
T ss_pred CC--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhhhcCC----C-CC-
Confidence 21 112234578899999999888899999999999999999999999854321 1111111100000 0 00
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
.....++.++.+++.+||+.+|++||++.++++.|+.++
T Consensus 228 --------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 228 --------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 001134566889999999999999999999999999876
No 115
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=303.83 Aligned_cols=248 Identities=26% Similarity=0.386 Sum_probs=212.2
Q ss_pred CCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
|.++.+||+|+||.||+|.+ ..|+.||+|.+... ...+++..|+.++++++.|++|++||.+.....+++|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 55678999999999999975 47999999998654 3568889999999999999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+..+.++..+..+.+..+..+.+..++||+||| ...-+|||||+.|||++.+|.+|+.|||.|-.+++ +-....
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TMAKRN 187 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TMAKRN 187 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhh--hHHhhC
Confidence 9999999988888999999999999999999999 88889999999999999999999999999976643 334456
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...||+.|||||++..-.|..++||||+|++..||..|++||.+..+...- .++ |. ..+..+
T Consensus 188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI--------------FMI-PT---~PPPTF 249 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI--------------FMI-PT---KPPPTF 249 (502)
T ss_pred ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee--------------Eec-cC---CCCCCC
Confidence 778999999999999999999999999999999999999999875443211 111 11 111223
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
-.++..+.++-+++++|+.+.|++|-||.++++.
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 3456677889999999999999999999998763
No 116
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.6e-37 Score=318.93 Aligned_cols=261 Identities=28% Similarity=0.422 Sum_probs=205.8
Q ss_pred hcCCCCCccccCCCceeEEEEEeC--------CCcEEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecC
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG--------DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNE 460 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 460 (678)
.++|.+.+.||+|+||.||+|... ++..+|+|.+.... ......+..|+.+++.+ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 467999999999999999999742 23569999987542 23445688899999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL 525 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill 525 (678)
+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +++++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEE
Confidence 99999999999999999997642 24788899999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccch
Q 005760 526 DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTL 604 (678)
Q Consensus 526 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~ 604 (678)
+.++.+||+|||.+................++..|+|||.+.+..++.++||||+||++|||++ |..||..... ...
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--~~~ 251 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EEL 251 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHH
Confidence 9999999999999876543221111222334578999999988889999999999999999998 8888754221 111
Q ss_pred hhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHH
Q 005760 605 KHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSL 674 (678)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~ 674 (678)
...+.... ... .+..++.++.+++.+||+.+|++||++.|+++.|+++.+..
T Consensus 252 ~~~~~~~~--------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 252 FKLLKEGH--------RMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHHcCC--------CCC----------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 11111000 000 01124556889999999999999999999999999998763
No 117
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6e-38 Score=330.11 Aligned_cols=253 Identities=26% Similarity=0.379 Sum_probs=204.1
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|.+.+.||+|+||.||+|... +++.||+|++.... ......+..|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47889999999999999999864 79999999997532 234567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC-
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED- 546 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~- 546 (678)
||+++++|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999999876 35889999999999999999999 9999999999999999999999999999997654322
Q ss_pred --------------------------CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCC
Q 005760 547 --------------------------QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNG 600 (678)
Q Consensus 547 --------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~ 600 (678)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 011233456899999999999999999999999999999999999999763321
Q ss_pred ccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC-HHHHHHH
Q 005760 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN-AKEIVTK 666 (678)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~ell~~ 666 (678)
.. ... +..+.. ....+.. ..+++++.+++.+|++ ||.+||+ +.|+++.
T Consensus 237 ~~-~~~-i~~~~~----~~~~p~~-----------~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 ET-YNK-IINWKE----SLRFPPD-----------PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HH-HHH-HhccCC----cccCCCC-----------CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11 110 110000 0000000 0135668899999998 9999999 9999863
No 118
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.2e-37 Score=314.54 Aligned_cols=256 Identities=26% Similarity=0.410 Sum_probs=201.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF 462 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 462 (678)
.+++|.+.+.||+|++|.||+|... .+..||+|.+..... .....+..|+.+++.++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3567899999999999999999764 357789998764432 234568889999999999999999999998889
Q ss_pred EEEEEEecCCCCHHHHhhhCCC------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC---cEEE
Q 005760 463 KALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM---VAHL 533 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~---~~kl 533 (678)
.++||||+++++|.+++...+. .+++..+..++.||+.|++||| +++++|+||+|+||+++.++ .+|+
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976532 4788999999999999999999 99999999999999998654 6999
Q ss_pred EeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhccc
Q 005760 534 SDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWL 612 (678)
Q Consensus 534 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 612 (678)
+|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||......+ ....+....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~ 238 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VMEFVTGGG 238 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHcCC
Confidence 99999986633222222223334568999999988899999999999999999997 999987533221 111111100
Q ss_pred CCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 613 PISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
. ... +..++..+.+++.+||+.+|++||++.|+++.|+
T Consensus 239 ~-----~~~-------------~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 239 R-----LDP-------------PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred c-----CCC-------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 0 000 1123456889999999999999999999999885
No 119
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.9e-37 Score=315.09 Aligned_cols=266 Identities=24% Similarity=0.349 Sum_probs=195.6
Q ss_pred cCCCCCccccCCCceeEEEEEe-C-CCcEEEEEEeecccC--chhhhHHHHHHHHHhC---CCccceeeeeeee-----c
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-G-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSI---RHRNIIKVISSCS-----N 459 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----~ 459 (678)
++|++.+.||+|+||.||+|.. . +++.||+|++..... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 4789999999999999999975 3 478899999865432 2234556777777765 6999999999874 3
Q ss_pred CCeEEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecc
Q 005760 460 EEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 538 (678)
Q Consensus 460 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~ 538 (678)
....++||||++ ++|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999996 59999987543 35789999999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc---CCc
Q 005760 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL---PIS 615 (678)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~---~~~ 615 (678)
+...... .......+++.|+|||.+.+..++.++||||+||++|||++|++||.+....+ .+........ +..
T Consensus 157 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 157 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEED 232 (290)
T ss_pred eEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhh
Confidence 9765422 22334568999999999988889999999999999999999999997633211 1111111000 000
Q ss_pred ccccc--cCccCCccchhhH--HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 616 TKEIV--DPNLLSREDINFV--AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 616 ~~~~~--~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..... ............. .....++.+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 0000000000000 00134567889999999999999999999985
No 120
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=339.18 Aligned_cols=256 Identities=23% Similarity=0.325 Sum_probs=203.3
Q ss_pred HHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCC---
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE--- 461 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--- 461 (678)
....++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+..+..++|+|++++.+.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34567999999999999999999974 579999999986542 234456788999999999999999887764332
Q ss_pred -----eEEEEEEecCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEE
Q 005760 462 -----FKALVLEYMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHL 533 (678)
Q Consensus 462 -----~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl 533 (678)
..++||||+++|+|.+++... ...+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEE
Confidence 367999999999999998643 235888999999999999999999 999999999999999999999999
Q ss_pred EeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccC
Q 005760 534 SDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613 (678)
Q Consensus 534 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 613 (678)
+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.....
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~-----~~~~~~~~ 259 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME-----EVMHKTLA 259 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHhc
Confidence 9999997664332222334567999999999999999999999999999999999999999653211 11111110
Q ss_pred CcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.. .++ .+..+++++.+++.+||+.||++||++.++++.
T Consensus 260 ~~----~~~-----------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 260 GR----YDP-----------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CC----CCC-----------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 00 000 011245668899999999999999999999863
No 121
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.1e-37 Score=321.61 Aligned_cols=241 Identities=26% Similarity=0.351 Sum_probs=193.2
Q ss_pred ccccCCCceeEEEEEe----CCCcEEEEEEeeccc----CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 398 NLIGRGSFGSVFKARL----GDGMEVAMKVFNLQY----GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+.||+|+||.||++.. .+++.||+|++.... ......+..|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999974 368899999987532 12335567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++.... .+.+..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (323)
T cd05584 82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG--T 155 (323)
T ss_pred CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--C
Confidence 99999999997665 4778888889999999999999 9999999999999999999999999999987543221 1
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
......|++.|+|||.+.+..++.++||||+||++|||++|+.||....... ......... ..
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-----~~~~~~~~~--------~~---- 218 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-----TIDKILKGK--------LN---- 218 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCC--------CC----
Confidence 2233568999999999998889999999999999999999999996532211 111100000 00
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
.+...++++.+++.+||+.||++|| ++.++++
T Consensus 219 ----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 219 ----LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ----CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0011345588999999999999999 7888765
No 122
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-37 Score=317.79 Aligned_cols=261 Identities=27% Similarity=0.438 Sum_probs=206.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEe--------CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeec
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL--------GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSN 459 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 459 (678)
..++|.+.+.||+|+||.||+|+. .++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 456788999999999999999963 134579999986432 23456788999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCee
Q 005760 460 EEFKALVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVL 524 (678)
Q Consensus 460 ~~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nil 524 (678)
.+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +++++||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEE
Confidence 999999999999999999997642 24677888999999999999999 999999999999999
Q ss_pred ecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccc
Q 005760 525 LDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMT 603 (678)
Q Consensus 525 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~ 603 (678)
++.++.+||+|||.++...............++..|+|||.+.+..++.++||||||+++|||++ |..||...... .
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~ 247 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E 247 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--H
Confidence 99999999999999986643332222233445678999999988889999999999999999998 77887542211 1
Q ss_pred hhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 604 LKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
....+..... .. .+..++.++.+++.+||+.+|++||++.|+++.|+++...
T Consensus 248 ~~~~~~~~~~-----~~-------------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 248 LFKLLKEGHR-----MD-------------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHcCCc-----CC-------------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111110000 00 0113456788999999999999999999999999998754
No 123
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.6e-37 Score=325.00 Aligned_cols=248 Identities=24% Similarity=0.372 Sum_probs=192.8
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|+..+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 4566778999999999999985 4789999999864432 3456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+.. ..++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 154 ~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~ 223 (353)
T PLN00034 154 MDGGSLEGTH-----IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--D 223 (353)
T ss_pred CCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc--c
Confidence 9999986532 2566778889999999999999 9999999999999999999999999999997654221 1
Q ss_pred eeecccCCccccCccccCC-----CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 550 IQTQTLATIGYMAPEYGKE-----GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
......|+..|+|||.+.. ...+.++|||||||++|||++|+.||......+ ........... ..+.
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~-----~~~~- 295 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLMCAICMS-----QPPE- 295 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhcc-----CCCC-
Confidence 1234568999999998743 234568999999999999999999997322211 11110000000 0000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.+..++.++.+++.+||+.||++||++.|+++.
T Consensus 296 ---------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 296 ---------APATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ---------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011345568899999999999999999999863
No 124
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.8e-37 Score=322.41 Aligned_cols=244 Identities=23% Similarity=0.336 Sum_probs=193.2
Q ss_pred CCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHH---HhCCCccceeeeeeeecCCeEEEE
Q 005760 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMM---KSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
|++.+.||+|+||.||+|.. .+++.||+|+++... ....+.+..|++++ +.++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 66788999999999999975 478999999997532 22345566666655 466799999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+++++|..+++.. .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF- 154 (324)
T ss_pred EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-
Confidence 9999999999888654 4899999999999999999999 999999999999999999999999999998643221
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||......+. ....... . ..-
T Consensus 155 -~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~-~~~i~~~----~---~~~----- 220 (324)
T cd05589 155 -GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV-FDSIVND----E---VRY----- 220 (324)
T ss_pred -CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhC----C---CCC-----
Confidence 1223345689999999999998999999999999999999999999865322111 1111000 0 000
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
+..++.++.+++.+||+.||++|| ++.++++
T Consensus 221 --------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 221 --------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred --------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 012345678999999999999999 5666654
No 125
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.8e-37 Score=321.54 Aligned_cols=261 Identities=24% Similarity=0.423 Sum_probs=202.5
Q ss_pred hhcCCCCCccccCCCceeEEEEEe------CCCcEEEEEEeecccC-chhhhHHHHHHHHHhC-CCccceeeeeeeecC-
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL------GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRNIIKVISSCSNE- 460 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~- 460 (678)
..++|++.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++..+ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 346899999999999999999963 3578899999965432 2345678899999999 689999999987654
Q ss_pred CeEEEEEEecCCCCHHHHhhhCC---------------------------------------------------------
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSN--------------------------------------------------------- 483 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 483 (678)
...++||||+++|+|.++++...
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 46789999999999999986432
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecc
Q 005760 484 ---------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554 (678)
Q Consensus 484 ---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 554 (678)
..+++..+..++.|+++|++||| +++|+||||||+||+++.++.+|++|||++...............
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 13567788899999999999999 999999999999999999999999999999765333222222334
Q ss_pred cCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhH
Q 005760 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFV 633 (678)
Q Consensus 555 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (678)
.++..|+|||.+.+..++.++||||||+++|||++ |..||........ ......... ....+
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~~-----~~~~~----------- 304 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGT-----RMRAP----------- 304 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHHHhccC-----CCCCC-----------
Confidence 45678999999988889999999999999999997 8889865322211 111110000 00000
Q ss_pred HHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 634 AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 634 ~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
...++++.+++.+||+.||++||++.|+++.|+.+.+
T Consensus 305 --~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 305 --DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred --CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1123458899999999999999999999999998864
No 126
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.4e-37 Score=309.36 Aligned_cols=253 Identities=27% Similarity=0.447 Sum_probs=203.0
Q ss_pred hcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
.++|++.+.||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.+++.++||+++++++++.+ +..+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence 457889999999999999999988888899999875433 34678899999999999999999998754 5678999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++++|.++++... ..+++.++..++.|++.|++||| +.+++|+||+|+||++++++.++++|||.+........ .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc-c
Confidence 9999999997643 34789999999999999999999 89999999999999999999999999999976543221 1
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......++..|+|||...+..++.++||||||+++|||++ |..||.+....+ .........+ +.
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~~~--------~~----- 223 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--VLEQVERGYR--------MP----- 223 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHcCCC--------CC-----
Confidence 1223345678999999988889999999999999999999 888886532211 1111110000 00
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
.+...+..+.+++.+||+++|++|||+.++.+.|+.
T Consensus 224 -----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 -----CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -----CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 011234568899999999999999999999999875
No 127
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=330.92 Aligned_cols=257 Identities=26% Similarity=0.426 Sum_probs=219.6
Q ss_pred CCCCccccCCCceeEEEEEe-CCC----cEEEEEEeecc-cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 394 FSENNLIGRGSFGSVFKARL-GDG----MEVAMKVFNLQ-YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
....++||+|+||+||+|.+ .+| -+||+|++... ..+...++.+|+-.|.+++|||+++++++|...+ ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34568999999999999974 344 46899988544 3445688999999999999999999999998766 77999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
+|++.|+|.++++.++..+.....+.|..|||+||.||| .+++|||||.++|||+..-..|||.|||+++.....+.
T Consensus 777 q~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred HhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 999999999999999888999999999999999999999 99999999999999999999999999999999887776
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
........-.+.|||-|.+....|+.++|||||||++||++| |..|+++....+.. . ++
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~--d-----------------ll- 913 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP--D-----------------LL- 913 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh--H-----------------HH-
Confidence 666666677889999999999999999999999999999999 99998874433221 0 01
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSL 674 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~ 674 (678)
....++..+..|+-+++.+|.+||..|+..||+|+++...+.++-..-
T Consensus 914 e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 914 EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 111234455678999999999999999999999999999999886543
No 128
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.3e-37 Score=311.02 Aligned_cols=254 Identities=25% Similarity=0.430 Sum_probs=196.6
Q ss_pred CCCCccccCCCceeEEEEEeCC-Cc--EEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeec------CCe
Q 005760 394 FSENNLIGRGSFGSVFKARLGD-GM--EVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSN------EEF 462 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 462 (678)
|.+.+.||+|+||.||+|...+ +. .||+|.++... ....+.+..|+++++.++||||+++++++.. ...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999998643 33 58999886532 2345678889999999999999999997632 225
Q ss_pred EEEEEEecCCCCHHHHhhhC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeec
Q 005760 463 KALVLEYMPHGSLEKYLHSS-----NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg 537 (678)
.++++||+++|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999887432 234788999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcc
Q 005760 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPIST 616 (678)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (678)
+++...............+++.|+|||...+..++.++||||||+++|||++ |+.||...... .....+.... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~--~- 232 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQGN--R- 232 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCC--C-
Confidence 9987643322222223346678999999998899999999999999999999 78888653221 1111111100 0
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
... +..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 233 --~~~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 --LKQ-------------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --CCC-------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 012345588999999999999999999999999875
No 129
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.7e-37 Score=322.37 Aligned_cols=251 Identities=23% Similarity=0.300 Sum_probs=197.3
Q ss_pred CCCCCccccCCCceeEEEEEe----CCCcEEEEEEeeccc----CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeE
Q 005760 393 GFSENNLIGRGSFGSVFKARL----GDGMEVAMKVFNLQY----GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFK 463 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 463 (678)
+|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+..|+.+++.+ +||+|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999864 368899999986432 22345677899999999 499999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++||||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999999999997654 4888999999999999999999 9999999999999999999999999999997653
Q ss_pred CCCCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 544 REDQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 544 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.... .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||........ .......... .++
T Consensus 157 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~------~~~ 228 (332)
T cd05614 157 SEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILK------CDP 228 (332)
T ss_pred ccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhc------CCC
Confidence 3221 122345689999999998765 478899999999999999999999964322211 1111110000 001
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
.. +...+..+.+++.+||+.||++|| +++|+++
T Consensus 229 ~~----------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 229 PF----------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CC----------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 00 012345578999999999999999 7778875
No 130
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.6e-37 Score=329.64 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=197.3
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688999999999999999975 578999999986432 233466788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 9999999999997654 4788889999999999999999 99999999999999999999999999999864321100
Q ss_pred c---------------------------------------------ceeecccCCccccCccccCCCCCCccchHHHHHH
Q 005760 548 S---------------------------------------------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGI 582 (678)
Q Consensus 548 ~---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv 582 (678)
. .......||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 0001246899999999999889999999999999
Q ss_pred HHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCC---CC
Q 005760 583 MLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQR---IN 659 (678)
Q Consensus 583 ~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---ps 659 (678)
++|||++|..||......+ ...... .+.. .+.-|. ....+.++.+++.+|++ +|.+| ++
T Consensus 237 il~elltG~~Pf~~~~~~~-~~~~i~-~~~~----~~~~p~-----------~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 237 IMFECLIGWPPFCSENSHE-TYRKII-NWRE----TLYFPD-----------DIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred hhhhhhcCCCCCCCCCHHH-HHHHHH-ccCC----ccCCCC-----------CCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 9999999999996533211 111111 0000 000000 01134558899999998 67765 59
Q ss_pred HHHHHHH
Q 005760 660 AKEIVTK 666 (678)
Q Consensus 660 ~~ell~~ 666 (678)
+.|++..
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9998764
No 131
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-38 Score=324.57 Aligned_cols=253 Identities=24% Similarity=0.403 Sum_probs=210.7
Q ss_pred CCCccccCCCceeEEEEEeC--CC--cEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 395 SENNLIGRGSFGSVFKARLG--DG--MEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 395 ~~~~~ig~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
...++||+|.||+|++|.|. .| -.||||.++..... ...+|.+|+.+|.+|+|||++++||++.+ ....+|+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 34678999999999999875 34 34899999766443 66899999999999999999999999987 556799999
Q ss_pred cCCCCHHHHhhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC-CC
Q 005760 470 MPHGSLEKYLHS-SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DQ 547 (678)
Q Consensus 470 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~-~~ 547 (678)
++.|+|.+.+++ .+..+-....-.++.|||.|+.||. .+++||||+.++|+++.....|||+|||+.+-++.. +.
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 999999999988 4446777888889999999999999 999999999999999999999999999999988654 34
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
+.+.........|+|||.+....++.++|||+|||++|||++ |..||.+-.. ..+. +.+|
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--~qIL------------~~iD----- 329 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--IQIL------------KNID----- 329 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--HHHH------------Hhcc-----
Confidence 455667778889999999999999999999999999999999 7888865211 1111 1111
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
...++..+..|+++++++|++||..+|++||+|..+.+.+-..+
T Consensus 330 -~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 330 -AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred -ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 22234455689999999999999999999999999986554443
No 132
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1e-36 Score=312.65 Aligned_cols=261 Identities=24% Similarity=0.406 Sum_probs=201.1
Q ss_pred hcCCCCCccccCCCceeEEEEEeCC---------------CcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeee
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGD---------------GMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVI 454 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~ 454 (678)
.++|++.+.||+|+||.||++...+ ...||+|.++.... .....+.+|+++++.++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4689999999999999999986532 23489999865422 3346788999999999999999999
Q ss_pred eeeecCCeEEEEEEecCCCCHHHHhhhCC-----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCe
Q 005760 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSN-----------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNV 523 (678)
Q Consensus 455 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Ni 523 (678)
+++...+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhE
Confidence 99999999999999999999999986432 13678889999999999999999 99999999999999
Q ss_pred eecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc--CCCCCCcccCCc
Q 005760 524 LLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT--RKKPTDEIFNGE 601 (678)
Q Consensus 524 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~--g~~p~~~~~~~~ 601 (678)
++++++.+|++|||++................++..|+|||...++.++.++|||||||++|||++ |..||.......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 999999999999999976543322222334456778999999988889999999999999999998 556765432211
Q ss_pred cchhhhhhcccCCc-ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 602 MTLKHWVNDWLPIS-TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 602 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
........+.... ......+ ..+++.+.+++.+||+.||++||++.++++.|+
T Consensus 241 -~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 -VIENTGEFFRNQGRQIYLSQT-------------PLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred -HHHHHHHhhhhccccccCCCC-------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1111111000000 0000000 113456899999999999999999999999886
No 133
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.6e-37 Score=320.34 Aligned_cols=236 Identities=25% Similarity=0.325 Sum_probs=190.1
Q ss_pred ccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|..+ +++.||+|++.... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999864 68999999987532 23445667788888776 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...... .....
T Consensus 81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR-RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--GKTTS 154 (320)
T ss_pred chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--CCccc
Confidence 99999987665 4889999999999999999999 999999999999999999999999999998753221 12233
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...||+.|+|||.+.+..++.++||||+||++|||++|+.||......+ ....+ ... ....+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~~~~i---~~~---~~~~~---------- 216 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD--LFEAI---LND---EVVYP---------- 216 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--HHHHH---hcC---CCCCC----------
Confidence 4568999999999998899999999999999999999999997532211 11111 000 00011
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINA 660 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 660 (678)
...+.++.+++.+||+.||++||++
T Consensus 217 ---~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 217 ---TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred ---CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1134568899999999999999998
No 134
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.5e-37 Score=310.99 Aligned_cols=256 Identities=24% Similarity=0.449 Sum_probs=203.6
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CC---cEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DG---MEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
+.|++.+.||+|+||.||+|..+ ++ ..||+|.+.... ......+..|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 35778899999999999999854 33 369999986542 33456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+++++|.+++......+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+|++|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999999876666899999999999999999999 9999999999999999999999999999987654322
Q ss_pred Ccceeecc---cCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 547 QSTIQTQT---LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 547 ~~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
........ ..+..|+|||.+.+..++.++||||+||++||+++ |..||...... ....++....+
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~~~~~--------- 229 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIEQDYR--------- 229 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCCc---------
Confidence 11111111 12457999999998899999999999999999887 99998653221 11222111000
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
...+..++..+.+++.+||+.+|.+||++.+++..|+++
T Consensus 230 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 ---------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000123456688999999999999999999999998865
No 135
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.9e-37 Score=316.06 Aligned_cols=265 Identities=20% Similarity=0.280 Sum_probs=200.9
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|.+.+.||+|+||.||+|+.+ +++.||+|.++.... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57889999999999999999854 788999999875432 2334577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++ +|.+++......++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....... .
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT--K 159 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--c
Confidence 975 899888776666889999999999999999999 9999999999999999999999999999987543221 1
Q ss_pred eeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccC---Cccccc------
Q 005760 550 IQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP---ISTKEI------ 619 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~------ 619 (678)
......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+. .......... .....+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhhcchhhh
Confidence 1233457899999998765 4578999999999999999999999975432211 1111100000 000000
Q ss_pred ---ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 ---VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..+....... .......+.++.+++.+|++.||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 239 KNYNFPKYKPQPL--INHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhcCccCCCch--hhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000000 0011234667889999999999999999999986
No 136
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.9e-37 Score=329.72 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=195.3
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.|+..+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999975 478899999986532 2334677889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC-
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ- 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~- 547 (678)
|+++|+|.+++.+.+ .++...+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||++..+.....
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 999999999997654 4788888999999999999999 99999999999999999999999999999753211000
Q ss_pred --------------------------------------------cceeecccCCccccCccccCCCCCCccchHHHHHHH
Q 005760 548 --------------------------------------------STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 583 (678)
Q Consensus 548 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~ 583 (678)
........||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000123468999999999999899999999999999
Q ss_pred HHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC---H
Q 005760 584 LMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN---A 660 (678)
Q Consensus 584 l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps---~ 660 (678)
+|||++|+.||......+. ...... +.. ....|. ....++++.+++.+|+ .+|++|++ +
T Consensus 238 l~elltG~~Pf~~~~~~~~-~~~i~~-~~~----~~~~p~-----------~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLET-QMKVIN-WQT----SLHIPP-----------QAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred HHHHHhCCCCCCCCCHHHH-HHHHHc-cCC----CcCCCC-----------cccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 9999999999975332211 111100 000 000000 0123445778888876 59999997 8
Q ss_pred HHHHH
Q 005760 661 KEIVT 665 (678)
Q Consensus 661 ~ell~ 665 (678)
.|+++
T Consensus 300 ~ei~~ 304 (382)
T cd05625 300 DEIKA 304 (382)
T ss_pred HHHhc
Confidence 88764
No 137
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=7.3e-37 Score=307.17 Aligned_cols=247 Identities=23% Similarity=0.386 Sum_probs=196.5
Q ss_pred cccCCCceeEEEEEe---CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 399 LIGRGSFGSVFKARL---GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 399 ~ig~G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
.||+|+||.||+|.+ +++..+|+|+++.... ...+.+..|+.+++.++||||+++++++.. +..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999964 3678899999864432 245678899999999999999999998864 4678999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc-eee
Q 005760 474 SLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-IQT 552 (678)
Q Consensus 474 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~ 552 (678)
+|.+++.... .+++..+..++.|++.|++||| +++++||||||.||+++.++.+|++|||++.......... ...
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKNK-HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 9999997654 4889999999999999999999 9999999999999999999999999999997664332211 112
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIN 631 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (678)
...++..|+|||.+....++.++|||||||++|||++ |+.||...... .....+..... +.
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~~~~--------~~-------- 218 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIESGER--------ME-------- 218 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCCC--------CC--------
Confidence 2234578999999988889999999999999999998 99998753221 11122111000 00
Q ss_pred hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 632 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 632 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+..+++++.+++.+||+.||++||++.+|++.|+++
T Consensus 219 --~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 219 --CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 0113456688999999999999999999999999865
No 138
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.4e-37 Score=314.06 Aligned_cols=253 Identities=27% Similarity=0.352 Sum_probs=205.6
Q ss_pred HHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
.....+|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|||++++++.+...+..++|
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 34456899999999999999999985 47899999999766555567788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+++++|.+++... .+++.++..++.|++.|++||| +.+|+||||+|+||+++.++.+||+|||++.......
T Consensus 96 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 96 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred ecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 9999999999998754 3788999999999999999999 9999999999999999999999999999987543221
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
.......+++.|+|||.+.+..++.++|||||||++|+|++|+.||........ ....... .......
T Consensus 171 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~~~----~~~~~~~----- 238 (296)
T cd06654 171 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATN----GTPELQN----- 238 (296)
T ss_pred --cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHhcC----CCCCCCC-----
Confidence 112334688899999999888899999999999999999999999965332111 1111000 0000000
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+...+..+.+++.+||+++|++||++.|+++
T Consensus 239 --------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 239 --------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred --------ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 1123455889999999999999999999987
No 139
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.3e-37 Score=308.23 Aligned_cols=254 Identities=24% Similarity=0.422 Sum_probs=204.4
Q ss_pred hhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..++|++.++||+|+||.||+|..++++.||+|.+..... ..+.+.+|+.+++.++|||++++++++. .+..+++|||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 3567899999999999999999988899999999864432 3467889999999999999999999874 4568999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++++|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 99999999986533 35788999999999999999999 99999999999999999999999999999976542221
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.......++..|+|||.+....++.++||||||+++||+++ |+.||.+....+ .......... ..
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~--------~~---- 223 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQNLERGYR--------MP---- 223 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHHcCCC--------CC----
Confidence 12223445678999999988889999999999999999999 999987533211 1111110000 00
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
.+...+.++.+++.+||+.+|++||++++++..|+.
T Consensus 224 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 ------RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 001234568899999999999999999999999975
No 140
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=9.7e-37 Score=305.18 Aligned_cols=248 Identities=30% Similarity=0.494 Sum_probs=199.9
Q ss_pred ccccCCCceeEEEEEeCCCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCHH
Q 005760 398 NLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLE 476 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 476 (678)
+.||+|+||.||+|...+++.||+|.+...... ....+..|+++++.++||||+++++++.+.+..++|+||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 479999999999998766999999998654333 4567889999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccC
Q 005760 477 KYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556 (678)
Q Consensus 477 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 556 (678)
+++......+++..+..++.+++.|++||| +.+++||||+|+||+++.++.+||+|||.+.................
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 999776556889999999999999999999 99999999999999999999999999999876532211111122334
Q ss_pred CccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHH
Q 005760 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK 635 (678)
Q Consensus 557 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (678)
+..|+|||.+.++.++.++|+||+||++|||++ |..||....... ....+.... ... .+
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--~~~~~~~~~-----~~~-------------~~ 217 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--TRERIESGY-----RMP-------------AP 217 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--HHHHHhcCC-----CCC-------------CC
Confidence 567999999988889999999999999999999 788876533211 111111000 000 01
Q ss_pred HHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 636 EQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 636 ~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
..++.++.+++.+||+.+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 123456899999999999999999999999886
No 141
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.6e-37 Score=306.51 Aligned_cols=248 Identities=25% Similarity=0.430 Sum_probs=196.4
Q ss_pred cccCCCceeEEEEEeC---CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCC
Q 005760 399 LIGRGSFGSVFKARLG---DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGS 474 (678)
Q Consensus 399 ~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 474 (678)
.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+.+++.++||||+++++++.. +..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 4899999999999753 456799999865432 234668899999999999999999998864 56789999999999
Q ss_pred HHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc-eeec
Q 005760 475 LEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-IQTQ 553 (678)
Q Consensus 475 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~ 553 (678)
|.+++......+++..+..++.|++.|++||| +++++||||||+||+++.++.+|++|||++.......... ....
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99999866666899999999999999999999 9999999999999999999999999999997554322211 1122
Q ss_pred ccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 554 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 554 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
..++..|+|||.+....++.++|||||||++||+++ |+.||......+ ....+..... +.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~--------~~--------- 218 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VMSFIEQGKR--------LD--------- 218 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHHCCCC--------CC---------
Confidence 234578999999888889999999999999999996 999987533221 1111111000 00
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+..+++++.+++.+||+.+|++||++.++.+.|+.+
T Consensus 219 -~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 -CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 0112456788999999999999999999999999875
No 142
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-37 Score=322.18 Aligned_cols=241 Identities=24% Similarity=0.317 Sum_probs=194.1
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+.||+|+||.||+|.. .+|+.||+|++.... ......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999975 578999999997542 223456678999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 474 SLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 474 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
+|.+++.... .+++..+..++.||+.||+||| + ++|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~ 154 (325)
T cd05594 81 ELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMK 154 (325)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cccc
Confidence 9999887654 4889999999999999999999 7 799999999999999999999999999987532221 1123
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+. .. ...-+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i~---~~---~~~~p---------- 216 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELIL---ME---EIRFP---------- 216 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHHHh---cC---CCCCC----------
Confidence 356899999999999889999999999999999999999999653221 1111100 00 00000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
...++++.+++.+||+.||++|+ ++.|+++
T Consensus 217 ---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 217 ---RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred ---CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 12345688999999999999997 8999875
No 143
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.1e-36 Score=305.68 Aligned_cols=250 Identities=28% Similarity=0.387 Sum_probs=206.2
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
.++|+..+.||+|+||.||+|... +++.+++|.+..... .+.+.+|+++++.++||||+++++++.+....++++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 467899999999999999999865 488999999875432 57889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++......+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++....... .
T Consensus 80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--~ 154 (256)
T cd06612 80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--A 154 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCc--c
Confidence 9999999999876667899999999999999999999 9999999999999999999999999999987654322 1
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||........... .... ..+
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~--~~~~--------~~~------- 217 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM--IPNK--------PPP------- 217 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh--hccC--------CCC-------
Confidence 22334578899999999888899999999999999999999999875332211100 0000 000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....+..++.++.+++.+||+.||++||++.|+++
T Consensus 218 -~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 218 -TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred -CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00112234567899999999999999999999985
No 144
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.8e-37 Score=309.25 Aligned_cols=256 Identities=26% Similarity=0.466 Sum_probs=204.6
Q ss_pred cCCCCCccccCCCceeEEEEEeC----CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
.+|++.+.||+|+||.||+|... .+..+|+|.++... ....+.+..|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888999999999999999753 23479999986432 23346788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||++.......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999876666899999999999999999999 9999999999999999999999999999998664332
Q ss_pred Ccce-eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 547 QSTI-QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 547 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
.... .....++..|+|||.+.+..++.++|+||||+++||+++ |..||...... .....+..... . +
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~~-----~--~-- 229 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEGYR-----L--P-- 229 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCCCc-----C--C--
Confidence 2111 122233568999999998889999999999999999887 99998653221 11111111000 0 0
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
....+++.+.+++.+||+.+|.+||++.++++.|+++
T Consensus 230 ---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 230 ---------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ---------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0012345688999999999999999999999999875
No 145
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=9e-37 Score=340.25 Aligned_cols=260 Identities=25% Similarity=0.354 Sum_probs=204.8
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|... +|+.||+|++..... ...+++.+|+++++.++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999854 689999999864322 23467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeec
Q 005760 468 EYMPHGSLEKYLHSS----------NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537 (678)
Q Consensus 468 e~~~~~~L~~~l~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg 537 (678)
||+++++|.+++... ....++..+..++.||++||+||| +++|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998642 123456778899999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCC----------------cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc
Q 005760 538 IAKLLTREDQ----------------STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE 601 (678)
Q Consensus 538 ~~~~~~~~~~----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~ 601 (678)
++........ ........||+.|+|||.+.+..++.++||||+||++|||++|+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9976521110 011123468999999999999999999999999999999999999996532221
Q ss_pred cchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCC-CHHHHHHHHHHHHH
Q 005760 602 MTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRI-NAKEIVTKLLKIRD 672 (678)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~ell~~L~~~~~ 672 (678)
..... ...++... ......++.+.+++.+|++.||++|| +++++++.|+.+.+
T Consensus 239 i~~~~-----------~i~~P~~~-------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYRD-----------VILSPIEV-------APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhhh-----------hccChhhc-------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11110 00111100 01123456688999999999999996 67778888877644
No 146
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-37 Score=306.70 Aligned_cols=249 Identities=24% Similarity=0.326 Sum_probs=209.5
Q ss_pred hhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
+.+-|.+.+.||+|.|++|-+|+ .-+|..||||++....- -....+.+|++.|+.++|||||++|++......+|+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 45568889999999999999997 45899999999976543 2456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee-cCCCcEEEEeeccccccCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL-DDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill-~~~~~~kl~Dfg~~~~~~~~ 545 (678)
+|.-++|+|.+|+-++...+.+.-..+++.||+.|+.|+| +.++||||+||+||.+ ..-|-||++|||++..+.+
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P- 171 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP- 171 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCC-
Confidence 9999999999999988888999999999999999999999 9999999999999976 5779999999999976643
Q ss_pred CCcceeecccCCccccCccccCCCCCC-ccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVS-ANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
...-+..+|+..|.|||++.+..|+ +++||||+||+||.+++|+.||......+. +..++|-..
T Consensus 172 --G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------------LTmImDCKY 236 (864)
T KOG4717|consen 172 --GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------------LTMIMDCKY 236 (864)
T ss_pred --cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------------hhhhhcccc
Confidence 3334567899999999999999986 678999999999999999999976333221 122233221
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+.-.+.++.+||..|++.||.+|.+.+||+.
T Consensus 237 t--------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 T--------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred c--------CchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 1 12234566889999999999999999999874
No 147
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.9e-37 Score=320.35 Aligned_cols=241 Identities=23% Similarity=0.315 Sum_probs=193.1
Q ss_pred ccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|+.+ +++.||+|++.... ....+.+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999854 68899999997542 23345567788888865 799999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
++|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTTT 154 (321)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCC--cccc
Confidence 99999987665 4888899999999999999999 9999999999999999999999999999987543221 2233
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...|++.|+|||++.+..++.++||||+||++|||++|+.||......+ ........ ....|.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-~~~~i~~~-------~~~~p~--------- 217 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-LFESILHD-------DVLYPV--------- 217 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-HHHHHHcC-------CCCCCC---------
Confidence 4568999999999998899999999999999999999999997533211 11111100 000111
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCC-------CHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRI-------NAKEIVT 665 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rp-------s~~ell~ 665 (678)
.++.++.+++.+||+.||++|| ++.++++
T Consensus 218 ----~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 218 ----WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ----CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 1345688999999999999999 7777764
No 148
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=314.93 Aligned_cols=252 Identities=24% Similarity=0.313 Sum_probs=211.0
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCc---hhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 464 (678)
....|++.+.||.|.||.||+++.+ +|+.+|+|++...... ..+.+.+|+++|+++. |||||.+.+.|++.+..+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 4567889999999999999999855 6999999999765432 3468899999999998 999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC----CCcEEEEeecccc
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD----NMVAHLSDFGIAK 540 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~----~~~~kl~Dfg~~~ 540 (678)
+|||++.||.|.+.+... ..++..+..++.|++.++.||| +.||+|||+||+|+++.. ++.+|++|||++.
T Consensus 113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 999999999999999876 3899999999999999999999 999999999999999953 3589999999998
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccc
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (678)
.... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||.+........ ......+ .+.
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i~~~~~-----~f~ 258 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AILRGDF-----DFT 258 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HHHcCCC-----CCC
Confidence 8754 445567889999999999999999999999999999999999999998755433222 1111100 011
Q ss_pred cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 621 DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
+ ......+..+.+++..|+..||.+|+++.++++.
T Consensus 259 ~-----------~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 259 S-----------EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred C-----------CCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1 1123456678899999999999999999999873
No 149
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=7.8e-37 Score=309.40 Aligned_cols=258 Identities=25% Similarity=0.408 Sum_probs=205.5
Q ss_pred hcCCCCCccccCCCceeEEEEEeCC----CcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGD----GMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
.++|.+.+.||+|+||.||+|...+ ...||+|...... ....+.+.+|+.+++.++||||+++++++.+ +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3568888999999999999997532 3568999886543 3345678899999999999999999998876 45689
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||+++++|.+++......+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+|++|||++......
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 84 VMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 99999999999999876656899999999999999999999 999999999999999999999999999998765432
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
. ........++..|+|||.+....++.++||||||+++||+++ |..||......+.. ....... ...
T Consensus 161 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~~~~~~~------~~~---- 228 (270)
T cd05056 161 S-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI-GRIENGE------RLP---- 228 (270)
T ss_pred c-ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHcCC------cCC----
Confidence 2 112223345568999999888889999999999999999996 99998654332111 1110000 000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.+..++..+.+++.+|+..+|++|||+.|+++.|+++++.
T Consensus 229 ---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 229 ---------MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0113455688999999999999999999999999998753
No 150
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.4e-37 Score=330.28 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=197.6
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+++++.++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 4688999999999999999985 478999999986432 223456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC-
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED- 546 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~- 546 (678)
||+++|+|.+++...+ .++...+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 81 DYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 9999999999997765 4788888899999999999999 9999999999999999999999999999975331000
Q ss_pred ----------------------------------------CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHH
Q 005760 547 ----------------------------------------QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLME 586 (678)
Q Consensus 547 ----------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~e 586 (678)
.........||+.|+|||++.+..++.++||||+||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 0000123469999999999999899999999999999999
Q ss_pred HHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCC---CHHHH
Q 005760 587 TFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRI---NAKEI 663 (678)
Q Consensus 587 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp---s~~el 663 (678)
|++|+.||......+.. ..+..+... ...+. ....++++.+++.+|+ .+|.+|+ ++.|+
T Consensus 237 ll~G~~Pf~~~~~~~~~--~~i~~~~~~----~~~~~-----------~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 237 MLVGQPPFLADTPAETQ--LKVINWETT----LHIPS-----------QAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred hhhCCCCCCCCCHHHHH--HHHhccCcc----ccCCC-----------CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999763322111 111111000 00000 0123445778888876 5999999 88998
Q ss_pred HHH
Q 005760 664 VTK 666 (678)
Q Consensus 664 l~~ 666 (678)
++.
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 753
No 151
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.1e-37 Score=313.72 Aligned_cols=259 Identities=24% Similarity=0.405 Sum_probs=203.0
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF 462 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 462 (678)
..++|++.+.||+|+||.||+|..+ .+..||+|.+..... .....+.+|+.+++.++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999643 245799998754322 233467789999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEE
Q 005760 463 KALVLEYMPHGSLEKYLHSSN---------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHL 533 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl 533 (678)
.++||||+++|+|.++++... ...+...+..++.|++.|+.||| +++++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999997532 23456778889999999999999 999999999999999999999999
Q ss_pred EeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhccc
Q 005760 534 SDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWL 612 (678)
Q Consensus 534 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 612 (678)
+|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||...... .....+.
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~~~~~~~--- 235 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM--- 235 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH---
Confidence 99999875543222222233345678999999988889999999999999999998 78888653221 1111110
Q ss_pred CCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 613 PISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
+..... .+..+++.+.+++.+||+.||++|||+.|+++.|++..
T Consensus 236 --------~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 --------DGGYLD-------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred --------cCCCCC-------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 000000 01123456899999999999999999999999988753
No 152
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.8e-37 Score=326.11 Aligned_cols=254 Identities=22% Similarity=0.278 Sum_probs=200.3
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
..++|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3567999999999999999999854 78999999986431 2233557789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||+++|+|.+++.... ++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~~~~--l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSNYD--IPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999997653 778888899999999999999 999999999999999999999999999999765432
Q ss_pred CCcceeecccCCccccCccccCCC----CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEG----RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
.. .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .......... .+..
T Consensus 196 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~~-----~~~~ 268 (370)
T cd05596 196 GM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMDHKN-----SLTF 268 (370)
T ss_pred Cc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-HHHHHHcCCC-----cCCC
Confidence 21 122345699999999987653 47889999999999999999999997532211 1111111000 0000
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQ--RINAKEIVTK 666 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~ell~~ 666 (678)
+ ....++.++.+++.+|++.+|.+ |+++.|+++.
T Consensus 269 ~-----------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 269 P-----------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred C-----------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 01123556889999999999988 9999999753
No 153
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.6e-37 Score=305.35 Aligned_cols=247 Identities=30% Similarity=0.465 Sum_probs=198.5
Q ss_pred ccccCCCceeEEEEEeCCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCHH
Q 005760 398 NLIGRGSFGSVFKARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLE 476 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 476 (678)
+.||+|+||.||+|...++..+|+|.+..... .....+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999865432 23456888999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccC
Q 005760 477 KYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLA 556 (678)
Q Consensus 477 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 556 (678)
+++......+++..+..++.|++.|+.|+| +++++|+||+|+||+++.++.+|++|||++....... ........+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI-YSSSGLKQI 156 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccc-cccCCCCCC
Confidence 999876656889999999999999999999 9999999999999999999999999999986543221 111122334
Q ss_pred CccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHH
Q 005760 557 TIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK 635 (678)
Q Consensus 557 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (678)
+..|+|||+..++.++.++||||||+++||+++ |..||........ ...+.... ... .+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~--~~~~~~~~--------~~~----------~~ 216 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA--REQVEKGY--------RMS----------CP 216 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH--HHHHHcCC--------CCC----------CC
Confidence 577999999988889999999999999999998 8889865322211 11111000 000 00
Q ss_pred HHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 636 EQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 636 ~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
..++.++.+++.+||+.+|++||++.|+++.|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 123456889999999999999999999999875
No 154
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.2e-37 Score=308.47 Aligned_cols=255 Identities=28% Similarity=0.487 Sum_probs=206.5
Q ss_pred hhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..++|.+.+.||+|+||.||+|..++++.||+|.+.... ...+++.+|+.+++.++|||++++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 457899999999999999999998788889999987433 2346788999999999999999999999988899999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.+++.... ..+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++++|||.++...... .
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-Y 158 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchh-h
Confidence 99999999997643 45889999999999999999999 9999999999999999999999999999987654321 1
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
........+..|+|||.+.+..++.++||||+|+++||+++ |+.||.+.... ........... ...
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~~~~~~~------~~~------ 225 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVLEQVERGYR------MPR------ 225 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCC------CCC------
Confidence 11223335678999999998889999999999999999998 89998653221 11111111000 000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
+..++.++.+++.+|++.+|++||+++|+.+.|+.
T Consensus 226 -------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 226 -------PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 01124568899999999999999999999999875
No 155
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=8.1e-37 Score=308.94 Aligned_cols=257 Identities=28% Similarity=0.495 Sum_probs=204.5
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CC---cEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DG---MEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
.++|+..+.||+|+||.||+|..+ ++ ..+|+|.+.... ....+.+..|+++++.++|||++++.+++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356788899999999999999854 33 379999986542 2335678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||+++++|.+++......+++..+..++.|++.|++||| +.+++|+||||+||+++.++.+|++|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999999876566899999999999999999999 999999999999999999999999999999765432
Q ss_pred CCcce-eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCc
Q 005760 546 DQSTI-QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 623 (678)
Q Consensus 546 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (678)
..... ......+..|+|||.+....++.++|||||||++|||++ |+.||...... .....+.... ..+
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~~~i~~~~-------~~~- 230 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVMKAINDGF-------RLP- 230 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHHHHhcCC-------CCC-
Confidence 21111 112223457999999988889999999999999999998 99998653221 1111111000 000
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 624 LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
....++.++.+++.+||+.+|++||++.++++.|+++
T Consensus 231 ----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 231 ----------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0112455688999999999999999999999999875
No 156
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.2e-37 Score=319.63 Aligned_cols=241 Identities=22% Similarity=0.268 Sum_probs=192.7
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCc-cceeeeeeeecCCeEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHR-NIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~ 467 (678)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|.++++.++|+ +|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999854 67899999997532 23446677899999998765 5888899999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~- 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG- 155 (324)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-
Confidence 9999999999997654 4788999999999999999999 9999999999999999999999999999986432211
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+... . ..-+
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~~~i~~~---~---~~~~----- 221 (324)
T cd05587 156 -KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--LFQSIMEH---N---VSYP----- 221 (324)
T ss_pred -CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHHcC---C---CCCC-----
Confidence 12234568999999999999899999999999999999999999997533211 11111100 0 0000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 660 (678)
...+.++.+++.+||+.||.+|+++
T Consensus 222 --------~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 --------KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1134557899999999999999976
No 157
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.2e-37 Score=318.12 Aligned_cols=240 Identities=24% Similarity=0.330 Sum_probs=189.2
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHh-CCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKS-IRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|.. .+++.||+|+++... ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999985 468899999997542 2233445566666664 4899999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cccc
Confidence 99999997655 4888999999999999999999 9999999999999999999999999999997543222 2233
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...||+.|+|||.+.+..++.++||||+||++|||++|+.||.+....+ ....+.. . .+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~--~~~~i~~---~------~~~~-------- 215 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE--LFDSILN---D------RPHF-------- 215 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHc---C------CCCC--------
Confidence 4568999999999998889999999999999999999999997532211 1110100 0 0000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHH-HHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAK-EIV 664 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-ell 664 (678)
+..++.++.+++.+||+.||++||++. +++
T Consensus 216 --~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 216 --PRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred --CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 011345578999999999999999875 443
No 158
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1e-36 Score=306.87 Aligned_cols=248 Identities=32% Similarity=0.538 Sum_probs=203.5
Q ss_pred ccccCCCceeEEEEEeCC----CcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLGD----GMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|.... +..|++|.+...... ..+.+.+|+++++.++|+|++++++++.+.+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 479999999999998643 888999998755433 367888999999999999999999999999999999999999
Q ss_pred CCHHHHhhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 473 GSLEKYLHSS--------NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 473 ~~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
++|.+++... ...+++..+..++.|++.|++||| +++++|+||+|+||+++.++.++++|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999876 356899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 623 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (678)
...........++..|+|||......++.++||||+|+++|||++ |..||...... ........ ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~-----------~~ 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVLEYLRK-----------GY 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHc-----------CC
Confidence 432233445567889999999988889999999999999999999 68898764221 11111110 00
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 624 LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
. ...+..++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 225 ~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 R-------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred C-------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0 0011233567899999999999999999999998874
No 159
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.6e-36 Score=305.76 Aligned_cols=252 Identities=24% Similarity=0.359 Sum_probs=201.4
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC-----chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG-----RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
++|.+.+.||+|++|.||+|.. .+++.||+|.+..... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788999999999999999975 4789999999864321 123567889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
|+||+++++|.+++.... .++...+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||+++.....
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 999999999999997654 4788888999999999999999 999999999999999999999999999998765322
Q ss_pred CCcc-eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 546 DQST-IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 546 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
.... ......++..|+|||.+.+..++.++||||+|+++|||++|+.||........ .... .... ..+.
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~-~~~~-------~~~~- 227 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA-IFKI-ATQP-------TNPQ- 227 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH-HHHH-hccC-------CCCC-
Confidence 1111 11234577899999999998899999999999999999999999865322111 1110 0000 0000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.+..++.++.+++.+||+.+|.+||++.|+++.
T Consensus 228 ---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 228 ---------LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---------CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 011244568899999999999999999999864
No 160
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=6.1e-37 Score=315.35 Aligned_cols=257 Identities=28% Similarity=0.460 Sum_probs=201.5
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCc--EEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGM--EVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 465 (678)
.++|++.+.||+|+||.||+|..+ ++. .+|+|.+.... ......+.+|++++.++ +||||+++++++.+.+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 467888999999999999999854 454 45777765332 23446788899999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCc
Q 005760 466 VLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMV 530 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~ 530 (678)
|+||+++++|.++++... ..+++..+..++.|++.|++||| +++++||||||+||+++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCc
Confidence 999999999999997543 24688899999999999999999 999999999999999999999
Q ss_pred EEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhh
Q 005760 531 AHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 531 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~ 609 (678)
+||+|||++..... .........+..|+|||.+.+..++.++|||||||++|||++ |..||......+ ......
T Consensus 163 ~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~ 237 (303)
T cd05088 163 AKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKLP 237 (303)
T ss_pred EEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--HHHHHh
Confidence 99999999853211 111122234667999999888889999999999999999998 999986532211 111111
Q ss_pred cccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 610 DWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
... ... .+..+++++.+++.+||+.+|++||++.+++..|+++...
T Consensus 238 ~~~--------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 238 QGY--------RLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred cCC--------cCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 000 000 0012345688999999999999999999999999988654
No 161
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.6e-37 Score=316.02 Aligned_cols=261 Identities=28% Similarity=0.427 Sum_probs=205.0
Q ss_pred hcCCCCCccccCCCceeEEEEEeC--------CCcEEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecC
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG--------DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNE 460 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 460 (678)
.++|.+.+.||+|+||.||+|... .+..+|+|.+.... ......+..|+++++.+ +||||+++++++.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 467888999999999999999641 24568999986432 23446688899999999 699999999999998
Q ss_pred CeEEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL 525 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill 525 (678)
+..++||||+++|+|.+++.... ..+++..+..++.|++.|+.||| +++++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEE
Confidence 89999999999999999997532 24788889999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccch
Q 005760 526 DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTL 604 (678)
Q Consensus 526 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~ 604 (678)
+.++.+|++|||.++...............++..|+|||.+.++.++.++|||||||++|||++ |..||...... ..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~ 245 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--EL 245 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 9999999999999976543222221222234567999999988889999999999999999999 88888653211 11
Q ss_pred hhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHH
Q 005760 605 KHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSL 674 (678)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~ 674 (678)
......... .. .+..++.++.+++.+||+.+|++||++.|+++.|+++....
T Consensus 246 ~~~~~~~~~--------~~----------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 246 FKLLREGHR--------MD----------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHHHHcCCC--------CC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 111110000 00 01123456889999999999999999999999999987643
No 162
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.4e-36 Score=306.81 Aligned_cols=245 Identities=23% Similarity=0.300 Sum_probs=192.6
Q ss_pred ccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 400 ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
||+|+||.||++.. .+|+.||+|.+.... ......+..|+++++.++||||+++.+++.+....++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999985 479999999986422 11234456799999999999999999999999999999999999999
Q ss_pred HHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecc
Q 005760 476 EKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554 (678)
Q Consensus 476 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 554 (678)
.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++...... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~~~ 154 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---KTITQR 154 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC---ceeecc
Confidence 98886543 35888899999999999999999 999999999999999999999999999998765322 122345
Q ss_pred cCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHH
Q 005760 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVA 634 (678)
Q Consensus 555 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (678)
.++..|+|||++.+..++.++||||+||++|||++|+.||....... ........... ..... .
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~--------~~~~~-------~ 218 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTLE--------DEVKF-------E 218 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhhc--------ccccc-------c
Confidence 68999999999988889999999999999999999999986532211 11111110000 00000 0
Q ss_pred HHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 635 KEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 635 ~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
...++.++.+++.+||++||++||++.|+++.
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 01245568899999999999999999776643
No 163
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.3e-36 Score=309.27 Aligned_cols=244 Identities=24% Similarity=0.293 Sum_probs=193.0
Q ss_pred ccCCCceeEEEEEe-CCCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 400 ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
||+|+||+||++.. .+++.||+|.+..... ...+.+..|+++++.++||||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999975 4789999999864321 2335667899999999999999999999999999999999999999
Q ss_pred HHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 476 EKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 476 ~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
.+++.. ....+++..+..++.|++.|++||| +++|+||||||+||+++.++.++|+|||++........ ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 988753 2235889999999999999999999 99999999999999999999999999999976543221 123
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...+++.|+|||.+.+..++.++||||+||++|||++|+.||........ .......... .+.
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~-------~~~--------- 218 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRILN-------DSV--------- 218 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHHHhhcc-------cCC---------
Confidence 45689999999999999999999999999999999999999965322111 1111110000 000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
..+..++.++.+++.+||+.||++|| +++|+++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 00112456688999999999999999 6777775
No 164
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.9e-37 Score=312.14 Aligned_cols=255 Identities=25% Similarity=0.414 Sum_probs=203.1
Q ss_pred hcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFK 463 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 463 (678)
.++|++.+.||+|+||.||+|... ++..||+|.+..... .....+.+|+++++.++||||+++++++...+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 467888999999999999999753 347899999864422 3345678899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEE
Q 005760 464 ALVLEYMPHGSLEKYLHSSN---------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS 534 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~ 534 (678)
++||||+++++|.+++.... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence 99999999999999986532 23678889999999999999999 9999999999999999999999999
Q ss_pred eeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccC
Q 005760 535 DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLP 613 (678)
Q Consensus 535 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~ 613 (678)
|||+++...............++..|+|||.+.++.++.++|||||||++||+++ |..||......+ ...+....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~~~~-- 237 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--VLKFVIDG-- 237 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--HHHHHhcC--
Confidence 9999876544332222334456788999999988889999999999999999998 888886432211 11111100
Q ss_pred CcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
.. +. .+..++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 238 -~~-----~~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 238 -GH-----LD----------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -CC-----CC----------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 00 00 00123456889999999999999999999999886
No 165
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.7e-36 Score=311.21 Aligned_cols=262 Identities=23% Similarity=0.427 Sum_probs=201.8
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-----------------CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCcccee
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-----------------DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIK 452 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 452 (678)
.++|++.+.||+|+||.||++... ++..||+|++.... .....++.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 457999999999999999998532 24468999986543 234567889999999999999999
Q ss_pred eeeeeecCCeEEEEEEecCCCCHHHHhhhCCC----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCC
Q 005760 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNY----------ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSN 522 (678)
Q Consensus 453 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~N 522 (678)
+++++...+..++||||+++++|.+++..... .+++..+..++.|++.|++||| +.+++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhe
Confidence 99999999999999999999999999976431 3567789999999999999999 9999999999999
Q ss_pred eeecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc--CCCCCCcccCC
Q 005760 523 VLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT--RKKPTDEIFNG 600 (678)
Q Consensus 523 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~--g~~p~~~~~~~ 600 (678)
|+++.++.++++|||++..+.........+...++..|+|||...++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 9999999999999999976543322222333445678999998888889999999999999999998 67787543221
Q ss_pred ccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
+. . .....+..........+ .+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 241 ~~-~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 QV-I-ENTGEFFRDQGRQVYLP-----------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HH-H-HHHHHHHhhccccccCC-----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11 0 00000000000000000 01124466889999999999999999999999886
No 166
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.5e-37 Score=318.97 Aligned_cols=241 Identities=23% Similarity=0.301 Sum_probs=189.3
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|.. .+++.||+|++.... ......+..|+.++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999985 478899999997542 23345577888888776 799999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|..++.... .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--Cccc
Confidence 99999887654 4889999999999999999999 9999999999999999999999999999987532211 1223
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCcc---chhhhhh-cccCCcccccccCccCCcc
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEM---TLKHWVN-DWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~ 628 (678)
...||+.|+|||++.+..++.++||||+||++|||++|+.||........ ....+.. ...... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---~~-------- 223 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---IR-------- 223 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---CC--------
Confidence 45689999999999999999999999999999999999999964221111 1111110 000000 00
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINA 660 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 660 (678)
.+...+.++.+++.+||+.||++||++
T Consensus 224 -----~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 -----IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -----CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 001234557899999999999999984
No 167
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-38 Score=288.84 Aligned_cols=251 Identities=26% Similarity=0.363 Sum_probs=203.5
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--------chhhhHHHHHHHHHhC-CCccceeeeeeeecC
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--------RVFKSFDVECEMMKSI-RHRNIIKVISSCSNE 460 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 460 (678)
-..|.-.+.+|.|..++|.+... ++|...|+|++..... +..++-.+|+.+++++ .||+|+++.++++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 45677788999999999998864 5788999999854321 2345567899999998 599999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
...++|+|.++.|.|.|++...-. +++....+|++|+.+|++||| .+.|||||+||+|||+|++.++||+|||+++
T Consensus 96 sF~FlVFdl~prGELFDyLts~Vt-lSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVT-LSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFAC 171 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhee-ecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceee
Confidence 999999999999999999987654 888999999999999999999 9999999999999999999999999999998
Q ss_pred ccCCCCCcceeecccCCccccCccccCC------CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCC
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKE------GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI 614 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 614 (678)
.+.+. ..-...+|||+|+|||.+.- ..|+..+|+||+||+||-++.|.+||.--... .....+
T Consensus 172 ~l~~G---ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm--lMLR~I------ 240 (411)
T KOG0599|consen 172 QLEPG---EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM--LMLRMI------ 240 (411)
T ss_pred ccCCc---hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH--HHHHHH------
Confidence 87543 33456789999999998752 35788899999999999999999998641110 000000
Q ss_pred cccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 615 STKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..+.......+..+++....+++.+|++.||.+|.|++|++.
T Consensus 241 ---------meGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 241 ---------MEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred ---------HhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 011122223344567788999999999999999999999986
No 168
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-36 Score=307.07 Aligned_cols=253 Identities=26% Similarity=0.379 Sum_probs=201.3
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
.++|.+.+.||+|+||.||+|.. .+++.||+|+++.........+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 45788889999999999999975 57899999998766555556678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++...+ .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--~~ 161 (267)
T cd06645 88 CGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--IA 161 (267)
T ss_pred cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc--cc
Confidence 99999999987655 4889999999999999999999 999999999999999999999999999998765322 11
Q ss_pred eeecccCCccccCccccC---CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 550 IQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
......++..|+|||.+. .+.++.++||||+||++|+|++|+.||....+...... .... ....+....
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~-~~~~-------~~~~~~~~~ 233 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL-MTKS-------NFQPPKLKD 233 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHh-hhcc-------CCCCCcccc
Confidence 223456889999999874 45588899999999999999999999865332211110 0000 000000000
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...++..+.+++.+||+.+|++||++.++++
T Consensus 234 --------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 234 --------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred --------cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0112345789999999999999999999875
No 169
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.5e-37 Score=310.32 Aligned_cols=262 Identities=25% Similarity=0.404 Sum_probs=208.3
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCc----EEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGM----EVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
..+|++.+.||+|+||.||+|..+ +|. .+|+|....... .....+.+|+.+++.++|||++++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 357888899999999999999853 333 589998765432 344678889999999999999999999887 7889
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+|+||+++|+|.+++......+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||.++....
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999999887666899999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 623 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (678)
...........++..|+|||......++.++|+||||+++||+++ |+.||...... ...+.+.... ....+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~-----~~~~~- 233 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEKGE-----RLPQP- 233 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhCCC-----CCCCC-
Confidence 332222222334568999999988889999999999999999999 99998753221 1111111100 00000
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHHhh
Q 005760 624 LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSLLR 676 (678)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~~~ 676 (678)
..++.++.+++.+||..+|.+||++.++++.|+.+.+.-.|
T Consensus 234 ------------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~ 274 (279)
T cd05057 234 ------------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQR 274 (279)
T ss_pred ------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCcc
Confidence 11334578999999999999999999999999998665433
No 170
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.4e-36 Score=304.83 Aligned_cols=249 Identities=26% Similarity=0.382 Sum_probs=202.8
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|++.+.||+|++|.||+|..+ +++.|++|.+... .......+..|+++++.++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777899999999999999854 7899999998643 233456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.++++.. ...+++..++.++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 9999999999875 346889999999999999999999 99999999999999999999999999999876643221
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......+++.|+|||+..++.++.++|+||||+++|||++|+.||....... .......... +..
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~---------~~~---- 221 (256)
T cd08529 157 -FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-LILKIIRGVF---------PPV---- 221 (256)
T ss_pred -hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCC---------CCC----
Confidence 1233457889999999999889999999999999999999999986533211 0111100000 000
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
...++.++.+++.+||+.+|++||++.|+++.
T Consensus 222 ------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 222 ------SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ------ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 01244568899999999999999999999863
No 171
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1e-36 Score=310.81 Aligned_cols=251 Identities=22% Similarity=0.298 Sum_probs=199.6
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
+|++.+.||+|+||.||++.. .+++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 477889999999999999985 478999999986432 1223456789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++++|.+++.... ..+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 999999998886543 35889999999999999999999 9999999999999999999999999999987653221
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......++..|+|||.+.+..++.++||||+||++|||++|+.||.+.... ............. ...
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~~---------~~~- 223 (285)
T cd05605 157 --TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVERRVKED---------QEE- 223 (285)
T ss_pred --ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHHHhhhc---------ccc-
Confidence 122346899999999998888999999999999999999999999753221 1111111100000 000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK 666 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~~ 666 (678)
.+...+..+.+++.+||+.||++|| ++.++++.
T Consensus 224 ------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 224 ------YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ------cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0112455688999999999999999 88888653
No 172
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.1e-36 Score=303.53 Aligned_cols=254 Identities=26% Similarity=0.391 Sum_probs=206.9
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
.++|++.+.||+|+||.||+|.. .+++.+++|++........+.+..|+++++.++||||+++++++.+.+..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 46788999999999999999985 46788999999866555667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++......++...+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 156 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--A 156 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh--h
Confidence 9999999999876556899999999999999999999 9999999999999999999999999999987654321 1
Q ss_pred eeecccCCccccCccccCCC---CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 550 IQTQTLATIGYMAPEYGKEG---RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
......++..|+|||...+. .++.++||||+|+++|||++|+.||........... .... . ..+..
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~-~~~~-------~-~~~~~-- 225 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL-ISKS-------N-FPPPK-- 225 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhc-------c-CCCcc--
Confidence 22345678899999998776 788999999999999999999999865332211110 0000 0 00000
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.......+.++.+++.+||+.+|.+||++.+++.
T Consensus 226 -----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 -----LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -----ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0012234567899999999999999999999975
No 173
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.5e-36 Score=304.69 Aligned_cols=250 Identities=30% Similarity=0.486 Sum_probs=204.3
Q ss_pred hcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
.++|++.+.||.|+||.||+|... |+.||+|.+..... ..+++..|+.+++.++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888999999999999999874 78899999975533 4577889999999999999999999999899999999999
Q ss_pred CCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++++|.+++..... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 99999999976542 5899999999999999999999 9999999999999999999999999999997653211
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
.....+..|+|||.+..+.++.++||||||+++||+++ |..||...... .....+..... ..
T Consensus 157 --~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~--------~~----- 219 (256)
T cd05039 157 --DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEKGYR--------ME----- 219 (256)
T ss_pred --ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhcCCC--------CC-----
Confidence 12334667999999988889999999999999999997 99998653221 11111110000 00
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+..+++++.+++.+||+.+|++||++.|++++|+++
T Consensus 220 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 220 -----APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -----CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0112356688999999999999999999999999753
No 174
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-36 Score=305.76 Aligned_cols=252 Identities=27% Similarity=0.448 Sum_probs=201.5
Q ss_pred cCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
++|.+.+.||+|++|.||+|..+.+..+|+|.+.... ...+.+.+|+++++.++|||++++++++.. +..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence 5688899999999999999998777789999876432 234678889999999999999999998754 56789999999
Q ss_pred CCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 472 HGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 472 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
+++|.++++... ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+....... ...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~-~~~ 159 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE-YTA 159 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCc-ccc
Confidence 999999997643 34788999999999999999999 9999999999999999999999999999997653322 112
Q ss_pred eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
.....++..|+|||...+..++.++||||+|+++|||++ |..||.+....+ .......... +.
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~--------~~------ 223 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERGYR--------MP------ 223 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------CC------
Confidence 223346678999999988889999999999999999999 888987533221 1111110000 00
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
.+...+..+.+++.+||++||++||+++++++.|++
T Consensus 224 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 ----CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ----CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 001234568899999999999999999999999975
No 175
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3e-36 Score=307.43 Aligned_cols=260 Identities=24% Similarity=0.440 Sum_probs=203.1
Q ss_pred CCCCCccccCCCceeEEEEEe-----CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecC--CeEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-----GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFKA 464 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 464 (678)
-|++.+.||+|+||.||++.. .++..||+|.+.... ......+.+|+++++.++|||++++.+++.+. ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999973 357889999986543 23446788999999999999999999988764 5688
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+||||+++++|.+++.+....+++..+..++.|++.|++||| +++++||||||+||+++.++.++|+|||+++....
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 999999999999999776556899999999999999999999 99999999999999999999999999999986643
Q ss_pred CCCc-ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCC----------ccchhhhhhcccC
Q 005760 545 EDQS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNG----------EMTLKHWVNDWLP 613 (678)
Q Consensus 545 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~----------~~~~~~~~~~~~~ 613 (678)
.... .......++..|+|||.+.+..++.++|||||||++|||+++..|+...... .......+..
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 238 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV--- 238 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH---
Confidence 3221 1222345677899999998888999999999999999999987765331110 0000000000
Q ss_pred CcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
..+... ...+..++.++.+++.+||+.+|++||++.|+++.|+++
T Consensus 239 -----~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 -----LEEGKR-------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred -----HHcCcc-------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000 000123456799999999999999999999999999876
No 176
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.6e-37 Score=312.55 Aligned_cols=257 Identities=26% Similarity=0.430 Sum_probs=203.2
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF 462 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 462 (678)
..++|+..+.||+|+||.||+|..+ ++..||+|++..... .....+.+|+.+++.++||||+++++++.+++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3567899999999999999999753 567899999865432 334668889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCC
Q 005760 463 KALVLEYMPHGSLEKYLHSSN---------------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPS 521 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~---------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~ 521 (678)
.++|+||+++++|.+++.... ..+++..++.++.|++.||+||| ..+++||||+|+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHh
Confidence 999999999999999997432 13677888999999999999999 999999999999
Q ss_pred CeeecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCC
Q 005760 522 NVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNG 600 (678)
Q Consensus 522 Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~ 600 (678)
||+++.++.++++|||++.................+..|+|||.+.+..++.++|||||||++|||++ |..||.+....
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999875533222222223345678999999988899999999999999999998 87887543221
Q ss_pred ccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
+........ .... .+..++.++.+++.+||+.||++|||+.|+++.|++
T Consensus 240 -----~~~~~~~~~--------~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 -----EVIYYVRDG--------NVLS-------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -----HHHHHHhcC--------CCCC-------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111110000 0000 011234568899999999999999999999999873
No 177
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-36 Score=311.46 Aligned_cols=254 Identities=27% Similarity=0.343 Sum_probs=206.4
Q ss_pred HHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 387 LCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 387 ~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
.....++|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|||++++++++...+..++
T Consensus 14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 14 VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred cCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 344567899999999999999999985 5799999999976555555778889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||+++++|.+++.+. .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 94 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 94 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred eecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 99999999999999754 3788899999999999999999 999999999999999999999999999998765332
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
. .......+++.|+|||...+..++.++|+||+||++|++++|+.||............+.. . .+...
T Consensus 169 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-----~-----~~~~~ 236 (297)
T cd06656 169 Q--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-----G-----TPELQ 236 (297)
T ss_pred c--cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-----C-----CCCCC
Confidence 2 1123346888999999998888999999999999999999999999653321111100000 0 00000
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+...+..+.+++.+||+.+|++||++.++++
T Consensus 237 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 237 --------NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred --------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01123455789999999999999999999987
No 178
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.1e-36 Score=309.90 Aligned_cols=265 Identities=20% Similarity=0.282 Sum_probs=202.2
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|++.+.||+|+||.||+|... ++..+|+|.+..... .....+.+|+++++.++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46889999999999999999854 688899999865422 3345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.++++... .+++..+..++.|+++|++||| + .+++|+||+|+||+++.++.+|++|||++......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 153 (308)
T cd06615 81 MDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 153 (308)
T ss_pred cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence 99999999998764 4788899999999999999999 6 58999999999999999999999999998654322
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccc--ccccCccCC
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK--EIVDPNLLS 626 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 626 (678)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ....+.......... ....+....
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 -MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred -ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCCC
Confidence 123456889999999998888999999999999999999999998643321 111111110000000 000000000
Q ss_pred c---cch--------------hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 627 R---EDI--------------NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 627 ~---~~~--------------~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
. ... .......++.++.+++.+||+.+|++||++.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000 000001245678999999999999999999999876
No 179
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.3e-36 Score=309.22 Aligned_cols=262 Identities=24% Similarity=0.420 Sum_probs=204.2
Q ss_pred hcCCCCCccccCCCceeEEEEEeCC-----------------CcEEEEEEeecccC-chhhhHHHHHHHHHhCCCcccee
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGD-----------------GMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIK 452 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~ 452 (678)
.++|++.+.||+|+||.||+|...+ +..||+|.+..... ...+.+.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4678999999999999999987532 34689999865432 34567889999999999999999
Q ss_pred eeeeeecCCeEEEEEEecCCCCHHHHhhhCC----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCC
Q 005760 453 VISSCSNEEFKALVLEYMPHGSLEKYLHSSN----------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSN 522 (678)
Q Consensus 453 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~N 522 (678)
+++++...+..++|+||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 9999999899999999999999999997654 25789999999999999999999 9999999999999
Q ss_pred eeecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc--CCCCCCcccCC
Q 005760 523 VLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT--RKKPTDEIFNG 600 (678)
Q Consensus 523 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~--g~~p~~~~~~~ 600 (678)
|+++.++.++++|||++................++..|+|||.+.++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999876543332233344556788999999988889999999999999999998 66777542211
Q ss_pred ccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
. .+ ................+ .+..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 241 ~-~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 Q-VI-ENAGHFFRDDGRQIYLP-----------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred H-HH-HHHHhccccccccccCC-----------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1 11 11111100000000000 01124466899999999999999999999999886
No 180
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.4e-37 Score=315.73 Aligned_cols=240 Identities=24% Similarity=0.329 Sum_probs=190.5
Q ss_pred ccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHh-CCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKS-IRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|... +++.||+|+++... ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999864 68899999997542 2233455667777775 4899999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.+++.... .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||++...... .....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--DAKTC 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC--CCcee
Confidence 99999997654 4788899999999999999999 999999999999999999999999999998643211 11223
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+... .+. .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~---------~~~-~------- 215 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMD---------NPC-Y------- 215 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---------CCC-C-------
Confidence 456899999999999888999999999999999999999999753221 111111100 000 0
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHH-HHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAK-EIV 664 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-ell 664 (678)
+...+.++.+++.+||+.||++||++. ++.
T Consensus 216 --~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 216 --PRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred --CccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 011344578999999999999999997 554
No 181
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.6e-37 Score=318.56 Aligned_cols=247 Identities=21% Similarity=0.299 Sum_probs=193.2
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|.. .+++.||+|+++... ....+.+..|..+++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999985 478999999997532 23345677899999888 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GDTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccC--CCccc
Confidence 99999887654 4899999999999999999999 999999999999999999999999999998642211 11223
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc---cchhhhhhcccCCcccccccCccCCccc
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE---MTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
...||+.|+|||++.+..++.++||||+||++|||++|+.||+.....+ .....+..... ......
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---- 223 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI-------LEKQIR---- 223 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH-------HcCCCC----
Confidence 4568999999999999899999999999999999999999996422111 11111111000 000000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCC------HHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRIN------AKEIVT 665 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps------~~ell~ 665 (678)
.+..++.++.+++.+||+.||.+|++ +.|+++
T Consensus 224 ----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 224 ----IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ----CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 00123455889999999999999997 566653
No 182
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.4e-36 Score=309.51 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=199.3
Q ss_pred CCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
|++.+.||+|+||.||+|... ++..+++|.+........+.+..|+++++.++|||++++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999864 6788999998655445567788899999999999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
++|.+++.+....+++..+..++.|+++||+||| +.+++||||+|+||+++.++.+|++|||++...... .....
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~--~~~~~ 161 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQRRD 161 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccc--ccccc
Confidence 9999988765556899999999999999999999 999999999999999999999999999998754322 12223
Q ss_pred cccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 553 QTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
...++..|+|||++. +..++.++||||+||++|||++|+.||......+. ......... .....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~----~~~~~------ 230 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKSEP----PTLAQ------ 230 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-HHHHhhcCC----CCCCC------
Confidence 456889999999874 34577899999999999999999999875332111 111111000 00000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+..++.++.+++.+||+.||.+||++.++++
T Consensus 231 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 231 -------PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1123456889999999999999999999875
No 183
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.4e-37 Score=317.20 Aligned_cols=241 Identities=22% Similarity=0.288 Sum_probs=193.2
Q ss_pred ccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|..+ +++.||+|++.... ......+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999854 68899999997542 23345667888888877 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
++|.+++.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VTTS 154 (318)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--Cccc
Confidence 99999987664 4899999999999999999999 9999999999999999999999999999986432111 1122
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...+++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.. . ....+
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--~~~~~i~~---~---~~~~~---------- 216 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--ELFQSILE---D---EVRYP---------- 216 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--HHHHHHHc---C---CCCCC----------
Confidence 346899999999999999999999999999999999999999653211 11111100 0 00000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCH-----HHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINA-----KEIVT 665 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~ell~ 665 (678)
..++.++.+++.+||+.||++||++ .++++
T Consensus 217 ---~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 217 ---RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ---CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1234568899999999999999999 77764
No 184
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.2e-36 Score=304.69 Aligned_cols=252 Identities=25% Similarity=0.376 Sum_probs=191.4
Q ss_pred ccccCCCceeEEEEEeC---CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 398 NLIGRGSFGSVFKARLG---DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+.||+|+||.||+|... ++..+|+|.++.... .....+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 46899999999999753 346799998865432 23356888999999999999999999999989999999999999
Q ss_pred CHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 474 SLEKYLHSSN----YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 474 ~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+|.++++... ...++..+..++.|++.|++||| +.+++|+||||+||+++.++++|++|||.+..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997532 23567778889999999999999 9999999999999999999999999999987544333222
Q ss_pred eeecccCCccccCccccCCC-------CCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 550 IQTQTLATIGYMAPEYGKEG-------RVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~-------~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
......++..|+|||++.+. .++.++||||||+++|||++ |..||......+... ..+. .......+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~-~~~~----~~~~~~~~ 232 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLT-YTVR----EQQLKLPK 232 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHH-HHhh----cccCCCCC
Confidence 23344577889999987542 35789999999999999996 999996543322111 1000 00011111
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
+.... ..+..+.+++..|| .+|++|||++||++.|+
T Consensus 233 ~~~~~----------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 233 PRLKL----------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CccCC----------CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11110 12344778999999 68999999999998875
No 185
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.9e-37 Score=323.79 Aligned_cols=255 Identities=22% Similarity=0.282 Sum_probs=199.0
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
...++|++.+.||+|+||.||+|... +++.+|+|++.... ......+.+|+.+++.++||||+++++++.+++..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999864 68899999986421 223455778999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+||||+++|+|.+++.... ++...+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 120 lv~Ey~~gg~L~~~l~~~~--~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNYD--VPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 9999999999999997653 788889999999999999999 99999999999999999999999999999986543
Q ss_pred CCCcceeecccCCccccCccccCCC----CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEG----RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (678)
.. ........||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .......... ...
T Consensus 195 ~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-~~~~i~~~~~-----~~~ 267 (370)
T cd05621 195 TG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-TYSKIMDHKN-----SLN 267 (370)
T ss_pred CC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCc-----ccC
Confidence 22 1122355799999999988653 37889999999999999999999997532211 1111111000 000
Q ss_pred cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 005760 621 DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQ--RINAKEIVTK 666 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~ell~~ 666 (678)
.......+..+.+++..|++.+|.+ |+++.|+++.
T Consensus 268 -----------~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 -----------FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -----------CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0001123455778999999865544 8899998864
No 186
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-36 Score=327.55 Aligned_cols=263 Identities=25% Similarity=0.337 Sum_probs=193.0
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecC--------
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNE-------- 460 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------- 460 (678)
...+|++.+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 356799999999999999999985 478999999885322 2345799999999999999998876321
Q ss_pred CeEEEEEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC-cEEEEee
Q 005760 461 EFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM-VAHLSDF 536 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~-~~kl~Df 536 (678)
..+++||||+++ ++.+++.. ....+++..+..++.||+.||+||| +++|+||||||+||+++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 246799999975 77777643 3346889999999999999999999 99999999999999999654 7999999
Q ss_pred ccccccCCCCCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCc
Q 005760 537 GIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS 615 (678)
Q Consensus 537 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (678)
|+++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|.+||.+....+ .+...+.......
T Consensus 216 Gla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~ 291 (440)
T PTZ00036 216 GSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPT 291 (440)
T ss_pred ccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCC
Confidence 9998654322 12345689999999987654 68999999999999999999999997633211 1111111000000
Q ss_pred ----------ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 616 ----------TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 616 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+.-+.. .........+...+.++.+|+.+||++||.+|||+.|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDV-KPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHhchhhhcccCCcc-CchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000000100 0111111122235677999999999999999999999984
No 187
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=8.4e-37 Score=310.92 Aligned_cols=253 Identities=25% Similarity=0.366 Sum_probs=204.6
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
.++|++.+.||.|+||.||+|... ++..+|+|++........+.+..|+++++.++||||+++++++.++...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 467899999999999999999864 6899999999766555567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++......+++..+..++.|++.|+.||| +.+|+|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~--~~ 158 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST--LQ 158 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccc--cc
Confidence 9999999999876667899999999999999999999 999999999999999999999999999998654322 11
Q ss_pred eeecccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 550 IQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
......+++.|+|||.+. ...++.++||||+|+++|||++|+.||....... ....+.... . +..
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~----~-----~~~ 228 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VLLKILKSE----P-----PTL 228 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHHHhcCC----C-----CCc
Confidence 223446888999999874 3346779999999999999999999986532211 111111000 0 000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
..+..++.++.+++.+||+.+|++||++.++++.
T Consensus 229 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 --------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0112345568899999999999999999999864
No 188
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2e-36 Score=310.00 Aligned_cols=252 Identities=25% Similarity=0.334 Sum_probs=202.4
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
.+.|++.+.||.|+||.||+|... ++..||+|.+........+.+..|+++++.++|||++++++++..++..++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 467899999999999999999864 6899999999766555667788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|..++.+....+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++...... ..
T Consensus 91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~ 165 (292)
T cd06644 91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--LQ 165 (292)
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc--cc
Confidence 9999999988766566899999999999999999999 999999999999999999999999999998654221 11
Q ss_pred eeecccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 550 IQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
......++..|+|||++. ...++.++|||||||++|||++|..||...... .....+... . .+..
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~----~-----~~~~ 235 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKS----E-----PPTL 235 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-HHHHHHhcC----C-----CccC
Confidence 223445788999999874 344678999999999999999999998653221 111111100 0 0000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+..++.++.+++.+||+.+|++||++.|+++
T Consensus 236 ~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 S--------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred C--------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 01123456889999999999999999999976
No 189
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.4e-37 Score=318.08 Aligned_cols=241 Identities=21% Similarity=0.269 Sum_probs=192.6
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 467 (678)
+|++.+.||+|+||.||+|... +++.||+|++.... ......+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999754 67899999987542 22334566677887776 5899999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~- 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG- 155 (323)
T ss_pred cCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-
Confidence 9999999999987654 4888999999999999999999 9999999999999999999999999999987532211
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.... ..-|
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~i~~~~------~~~p----- 221 (323)
T cd05616 156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIMEHN------VAYP----- 221 (323)
T ss_pred -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC------CCCC-----
Confidence 1223456899999999999999999999999999999999999999753221 1111111000 0000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 660 (678)
...+.++.+++.+|++.||++|+++
T Consensus 222 --------~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 --------KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred --------CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1234568899999999999999984
No 190
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.5e-36 Score=309.62 Aligned_cols=270 Identities=24% Similarity=0.424 Sum_probs=207.2
Q ss_pred cCCCCCccccCCCceeEEEEEeC-----CCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeec--CCeE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-----DGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSN--EEFK 463 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 463 (678)
..|++.+.||+|+||.||+|... ++..+|+|++...... ..+.+..|+++++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777899999999999999743 4788999999755442 46788999999999999999999999877 5678
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++||||+++++|.+++......+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++++|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999999999877666899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCc-ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhc-ccCCccccccc
Q 005760 544 REDQS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVND-WLPISTKEIVD 621 (678)
Q Consensus 544 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 621 (678)
..... .......++..|+|||...+..++.++||||||+++|||++|+.|+................ .......+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 32221 11222345567999999988889999999999999999999999976532221110000000 00000000000
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
... ....+..++.++.+++.+||+.+|++||++.|++++|+++
T Consensus 241 ~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 241 EGE------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCC------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 000 0011123456799999999999999999999999999876
No 191
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.8e-36 Score=313.36 Aligned_cols=240 Identities=22% Similarity=0.305 Sum_probs=190.6
Q ss_pred ccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHh-CCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKS-IRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|..+ +|+.||+|+++... ....+....|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999864 78999999997542 2234556677777775 4899999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.++|+|||+++..... .....
T Consensus 81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNRAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCcee
Confidence 99999987654 4888999999999999999999 999999999999999999999999999998643211 12233
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+... .+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~~---------~~~~-------- 215 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRVD---------TPHY-------- 215 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---------CCCC--------
Confidence 456899999999999999999999999999999999999999653221 111111100 0000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHH-HHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAK-EIV 664 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-ell 664 (678)
+..++.++.+++.+||+.||++||++. +++
T Consensus 216 --~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 216 --PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred --CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 011345578999999999999999985 554
No 192
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-36 Score=323.49 Aligned_cols=266 Identities=19% Similarity=0.199 Sum_probs=198.8
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..+|.+.+.||+|+||.||+|... .++.||+|... ...+.+|+++++.++||||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999854 68899999642 23467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+. ++|.+++......+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++.........
T Consensus 242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 95 6999988766556899999999999999999999 9999999999999999999999999999997654322222
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc------cchhhhhhccc--CCccccccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE------MTLKHWVNDWL--PISTKEIVD 621 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~ 621 (678)
......||..|+|||++.+..++.++|||||||++|||++|..|+....... ..+...+.... .........
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 2234569999999999999999999999999999999999887653321110 01111111000 000000000
Q ss_pred Ccc------------CCc-cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 622 PNL------------LSR-EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 622 ~~~------------~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
..+ ... .............++.+|+.+||+.||.+|||+.|+++.
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 000 000000001233468899999999999999999999863
No 193
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.6e-36 Score=304.71 Aligned_cols=248 Identities=25% Similarity=0.418 Sum_probs=199.2
Q ss_pred ccccCCCceeEEEEEeCC--C--cEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLGD--G--MEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+.+..|++++++++||||+++++.+.+ ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999997532 3 3699999876554 556788999999999999999999999888 889999999999
Q ss_pred CCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc-ce
Q 005760 473 GSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS-TI 550 (678)
Q Consensus 473 ~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~ 550 (678)
++|.+++.... ..+++..++.++.|++.||+||| +++++|+||+|+||+++.++.+||+|||++......... ..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999997765 46899999999999999999999 999999999999999999999999999999876543221 12
Q ss_pred eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
.....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ ....... ......
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~----~~~~~~--------- 221 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDK----EGERLE--------- 221 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHh----cCCcCC---------
Confidence 223456788999999988899999999999999999999 999986432211 1111110 000000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
.+..++..+.+++.+||+.+|++||++.|+++.|.
T Consensus 222 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 ----RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 01123456889999999999999999999999885
No 194
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.2e-36 Score=322.40 Aligned_cols=266 Identities=24% Similarity=0.318 Sum_probs=197.5
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCC-----eEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE-----FKA 464 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 464 (678)
+|+..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999985 479999999985432 223456788999999999999999999998766 789
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+|+||+. ++|.+++.... .+++..+..++.||+.||+||| +.+++||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9999996 58888886544 4889999999999999999999 99999999999999999999999999999976532
Q ss_pred CCCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc-----
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE----- 618 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 618 (678)
.. ........++..|+|||.+.+. .++.++||||+||++|||++|+.||.+..... ....+.........+
T Consensus 156 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 156 DE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred Cc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCCCCHHHHHHh
Confidence 22 2222345678999999988764 47899999999999999999999997533211 111110000000000
Q ss_pred ------cccCccCCccchh--hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 619 ------IVDPNLLSREDIN--FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 619 ------~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
............. .......++++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000000000 00001235668899999999999999999999863
No 195
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.4e-36 Score=309.67 Aligned_cols=255 Identities=28% Similarity=0.357 Sum_probs=206.7
Q ss_pred HHHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 386 ELCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 386 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
+......+|+..+.||.|++|.||+|.. .+++.||+|.+........+.+.+|+.+++.++|||++++++++...+..+
T Consensus 13 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 13 SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELF 92 (296)
T ss_pred hcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE
Confidence 3344456799999999999999999974 578999999997655555677889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+|+||+++++|.+++... .+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 93 lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 93 VVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 999999999999998754 3789999999999999999999 99999999999999999999999999999876543
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||........ ........ .....
T Consensus 168 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~~~~~~~----~~~~~---- 236 (296)
T cd06655 168 EQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNG----TPELQ---- 236 (296)
T ss_pred ccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcC----CcccC----
Confidence 221 12334688899999999888899999999999999999999999865332211 11000000 00000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+..++..+.+++.+||+.||++||++.++++
T Consensus 237 ---------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 237 ---------NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ---------CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 01124456889999999999999999999985
No 196
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.7e-36 Score=304.28 Aligned_cols=251 Identities=27% Similarity=0.440 Sum_probs=202.6
Q ss_pred cCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
.+|++.+.||+|+||.||+|.+.++..+|+|.+..... ....+.+|+++++.++|||++++++++......++|+||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46788899999999999999887788999998864322 23578899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++......+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+....... ....
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~ 158 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-YTSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCc-cccc
Confidence 99999999876656889999999999999999999 9999999999999999999999999999987653321 1112
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
....++..|+|||...++.++.++||||+|+++|||++ |..||...... ........ . .....+.
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~----~-~~~~~~~------- 224 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETINA----G-FRLYKPR------- 224 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHhC----C-CCCCCCC-------
Confidence 23345678999999988889999999999999999998 88998642221 11111100 0 0001111
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
..+.++.+++.+||+.+|++||++.|++++|
T Consensus 225 ------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 ------LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ------CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1235588999999999999999999999987
No 197
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.6e-36 Score=304.41 Aligned_cols=249 Identities=22% Similarity=0.323 Sum_probs=201.0
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
+|++.+.||+|+||.||++... ++..+|+|.++... ....+.+..|+.+++.++||||+++++++.+.+..++|+||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999854 78999999986432 334567788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++++|.+++... ...++...+..++.|++.|+.||| +++++|+||+|+||++++++.++++|||.+....... .
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--~ 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--A 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccc--c
Confidence 999999988653 335788999999999999999999 9999999999999999999999999999987654322 1
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
......+++.|+|||.+.+..++.++|+||+|+++|+|++|+.||........ ......... . +
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~----~----~------- 219 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-ILKVCQGSY----K----P------- 219 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-HHHHhcCCC----C----C-------
Confidence 22345688899999999888899999999999999999999999975321111 000000000 0 0
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.+..++.++.+++.+||+.||++||++.|++.+
T Consensus 220 ----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 ----LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ----CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 001234458899999999999999999999864
No 198
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.6e-36 Score=303.84 Aligned_cols=239 Identities=22% Similarity=0.383 Sum_probs=189.2
Q ss_pred ccccCCCceeEEEEEeCC-------------CcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 398 NLIGRGSFGSVFKARLGD-------------GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
+.||+|+||.||+|.... ...|++|++..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999997432 2358999886554455567888999999999999999999999988999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCc-------EEEEeec
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMV-------AHLSDFG 537 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~-------~kl~Dfg 537 (678)
+||||+++++|..++......+++..+..++.||++|++||| +++|+||||||+||+++.++. ++++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999998876666899999999999999999999 999999999999999987664 8999999
Q ss_pred cccccCCCCCcceeecccCCccccCccccC-CCCCCccchHHHHHHHHHHHH-cCCCCCCcccCCccchhhhhhcccCCc
Q 005760 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGK-EGRVSANGDVYSFGIMLMETF-TRKKPTDEIFNGEMTLKHWVNDWLPIS 615 (678)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslGv~l~ell-~g~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (678)
++..... .....++..|+|||.+. +..++.++|||||||++|||+ +|..|+......+ .......
T Consensus 158 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~----- 224 (262)
T cd05077 158 IPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERFYEG----- 224 (262)
T ss_pred CCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHHHhc-----
Confidence 9865432 12345778899999886 456889999999999999998 4778775422111 0110000
Q ss_pred ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
...... ....++.+++.+||+.||.+||++.|+++.+
T Consensus 225 ~~~~~~---------------~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 QCMLVT---------------PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CccCCC---------------CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000000 1234588999999999999999999999875
No 199
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.5e-36 Score=318.43 Aligned_cols=263 Identities=24% Similarity=0.298 Sum_probs=196.3
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCC-----
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE----- 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 461 (678)
..++|++.+.||+|+||.||+|.. .+|..||+|++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999975 478999999986432 233466778999999999999999999885443
Q ss_pred -eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 462 -FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 462 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
..++||||+++ ++.+.+.. .++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 57899999965 67666643 3788889999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhc----------
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVND---------- 610 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~---------- 610 (678)
.... ........+|+.|+|||.+.+..++.++||||+||++|+|++|+.||.+....+ ........
T Consensus 172 ~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 172 TACT---NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred cccc---CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCcHHHHH
Confidence 5432 122234568999999999999999999999999999999999999997532211 00000000
Q ss_pred --------cc-------CCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 611 --------WL-------PISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 611 --------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
+. .....+.. +...... ........+.++.+++.+||++||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELF-PDWIFPS--ESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhc-ccccccc--ccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 00000000 0000000 000001234568899999999999999999999873
No 200
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.9e-36 Score=303.75 Aligned_cols=252 Identities=26% Similarity=0.436 Sum_probs=193.9
Q ss_pred ccccCCCceeEEEEEeC----CCcEEEEEEeecc-cCchhhhHHHHHHHHHhCCCccceeeeeeee-cCCeEEEEEEecC
Q 005760 398 NLIGRGSFGSVFKARLG----DGMEVAMKVFNLQ-YGRVFKSFDVECEMMKSIRHRNIIKVISSCS-NEEFKALVLEYMP 471 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~ 471 (678)
+.||+|+||.||+|... ++..||+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999742 3467999987533 2234567888999999999999999999765 4556789999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc--c
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS--T 549 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~ 549 (678)
+++|.+++.+.....++..+..++.|+++|++||| +.+++||||||+||++++++.+|++|||+++........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 99999999876555778888899999999999999 899999999999999999999999999998754322111 1
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCC-CCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......++..|+|||.+.+..++.++|||||||++|||++|+ +||...... .....+.... .+.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--~~~~~~~~~~--------~~~----- 222 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--DITVYLLQGR--------RLL----- 222 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhcCC--------CCC-----
Confidence 112334567899999998888999999999999999999955 455432111 1111111000 000
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
.+..++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 223 -----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 223 -----QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 001234558899999999999999999999999998753
No 201
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.7e-36 Score=310.42 Aligned_cols=266 Identities=21% Similarity=0.290 Sum_probs=200.9
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|.+.+.||+|+||.||+|..+ +++.||+|.+.... ......+.+|+++++.++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57889999999999999999754 68899999986543 22335677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++ ++|.+++......+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++....... .
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 159 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--C
Confidence 97 5999998876666889999999999999999999 9999999999999999999999999999987543221 1
Q ss_pred eeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCC----cccccccCcc
Q 005760 550 IQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI----STKEIVDPNL 624 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 624 (678)
......+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+ ....+...... ....+.+...
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCChhhchhhhcccc
Confidence 12234568899999987654 47889999999999999999999997533211 11111111100 0000000000
Q ss_pred C-----Cccchhh--HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 625 L-----SREDINF--VAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 625 ~-----~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .....+. ......+.++.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 0000000 011234667889999999999999999999987
No 202
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.1e-37 Score=322.10 Aligned_cols=258 Identities=23% Similarity=0.286 Sum_probs=200.1
Q ss_pred HHHHhhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCC
Q 005760 386 ELCRATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE 461 (678)
Q Consensus 386 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 461 (678)
++....++|++.+.||+|+||.||+|..+ +++.+|+|++.... ......+.+|+.+++.++||||+++++++.+.+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445689999999999999999999864 78899999986421 223455778999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
..++||||+++|+|.+++.... ++...+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 9999999999999999997653 788888899999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCcceeecccCCccccCccccCCC----CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccc
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGKEG----RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 617 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 617 (678)
..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ......... ...
T Consensus 192 ~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~---~~~ 266 (371)
T cd05622 192 MNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMNHK---NSL 266 (371)
T ss_pred cCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-HHHHHHcCC---Ccc
Confidence 64322 1122345799999999988653 37889999999999999999999997532211 111111000 000
Q ss_pred ccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 005760 618 EIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQ--RINAKEIVTK 666 (678)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~ell~~ 666 (678)
. +......+..+.+++.+|++.++.+ |+++.|+++.
T Consensus 267 ~-------------~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 267 T-------------FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred c-------------CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 0 0011124556789999999844433 7799998874
No 203
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2e-36 Score=311.54 Aligned_cols=259 Identities=25% Similarity=0.434 Sum_probs=203.7
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCc----EEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGM----EVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+..... .....+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 356788899999999999999753 444 478888764432 2234678899999999999999999998764 467
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+++||+++|+|.+++......+++..+..++.|++.|++||| +++|+|+||||+||+++.++.+||+|||+++....
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccC
Confidence 999999999999999876666889999999999999999999 99999999999999999999999999999986643
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 623 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (678)
...........++..|+|||.+.+..++.++|||||||++|||++ |+.||.+.... ....++.... ....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~-----~~~~-- 232 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDLLEKGE-----RLPQ-- 232 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCC-----CCCC--
Confidence 322222233446778999999988889999999999999999998 88998653211 1122211100 0000
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 624 LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
+..++.++.+++.+||..+|++||++.|+++.|+++...
T Consensus 233 -----------~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 233 -----------PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred -----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 012344588999999999999999999999999998644
No 204
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-36 Score=323.12 Aligned_cols=263 Identities=23% Similarity=0.233 Sum_probs=200.6
Q ss_pred hcCCCCCccccCCCceeEEEEEeC---CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG---DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
..+|.+.+.||+|+||.||++... .+..||+|.+... ....+|+++++.++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999642 4678999987532 34567999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|++. ++|.+++... ..+++..+..++.|++.||.||| +++|+||||||+||+++.++.++|+|||++........
T Consensus 166 e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 166 PKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9995 5898888544 45899999999999999999999 99999999999999999999999999999976654433
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc--cchhhhhhccc--CCcccc-----
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE--MTLKHWVNDWL--PISTKE----- 618 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~--~~~~~~~~~~~--~~~~~~----- 618 (678)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ..+...+.... +.....
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 333345679999999999999999999999999999999999999986533221 01111111000 000000
Q ss_pred ----------cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 619 ----------IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 619 ----------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
...+... ..........+.++.+++.+||+.||++||++.|++..
T Consensus 321 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYT---IPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHhhcccccCCcc---ccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 00001112235568899999999999999999999864
No 205
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.3e-36 Score=302.46 Aligned_cols=249 Identities=28% Similarity=0.424 Sum_probs=197.2
Q ss_pred ccccCCCceeEEEEEeC----CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|.+. .+..+|+|.+..... ...+.+..|+++++.+.|||++++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 47999999999999642 236899999875433 245678899999999999999999998764 467899999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce-e
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI-Q 551 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-~ 551 (678)
++|.+++.... .+++..+..++.|++.|++||| ..+++|+||+|+||+++.++.+|++|||++........... .
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999998765 5889999999999999999999 99999999999999999999999999999976643322111 1
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
....++..|+|||...+..++.++||||||+++|||++ |..||..... .....++....+ ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~-----~~---------- 218 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGER-----LP---------- 218 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCc-----CC----------
Confidence 12223467999999988899999999999999999998 9999865332 122222211100 00
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
.+..++..+.+++.+||+.+|++||++.++++.|+++.
T Consensus 219 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 219 ---RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 01123456889999999999999999999999998763
No 206
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.4e-37 Score=318.66 Aligned_cols=238 Identities=26% Similarity=0.345 Sum_probs=191.6
Q ss_pred ccccCCCceeEEEEEe----CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 398 NLIGRGSFGSVFKARL----GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|+++++.++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999864 3689999999975422 233456789999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++.+.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++....... ...
T Consensus 82 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKA 155 (318)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--Cce
Confidence 999999997654 4889999999999999999999 9999999999999999999999999999987653221 122
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchh
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIN 631 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (678)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||......+ ........ .. .
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-~~~~i~~~----~~---------~----- 216 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-TMTMILKA----KL---------G----- 216 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-HHHHHHcC----CC---------C-----
Confidence 34568999999999988889999999999999999999999996532211 11110000 00 0
Q ss_pred hHHHHHHHHHHHHHHhhccccCcCCCCCHHH
Q 005760 632 FVAKEQCVSFVFNVAMECTVESPEQRINAKE 662 (678)
Q Consensus 632 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e 662 (678)
.+...+.++.+++.+||+.||++||++.+
T Consensus 217 --~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 --MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00123455789999999999999999544
No 207
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7.7e-36 Score=301.77 Aligned_cols=254 Identities=27% Similarity=0.421 Sum_probs=200.1
Q ss_pred HhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
.+++.+.....||+|+||.||+|.. .++..||+|.+........+.+.+|+++++.++|+||+++++++..++..++|+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3455666667999999999999984 468889999987655555678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-CCcEEEEeeccccccCC
Q 005760 468 EYMPHGSLEKYLHSSNYIL--DIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-~~~~kl~Dfg~~~~~~~ 544 (678)
||+++++|.++++.....+ +...+..++.|++.|++||| +++|+||||+|+||+++. ++.++|+|||.+.....
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 9999999999998654434 78888899999999999999 999999999999999976 67999999999876532
Q ss_pred CCCcceeecccCCccccCccccCCCC--CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGR--VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.. .......++..|+|||++.+.. ++.++||||+|+++|+|++|+.||.......... +...... ..+
T Consensus 162 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~~~~~~~------~~~ 231 (268)
T cd06624 162 IN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--FKVGMFK------IHP 231 (268)
T ss_pred CC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--hhhhhhc------cCC
Confidence 21 1122345788999999886644 7889999999999999999999986532211111 1000000 000
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+..+.+++.+++.+||+.+|++||++.|++.
T Consensus 232 ~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 232 E----------IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred C----------CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0 01124456889999999999999999999875
No 208
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.3e-36 Score=303.41 Aligned_cols=249 Identities=29% Similarity=0.445 Sum_probs=199.3
Q ss_pred hcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeee-ecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSC-SNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~ 469 (678)
.++|.+.+.||+|+||.||+|.. .|..||+|.++.. ...+.+.+|+.+++.++|+|++++++++ .+.+..++|+||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 35788899999999999999976 4788999998643 2346788999999999999999999975 455678999999
Q ss_pred cCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.++++.... .+++..+..++.|++.|++||| +++++||||||+||+++.++.+|++|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 999999999976543 4788999999999999999999 9999999999999999999999999999987543211
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.....+..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+....+ +.
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~~~~~~--------~~---- 219 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYK--------MD---- 219 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCCC--------CC----
Confidence 22334568999999988889999999999999999998 88888642111 11111110000 00
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
.+..+++.+.+++.+||+.+|++|||+.++++.|+++
T Consensus 220 ------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 220 ------APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0012456688999999999999999999999998753
No 209
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=7.9e-37 Score=322.29 Aligned_cols=252 Identities=24% Similarity=0.366 Sum_probs=196.5
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|+..+.||+|+||.||+|.. .+++.||+|++.... ......+..|+.++..++||+|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4688899999999999999975 478999999996432 234466788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.+.+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 9999999999997654 4888999999999999999999 99999999999999999999999999999875432110
Q ss_pred c---------------------------------ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCC
Q 005760 548 S---------------------------------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPT 594 (678)
Q Consensus 548 ~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~ 594 (678)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0 0011346899999999999999999999999999999999999999
Q ss_pred CcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC---HHHHHH
Q 005760 595 DEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN---AKEIVT 665 (678)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps---~~ell~ 665 (678)
........ ... +..+. .....|. ....+.++.+++.+|+. ||.+|++ +.|+++
T Consensus 237 ~~~~~~~~-~~~-i~~~~----~~~~~p~-----------~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 237 CSETPQET-YRK-VMNWK----ETLVFPP-----------EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCHHHH-HHH-HHcCC----CceecCC-----------CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 76332211 111 00000 0000000 00134457788888764 9999995 566654
No 210
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.8e-36 Score=303.50 Aligned_cols=254 Identities=25% Similarity=0.448 Sum_probs=204.1
Q ss_pred hhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|+++++.++|+|++++.+++.+ ...+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 356889999999999999999998778889999886432 234678889999999999999999999887 778999999
Q ss_pred cCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.+++... ....++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.+|++|||.+....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~ 157 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-Y 157 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCC-c
Confidence 9999999999764 345788899999999999999999 8999999999999999999999999999987654322 1
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.......++..|+|||.+..+.++.++|+|||||++|++++ |+.||...... ....+....... +
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~-------~----- 223 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRM-------P----- 223 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCCC-------C-----
Confidence 12223345678999999988889999999999999999999 88898653221 111111110000 0
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
.....+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 224 ------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 ------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001234568899999999999999999999999875
No 211
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-35 Score=302.21 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=202.4
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45777889999999999999864 68999999987543 23456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++... .++...+..++.|++.|++|+| +.+++|+||+|+||+++.++.++++|||++....... .
T Consensus 84 ~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~ 156 (277)
T cd06640 84 LGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--I 156 (277)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc--c
Confidence 9999999998754 4788899999999999999999 9999999999999999999999999999997654322 1
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
......++..|+|||.+.+..++.++|+|||||++|||++|+.||......... ..... ...+
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~~~~~--------~~~~------- 219 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL--FLIPK--------NNPP------- 219 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh--hhhhc--------CCCC-------
Confidence 123345788899999998888999999999999999999999998653322110 00000 0000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.....++..+.+++.+||+.+|++||++.|+++.
T Consensus 220 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 ---TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0112356678899999999999999999999876
No 212
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.3e-36 Score=303.87 Aligned_cols=248 Identities=29% Similarity=0.478 Sum_probs=194.0
Q ss_pred ccccCCCceeEEEEEeC-CCc--EEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGM--EVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|..+ ++. .+++|.+.... ....+.+..|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999864 443 46888876432 23446788899999999 799999999999999999999999999
Q ss_pred CCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeec
Q 005760 473 GSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537 (678)
Q Consensus 473 ~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg 537 (678)
++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 99999997543 24678899999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcc
Q 005760 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPIST 616 (678)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (678)
++.... ..........+..|+|||++....++.++|||||||++|||++ |..||......+ ....+....
T Consensus 158 l~~~~~---~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~---- 228 (270)
T cd05047 158 LSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKLPQGY---- 228 (270)
T ss_pred Cccccc---hhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--HHHHHhCCC----
Confidence 985321 1111122234567999999988889999999999999999997 999986532211 111110000
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
... .+..++.++.+++.+||+.+|.+|||+.|+++.|+++.
T Consensus 229 ----~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 ----RLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ----CCC----------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 00123456889999999999999999999999998874
No 213
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.2e-36 Score=316.04 Aligned_cols=237 Identities=27% Similarity=0.320 Sum_probs=187.2
Q ss_pred ccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHH-HHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECE-MMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|... +|+.||+|++.... ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999864 79999999996532 122234444444 56789999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++...... .....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (323)
T cd05575 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SKTTS 154 (323)
T ss_pred CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CCccc
Confidence 99999997654 4888899999999999999999 999999999999999999999999999998653221 12223
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ........... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~~~~------~-~------- 215 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA-----EMYDNILNKPL------R-L------- 215 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH-----HHHHHHHcCCC------C-C-------
Confidence 456899999999999989999999999999999999999999653211 11111000000 0 0
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAK 661 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 661 (678)
+...+.++.+++.+|++.||.+||++.
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 --KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred --CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 011245588999999999999999985
No 214
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9.4e-37 Score=317.12 Aligned_cols=241 Identities=25% Similarity=0.286 Sum_probs=188.2
Q ss_pred ccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHH-HHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVE-CEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e-~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|... +++.||+|++.... ......+..| ..+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999854 67889999986532 1222333444 3456788999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
++|.+++.... .+....+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGTTS 154 (325)
T ss_pred CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC--CCCcc
Confidence 99999998655 3777888889999999999999 999999999999999999999999999998754221 11233
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...|++.|+|||++.+..++.++||||+||++|||++|+.||......+. ...+. ... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~---~~~--------~~~------ 215 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM--YDNIL---NKP--------LQL------ 215 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH--HHHHH---hCC--------cCC------
Confidence 45689999999999998999999999999999999999999975322111 11100 000 000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....+..+.+++.+|++.||.+||++.+.+.
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 216 --KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred --CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 0123455789999999999999999875443
No 215
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.2e-36 Score=310.85 Aligned_cols=195 Identities=23% Similarity=0.344 Sum_probs=159.9
Q ss_pred CccccCCCceeEEEEEeC---CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeec--CCeEEEEEEecC
Q 005760 397 NNLIGRGSFGSVFKARLG---DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN--EEFKALVLEYMP 471 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~ 471 (678)
.++||+|+||.||+|..+ +++.||+|.+... .....+.+|+++++.++||||+++++++.. ....++|+||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999853 5688999998643 223557789999999999999999998854 456789999985
Q ss_pred CCCHHHHhhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee----cCCCcEEEEeeccc
Q 005760 472 HGSLEKYLHSS--------NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL----DDNMVAHLSDFGIA 539 (678)
Q Consensus 472 ~~~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill----~~~~~~kl~Dfg~~ 539 (678)
+ +|.+++... ...++...+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4 888887532 124788899999999999999999 9999999999999999 46689999999999
Q ss_pred cccCCCCC-cceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcc
Q 005760 540 KLLTREDQ-STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEI 597 (678)
Q Consensus 540 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~ 597 (678)
........ ........+|+.|+|||++.+. .++.++||||+||++|||++|++||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 76643221 1122345789999999988764 5889999999999999999999999653
No 216
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.7e-36 Score=317.90 Aligned_cols=266 Identities=23% Similarity=0.257 Sum_probs=196.8
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC------
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE------ 460 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 460 (678)
..++|++.+.||+|+||.||+|.. ..++.||+|++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457899999999999999999975 478999999986532 22345677899999999999999999987543
Q ss_pred CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
...++||||+++ ++.+.+.. .++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence 357899999965 67777653 3788889999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh-----------
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN----------- 609 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~----------- 609 (678)
.... ........+|..|+|||++.+..++.++||||+||++|||++|+.||.+....+. ....+.
T Consensus 168 ~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 168 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMK 243 (355)
T ss_pred cCCC---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHH
Confidence 5432 2222345689999999999988899999999999999999999999965321110 000000
Q ss_pred -------cccCC--cccccccCccCCccc--hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 610 -------DWLPI--STKEIVDPNLLSRED--INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 610 -------~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.+... .......+....... .+.........++.+++.+|++.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000 000000000000000 0000111234568899999999999999999999874
No 217
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=7.3e-36 Score=302.61 Aligned_cols=239 Identities=23% Similarity=0.354 Sum_probs=188.2
Q ss_pred cccCCCceeEEEEEeC-------------------------CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceee
Q 005760 399 LIGRGSFGSVFKARLG-------------------------DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKV 453 (678)
Q Consensus 399 ~ig~G~~g~V~~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 453 (678)
+||+|+||.||+|... ....||+|++..........+.+|+++++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999998631 123589998865544445678889999999999999999
Q ss_pred eeeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC----
Q 005760 454 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM---- 529 (678)
Q Consensus 454 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~---- 529 (678)
++++.+.+..++||||+++++|..++......+++..+..++.|++.||+||| +++|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccC
Confidence 99999999999999999999999999776666899999999999999999999 99999999999999997544
Q ss_pred ---cEEEEeeccccccCCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHH-cCCCCCCcccCCccch
Q 005760 530 ---VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETF-TRKKPTDEIFNGEMTL 604 (678)
Q Consensus 530 ---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell-~g~~p~~~~~~~~~~~ 604 (678)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||......+.
T Consensus 159 ~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-- 230 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-- 230 (274)
T ss_pred ccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH--
Confidence 4899999987543211 22346788999998865 55889999999999999995 68888865332211
Q ss_pred hhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 605 KHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
..+..... ..+ ....+++.+++.+||+.+|++||++.++++.|+
T Consensus 231 ~~~~~~~~-------~~~-------------~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 ERFYEKKH-------RLP-------------EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHhcc-------CCC-------------CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11111000 000 011235789999999999999999999998873
No 218
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.7e-36 Score=314.05 Aligned_cols=260 Identities=28% Similarity=0.427 Sum_probs=204.2
Q ss_pred hcCCCCCccccCCCceeEEEEEeC--------CCcEEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecC
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG--------DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNE 460 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 460 (678)
..+|++.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+++++.+ +||||+++++++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 346889999999999999999632 12368999886432 23456788999999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL 525 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill 525 (678)
+..++++||+++|+|.+++.... ..+++..+..++.|++.|++||| +++++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEE
Confidence 99999999999999999987532 24678889999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccch
Q 005760 526 DDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTL 604 (678)
Q Consensus 526 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~ 604 (678)
+.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~ 245 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--EL 245 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HH
Confidence 9999999999999976543222222223344567999999998899999999999999999998 88888653211 11
Q ss_pred hhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 605 KHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
...+..... +. .+..++.++.+++.+||+.+|++||++.|+++.|+++...
T Consensus 246 ~~~~~~~~~--------~~----------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 246 FKLLKEGHR--------MD----------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred HHHHHcCCC--------CC----------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 111110000 00 0012345688999999999999999999999999988743
No 219
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-36 Score=306.71 Aligned_cols=254 Identities=24% Similarity=0.340 Sum_probs=205.4
Q ss_pred hhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecc--cCchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 466 (678)
....|++.++||+||.+.||++...+.+.+|+|++... +.+....|..|+..|.+|+ |.+||++++|-..++.+|+|
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 34579999999999999999999888888888876433 3456788999999999996 99999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||= ..||..++++.....+...+..++.|++.++.++| .+||||.||||.|+++=. |.+||+|||.|..+....
T Consensus 439 mE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred eecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 9986 45999999988776665688999999999999999 999999999999999854 689999999999887777
Q ss_pred CcceeecccCCccccCccccCCC-----------CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCc
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEG-----------RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS 615 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (678)
+.......+||+.||+||.+... +++.++||||+||+||+|+.|+.||......-. .
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a------------K 581 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA------------K 581 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH------------H
Confidence 77778888999999999976432 267889999999999999999999976332211 1
Q ss_pred ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+..+.+|...-... +.. ...++.++|+.||..||.+||++.|+++
T Consensus 582 l~aI~~P~~~Iefp-~~~----~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 582 LHAITDPNHEIEFP-DIP----ENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHhhcCCCcccccc-CCC----CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 22233332211100 000 1122889999999999999999999985
No 220
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.5e-36 Score=306.02 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=198.1
Q ss_pred HhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeeecC------
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCSNE------ 460 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------ 460 (678)
.+++.|+..+.||+|+||.||+|.. .+++.||+|++.... .....+..|+.+++.+ +|||++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 3567788899999999999999975 478899999986543 3346778899999998 699999999988642
Q ss_pred CeEEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccc
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIA 539 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~ 539 (678)
...++||||+++++|.+++.... ..+++..+..++.|++.|++||| +++|+|+|++|+||++++++.++|+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 46889999999999999988643 35789999999999999999999 899999999999999999999999999998
Q ss_pred cccCCCCCcceeecccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCC
Q 005760 540 KLLTREDQSTIQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI 614 (678)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 614 (678)
....... .......++..|+|||++. ...++.++||||+||++|||++|+.||........... ... .
T Consensus 159 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~--~~~---~ 231 (272)
T cd06637 159 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL--IPR---N 231 (272)
T ss_pred eeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH--Hhc---C
Confidence 7653221 1223456889999999875 33578899999999999999999999865322111100 000 0
Q ss_pred cccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 615 STKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..+... ...++.++.+++.+||+.+|.+|||+.|+++
T Consensus 232 -----~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 232 -----PAPRLK---------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -----CCCCCC---------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 000000 0123456889999999999999999999975
No 221
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.3e-35 Score=299.64 Aligned_cols=251 Identities=23% Similarity=0.388 Sum_probs=200.8
Q ss_pred CCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccC------chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYG------RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
+|+..+.||+|+||.||+|...+++.+|+|.+..... .....+.+|+++++.++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4788899999999999999888899999999864321 1235678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
+||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999999997654 4788899999999999999999 8999999999999999999999999999987543211
Q ss_pred C----cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 547 Q----STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 547 ~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
. ........++..|+|||...+..++.++||||+|+++|||++|+.||........ ........ ...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-~~~~~~~~-------~~~~ 228 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-MFYIGAHR-------GLMP 228 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-HHHhhhcc-------CCCC
Confidence 1 1112334688899999999988899999999999999999999999965322111 10000000 0001
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.. +..++.++.+++.+||+.+|++||++.|++.
T Consensus 229 ~~----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 229 RL----------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CC----------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0123456889999999999999999999875
No 222
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.6e-36 Score=311.84 Aligned_cols=255 Identities=23% Similarity=0.281 Sum_probs=196.8
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||++.. .+++.||+|++... .....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4788999999999999999985 46899999998642 1223456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.+....+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 999999999999875556889999999999999999999 99999999999999999999999999999876543221
Q ss_pred cceeecccCCccccCccccCC-----CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 548 STIQTQTLATIGYMAPEYGKE-----GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.......||+.|+|||++.. +.++.++||||+||++|||++|+.||......+. ...... ......+ +
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~-~~~i~~---~~~~~~~--~ 230 (331)
T cd05597 158 -VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMN---HKEHFQF--P 230 (331)
T ss_pred -ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH-HHHHHc---CCCcccC--C
Confidence 12223468999999998863 4578899999999999999999999865322111 111000 0000000 0
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcC--CCCCHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPE--QRINAKEIVTK 666 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~--~Rps~~ell~~ 666 (678)
. ....++.++.+++.+|+..++. .|+++.++++.
T Consensus 231 ~----------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 231 P----------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred C----------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0 0011455678899988765443 37899988764
No 223
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=7.8e-36 Score=304.26 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=198.5
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+..|+.+++.++|++++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 367788999999999999975 4789999999864321 223456789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++++|.+++.... ..++...+..++.|++.|+.||| +.+|+||||||+||+++.++.++++|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999999886433 35888999999999999999999 9999999999999999999999999999987543221
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......|+..|+|||.+.+..++.++||||+||++|+|++|+.||........ .... ..... .. ..
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~-~~~~~----~~-~~----- 222 (285)
T cd05630 157 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEV-ERLVK----EV-QE----- 222 (285)
T ss_pred --cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHH-Hhhhh----hh-hh-----
Confidence 11234689999999999988999999999999999999999999975322110 0000 00000 00 00
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRIN-----AKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~ell~ 665 (678)
..+..+++++.+++.+||+.||++||| +.|+++
T Consensus 223 -----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 -----EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -----hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 001124556889999999999999999 888887
No 224
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7e-36 Score=301.88 Aligned_cols=249 Identities=25% Similarity=0.415 Sum_probs=199.4
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCc---------hhhhHHHHHHHHHhCCCccceeeeeeeecCCe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGR---------VFKSFDVECEMMKSIRHRNIIKVISSCSNEEF 462 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 462 (678)
+|.+.+.||+|++|.||+|.. .+++.+|+|.+...... ..+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477889999999999999975 46899999988643221 23567889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
.++|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999999997764 4788889999999999999999 999999999999999999999999999998766
Q ss_pred CCCCC----cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc
Q 005760 543 TREDQ----STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 618 (678)
Q Consensus 543 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (678)
..... ........++..|+|||.+.+..++.++|+||+||++|+|++|+.||....... .... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~-~~~-------- 226 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIFK-IGE-------- 226 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HHHH-Hhc--------
Confidence 42211 111123457889999999988889999999999999999999999987532211 1100 000
Q ss_pred cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 619 IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+.. +..++.++.+++.+||+.||.+||++.|+++
T Consensus 227 ~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 NASPEI----------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cCCCcC----------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000110 0123456889999999999999999999976
No 225
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-35 Score=302.35 Aligned_cols=249 Identities=25% Similarity=0.342 Sum_probs=197.5
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999974 578999999986542 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|..+. .+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 9999997653 3678888999999999999999 999999999999999999999999999998755322
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccch--hhhhhcccCCcccccccCccCCc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTL--KHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......++..|+|||.+.+..++.++||||+|+++|+|++|+.||.......... .......... ..+.. .
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~- 221 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-----DPPVL-P- 221 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc-----CCCCC-C-
Confidence 1234568899999999998889999999999999999999999987533221110 0111000000 00000 0
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
....++++.+++.+||+.+|++||++.|+++.
T Consensus 222 -------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 222 -------VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 01134458899999999999999999999764
No 226
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.7e-36 Score=304.25 Aligned_cols=249 Identities=28% Similarity=0.493 Sum_probs=196.5
Q ss_pred ccccCCCceeEEEEEeCC-------CcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 398 NLIGRGSFGSVFKARLGD-------GMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+.||+|+||.||+|...+ ++.+|+|.+.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 469999999999997532 2579999875432 23456788999999999999999999999998999999999
Q ss_pred cCCCCHHHHhhhC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC-----cEEEEeecc
Q 005760 470 MPHGSLEKYLHSS------NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM-----VAHLSDFGI 538 (678)
Q Consensus 470 ~~~~~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~-----~~kl~Dfg~ 538 (678)
+++++|.+++... ...+++..+..++.|++.|++||| +.+++|+||+|+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999753 234778899999999999999999 89999999999999999877 899999999
Q ss_pred ccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCccc
Q 005760 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTK 617 (678)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 617 (678)
+................++..|+|||.+.++.++.++|||||||++|||++ |+.||...... .....+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~------ 229 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHVTAG------ 229 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHHhcC------
Confidence 876543322222233445678999999999999999999999999999998 99998643221 111111100
Q ss_pred ccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 618 EIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
. ....+..++..+.+++.+||+.+|++||++.++++.|++
T Consensus 230 -----~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 -----G-------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred -----C-------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 000112245668899999999999999999999998863
No 227
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.2e-36 Score=304.97 Aligned_cols=265 Identities=25% Similarity=0.315 Sum_probs=193.8
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhC---CCccceeeeeeeec-----CC
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSI---RHRNIIKVISSCSN-----EE 461 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~ 461 (678)
+|++.+.||+|+||.||+|..+ +++.||+|.++.... .....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5788899999999999999754 789999999865422 1223456677777665 69999999998754 34
Q ss_pred eEEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
..++|+||+++ +|.+++.... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 67899999975 8988887543 34889999999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc---CCccc
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL---PISTK 617 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 617 (678)
...... ......++..|+|||++.+..++.++||||+||++|||++|++||......+ .......... .....
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChhhCc
Confidence 654221 1233567899999999988899999999999999999999999986532211 1111111000 00000
Q ss_pred cccc--CccCCccchhhH--HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 618 EIVD--PNLLSREDINFV--AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 618 ~~~~--~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.... ............ ....++.++.+++.+|+++||++|||+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 000000000000 01234567889999999999999999999875
No 228
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.3e-36 Score=302.97 Aligned_cols=248 Identities=27% Similarity=0.362 Sum_probs=202.7
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|+..+.||.|++|.||+|... +++.||+|.+.... ......+.+|+++++.++|||++++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999854 78999999987543 33446788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++... .+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++++|||+++...... .
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--S 153 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--c
Confidence 9999999999865 5899999999999999999999 9999999999999999999999999999998764321 2
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||........ ....... ..+....
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~---------~~~~~~~--- 220 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-LFLIPKN---------NPPSLEG--- 220 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-HHHhhhc---------CCCCCcc---
Confidence 22345678899999999988899999999999999999999999865332111 0000000 0000000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..++.++.+++.+||..+|++||+++++++
T Consensus 221 ------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 221 ------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 014456889999999999999999999975
No 229
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.2e-36 Score=316.40 Aligned_cols=240 Identities=27% Similarity=0.328 Sum_probs=188.4
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHH-HHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECE-MMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|.. .+|+.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999975 478999999996532 223344455544 56779999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++...... .....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~ 154 (325)
T cd05604 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDTTT 154 (325)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCCcc
Confidence 99999887654 4889999999999999999999 999999999999999999999999999998643221 12223
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...|++.|+|||++.+..++.++||||+||++|||++|+.||......+. ...... ... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-~~~~~~----~~~--~~~----------- 216 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM-YDNILH----KPL--VLR----------- 216 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH-HHHHHc----CCc--cCC-----------
Confidence 45689999999999999999999999999999999999999965322111 111100 000 000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell 664 (678)
...+..+.+++.+|++.+|.+||++.+.+
T Consensus 217 ---~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 217 ---PGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred ---CCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 01234577999999999999999886433
No 230
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.2e-36 Score=312.53 Aligned_cols=241 Identities=21% Similarity=0.273 Sum_probs=191.9
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 467 (678)
+|+..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+..|..+++.+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467789999999999999985 478999999987532 223455677888888875 577888999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.... .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 9999999999997654 4889999999999999999999 9999999999999999999999999999987532211
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+. ... ...|
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~---~~~---~~~p----- 221 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQSIM---EHN---VSYP----- 221 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHH---hCC---CCCC-----
Confidence 1223456899999999999888999999999999999999999999753221 1111110 000 0000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINA 660 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 660 (678)
..++.++.+++.+||+.+|.+|+++
T Consensus 222 --------~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 --------KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --------ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1234557899999999999999975
No 231
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.7e-36 Score=310.27 Aligned_cols=243 Identities=23% Similarity=0.299 Sum_probs=190.7
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|.. .+++.||+|++.... ....+.+..|+.++..+ +||+|+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999985 468899999997542 23345677899998888 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
++|.+++...+ .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR-KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--GDTTS 154 (327)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC--CCcee
Confidence 99999887654 4899999999999999999999 999999999999999999999999999998753221 11223
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc-cchhhhhhcccCCcccccccCccCCccchh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE-MTLKHWVNDWLPISTKEIVDPNLLSREDIN 631 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (678)
...||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....+........ ....|
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p--------- 223 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIP--------- 223 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCC---------
Confidence 4568999999999999999999999999999999999999996432211 11111111000000 00000
Q ss_pred hHHHHHHHHHHHHHHhhccccCcCCCCCHH
Q 005760 632 FVAKEQCVSFVFNVAMECTVESPEQRINAK 661 (678)
Q Consensus 632 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 661 (678)
...+..+.+++.+||+.||++|+++.
T Consensus 224 ----~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 224 ----RFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ----CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 11334578999999999999999853
No 232
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.2e-35 Score=300.55 Aligned_cols=252 Identities=25% Similarity=0.379 Sum_probs=188.5
Q ss_pred ccccCCCceeEEEEEeC---CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 398 NLIGRGSFGSVFKARLG---DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+.||+|+||.||+|... ....+|+|.+..... .....+.+|++.++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 36899999999999743 345688887754322 23456788999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCC----CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 474 SLEKYLHSSNY----ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 474 ~L~~~l~~~~~----~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+|.+++..... ..++.....++.|++.|++||| +++|+||||||+||+++.++.+|++|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999976532 2456778899999999999999 9999999999999999999999999999986543322222
Q ss_pred eeecccCCccccCccccCC-------CCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 550 IQTQTLATIGYMAPEYGKE-------GRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
......++..|+|||+... ..++.++||||+||++|||++ |..||......+ .....+.. ....+..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~----~~~~~~~ 232 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVRE----QDIKLPK 232 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhc----cCccCCC
Confidence 2233446678999998643 356789999999999999999 777876532211 11111111 0001111
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
+.. ...++..+.+++..|| .||++||+++||++.|.
T Consensus 233 ~~~----------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 233 PQL----------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred Ccc----------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111 1123455778889998 59999999999999874
No 233
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.5e-36 Score=305.21 Aligned_cols=266 Identities=25% Similarity=0.316 Sum_probs=197.8
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|++.+.||+|++|.||+|+.. +++.||+|.+.... ......+.+|+.+++.++|||++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999854 78999999986542 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 470 MPHGSLEKYLHSSN--YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 470 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
++ ++|.+++.... ..+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 154 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-- 154 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC--
Confidence 97 58988886533 45889999999999999999999 999999999999999999999999999998754322
Q ss_pred cceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccC---Cccc---ccc
Q 005760 548 STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP---ISTK---EIV 620 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~---~~~ 620 (678)
........+++.|+|||.+.+. .++.++||||+||++|||++|+.||.......... ........ .... ...
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLF-RIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHHHHhCCCChhhhhcchhhH
Confidence 1122334578899999987654 47889999999999999999999987532211110 00000000 0000 000
Q ss_pred c--CccCCccchh-hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 621 D--PNLLSREDIN-FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 621 ~--~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+ +......... ......+++++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 0000000000 0001125677889999999999999999999875
No 234
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.9e-36 Score=304.32 Aligned_cols=250 Identities=21% Similarity=0.287 Sum_probs=197.6
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.|+..+.||+|+||+||+|.. .+++.||+|.+.... ......+.+|+++++.++|+|++++.+++..++..++|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 366778999999999999975 478999999986432 1223456789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++++|.+++.... ..+++..+..++.|++.|+.||| +++|+||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999998886543 35899999999999999999999 9999999999999999999999999999986543221
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......++..|+|||++.+..++.++|+||+||++|||++|..||........ ............ . .
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~~~~~~~--~----~---- 223 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDRRVLETE--E----V---- 223 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhhccc--c----c----
Confidence 12344689999999999888899999999999999999999999975322111 111111000000 0 0
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRIN-----AKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~ell~ 665 (678)
.....+.++.+++..||+.||++||+ +.|+++
T Consensus 224 ------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 224 ------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 01123455789999999999999999 666665
No 235
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.4e-35 Score=298.24 Aligned_cols=238 Identities=23% Similarity=0.420 Sum_probs=189.4
Q ss_pred ccccCCCceeEEEEEeCC-C----------cEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 398 NLIGRGSFGSVFKARLGD-G----------MEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
+.||+|+||.||+|...+ + ..+++|.+...... ...+.+|+.+++.++||||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 468999999999998653 3 25788877544332 5788899999999999999999999887 778999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC-------cEEEEeeccc
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM-------VAHLSDFGIA 539 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~-------~~kl~Dfg~~ 539 (678)
|||+++++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+|++|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999999999876656899999999999999999999 99999999999999999887 7999999998
Q ss_pred cccCCCCCcceeecccCCccccCccccCCC--CCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcc
Q 005760 540 KLLTREDQSTIQTQTLATIGYMAPEYGKEG--RVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPIST 616 (678)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (678)
..... .....++..|+|||++.+. .++.++||||+|+++|||++ |..||...... ....+...
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~~------ 221 (259)
T cd05037 156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQD------ 221 (259)
T ss_pred ccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHhc------
Confidence 76532 2234466789999998876 78899999999999999999 56676553221 11111110
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
....... ...++.+++.+||..+|++||++.|+++.|+
T Consensus 222 -----~~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 -----QHRLPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -----CCCCCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000000 0145889999999999999999999998873
No 236
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.1e-35 Score=300.11 Aligned_cols=253 Identities=25% Similarity=0.328 Sum_probs=204.7
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|+..+.||.|++|.||+|..+ +++.||+|.+.... ......+.+|+++++.++||||+++++.+...+..++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 36788899999999999999865 78999999986553 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.+++......++...+..++.|++.|++||| + .+++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 9999999999876556889999999999999999999 8 9999999999999999999999999999865532211
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
....++..|+|||.+.+..++.++||||+|+++|+|++|+.||..................... .+..
T Consensus 157 ---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~---- 224 (265)
T cd06605 157 ---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-----PPRL---- 224 (265)
T ss_pred ---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-----CCCC----
Confidence 1156888999999998889999999999999999999999998764322222222221111000 0000
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....++.++.+++.+||..+|++||++.|++.
T Consensus 225 -----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 225 -----PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -----ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 01114566889999999999999999999975
No 237
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9e-36 Score=313.38 Aligned_cols=263 Identities=21% Similarity=0.250 Sum_probs=195.7
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
...+|++.+.||+|+||.||+|... +++.||+|+... .....|+.+++.++||||+++++++...+..++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4467999999999999999999854 678899997532 233569999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|+. ++|.+++......+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 210 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--- 210 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccC---
Confidence 995 5899998776667899999999999999999999 999999999999999999999999999998743211
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCC-CcccCC-cc-------chhhhhhcc--cCCccc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPT-DEIFNG-EM-------TLKHWVNDW--LPISTK 617 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~-~~~~~~-~~-------~~~~~~~~~--~~~~~~ 617 (678)
.......||..|+|||++.+..++.++|||||||++|||+++..|+ ...... .. .+...+... .+....
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 290 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP 290 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence 1123456899999999999999999999999999999999965554 321111 00 011111100 000000
Q ss_pred ---------ccccCccCC---ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 618 ---------EIVDPNLLS---REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 618 ---------~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+..... ............+.++.+++.+||+.||++||||.|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 000000000 000011111234556778999999999999999999985
No 238
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.2e-35 Score=298.31 Aligned_cols=249 Identities=23% Similarity=0.325 Sum_probs=203.2
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|+..+.||.|+||.||.++. .+++.+++|.+.... ......+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478899999999999999974 578999999986542 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.+++... ...+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999765 345889999999999999999999 89999999999999999999999999999976543221
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......+++.|+|||...+..++.++||||+|+++|||++|..||......+ ....... ..... .
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~----~~~~~---------~ 221 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN-LVVKIVQ----GNYTP---------V 221 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHc----CCCCC---------C
Confidence 2334568899999999988888999999999999999999999986522211 1111110 00000 0
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
...++.++.+++.+||+.+|++||++.|+++.
T Consensus 222 ------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 222 ------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ------ccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 02345568899999999999999999999875
No 239
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-35 Score=298.69 Aligned_cols=250 Identities=31% Similarity=0.566 Sum_probs=200.6
Q ss_pred CCCCccccCCCceeEEEEEeCC-----CcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 394 FSENNLIGRGSFGSVFKARLGD-----GMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
+++.+.||.|+||.||++...+ +..||+|++...... ..+.+..|+++++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999998643 488999999655432 5678889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
||+++++|.+++...... +++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999999865544 899999999999999999999 9999999999999999999999999999997665432
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
... .....++..|+|||...+..++.++||||+|+++|+|++ |..||...... ...+.+.... ....
T Consensus 158 ~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~~~~~-----~~~~---- 225 (258)
T smart00219 158 YYK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVLEYLKKGY-----RLPK---- 225 (258)
T ss_pred ccc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCC-----CCCC----
Confidence 221 112336789999999988889999999999999999998 77887642111 1111111000 0000
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
+..++.++.+++.+|++.||++|||+.|+++.|
T Consensus 226 ---------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 ---------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 012456688999999999999999999998864
No 240
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.3e-35 Score=308.95 Aligned_cols=266 Identities=20% Similarity=0.276 Sum_probs=194.9
Q ss_pred CCccccCC--CceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 396 ENNLIGRG--SFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 396 ~~~~ig~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
+.+.||+| +|++||++.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 7899999975 589999999987542 233456778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999653 234889999999999999999999 9999999999999999999999999998754432211110
Q ss_pred -----eeecccCCccccCccccCC--CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcc------
Q 005760 550 -----IQTQTLATIGYMAPEYGKE--GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST------ 616 (678)
Q Consensus 550 -----~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~------ 616 (678)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||........... ......+...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE-KLNGTVPCLLDTTTIP 237 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHH-HhcCCccccccccchh
Confidence 1122346678999999876 3588999999999999999999999975322211111 0000000000
Q ss_pred -ccc--------ccCcc--------CC---ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 -KEI--------VDPNL--------LS---REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 -~~~--------~~~~~--------~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+. .+... .. ...........+++++.+++.+||++||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000 00000 00 000000011234667999999999999999999999986
No 241
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.2e-36 Score=303.19 Aligned_cols=254 Identities=24% Similarity=0.428 Sum_probs=202.6
Q ss_pred cCCCCCccccCCCceeEEEEEeC------CCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG------DGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 464 (678)
++|++.+.||+|+||.||+|+.+ +...|++|.+...... ..+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999853 3467999988654433 4577899999999999999999999999989999
Q ss_pred EEEEecCCCCHHHHhhhCC--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEee
Q 005760 465 LVLEYMPHGSLEKYLHSSN--------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDF 536 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Df 536 (678)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997654 14789999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCc
Q 005760 537 GIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPIS 615 (678)
Q Consensus 537 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (678)
|++....... ........++..|+|||.+.+..++.++||||||+++|++++ |..||....... ....... ..
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~~~~~~~---~~ 235 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--VLNRLQA---GK 235 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--HHHHHHc---CC
Confidence 9986543221 122233456778999999888888999999999999999999 778885432211 1111110 00
Q ss_pred ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
. .+.. +..++..+.+++.+||+.+|++||++.|+++.|+
T Consensus 236 ~-~~~~-------------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 236 L-ELPV-------------PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred c-CCCC-------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0 0000 0123456889999999999999999999999885
No 242
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.9e-36 Score=314.90 Aligned_cols=264 Identities=22% Similarity=0.235 Sum_probs=196.3
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC------
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE------ 460 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 460 (678)
..++|.+.+.||+|+||.||+|.. ..++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999975 478899999986432 23346678899999999999999999987543
Q ss_pred CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
...|+||||+++ +|.+.+.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 357999999965 78777753 3788889999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccc-
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI- 619 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 619 (678)
..... .......++..|+|||++.+..++.++||||+||++|||++|+.||......+ .....+.... ....+.
T Consensus 175 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~-~~~~~~~ 249 (364)
T cd07875 175 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLG-TPCPEFM 249 (364)
T ss_pred ccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC-CCCHHHH
Confidence 54322 22234568999999999999899999999999999999999999997533211 1111110000 000000
Q ss_pred ----------c--cCccC--------Cc--cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 ----------V--DPNLL--------SR--EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ----------~--~~~~~--------~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+... .. .............++.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 00000 00 00000000112456889999999999999999999986
No 243
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6.2e-36 Score=305.18 Aligned_cols=267 Identities=25% Similarity=0.299 Sum_probs=198.6
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|+..+.||+|+||.||+|... +|+.||+|.+..... .....+.+|+++++.++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999854 789999999865422 2335677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++ ++|.+++......+++..+..++.||++|+.||| +++++||||+|+||+++.++.+||+|||++....... .
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV--R 154 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--C
Confidence 96 5888888765556899999999999999999999 9999999999999999999999999999987653221 1
Q ss_pred eeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCc------ccccccC
Q 005760 550 IQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS------TKEIVDP 622 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 622 (678)
......++..|+|||.+.+.. ++.++||||+||++|||++|+.|+.........+........... .....+.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 123345788999999876654 689999999999999999999886432222111111100000000 0000000
Q ss_pred ccCCccch--h-hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDI--N-FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~--~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
........ . .......++++.+++.+||+.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000 0 0001234667889999999999999999999975
No 244
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.9e-35 Score=302.77 Aligned_cols=269 Identities=22% Similarity=0.276 Sum_probs=199.4
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++++|.+.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.+++.++|+||+++++++.+.+..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 457899999999999999999975 4789999999865432 22345678999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+. +++.+++......+.+..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||+++.......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 9995 6888777655555788888999999999999999 99999999999999999999999999999875432211
Q ss_pred cceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc-C------------
Q 005760 548 STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL-P------------ 613 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~-~------------ 613 (678)
......+++.|+|||.+.+. .++.++||||+||++|||++|+.||+........+...+.... +
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 159 --TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred --CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 12334578899999988754 4788999999999999999999999754332111111110000 0
Q ss_pred CcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....... +................+.++.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 237 NYKPEWF-LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccchhc-cccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000 00000000000001112456889999999999999999999874
No 245
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.3e-35 Score=300.16 Aligned_cols=267 Identities=25% Similarity=0.333 Sum_probs=201.4
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++|+..+.||+|++|.||+|..+ +|+.||+|++.... ....+.+.+|+++++.++|||++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999865 68999999986432 2234567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|++++.|..+..... .+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence 999988887775543 4899999999999999999999 89999999999999999999999999999986643321
Q ss_pred ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccch--hhhhhcccCC--------c-c
Q 005760 549 TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTL--KHWVNDWLPI--------S-T 616 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~--~~~~~~~~~~--------~-~ 616 (678)
......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.+....+... ........+. . .
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 1223457789999998766 457889999999999999999999997543321111 1110000000 0 0
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.....+.......... .....+..+.+++.+||+.+|++||++.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 235 KGLSIPEPETREPLES-KFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccCCCcccccCHHH-HhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0001111111000000 01134667899999999999999999999875
No 246
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-37 Score=314.05 Aligned_cols=250 Identities=25% Similarity=0.360 Sum_probs=207.0
Q ss_pred CCCCCccccCCCceeEEEEEeCC-CcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 393 GFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
-|.++..||.|+||.||+|..++ +-..|.|++.....+..+++.-|++++..+.||+||++++.|...+.++++.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 34556789999999999998764 45567899888888888999999999999999999999999988899999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
||.+..++-.-+..+...++..++.|++.||.||| +..|+|||+|+.|||++-+|.+++.|||.+.... ..-...
T Consensus 113 GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkR 187 (1187)
T KOG0579|consen 113 GGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKR 187 (1187)
T ss_pred CchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccch--hHHhhh
Confidence 99999988777778999999999999999999999 9999999999999999999999999999986432 233456
Q ss_pred ecccCCccccCcccc-----CCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 552 TQTLATIGYMAPEYG-----KEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~-----~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
..+.|||+|||||+. ...+|+.++||||||++|.||..+.+|-.........+.. .+. ..|.
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKi-aKS---------ePPT--- 254 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-AKS---------EPPT--- 254 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHH-hhc---------CCCc---
Confidence 778999999999964 4567999999999999999999999997654433222211 111 1111
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+..+...+..+.+++++|+.+||..||++.++++
T Consensus 255 -----LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 -----LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred -----ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1222234556889999999999999999999985
No 247
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8.4e-36 Score=310.56 Aligned_cols=255 Identities=21% Similarity=0.268 Sum_probs=197.6
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|.+.+.||+|+||.||+++.+ +++.||+|++.... ......+.+|..++..++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999854 78899999986421 223455778999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999999999875556889999999999999999999 99999999999999999999999999999976543221
Q ss_pred cceeecccCCccccCccccCC-----CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 548 STIQTQTLATIGYMAPEYGKE-----GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.......|++.|+|||++.+ +.++.++||||+||++|||++|+.||......+ ......... . ...-+
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-~~~~i~~~~--~---~~~~p 230 (331)
T cd05624 158 -VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHE--E---RFQFP 230 (331)
T ss_pred -eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH-HHHHHHcCC--C---cccCC
Confidence 12234568999999998865 467889999999999999999999996532211 111110000 0 00000
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQ--RINAKEIVTK 666 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~ell~~ 666 (678)
... ...+.++.+++.+|+..++.+ |++++++++.
T Consensus 231 ~~~----------~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 231 SHI----------TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred Ccc----------ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 000 123456889999999876554 4688887753
No 248
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.7e-36 Score=303.60 Aligned_cols=252 Identities=28% Similarity=0.450 Sum_probs=198.4
Q ss_pred CCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchh--hhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVF--KSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
|++.+.||+|+||+||++... +++.+|+|++........ .....|+.+++.++||||+++++++.+.+..++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567889999999999999854 677899999976543222 23355999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 471 PHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 471 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
++++|.+++.... .++...+..++.|+++||++|| +.+++|+||||+||+++.++.++|+|||.+.... .....
T Consensus 81 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKNK-PLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNEN 154 (260)
T ss_dssp TTEBHHHHHHHHS-SBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTSE
T ss_pred ccccccccccccc-cccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc--ccccc
Confidence 9999999998433 4899999999999999999999 8999999999999999999999999999997541 22334
Q ss_pred eecccCCccccCccccC-CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 551 QTQTLATIGYMAPEYGK-EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
.....++..|+|||... +..++.++||||+|+++|+|++|..||...... ............ . ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~~---~-~~-------- 220 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILKR---P-LP-------- 220 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHHT---H-HH--------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhcccc---c-cc--------
Confidence 45667899999999988 788999999999999999999999998764100 000000000000 0 00
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...........++.+++.+||+.||++||++.|+++
T Consensus 221 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 221 SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000011267999999999999999999999975
No 249
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.3e-35 Score=309.51 Aligned_cols=255 Identities=21% Similarity=0.272 Sum_probs=197.7
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||++..+ +++.+|+|++... .......+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999854 6788999998642 1223345788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++|+|.+++.+....+++..+..++.|++.|+.||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG- 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCC-
Confidence 999999999999876556899999999999999999999 9999999999999999999999999999987553222
Q ss_pred cceeecccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 548 STIQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
........||+.|+|||++. ...++.++|||||||++|||++|+.||......+ ........ . ....-+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~-~~~~i~~~----~-~~~~~p 230 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNH----K-ERFQFP 230 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH-HHHHHhCC----C-ccccCC
Confidence 22223456899999999875 3457889999999999999999999997532111 11111000 0 000000
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQ--RINAKEIVTK 666 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~ell~~ 666 (678)
. ....++.++.+++.+|+..+|.. |+++.|+++.
T Consensus 231 ~----------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 231 A----------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred C----------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 00134566889999988665444 7899998765
No 250
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3e-36 Score=312.89 Aligned_cols=237 Identities=26% Similarity=0.301 Sum_probs=186.0
Q ss_pred ccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHH-HHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVEC-EMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999864 78999999986432 12233444454 467889999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
++|..++.... .++...+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (321)
T cd05603 81 GELFFHLQRER-CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EETTS 154 (321)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCccc
Confidence 99998887654 4788888899999999999999 999999999999999999999999999998753221 12233
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...|++.|+|||.+.+..++.++||||+||++|||++|+.||...... .......... ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~i~~~~-------~~~~------ 216 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-----QMYDNILHKP-------LQLP------ 216 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH-----HHHHHHhcCC-------CCCC------
Confidence 456899999999999888999999999999999999999999653211 1111100000 0000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAK 661 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 661 (678)
...+.++.+++.+|++.||.+||++.
T Consensus 217 ---~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 217 ---GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ---CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11234578999999999999999764
No 251
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=311.13 Aligned_cols=245 Identities=29% Similarity=0.418 Sum_probs=202.1
Q ss_pred CCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
-|.-.+.||.|+||.||-|+ ..+.+.||||++.-. ..+.+.++..|+..++.++|||++.+.|||..+.+.++|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 35557889999999999997 457889999998543 34567889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
||- |+-.|++.-.+.++.+..+..|..+.+.||+||| +.+.||||||+.|||+++.|.||++|||.|....+.
T Consensus 107 YCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA--- 179 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA--- 179 (948)
T ss_pred HHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCch---
Confidence 995 4888888777777889999999999999999999 999999999999999999999999999999776432
Q ss_pred ceeecccCCccccCcccc---CCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 549 TIQTQTLATIGYMAPEYG---KEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
..++|||.|||||++ ..++|+-++||||+|++..|+..+++|...+. .-..+.+... -..|.+.
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-AMSALYHIAQ---------NesPtLq 246 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQ---------NESPTLQ 246 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-HHHHHHHHHh---------cCCCCCC
Confidence 457899999999975 46789999999999999999999999965422 1122222221 1112222
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
+ ...+..+..++..|+++-|.+|||..++++.
T Consensus 247 s---------~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 S---------NEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred C---------chhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 1 2345568899999999999999999998763
No 252
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.3e-36 Score=303.04 Aligned_cols=246 Identities=26% Similarity=0.365 Sum_probs=199.2
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+++++.++||||+++++++...+..++|+||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 455678899999999999975 468899999986443 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 471 PHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 471 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
++++|.+++... .+++..+..++.|++.|+.||| +++++|+||+|+||+++.++.++++|||++....... ..
T Consensus 85 ~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06642 85 GGGSALDLLKPG--PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc--hh
Confidence 999999998754 4788999999999999999999 9999999999999999999999999999987654321 12
Q ss_pred eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
.....++..|+|||.+.+..++.++|||||||++|||++|+.|+........ ....... ..+..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~--------~~~~~------ 221 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFLIPKN--------SPPTL------ 221 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--HhhhhcC--------CCCCC------
Confidence 2234578899999999988899999999999999999999999865332211 1110000 00000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...++.++.+++.+||+.+|++||++.|+++
T Consensus 222 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 222 ----EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ----CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0123456889999999999999999999998
No 253
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.3e-35 Score=311.19 Aligned_cols=264 Identities=22% Similarity=0.292 Sum_probs=195.5
Q ss_pred HhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecC-----
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNE----- 460 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 460 (678)
...++|++.+.||+|+||.||+|.. .++..||+|++..... .....+.+|+++++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3467899999999999999999974 5788999999864322 2335577899999999999999999887532
Q ss_pred -CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccc
Q 005760 461 -EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIA 539 (678)
Q Consensus 461 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~ 539 (678)
...++++|++ +++|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccc
Confidence 3568999988 77998888644 4889999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc
Q 005760 540 KLLTREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 618 (678)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (678)
...... .....+++.|+|||++.+ ..++.++||||+||++|+|++|+.||....... .+..+... .......
T Consensus 166 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~-~~~~~~~ 238 (343)
T cd07878 166 RQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEV-VGTPSPE 238 (343)
T ss_pred eecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHH-hCCCCHH
Confidence 765322 233568999999998876 468899999999999999999999986532111 11111100 0000000
Q ss_pred ccc-----------CccCCccchhhH-HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 619 IVD-----------PNLLSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 619 ~~~-----------~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
... ..+......+.. ......+.+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 000000000000 00123455789999999999999999999985
No 254
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.2e-36 Score=302.65 Aligned_cols=240 Identities=25% Similarity=0.371 Sum_probs=189.4
Q ss_pred ccccCCCceeEEEEEeC-C-------CcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 398 NLIGRGSFGSVFKARLG-D-------GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+.||+|+||.||+|..+ . ..+||+|.+........+.+.+|+.+++.++|||++++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 46999999999999753 2 334888888655445557788999999999999999999999998899999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCc--------EEEEeeccccc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMV--------AHLSDFGIAKL 541 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~--------~kl~Dfg~~~~ 541 (678)
+++|+|.++++..+..+++..+..++.||+.|++||| +++|+||||||+||+++.++. ++++|||.+..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999999876666899999999999999999999 999999999999999987765 69999999865
Q ss_pred cCCCCCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCC-CCCCcccCCccchhhhhhcccCCccccc
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEI 619 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (678)
.... ....++..|+|||.+.+. .++.++|||||||++|||++|. .|+....... ........
T Consensus 158 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~-------- 221 (258)
T cd05078 158 VLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KLQFYEDR-------- 221 (258)
T ss_pred cCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HHHHHHcc--------
Confidence 4321 224577889999998764 4789999999999999999985 5544321111 01111000
Q ss_pred ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 620 VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
.... .....++.+++.+||+.||++|||++|+++.|+
T Consensus 222 --~~~~----------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 --HQLP----------APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred --ccCC----------CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 011245789999999999999999999999863
No 255
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-35 Score=301.11 Aligned_cols=255 Identities=23% Similarity=0.330 Sum_probs=203.6
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|++.+.||+|+||+||+|.. ++|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 5688889999999999999985 468999999986543 33457788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++...+ .+++..+..++.+++.|+.|||+ ..+++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred CCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 99999999987654 48899999999999999999993 2689999999999999999999999999986542211
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCcc------chhhhhhcccCCcccccccCc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEM------TLKHWVNDWLPISTKEIVDPN 623 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 623 (678)
.....++..|+|||.+.++.++.++|||||||++|++++|..||+.....+. ....+........ .+.
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 232 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-----PPR 232 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-----CCC
Confidence 1234688999999998888899999999999999999999999975433210 0111111110000 000
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 624 LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
. ....++.++.+++.+||++||++||++.|+++..
T Consensus 233 ~---------~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 233 L---------PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred C---------CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0 0112456789999999999999999999999864
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.2e-35 Score=303.46 Aligned_cols=259 Identities=23% Similarity=0.316 Sum_probs=200.7
Q ss_pred HHHHHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeee---
Q 005760 384 YLELCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCS--- 458 (678)
Q Consensus 384 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~--- 458 (678)
+..+..++++|++.+.||+|+||.||+|.. .+++.+|+|++.... .....+..|+.+++.+ +||||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 455566789999999999999999999975 468899999876432 2335678899999999 6999999999873
Q ss_pred --cCCeEEEEEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEE
Q 005760 459 --NEEFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHL 533 (678)
Q Consensus 459 --~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl 533 (678)
..+..++||||+++++|.+++.. ....+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.+++
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEE
Confidence 44678999999999999998753 2335788889999999999999999 999999999999999999999999
Q ss_pred EeeccccccCCCCCcceeecccCCccccCccccCC-----CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhh
Q 005760 534 SDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE-----GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWV 608 (678)
Q Consensus 534 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~ 608 (678)
+|||+++...... .......++..|+|||++.. ..++.++||||+||++|||++|+.||........ .....
T Consensus 166 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-~~~~~ 242 (286)
T cd06638 166 VDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-LFKIP 242 (286)
T ss_pred ccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-Hhhcc
Confidence 9999987654221 12233468899999998753 3478899999999999999999999865322111 10000
Q ss_pred hcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
. .......++ ..++.++.+++.+||+.||++||++.|+++.
T Consensus 243 ~----~~~~~~~~~-------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 243 R----NPPPTLHQP-------------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred c----cCCCcccCC-------------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 000001111 1133458899999999999999999999874
No 257
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4e-35 Score=296.28 Aligned_cols=256 Identities=26% Similarity=0.347 Sum_probs=204.6
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|++.+.||.|+||+||+|.. .++..+|+|++.... ....+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4788999999999999999985 478899999986432 23457788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 470 MPHGSLEKYLHSSN--YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 470 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
+++++|.++++... ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++++|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999997642 35789999999999999999999 99999999999999999999999999999876654322
Q ss_pred cc--eeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 548 ST--IQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 548 ~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
.. ......++..|+|||.+... .++.++|+|||||++|||++|+.||........ ........ +..
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~----------~~~ 226 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LMLTLQND----------PPS 226 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HHHHhcCC----------CCC
Confidence 21 22334688899999988777 789999999999999999999999975433221 11111110 000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..... ....+++++.+++.+||+.||++||++.|+++
T Consensus 227 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 227 LETGA----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cCCcc----ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000 01234566889999999999999999999985
No 258
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.9e-35 Score=295.57 Aligned_cols=248 Identities=24% Similarity=0.383 Sum_probs=198.8
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeec-CCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSN-EEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 468 (678)
+|++.+.||+|++|.||++..+ +++.||+|.+.... ....+.+.+|+++++.++|||++++++.+.. ....++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5888999999999999999854 67899999986542 2344667889999999999999999998764 446789999
Q ss_pred ecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
|+++++|.+++.... ..+++.++..++.|++.|+++|| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 999999999997643 35889999999999999999999 9999999999999999999999999999997653321
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.......+++.|+|||...+..++.++||||+|+++|+|++|+.||....... ..........+ ..
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~~~---------~~--- 222 (257)
T cd08223 157 -DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS-LVYRIIEGKLP---------PM--- 222 (257)
T ss_pred -CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcCCC---------CC---
Confidence 12234567889999999998889999999999999999999999986432111 11111111100 00
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+...++++.+++.+||+.+|++||++.|+++
T Consensus 223 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 223 -------PKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -------ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0124456889999999999999999999986
No 259
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4e-35 Score=297.24 Aligned_cols=254 Identities=25% Similarity=0.398 Sum_probs=197.9
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC----------chhhhHHHHHHHHHhCCCccceeeeeeeecCC
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG----------RVFKSFDVECEMMKSIRHRNIIKVISSCSNEE 461 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 461 (678)
+|...+.||+|+||.||+|.. .+|+.||+|.++.... ...+.+..|+++++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467789999999999999974 4789999998854211 12346778999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
..++|+||+++++|.++++... .++...+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 9999999999999999998764 5888899999999999999999 89999999999999999999999999999876
Q ss_pred cCCCCCcceeecccCCccccCccccCCCC--CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccc
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGKEGR--VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI 619 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (678)
..............++..|+|||...... ++.++|+||+|+++||+++|..||....... .... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----~~~~-~~~~~~~~~ 232 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA----AMFK-LGNKRSAPP 232 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH----HHHH-hhccccCCc
Confidence 43221111223345788999999877654 7889999999999999999999986422211 1110 000000000
Q ss_pred ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.... ....++.++.+++.+||+++|++||++.|+++
T Consensus 233 ~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 233 IPPD----------VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCcc----------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 0000 00124566889999999999999999999875
No 260
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.6e-35 Score=300.86 Aligned_cols=251 Identities=23% Similarity=0.349 Sum_probs=198.5
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|++.+.||+|+||.||+|..+ ++..||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36888999999999999999865 78999999986542 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 470 MPHGSLEKYLHSS--NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 470 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
+++++|.+++... ...+++..+..++.|++.|+.|||+ +.+++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 9999999998764 2258999999999999999999992 3599999999999999999999999999987553221
Q ss_pred cceeecccCCccccCccccCCCC------CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGR------VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
.....++..|+|||.+.+.. ++.++|+||+||++|+|++|+.||........ . .......... .
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~-~~~~~~~~~~-----~ 227 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-F-AQLSAIVDGD-----P 227 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH-H-HHHHHHhhcC-----C
Confidence 12345778899999885543 47899999999999999999999865322111 0 0000000000 0
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+. .+..++.++.+++.+||+.+|++||++.|++.
T Consensus 228 ~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 228 PT----------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred CC----------CCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 00 01125566889999999999999999999987
No 261
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2e-35 Score=299.56 Aligned_cols=254 Identities=27% Similarity=0.470 Sum_probs=197.7
Q ss_pred CCCCccccCCCceeEEEEEeC----CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCC------
Q 005760 394 FSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE------ 461 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 461 (678)
|.+.+.||+|+||.||+|... +++.||+|++.... ....+++.+|+++++.++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999742 46889999986542 234567888999999999999999999875432
Q ss_pred eEEEEEEecCCCCHHHHhhhCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEee
Q 005760 462 FKALVLEYMPHGSLEKYLHSSN-----YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDF 536 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Df 536 (678)
..++++||+.+|+|.+++.... ..++...+..++.|++.|++||| +++|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 3478999999999998875321 24788889999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCc
Q 005760 537 GIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPIS 615 (678)
Q Consensus 537 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (678)
|.++...............+++.|++||.+....++.++|||||||++|||++ |+.||...... ....++.....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~-- 233 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLIKGNR-- 233 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHHcCCc--
Confidence 99986543322222233445678999999988889999999999999999999 88887653221 11111111000
Q ss_pred ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 005760 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKI 670 (678)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~ 670 (678)
...+ ..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 234 ---~~~~-------------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 ---LKQP-------------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---CCCC-------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 12345688999999999999999999999999875
No 262
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6.8e-35 Score=294.72 Aligned_cols=252 Identities=23% Similarity=0.382 Sum_probs=186.8
Q ss_pred ccccCCCceeEEEEEeCCC---cEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 398 NLIGRGSFGSVFKARLGDG---MEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999974333 346677665433 234567889999999999999999999999999999999999999
Q ss_pred CHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 474 SLEKYLHSSN---YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 474 ~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
+|.++++... ...+...+..++.||+.||+||| +.+++||||||+||+++.++.++++|||++...........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 9999997642 23566677889999999999999 89999999999999999999999999999854322111122
Q ss_pred eecccCCccccCccccCC-------CCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 551 QTQTLATIGYMAPEYGKE-------GRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||......+ ....... .......++
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~----~~~~~~~~~ 232 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-VLNHVIK----DQQVKLFKP 232 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHh----hcccccCCC
Confidence 234567889999998743 235788999999999999997 566775422211 1111111 111112222
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
.... .....+.+++..|| .+|++||+++|+++.|.
T Consensus 233 ~~~~----------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 233 QLEL----------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccCC----------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2211 12345778999999 67999999999998874
No 263
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.3e-35 Score=296.14 Aligned_cols=248 Identities=21% Similarity=0.347 Sum_probs=200.9
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|++.+.||+|+||.||.+.. .+++.||+|.+.... ....+++.+|+.+++.++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 588899999999999999975 478999999986532 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.+++.... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 99999999987643 35788999999999999999999 89999999999999999999999999999976543221
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......+++.|+|||...+..++.++|+|||||++|+|++|+.||......+ ..........+ .
T Consensus 157 -~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~---------~----- 220 (256)
T cd08218 157 -LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN-LVLKIIRGSYP---------P----- 220 (256)
T ss_pred -hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH-HHHHHhcCCCC---------C-----
Confidence 1223457888999999988889999999999999999999999986421111 11111110000 0
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+..++.++.+++.+||+.+|++||++.|+++
T Consensus 221 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 221 -----VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -----CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 01124556889999999999999999999986
No 264
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.2e-35 Score=302.16 Aligned_cols=253 Identities=27% Similarity=0.339 Sum_probs=204.6
Q ss_pred HhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
...++|.+.+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++|||++++++++...+..++|+
T Consensus 16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 3457899999999999999999975 478899999986554445577889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++++|.+++.+.. +++..+..++.|++.|+.||| +++++|+|++|+||+++.++.++|+|||++........
T Consensus 96 e~~~~~~L~~~~~~~~--l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 96 EYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred ecCCCCcHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999999999997653 788899999999999999999 99999999999999999999999999999875543221
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......+++.|+|||....+.++.++||||||+++|++++|+.||........... ... .+..
T Consensus 171 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-~~~-----------~~~~--- 233 (293)
T cd06647 171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IAT-----------NGTP--- 233 (293)
T ss_pred --ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-hhc-----------CCCC---
Confidence 22334688899999999888899999999999999999999999975332211100 000 0000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
....+...+..+.+++.+||+.+|++||++.|++..
T Consensus 234 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ---ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ---CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111234568899999999999999999999864
No 265
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.3e-35 Score=297.46 Aligned_cols=246 Identities=28% Similarity=0.504 Sum_probs=197.6
Q ss_pred cCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 392 DGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
++|++.+.||+|+||.||+|.. +++.||+|.+.... ..+.+.+|+.+++.++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4688899999999999999975 67889999986432 346788999999999999999999998764 4789999999
Q ss_pred CCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 472 HGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 472 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
+++|.+++.... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.+||+|||.+......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 999999997643 35788999999999999999999 999999999999999999999999999998754321
Q ss_pred eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
......+..|+|||.+.++.++.++|+||+||++|||++ |+.||......+ .......... .++
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~------~~~------- 218 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--VKECVEKGYR------MEP------- 218 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhCCCC------CCC-------
Confidence 112334578999999988889999999999999999998 889986532211 1111110000 000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
...++..+.+++.+||+.+|++||++.++++.|++
T Consensus 219 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 -----PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -----CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 01235568899999999999999999999998863
No 266
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6.6e-36 Score=310.70 Aligned_cols=195 Identities=26% Similarity=0.392 Sum_probs=169.1
Q ss_pred CCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCC-Cc-----cceeeeeeeecCCeEEE
Q 005760 393 GFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR-HR-----NIIKVISSCSNEEFKAL 465 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~~l 465 (678)
+|.+.+.||+|.||.|.+|. .++++.||||+++.... -..+...|+.+|..++ |. |+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 88999999999999999996 56899999999976532 3455677999999997 33 79999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC--CCcEEEEeecccccc
Q 005760 466 VLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD--NMVAHLSDFGIAKLL 542 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~--~~~~kl~Dfg~~~~~ 542 (678)
|+|.+. .+|+++++..+. .++...+..++.||+.||..|| ..+|||+||||+|||+.+ ...|||+|||.++..
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 999994 499999987653 6889999999999999999999 999999999999999953 348999999999865
Q ss_pred CCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcc
Q 005760 543 TREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEI 597 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~ 597 (678)
...- ..+.-+..|.|||++.+.+|+.+.|||||||+++||++|.+-|.+.
T Consensus 342 ~q~v-----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 342 SQRV-----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CCcc-----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 3221 2566788999999999999999999999999999999998777653
No 267
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.9e-35 Score=301.35 Aligned_cols=268 Identities=21% Similarity=0.311 Sum_probs=198.4
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|+..+.||+|++|.||+|..+ +++.||+|.+..... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67889999999999999999865 789999999865432 2234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++ +|.+++......+++..+..++.|+++||.||| +.+++||||+|+||+++.++.+|++|||+++...... .
T Consensus 85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~--~ 158 (291)
T cd07844 85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS--K 158 (291)
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--c
Confidence 975 999998876667899999999999999999999 9999999999999999999999999999986542211 1
Q ss_pred eeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc---CCcccccccC---
Q 005760 550 IQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL---PISTKEIVDP--- 622 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--- 622 (678)
......++..|+|||...+ ..++.++||||+|+++|||++|+.||.................. +.........
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 1122346788999998765 45788999999999999999999999654321111111111000 0000000000
Q ss_pred ---c--cCCccch-hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 ---N--LLSREDI-NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ---~--~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. ....... ..........++.+++.+|++.+|++||++.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 0000000 00000011256789999999999999999999875
No 268
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=332.46 Aligned_cols=253 Identities=21% Similarity=0.314 Sum_probs=195.6
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeec--CCeEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSN--EEFKA 464 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 464 (678)
..++|.+.+.||+|+||+||+|... ++..||+|++.... ......+..|+.+++.++||||++++++|.+ .+.+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4568999999999999999999854 67889999986432 2345678899999999999999999998854 45789
Q ss_pred EEEEecCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCC----CCCeEEcCCCCCCeeecC----------
Q 005760 465 LVLEYMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASALEYLHFGY----SAQVIHCDLKPSNVLLDD---------- 527 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~dl~~~Nill~~---------- 527 (678)
+||||+++++|.+++... ...+++..++.|+.||+.||+|||+.. ..+|+||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 999999999999999753 235899999999999999999999311 145999999999999964
Q ss_pred -------CCcEEEEeeccccccCCCCCcceeecccCCccccCccccCC--CCCCccchHHHHHHHHHHHHcCCCCCCccc
Q 005760 528 -------NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE--GRVSANGDVYSFGIMLMETFTRKKPTDEIF 598 (678)
Q Consensus 528 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~ell~g~~p~~~~~ 598 (678)
.+.+||+|||++....... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 3458999999997653221 2234568999999998754 458899999999999999999999996422
Q ss_pred CCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 599 NGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. ....+...... +... ....+.++.+|+..||+.+|.+||++.|++.
T Consensus 248 ~----~~qli~~lk~~-------p~lp---------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 N----FSQLISELKRG-------PDLP---------IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred c----HHHHHHHHhcC-------CCCC---------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 2 11111111000 0000 0113456889999999999999999999984
No 269
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.9e-35 Score=296.27 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=195.1
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC-----chhhhHHHHHHHHHhCCCccceeeeeeeec--CCeE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG-----RVFKSFDVECEMMKSIRHRNIIKVISSCSN--EEFK 463 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 463 (678)
.+|+..+.||+|+||.||+|.. .++..||+|++..... +....+.+|+.+++.++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688999999999999999975 4689999999864321 234567889999999999999999998865 4678
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++++||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 89999999999999997655 3788889999999999999999 9999999999999999999999999999987553
Q ss_pred CCCC-cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 544 REDQ-STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 544 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.... ........++..|+|||.+.+..++.++||||+||++|||++|+.||........ .... .. ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~-~~~~-~~-------~~~~~ 228 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA-IFKI-AT-------QPTNP 228 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH-HHHH-hc-------CCCCC
Confidence 2111 1112234578899999999888899999999999999999999999875322111 1100 00 00001
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.. +..+.+.+.+++ +||..+|++||++.|+++
T Consensus 229 ~~----------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 229 QL----------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CC----------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 10 112344566777 688899999999999975
No 270
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=322.70 Aligned_cols=267 Identities=21% Similarity=0.264 Sum_probs=192.5
Q ss_pred HHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCC------ccceeeeeeeec
Q 005760 387 LCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRH------RNIIKVISSCSN 459 (678)
Q Consensus 387 ~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~ 459 (678)
+....++|++.+.||+|+||+||+|.. .+++.||||+++... ........|+++++.++| .+++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 334568899999999999999999975 468899999986432 223445667777777654 458888888865
Q ss_pred C-CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCC--------
Q 005760 460 E-EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNM-------- 529 (678)
Q Consensus 460 ~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~-------- 529 (678)
. +..++|||++ +++|.+++.+.+ .+++..+..++.||+.||+||| + .+|+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccc
Confidence 4 5788999988 778999887654 4889999999999999999999 7 5999999999999998765
Q ss_pred --------cEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc
Q 005760 530 --------VAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE 601 (678)
Q Consensus 530 --------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~ 601 (678)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~ 352 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE 352 (467)
T ss_pred cccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 49999999875432 12234678999999999999999999999999999999999999997533211
Q ss_pred cchhhhhh--cccCCcc---------ccccc------CccCCccc-----hhhHHHHHHHHHHHHHHhhccccCcCCCCC
Q 005760 602 MTLKHWVN--DWLPIST---------KEIVD------PNLLSRED-----INFVAKEQCVSFVFNVAMECTVESPEQRIN 659 (678)
Q Consensus 602 ~~~~~~~~--~~~~~~~---------~~~~~------~~~~~~~~-----~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps 659 (678)
. +..... ...+..+ ..+.+ +....... ..........+.+.+|+.+||++||++|||
T Consensus 353 ~-~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t 431 (467)
T PTZ00284 353 H-LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN 431 (467)
T ss_pred H-HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC
Confidence 0 000000 0000000 00000 00000000 000000112456889999999999999999
Q ss_pred HHHHHH
Q 005760 660 AKEIVT 665 (678)
Q Consensus 660 ~~ell~ 665 (678)
+.|+++
T Consensus 432 a~e~L~ 437 (467)
T PTZ00284 432 ARQMTT 437 (467)
T ss_pred HHHHhc
Confidence 999986
No 271
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.3e-35 Score=297.36 Aligned_cols=251 Identities=23% Similarity=0.363 Sum_probs=198.7
Q ss_pred CCCCCccccCCCceeEEEEEeCC--CcEEEEEEeeccc----------CchhhhHHHHHHHHHh-CCCccceeeeeeeec
Q 005760 393 GFSENNLIGRGSFGSVFKARLGD--GMEVAMKVFNLQY----------GRVFKSFDVECEMMKS-IRHRNIIKVISSCSN 459 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 459 (678)
+|++.+.||+|+||.||+|..+. ++.+|+|.+.... .....++..|+.++.. ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999998654 7889999885321 1223456678887765 799999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 460 EEFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 460 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
.+..++||||+++++|.+++.. ....+++..++.++.|++.|+.||| . .+++|+||+|+||+++.++.++++|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999988743 3346889999999999999999999 5 6899999999999999999999999
Q ss_pred eccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCc
Q 005760 536 FGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS 615 (678)
Q Consensus 536 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (678)
||.+....... ......++..|+|||...++.++.++||||||+++|||++|+.||...... .....+..
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--~~~~~~~~----- 227 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--SLATKIVE----- 227 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--HHHHHHhh-----
Confidence 99997654322 234556888999999999888999999999999999999999998642211 11111100
Q ss_pred ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
...... ....+++++.+++.+||+.||++||++.|+..+++
T Consensus 228 ------~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 ------AVYEPL------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ------ccCCcC------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 000000 00123456889999999999999999999999876
No 272
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.6e-35 Score=296.75 Aligned_cols=267 Identities=23% Similarity=0.304 Sum_probs=202.2
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|++.+.||+|++|.||+|.. .+|+.||+|++.... ......+.+|+.+++.++|||++++++++..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 478889999999999999985 478999999987543 23356788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+ +++|.+++......+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||.+........ .
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-R 155 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-C
Confidence 9 99999999876667899999999999999999999 99999999999999999999999999999976643221 1
Q ss_pred eeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCC---cc---cccccC
Q 005760 550 IQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI---ST---KEIVDP 622 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~ 622 (678)
......++..|+|||.+.+.. ++.++||||+|+++|||++|.+||...... ............. .. ....+.
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhhccCcchh
Confidence 223456889999999876544 689999999999999999998777543221 1111111100000 00 000000
Q ss_pred cc---CCccchhhH-HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NL---LSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~---~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.. ......... ...+.+.++.+++.+|++++|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 000000000 00134577999999999999999999999985
No 273
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7e-35 Score=292.91 Aligned_cols=247 Identities=26% Similarity=0.361 Sum_probs=199.9
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-----CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-----GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
+|+..+.||+|++|.||+|..+ +++.|++|.+.... .+..+.+..|+++++.++||||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999865 78999999986533 22456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
+||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999999998764 4788899999999999999999 9999999999999999999999999999987653322
Q ss_pred CcceeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
......++..|+|||...... ++.++|+||+|+++|+|++|+.||......... ... .... .. +.
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~-~~~-~~~~--~~-----~~-- 222 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV-FKI-GRSK--EL-----PP-- 222 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH-HHH-Hhcc--cC-----CC--
Confidence 223456888999999887766 899999999999999999999998653321111 000 0000 00 00
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+..+++++.+++.+||+.+|++||++.|+++
T Consensus 223 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 --------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 00123456889999999999999999999975
No 274
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.8e-35 Score=301.46 Aligned_cols=260 Identities=24% Similarity=0.325 Sum_probs=202.0
Q ss_pred CCHHHHHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeeec
Q 005760 382 FSYLELCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCSN 459 (678)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 459 (678)
+...++..+.++|.+.+.||+|+||.||+|.. .+++.+|+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 34455666789999999999999999999985 578999999986432 2345677899999998 79999999998864
Q ss_pred C-----CeEEEEEEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcE
Q 005760 460 E-----EFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVA 531 (678)
Q Consensus 460 ~-----~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~ 531 (678)
. +..++|+||+++++|.++++. ....+++..++.++.|++.|+.||| +.+++|+||+|+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCE
Confidence 3 358999999999999998863 2345889999999999999999999 8999999999999999999999
Q ss_pred EEEeeccccccCCCCCcceeecccCCccccCccccCCCC-----CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhh
Q 005760 532 HLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR-----VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKH 606 (678)
Q Consensus 532 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~ 606 (678)
|++|||.+....... .......++..|+|||.+.... ++.++||||+||++|||++|+.||....... ....
T Consensus 168 kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~-~~~~ 244 (291)
T cd06639 168 KLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK-TLFK 244 (291)
T ss_pred EEeecccchhccccc--ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-HHHH
Confidence 999999987654221 1123346788999999876443 6789999999999999999999986533211 1111
Q ss_pred hhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 607 WVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+... ....+.+ +......+.+++.+||+.+|++||++.|+++
T Consensus 245 ~~~~----~~~~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 245 IPRN----PPPTLLH-------------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HhcC----CCCCCCc-------------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1100 0001111 1123345889999999999999999999975
No 275
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.5e-35 Score=298.08 Aligned_cols=252 Identities=26% Similarity=0.344 Sum_probs=200.0
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeeecC------C
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCSNE------E 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------~ 461 (678)
++++|++.+.||+|++|.||+|..+ +++.+++|++..... ..+.+.+|+.+++++ +|+||+++++++.+. +
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 5689999999999999999999864 678999999875433 346788999999998 699999999998654 3
Q ss_pred eEEEEEEecCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecc
Q 005760 462 FKALVLEYMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 538 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~ 538 (678)
..++||||+++++|.+++... ...+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 589999999999999998653 246889999999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCcceeecccCCccccCccccCC-----CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccC
Q 005760 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKE-----GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP 613 (678)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 613 (678)
+...... ........++..|+|||.+.. ..++.++||||+||++|+|++|+.||....... ...+.....
T Consensus 160 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~-- 234 (275)
T cd06608 160 SAQLDST--LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALFKIPRNP-- 234 (275)
T ss_pred ceecccc--hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHHHhhccC--
Confidence 8765322 122334568889999998753 346788999999999999999999986532211 111111100
Q ss_pred CcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 614 ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+. ...+..++.++.+++.+||..||++|||+.|+++
T Consensus 235 -------~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 235 -------PPT--------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -------CCC--------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 000 1112235567889999999999999999999985
No 276
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.8e-35 Score=303.34 Aligned_cols=249 Identities=25% Similarity=0.324 Sum_probs=199.3
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
.|+....||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|||++++++++...+..++|+||++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 344456899999999999975 4789999999876544455678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 102 ~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~ 174 (297)
T cd06659 102 GGALTDIVSQT--RLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKR 174 (297)
T ss_pred CCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--ccc
Confidence 99999988653 3789999999999999999999 9999999999999999999999999999986543221 122
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchh
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIN 631 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (678)
....++..|+|||++.+..++.++||||+||++|||++|+.||......+ ....+..... .. ..
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~---~~-----~~------ 238 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRDSPP---PK-----LK------ 238 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhccCC---CC-----cc------
Confidence 34568899999999988889999999999999999999999986422111 1111111000 00 00
Q ss_pred hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 632 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 632 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.....+.++.+++.+||+.+|++||++.|+++.
T Consensus 239 --~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 239 --NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred --ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 001234557899999999999999999999873
No 277
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.2e-34 Score=300.81 Aligned_cols=195 Identities=23% Similarity=0.348 Sum_probs=159.1
Q ss_pred CccccCCCceeEEEEEeC---CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeee--cCCeEEEEEEecC
Q 005760 397 NNLIGRGSFGSVFKARLG---DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCS--NEEFKALVLEYMP 471 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~ 471 (678)
.++||+|+||.||+|+.+ ++..||+|.+.... ....+.+|+++++.++||||+++++++. .....++|+||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 368999999999999854 45789999886432 2356788999999999999999999884 3567889999986
Q ss_pred CCCHHHHhhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee----cCCCcEEEEeeccc
Q 005760 472 HGSLEKYLHSS--------NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL----DDNMVAHLSDFGIA 539 (678)
Q Consensus 472 ~~~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill----~~~~~~kl~Dfg~~ 539 (678)
+ +|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 787777422 124788889999999999999999 9999999999999999 56789999999999
Q ss_pred cccCCCCCc-ceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcc
Q 005760 540 KLLTREDQS-TIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEI 597 (678)
Q Consensus 540 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~ 597 (678)
+........ .......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 866432211 122345688999999988764 5789999999999999999999998653
No 278
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=6.6e-35 Score=299.80 Aligned_cols=265 Identities=23% Similarity=0.326 Sum_probs=199.6
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCc-----hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGR-----VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
+|++.+.||+|++|.||+|.. .+++.||+|.+...... ....+..|+++++.++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477889999999999999985 47899999999654322 334567899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+ +++|.+++......+++..+..++.||++||+||| +++++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 88999999876546899999999999999999999 9999999999999999999999999999997664322
Q ss_pred CcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc---CC------cc
Q 005760 547 QSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL---PI------ST 616 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~---~~------~~ 616 (678)
. ......++..|+|||.+.+ ..++.++||||+||++|||++|..||......+ .......... .. ..
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 157 R--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred c--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCCCchhhhhhcccc
Confidence 1 1223356788999998754 457889999999999999999987776432211 1111111000 00 00
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
............... ......+.++.+++.+||++||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 234 PDYVEFKPFPPTPLK-QIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccCCcchh-hhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000000000 011234567899999999999999999999987
No 279
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3e-35 Score=299.76 Aligned_cols=257 Identities=24% Similarity=0.339 Sum_probs=200.3
Q ss_pred HHHHHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeee---
Q 005760 384 YLELCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCS--- 458 (678)
Q Consensus 384 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~--- 458 (678)
..++..+.+.|++.+.||+|+||.||+|.. .+++.+|+|++.... .....+..|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 344555678899999999999999999985 578999999986543 2345678899999988 6999999999884
Q ss_pred ---cCCeEEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEE
Q 005760 459 ---NEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS 534 (678)
Q Consensus 459 ---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~ 534 (678)
..+..+++|||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++|+|++|+||+++.++.++|+
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~ 163 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLV 163 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEe
Confidence 2467899999999999999997643 34778888999999999999999 9999999999999999999999999
Q ss_pred eeccccccCCCCCcceeecccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh
Q 005760 535 DFGIAKLLTREDQSTIQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 535 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 609 (678)
|||++....... .......++..|+|||.+. ...++.++|||||||++|||++|+.||.......... ....
T Consensus 164 dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-~~~~ 240 (282)
T cd06636 164 DFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-LIPR 240 (282)
T ss_pred eCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-hHhh
Confidence 999987543211 1223456888999999875 3457889999999999999999999986532211110 0000
Q ss_pred cccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 610 DWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+.. ....++.++.+++.+||+.||.+||++.|+++
T Consensus 241 ---------~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 241 ---------NPPPKL---------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ---------CCCCCC---------cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000000 01134567899999999999999999999975
No 280
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.4e-35 Score=303.45 Aligned_cols=248 Identities=25% Similarity=0.338 Sum_probs=198.4
Q ss_pred CCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
|.....||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 34456799999999999975 47899999998765555566788999999999999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
++|.+++... .+++..+..++.||+.|++||| +++++||||+|+||+++.++.++|+|||++....... ....
T Consensus 104 ~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~ 176 (292)
T cd06658 104 GALTDIVTHT--RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRK 176 (292)
T ss_pred CcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCc
Confidence 9999988654 3788999999999999999999 8999999999999999999999999999987543221 1122
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...++..|+|||...+..++.++||||+|+++|||++|+.||....... ... .+... ..+....
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~-~~~~~--------~~~~~~~------ 240 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMR-RIRDN--------LPPRVKD------ 240 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHH-HHHhc--------CCCcccc------
Confidence 3457889999999988889999999999999999999999986522211 011 01000 0010000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
....+..+.+++.+||..||.+|||+.|+++.
T Consensus 241 --~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 --SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 01234457899999999999999999999864
No 281
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6e-35 Score=295.26 Aligned_cols=253 Identities=25% Similarity=0.398 Sum_probs=200.4
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC------chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG------RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
+|+..+.||+|++|.||+|.. .+++.||+|++..... ...+.+..|+.+++.++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999974 5789999999864321 134678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC-cEEEEeeccccccCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTR 544 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~-~~kl~Dfg~~~~~~~ 544 (678)
|+||+++++|.+++.+.. .+++..+..++.|++.|+.||| +++++|+||+|+||+++.++ .++|+|||.+.....
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999999997654 4788999999999999999999 99999999999999998776 599999999876643
Q ss_pred CCCc--ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 545 EDQS--TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 545 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.... .......++..|+|||.+.+..++.++||||+|+++|+|++|..||........ ......... ....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~----~~~~~ 230 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH--LALIFKIAS----ATTAP 230 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch--HHHHHHHhc----cCCCC
Confidence 3111 112234678899999999888899999999999999999999999864222111 111100000 00000
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+...++++.+++.+|++.+|++||++.|+++
T Consensus 231 ~----------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 231 S----------IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred C----------CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0 11234566889999999999999999999975
No 282
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.4e-35 Score=298.34 Aligned_cols=269 Identities=23% Similarity=0.310 Sum_probs=201.6
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++|++.+.||+|+||.||+|..+ +++.||+|.+... .....+.+.+|+++++.++|+||+++++++.+.+..++|+|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999865 6889999998643 23345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|++++.+..+.... ..++...+..++.|++.|+.||| ..+++|+|++|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 155 (288)
T cd07833 81 YVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA- 155 (288)
T ss_pred cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-
Confidence 99886666555443 45889999999999999999999 89999999999999999999999999999876643322
Q ss_pred ceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchh--hhhhcccCCccccc-ccC--
Q 005760 549 TIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEI-VDP-- 622 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~-- 622 (678)
.......++..|+|||++.+. .++.++||||+|+++|+|++|+.||......+.... .......+...... .++
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 122345678899999999888 789999999999999999999999875322111000 00000000000000 000
Q ss_pred ------ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 ------NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
............+..++.++.+++.+||..+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000000000111224678999999999999999999999875
No 283
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.1e-36 Score=311.31 Aligned_cols=240 Identities=23% Similarity=0.284 Sum_probs=184.8
Q ss_pred ccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhC---CCccceeeeeeeecCCeEEEEEEecCC
Q 005760 400 IGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI---RHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 400 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
||+|+||+||+|+.. +++.||+|++.... .........|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999854 68999999986432 12223344566666654 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.+++.... .+++..+..++.||++|++||| +++|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG-RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTTN 154 (330)
T ss_pred ChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CCcc
Confidence 99999987654 4889999999999999999999 9999999999999999999999999999986532211 1223
Q ss_pred cccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchh
Q 005760 553 QTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIN 631 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (678)
...||..|+|||.+.+. .++.++||||+||++|||++|+.||......+. ....... .. .+ +
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~-~~~i~~~----~~-~~--~--------- 217 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM-YRNIAFG----KV-RF--P--------- 217 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH-HHHHHcC----CC-CC--C---------
Confidence 45689999999988754 478999999999999999999999865322111 1110000 00 00 0
Q ss_pred hHHHHHHHHHHHHHHhhccccCcCCCC----CHHHHHH
Q 005760 632 FVAKEQCVSFVFNVAMECTVESPEQRI----NAKEIVT 665 (678)
Q Consensus 632 ~~~~~~~~~~l~~l~~~cl~~dP~~Rp----s~~ell~ 665 (678)
....+.++.+++.+||+.||.+|| ++.|+++
T Consensus 218 ---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 ---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 011344578999999999999998 4666654
No 284
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7.7e-35 Score=293.73 Aligned_cols=252 Identities=28% Similarity=0.405 Sum_probs=201.7
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCc--hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGR--VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|...+.||+|+||.||+|.. .+++.||+|.+...... ..+.+..|+++++.++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 578889999999999999975 47899999998765442 567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 99999999998754 4788899999999999999999 9999999999999999999999999999997764332211
Q ss_pred e--eecccCCccccCccccCCCC---CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 550 I--QTQTLATIGYMAPEYGKEGR---VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 550 ~--~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
. .....++..|+|||.+.+.. ++.++||||||+++||+++|+.||....... ......... ..+..
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~~~--------~~~~~ 227 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGAG--------HKPPI 227 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHhcC--------CCCCC
Confidence 1 12345788999999988766 8899999999999999999999996532211 111100000 00000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.....++..+.+++.+||+.+|++||++.|++.
T Consensus 228 --------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 --------PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred --------CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 001123455789999999999999999999874
No 285
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=8.7e-35 Score=296.58 Aligned_cols=249 Identities=28% Similarity=0.361 Sum_probs=192.6
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHH-HHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEM-MKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++|++.+.||+|+||.||+|..+ +|+.||+|+++.... .....+..|... ++..+||||+++++++...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999864 799999999865422 223445555554 667789999999999999999999999
Q ss_pred ecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 469 YMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSA-QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 469 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
|++ ++|.+++.. ....+++..++.++.|++.|++||| ++ +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 588887754 2335889999999999999999999 76 999999999999999999999999999876532
Q ss_pred CCCcceeecccCCccccCccccCC----CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKE----GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (678)
. .......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||.................
T Consensus 157 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------- 224 (283)
T cd06617 157 S---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP--------- 224 (283)
T ss_pred c---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC---------
Confidence 1 12233457889999998765 4468899999999999999999999864322211111111100
Q ss_pred cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 621 DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+... ...++.++.+++.+||..+|++||++.|+++
T Consensus 225 ~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 225 SPQLP---------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCCCC---------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 0124566889999999999999999999986
No 286
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.6e-35 Score=299.93 Aligned_cols=266 Identities=24% Similarity=0.369 Sum_probs=200.0
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++|+..+.||+|+||.||+|..+ +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999865 689999999754322 234567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|++++++.++..... .+++..+..++.|++.|++||| +.+++|+|++|+||++++++.++++|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-- 154 (286)
T cd07846 81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-- 154 (286)
T ss_pred cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--
Confidence 999998888776543 4899999999999999999999 8999999999999999999999999999987654322
Q ss_pred ceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCcc--chhhhhhcccCCcccc-------
Q 005760 549 TIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEM--TLKHWVNDWLPISTKE------- 618 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~------- 618 (678)
.......++..|+|||+..+. .++.++||||||+++|||++|+.||......+. ....+..... .....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 233 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLI-PRHQEIFQKNPL 233 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCc-hhhHHHhccchH
Confidence 122334578899999987653 478899999999999999999998864322110 0000000000 00000
Q ss_pred ---cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 619 ---IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 619 ---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+........ ......++..+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 234 FAGMRLPEVKEIEPL-EKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhccccccccCcchH-HHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000110000000 0011245677999999999999999999999875
No 287
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.7e-35 Score=293.25 Aligned_cols=247 Identities=24% Similarity=0.399 Sum_probs=199.4
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|+..+.||+|+||.||+|.. .+++.+|+|.+.... ......+..|+++++.++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999999975 478999999986542 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC-CcEEEEeeccccccCCCCC
Q 005760 470 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 470 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~-~~~kl~Dfg~~~~~~~~~~ 547 (678)
+++++|.+++.... ..+++..+..++.|++.|++||| +++++|+||+|+||+++++ +.+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999997643 35788999999999999999999 9999999999999999855 468999999997664322
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ....... .....+
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~~~~~~---~~~~~~-------- 221 (256)
T cd08220 157 --KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--LVLKIMS---GTFAPI-------- 221 (256)
T ss_pred --cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--HHHHHHh---cCCCCC--------
Confidence 1223457889999999988888999999999999999999999986532211 1111100 000000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+..++.++.+++.+||+.+|++|||+.|++.
T Consensus 222 -------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 222 -------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -------CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0124556889999999999999999999975
No 288
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-34 Score=294.09 Aligned_cols=255 Identities=26% Similarity=0.328 Sum_probs=199.0
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeec--CCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSN--EEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 467 (678)
++|+..+.||.|++|.||+|.. .+++.+|+|.+..... .....+.+|+++++.++||||+++++++.+ .+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 4678889999999999999986 4689999999875422 345678899999999999999999998854 44789999
Q ss_pred EecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 468 EYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 468 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
||+++++|.+++.. ....++...+..++.|++.|++||| +.+++|+||+|.||+++.++.++++|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999988753 2345788899999999999999999 99999999999999999999999999999865432
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccC---CccchhhhhhcccCCccccccc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFN---GEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
.. .....++..|+|||.+.+..++.++||||+||++|+|++|+.||..... .......+...... ..+.+
T Consensus 158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 230 (287)
T cd06621 158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN---PELKD 230 (287)
T ss_pred cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc---hhhcc
Confidence 21 1234577889999999888899999999999999999999999976422 11112222111110 00000
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. ...+ ...++.+.+++.+||+.+|++|||+.|+++
T Consensus 231 ~-----~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 231 E-----PGNG----IKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred C-----CCCC----CchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0 0000 113456889999999999999999999987
No 289
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-35 Score=325.26 Aligned_cols=263 Identities=27% Similarity=0.424 Sum_probs=214.8
Q ss_pred HHhhcCCCCCccccCCCceeEEEEEeC----C----CcEEEEEEeecccC-chhhhHHHHHHHHHhC-CCccceeeeeee
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKARLG----D----GMEVAMKVFNLQYG-RVFKSFDVECEMMKSI-RHRNIIKVISSC 457 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~~~----~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 457 (678)
+...++..+.+.+|+|+||.|++|... . ...||||.++.... ...+.+..|+++|+.+ +|+||+.++|+|
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 344455567779999999999999632 1 45699999875433 4567889999999998 599999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCC
Q 005760 458 SNEEFKALVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSN 522 (678)
Q Consensus 458 ~~~~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~N 522 (678)
...+..++|+||+..|+|.++++..+ ..+.......++.|||.|++||+ +.++||||+.++|
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARN 448 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhh
Confidence 99999999999999999999999877 34888899999999999999999 9999999999999
Q ss_pred eeecCCCcEEEEeeccccccCCCCCccee-ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCC
Q 005760 523 VLLDDNMVAHLSDFGIAKLLTREDQSTIQ-TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNG 600 (678)
Q Consensus 523 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~ 600 (678)
|+++.+..+||+|||+|+...+.+..... +...-+..|||||.+....|+.++|||||||+|||++| |..||.+....
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 99999999999999999876554444322 22125677999999999999999999999999999999 88898762211
Q ss_pred ccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 601 EMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
..+.++++ .+.+...+..|+.+++++|+.||+.+|++||++.|+++.++....
T Consensus 529 -~~l~~~l~------------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 529 -EELLEFLK------------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred -HHHHHHHh------------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 11122222 122333445688899999999999999999999999999999643
No 290
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1e-34 Score=299.25 Aligned_cols=255 Identities=23% Similarity=0.284 Sum_probs=198.7
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46888999999999999999854 68899999986543 223456778999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++++|.+++...+ .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 9999999999997664 4788889999999999999999 99999999999999999999999999999863211000
Q ss_pred -------------cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCC
Q 005760 548 -------------STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI 614 (678)
Q Consensus 548 -------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 614 (678)
........++..|+|||.+.+..++.++|+|||||++|||++|..||.+....+ .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-~~~~~~~~~--- 232 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQVISDD--- 232 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcc---
Confidence 001112357788999999988889999999999999999999999986532211 111111000
Q ss_pred cccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 615 STKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
...+.. ...++.++.+++.+||+.||++||++.++.+.|+
T Consensus 233 ----~~~~~~----------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 233 ----IEWPEG----------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred ----cCCCCc----------cccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 000000 0124556889999999999999999655555444
No 291
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-34 Score=296.36 Aligned_cols=253 Identities=29% Similarity=0.350 Sum_probs=206.0
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
..++.|+..+.||+|++|.||+|..+ ++..|++|++..... ..+.+..|+++++.++|+|++++++++...+..++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 45677888999999999999999865 789999999976543 4567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++++|.+++......+++..+..++.|++.|++||| +.+++|+|++|+||+++.++.++|+|||++........
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999999877546899999999999999999999 99999999999999999999999999999865532211
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
......++..|+|||.+.+..++.++|+|||||++|+|++|+.||....... ......... ..
T Consensus 172 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~~~~~~----~~---------- 234 (286)
T cd06614 172 --KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFLITTKG----IP---------- 234 (286)
T ss_pred --hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcC----CC----------
Confidence 1223457789999999988889999999999999999999999986422211 111110000 00
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.......++.++.+++.+||+.+|.+||++.|+++
T Consensus 235 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 235 ---PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ---CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 00011224566889999999999999999999985
No 292
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.6e-34 Score=289.82 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=205.2
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
++|++.+.||+|++|.||+|... +++.||+|++..... .....+..|+++++.++|+|++++++++...+..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999865 699999999876543 4467789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+++++|.+++.... .+++..+..++.|+++|++||| + .+++|+||+|+||+++.++.++++|||.+.........
T Consensus 81 ~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 81 MDGGSLADLLKKVG-KIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 99999999998653 5899999999999999999999 8 99999999999999999999999999998766432221
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
.....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ...+......... .+..
T Consensus 157 --~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~-----~~~~---- 223 (264)
T cd06623 157 --CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDGP-----PPSL---- 223 (264)
T ss_pred --ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcCC-----CCCC----
Confidence 12345788999999999888999999999999999999999998764321 1111111110000 0000
Q ss_pred chhhHHHHH-HHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 629 DINFVAKEQ-CVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 629 ~~~~~~~~~-~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
... ++..+.+++.+||..+|++||++.|+++.
T Consensus 224 ------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 224 ------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011 45568899999999999999999999874
No 293
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=9e-35 Score=295.49 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=198.6
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCC---CccceeeeeeeecCCeEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIR---HRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~ 467 (678)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++ |||++++++++.+.+..++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999985 578999999986542 334567888999999986 999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++++|.++++.. .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 999999999998764 4889999999999999999999 9999999999999999999999999999997764332
Q ss_pred cceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 548 STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
.......++..|+|||.+.++ .++.++|+|||||++|+|++|..||....... ...... ....+....
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-----~~~~~~-----~~~~~~~~~ 224 (277)
T cd06917 156 -SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR-----AMMLIP-----KSKPPRLED 224 (277)
T ss_pred -cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh-----hhhccc-----cCCCCCCCc
Confidence 222344688899999987654 46889999999999999999999986532211 100000 000011100
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+.++.+++.+||+.||++||++.|+++
T Consensus 225 ---------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 225 ---------NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ---------ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 113456889999999999999999999976
No 294
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.2e-34 Score=298.95 Aligned_cols=248 Identities=29% Similarity=0.388 Sum_probs=197.7
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
....|+..+.||+|+||.||+|... +++.||+|.+..... +..+.+.+|+++++.++|||++++.+++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 3456888999999999999999854 789999999864322 233568889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
|+||++ |++.+++......+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 93 v~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 93 VMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred EHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 999996 5888877655556899999999999999999999 999999999999999999999999999998654321
Q ss_pred CCcceeecccCCccccCccccC---CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 546 DQSTIQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
....++..|+|||.+. .+.++.++||||||+++|||++|+.||........ ... .... ..+
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-~~~-~~~~--------~~~ 232 (307)
T cd06607 169 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYH-IAQN--------DSP 232 (307)
T ss_pred ------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-HHH-HhcC--------CCC
Confidence 2345778899999874 45688999999999999999999999864321110 000 0000 000
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.. ....++.++.+++.+||+.+|++||++.+++..
T Consensus 233 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 233 TL---------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CC---------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 012245678999999999999999999999873
No 295
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=9.2e-35 Score=301.31 Aligned_cols=252 Identities=27% Similarity=0.353 Sum_probs=200.3
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|+..+.||+|++|.||+|... +++.||+|.+..... ...+.+..|+++++.++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999854 689999999875432 24456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 468 EYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
||+.+++|.+++.... ..+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999987542 45889999999999999999999 9999999999999999999999999999987543211
Q ss_pred Cc---------------------------ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccC
Q 005760 547 QS---------------------------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFN 599 (678)
Q Consensus 547 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~ 599 (678)
.. .......|+..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 011133578899999999988899999999999999999999999865332
Q ss_pred CccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC----HHHHHH
Q 005760 600 GEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN----AKEIVT 665 (678)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps----~~ell~ 665 (678)
.. ....... ...... .....+.++.+++.+||+.||++||+ +.|++.
T Consensus 238 ~~-~~~~~~~------------~~~~~~------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 DE-TFSNILK------------KEVTFP------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HH-HHHHHhc------------CCccCC------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 21 1111100 000000 00114566899999999999999999 777765
No 296
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.5e-34 Score=287.66 Aligned_cols=249 Identities=29% Similarity=0.403 Sum_probs=204.0
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
.|+..+.||+|++|.||+|... ++..+++|++........+.+.+|+++++.++||+++++++++...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999864 789999999976554456788999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++......+++..+..++.|++.|+++|| ..+++|+||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~ 154 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---R 154 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---c
Confidence 99999999876556899999999999999999999 89999999999999999999999999999876643321 2
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchh
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIN 631 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (678)
....++..|+|||.+.+..++.++||||+|+++|+|++|+.||.......... .... .......
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~----~~~~~~~----------- 218 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF-KIAT----NGPPGLR----------- 218 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH-HHHh----cCCCCcC-----------
Confidence 34568889999999988889999999999999999999999986532211110 0000 0000000
Q ss_pred hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 632 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 632 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....++.++.+++.+||+.||++|||+.|+++
T Consensus 219 --~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 219 --NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 01112456889999999999999999999875
No 297
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.9e-35 Score=298.29 Aligned_cols=244 Identities=25% Similarity=0.301 Sum_probs=199.2
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999854 68999999986432 234466888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++++|.+++.... .++...+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 9999999999998764 5889999999999999999999 999999999999999999999999999998765432
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||...... ........... ..
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~----------~~--- 217 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-QIYEKILEGKV----------RF--- 217 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCCc----------cC---
Confidence 23446889999999998888899999999999999999999998653311 11111110000 00
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
+...+..+.+++.+||+.||.+|+ +++|+++
T Consensus 218 -------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 218 -------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 011245578999999999999999 7777763
No 298
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.5e-34 Score=291.84 Aligned_cols=250 Identities=23% Similarity=0.325 Sum_probs=195.3
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC-----chhhhHHHHHHHHHhCCCccceeeeeeeecC--CeE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG-----RVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFK 463 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 463 (678)
.+|++.+.||+|+||.||.|.. .++..||+|.+..... ...+.+.+|+++++.++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4788899999999999999985 4689999999854321 2345678899999999999999999988663 567
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++||||+++++|.+++.+.. .+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 89999999999999997654 3788888999999999999999 9999999999999999999999999999987553
Q ss_pred CCCCc-ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 544 REDQS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 544 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
..... .......++..|+|||.+.+..++.++|||||||++|||++|+.||....... ....... .. ..+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~----~~----~~~ 228 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-AIFKIAT----QP----TNP 228 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-HHHHHhc----CC----CCC
Confidence 21111 11223458889999999988889999999999999999999999986532111 1111000 00 000
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+...+..+.+++.+|+. +|++||+++|+++
T Consensus 229 ~----------~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 229 V----------LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred C----------CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0 112234557789999995 9999999999875
No 299
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.2e-34 Score=297.20 Aligned_cols=267 Identities=22% Similarity=0.269 Sum_probs=198.6
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecC--CeEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFKALV 466 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 466 (678)
++|+..+.||+|+||.||+|..+ +++.+|+|.++.... .....+.+|+.+++.++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57888999999999999999865 688999999875432 2233567899999999999999999998776 889999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
+||+++ +|.+++......+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 999975 999998876656899999999999999999999 9999999999999999999999999999998664332
Q ss_pred CcceeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccC---C------cc
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLP---I------ST 616 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~---~------~~ 616 (678)
.......++..|+|||.+.+.. ++.++|+||+|+++|||++|..||........ .......+.. . ..
T Consensus 161 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 --KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred --cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHhhcc
Confidence 1223345788899999887654 68899999999999999999999875322111 1110000000 0 00
Q ss_pred cccccCccCCcc--chhhHHHHH-HHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 KEIVDPNLLSRE--DINFVAKEQ-CVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 ~~~~~~~~~~~~--~~~~~~~~~-~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
............ ......+.. .++.+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000 000000001 3566889999999999999999999985
No 300
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-36 Score=282.94 Aligned_cols=242 Identities=21% Similarity=0.287 Sum_probs=199.5
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
..++|+..+.||+|.||.|-+++- .+|+.+|+|+++... ......-..|-++++..+||.+..+...|+..+.+|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 456899999999999999999974 489999999997642 2334555678999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
||||+.||.|.-++.+.+. +++.....+-.+|+.||.||| +++||.||+|.+|.|+|.+|++||+|||+++.-.
T Consensus 246 VMeyanGGeLf~HLsrer~-FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERV-FSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred EEEEccCceEeeehhhhhc-ccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc--
Confidence 9999999999988877654 777788889999999999999 9999999999999999999999999999997533
Q ss_pred CCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
.........+|||.|+|||++....|+.++|.|.+||++|||++|+.||+...-.. +-..+ -+.++.-|.
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k--LFeLI------l~ed~kFPr-- 389 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK--LFELI------LMEDLKFPR-- 389 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH--HHHHH------HhhhccCCc--
Confidence 23334556889999999999999999999999999999999999999998633221 11100 011111222
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCC
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRI 658 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 658 (678)
..++++..|+...+.+||.+|.
T Consensus 390 -----------~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 390 -----------TLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -----------cCCHHHHHHHHHHhhcChHhhc
Confidence 2345677899999999999998
No 301
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-34 Score=295.65 Aligned_cols=248 Identities=26% Similarity=0.335 Sum_probs=199.5
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
.|...+.||+|++|.||+|.. .+++.+++|++........+.+.+|+.+++.++|||++++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 455568999999999999985 5789999999875544455678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++... .+++..+..++.|++.|++||| +++++||||+|+||+++.++.++++|||.+...... ....
T Consensus 100 ~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~--~~~~ 172 (285)
T cd06648 100 GGALTDIVTHT--RMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE--VPRR 172 (285)
T ss_pred CCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccC--Cccc
Confidence 99999999873 4888999999999999999999 999999999999999999999999999988654322 1122
Q ss_pred ecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchh
Q 005760 552 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIN 631 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (678)
....+++.|+|||...+..++.++||||+||++|||++|+.||....... ... ...... .+...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-~~~-~~~~~~--------~~~~~------ 236 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-AMK-RIRDNL--------PPKLK------ 236 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-HHH-HHHhcC--------CCCCc------
Confidence 33568899999999988889999999999999999999999986522111 111 111000 00000
Q ss_pred hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 632 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 632 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....++..+.+++.+||+++|++||++.|+++
T Consensus 237 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 237 --NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 00113456889999999999999999999985
No 302
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.6e-34 Score=288.84 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=200.4
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeec--CCeEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSN--EEFKALVL 467 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 467 (678)
+|++.+.||.|+||.||+|.. .+++.||+|.+.... ....+.+..|+++++.++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999974 578899999986432 2334667889999999999999999997753 45678999
Q ss_pred EecCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 468 EYMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASALEYLHFGY--SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 468 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
||+++++|.+++... ...+++..++.++.|++.|++|||..+ +.+++|+||+|+||+++.++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998753 346889999999999999999999544 678999999999999999999999999999876
Q ss_pred CCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 543 TREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
..... ......+++.|+|||.+.+..++.++|+||||+++|+|++|+.||..... ......+.... . +
T Consensus 161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~---~-----~ 228 (265)
T cd08217 161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLASKIKEGK---F-----R 228 (265)
T ss_pred cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHHHHhcCC---C-----C
Confidence 43221 12334688999999999988899999999999999999999999875331 11111111000 0 0
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+...+.++.+++.+|++.+|++||++.|+++
T Consensus 229 ~----------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 229 R----------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred C----------CccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 01134556889999999999999999999986
No 303
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.5e-34 Score=294.96 Aligned_cols=264 Identities=25% Similarity=0.336 Sum_probs=196.9
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|+..+.||.|++|.||+|+.. +|+.||+|.+.... ......+..|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999854 78999999986442 22345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+. ++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+|++|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 96 58998886543 45789999999999999999999 99999999999999999999999999999875532211
Q ss_pred ceeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc-CCc-c----ccc--
Q 005760 549 TIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL-PIS-T----KEI-- 619 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~-~~~-~----~~~-- 619 (678)
......++..|+|||...+.. ++.++||||||+++|||++|+.||......+ ...+...... +.. . ..+
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 156 -TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred -ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHH
Confidence 122334678899999876654 5889999999999999999999986532211 1111111000 000 0 000
Q ss_pred ---ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 ---VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..+.... ..... .....++++.+++.+||+.||++||++.|+++
T Consensus 234 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 234 YKPSFPKWAR-QDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHhhcccccc-cCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000 00000 01124566889999999999999999999975
No 304
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.5e-34 Score=292.20 Aligned_cols=247 Identities=27% Similarity=0.384 Sum_probs=199.5
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
-|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+..++.++||||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 467788999999999999975 478999999986432 233467888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 471 PHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 471 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
++++|.+++... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++....... ..
T Consensus 85 ~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06641 85 GGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch--hh
Confidence 999999998754 4789999999999999999999 9999999999999999999999999999987654321 11
Q ss_pred eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 551 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
.....++..|+|||.+.+..++.++|+||+||++|+|++|..||....... ....+.... .+..
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~--------~~~~------ 221 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VLFLIPKNN--------PPTL------ 221 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HHHHHhcCC--------CCCC------
Confidence 223457889999999988888999999999999999999999986532211 111110000 0000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
...++.++.+++.+||+.+|++||++.|+++.
T Consensus 222 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 ----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ----CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 01245568899999999999999999999984
No 305
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.3e-34 Score=291.30 Aligned_cols=260 Identities=21% Similarity=0.262 Sum_probs=194.4
Q ss_pred CCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC-chhhhHHHHHHHHHhCC-CccceeeeeeeecC--CeEEEEEE
Q 005760 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIR-HRNIIKVISSCSNE--EFKALVLE 468 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e 468 (678)
|++.+.||+|+||.||+|.. .+++.||+|+++.... ........|+.+++++. |||++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56788999999999999985 4789999999865422 22234457888888885 99999999999877 88999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|++ +++.+++......+++..+..++.|++.||.||| +.+++||||+|+||+++. +.+||+|||++........
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 996 5888888766556899999999999999999999 999999999999999999 9999999999976543221
Q ss_pred ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCC------------c
Q 005760 549 TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI------------S 615 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~------------~ 615 (678)
.....++..|+|||.+.. +.++.++||||+||++|||++|+.||......+ ........... .
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 155 --YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred --cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCCCHHHHHhhcccc
Confidence 123457889999997644 557889999999999999999999996532211 11111111100 0
Q ss_pred ccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 616 TKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
......+...... .. ......+.++.+++.+||+++|++||++.|+++
T Consensus 231 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTG-LR-KLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCccccccc-HH-HHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000111100000 00 011245778999999999999999999999975
No 306
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.2e-34 Score=297.37 Aligned_cols=269 Identities=21% Similarity=0.291 Sum_probs=197.5
Q ss_pred CCCCCccccCCCceeEEEEEeC---CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecC--CeEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG---DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFKA 464 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 464 (678)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999854 57999999997632 33446778899999999999999999999887 8899
Q ss_pred EEEEecCCCCHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC----CCcEEEEee
Q 005760 465 LVLEYMPHGSLEKYLHSSN----YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD----NMVAHLSDF 536 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~----~~~~kl~Df 536 (678)
+||||+++ ++.+++.... ..++...++.++.|++.|++||| +++++||||+|+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 7777664322 25788999999999999999999 999999999999999999 999999999
Q ss_pred ccccccCCCCC-cceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCcc--------chhh
Q 005760 537 GIAKLLTREDQ-STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEM--------TLKH 606 (678)
Q Consensus 537 g~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~--------~~~~ 606 (678)
|++........ ........++..|+|||.+.+. .++.++|||||||++|||++|+.||........ ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986543322 1122344678899999987664 578999999999999999999999975433220 0000
Q ss_pred hhhcccCC------------cccc---cccCccCCccchhhHHHH--HHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 607 WVNDWLPI------------STKE---IVDPNLLSREDINFVAKE--QCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 607 ~~~~~~~~------------~~~~---~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+...... .... .................. ....++.+++.+|+++||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000000 0000 000000000000001111 34567899999999999999999999975
No 307
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2e-34 Score=297.80 Aligned_cols=268 Identities=25% Similarity=0.308 Sum_probs=198.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecC--CeEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFKA 464 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 464 (678)
..++|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.+++.++|+|++++++++.+. +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 457899999999999999999985 4789999999865432 2223456799999999999999999998654 5689
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+||||+.+ +|.+++......+++..+..++.|++.|++||| +.+++||||+|+||+++.++.+||+|||++.....
T Consensus 85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 99999965 899988876566899999999999999999999 99999999999999999999999999999986643
Q ss_pred CCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc----c
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE----I 619 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~ 619 (678)
... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .+.... ......... .
T Consensus 161 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 236 (309)
T cd07845 161 PAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLII-QLLGTPNESIWPGF 236 (309)
T ss_pred ccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HhcCCCChhhchhh
Confidence 221 1223345788999998865 457899999999999999999999997533211 111111 100000000 0
Q ss_pred ccCc-----cCCccchhhH--HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 VDPN-----LLSREDINFV--AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ~~~~-----~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+.. .......... .....++++.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 0000000000 01123667889999999999999999999985
No 308
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-36 Score=293.44 Aligned_cols=245 Identities=22% Similarity=0.307 Sum_probs=199.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
..+.|+.-+.||+||||.||-.+.+ +|+-+|.|.+... ..........|.+|++.++.++||.+-..|+.++.+++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3467888999999999999998754 7999999988543 22333455789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 466 VLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
|+..|+||||.-++...+ ..+++..+..++.+|+-||++|| +.+||.||+||+|||+|+.|+|+|+|.|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999998886554 36899999999999999999999 99999999999999999999999999999987753
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc--cchhhhhhcccCCcccccccC
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE--MTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 622 (678)
. ......+||.+|||||++.++.|+...|.||+||++|||+.|+.||-.-.+.. ..+.+.+ ..|+
T Consensus 340 g---~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~----------~~~~ 406 (591)
T KOG0986|consen 340 G---KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRT----------LEDP 406 (591)
T ss_pred C---CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHH----------hcch
Confidence 2 33345689999999999999999999999999999999999999986422210 0111100 0111
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN 659 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps 659 (678)
..+ ++..++++.++....|++||++|..
T Consensus 407 ~ey---------~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 407 EEY---------SDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred hhc---------ccccCHHHHHHHHHHHccCHHHhcc
Confidence 111 1346777899999999999999974
No 309
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.6e-35 Score=299.47 Aligned_cols=249 Identities=27% Similarity=0.364 Sum_probs=207.0
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
....|.+.+.||+|.|+.|.+|+. .++..||+|.+..... ...+.+.+|+++|..++|||||+++++...+..+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 356789999999999999999974 4799999999865432 2335588999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+.+|.+.+++.+.+. ..+..+..++.|+.++++||| ++.|||||||++||+++.+.++||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--- 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFD--- 206 (596)
T ss_pred EEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeec---
Confidence 999999999999998876 445888899999999999999 9999999999999999999999999999998875
Q ss_pred CcceeecccCCccccCccccCCCCC-CccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
........+|++.|.|||+..+.+| ++.+|+||+|+++|-|+.|..||++..-.+ +-++.+.
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-----------------Lr~rvl~ 269 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-----------------LRPRVLR 269 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-----------------ccchhee
Confidence 3334456789999999999998876 688999999999999999999998633221 1112222
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
......+. .+.+..+++++++..+|.+|++.+++.+.
T Consensus 270 gk~rIp~~----ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 270 GKYRIPFY----MSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred eeecccce----eechhHHHHHHhhccCccccCCHHHhhhh
Confidence 22222221 23446689999999999999999998763
No 310
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=6e-34 Score=287.44 Aligned_cols=248 Identities=21% Similarity=0.254 Sum_probs=194.0
Q ss_pred HHHHhhcCCCCCccc--cCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeeecCC
Q 005760 386 ELCRATDGFSENNLI--GRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEE 461 (678)
Q Consensus 386 ~~~~~~~~~~~~~~i--g~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 461 (678)
+.....++|++.+.+ |+|+||.||++.. .++..+|+|.+....... .|+.....+ +|||++++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence 334445677777777 9999999999975 478899999986432211 122222222 6999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC-cEEEEeecccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM-VAHLSDFGIAK 540 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~-~~kl~Dfg~~~ 540 (678)
..++||||+++++|.+++.... .+++..+..++.|+++|+.||| +.+++||||+|+||+++.++ .++++|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 9999999999999999998765 5899999999999999999999 99999999999999999988 99999999987
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccc
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (678)
..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||............+..... . ..
T Consensus 159 ~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~---~~- 227 (267)
T PHA03390 159 IIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ-K---KL- 227 (267)
T ss_pred ecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc-c---cC-
Confidence 55322 1235788999999999888999999999999999999999999754433333232222110 0 00
Q ss_pred cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC-HHHHHH
Q 005760 621 DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN-AKEIVT 665 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~ell~ 665 (678)
......++.+.+++.+||+.+|.+||+ ++|+++
T Consensus 228 ------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 228 ------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ------------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 001134566889999999999999996 588874
No 311
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.2e-34 Score=289.44 Aligned_cols=247 Identities=26% Similarity=0.341 Sum_probs=200.9
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
+|++.+.||.|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999865 68999999997542 2345778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|+.+++|.+++... ..+++..+..++.|+++|+.||| +.+++|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999999766 35889999999999999999999 9999999999999999999999999999987654322
Q ss_pred ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCcc
Q 005760 549 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 628 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (678)
......++..|+|||...+..++.++|+||+|+++|+|++|..||...... ........... ....
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~---~~~~-------- 220 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQET---ADVL-------- 220 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhcc---cccc--------
Confidence 223456788999999998888999999999999999999999998754321 11111111000 0000
Q ss_pred chhhHHHHHHHHHHHHHHhhccccCcCCCCCH--HHHH
Q 005760 629 DINFVAKEQCVSFVFNVAMECTVESPEQRINA--KEIV 664 (678)
Q Consensus 629 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~--~ell 664 (678)
.+...+.++.+++.+||+.||.+||++ +|++
T Consensus 221 -----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 221 -----YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -----CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 011234668899999999999999999 6654
No 312
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.2e-34 Score=292.44 Aligned_cols=263 Identities=27% Similarity=0.341 Sum_probs=196.9
Q ss_pred CCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
|++.+.||.|++|.||+|.. .+|+.||+|++..... ...+.+.+|+++++.++|||++++++++.+.+..++++||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 66788999999999999985 4799999999875432 23356788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+ ++|.+++.... ..+++..+..++.|+++||+||| +++++||||+|+||+++.++.++++|||.+........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--
Confidence 5 68999987654 35889999999999999999999 89999999999999999999999999999875532211
Q ss_pred eeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc-CC--------ccccc
Q 005760 550 IQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL-PI--------STKEI 619 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~-~~--------~~~~~ 619 (678)
......++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... ......+... +. .....
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhh
Confidence 12233568889999987664 46889999999999999999999986532211 1111111000 00 00000
Q ss_pred c--cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 V--DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. -+.... ... .......+.++.+++.+||+.||++||+++|+++
T Consensus 234 ~~~~~~~~~-~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 234 KPTFPKWAR-QDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhcccccc-cch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 000000 000 0011234467889999999999999999999975
No 313
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.8e-34 Score=285.27 Aligned_cols=251 Identities=28% Similarity=0.372 Sum_probs=204.3
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecC--CeEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFKALVL 467 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 467 (678)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++.+.+. +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999865 789999999865542 3467788999999999999999999999888 8899999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+|++|+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999999998765 6899999999999999999999 89999999999999999999999999999987654332
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
........++..|+|||...+..++.++||||+|+++|+|++|..||............. ........
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~--------- 224 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKI---GSSGEPPE--------- 224 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhc---cccCCCcC---------
Confidence 112344568889999999988889999999999999999999999987643111100000 00000000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+...+.++.+++.+|++.+|++||++.|+++
T Consensus 225 ------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 ------IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ------CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 01122566889999999999999999999985
No 314
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7e-34 Score=290.07 Aligned_cols=266 Identities=23% Similarity=0.316 Sum_probs=199.3
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
+|+..+.||.|++|.||+|+.. +|+.||+|+++.... ...+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788999999999999999864 789999999875533 23456778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 471 PHGSLEKYLHSSN--YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 471 ~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
++ +|.+++.... ..+++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||++.......
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 75 8988886543 35889999999999999999999 8999999999999999999999999999997553221
Q ss_pred ceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc---CCccccccc---
Q 005760 549 TIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL---PISTKEIVD--- 621 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--- 621 (678)
.......++..|+|||.+.+. .++.++||||+||++|+|++|+.||.+....+. ......... ...+..+.+
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhHHHHhcCch
Confidence 112334568899999987654 468899999999999999999999875432211 111110000 000000000
Q ss_pred --CccCCccchh-hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 --PNLLSREDIN-FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 --~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.......... .......+.++.+++.+|++.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000 0011234677899999999999999999999875
No 315
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.7e-34 Score=293.16 Aligned_cols=259 Identities=20% Similarity=0.288 Sum_probs=185.6
Q ss_pred hcCCCCCccccCCCceeEEEEEeCC----CcEEEEEEeecccCchh-----------hhHHHHHHHHHhCCCccceeeee
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGD----GMEVAMKVFNLQYGRVF-----------KSFDVECEMMKSIRHRNIIKVIS 455 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~~~~ 455 (678)
.++|.+.+.||+|+||.||+|...+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999998643 45667776433222110 11122334455678999999998
Q ss_pred eeecCC----eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcE
Q 005760 456 SCSNEE----FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVA 531 (678)
Q Consensus 456 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~ 531 (678)
++.... ..++++|++.. ++.+.+.... ..++..+..++.|++.|++||| +++|+||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcE
Confidence 765433 34678887743 6766665443 3577888999999999999999 9999999999999999999999
Q ss_pred EEEeeccccccCCCCCc-----ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhh
Q 005760 532 HLSDFGIAKLLTREDQS-----TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKH 606 (678)
Q Consensus 532 kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~ 606 (678)
+|+|||+++.+...... .......||+.|+|||+..+..++.++||||+||++|||++|+.||............
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 99999999766432211 1123346999999999999999999999999999999999999999764222111110
Q ss_pred hhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 607 WVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
...++. ..+..+. .....++.++.+++..|++.+|++||+++++++.|
T Consensus 246 ~~~~~~----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 AKCDFI----KRLHEGK---------IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHHHHH----HHhhhhh---------hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000000 0000000 01123466789999999999999999999999876
No 316
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.4e-34 Score=291.95 Aligned_cols=266 Identities=25% Similarity=0.334 Sum_probs=199.7
Q ss_pred CCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC--CeEEEEEE
Q 005760 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFKALVLE 468 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 468 (678)
|++.+.||+|++|.||+|... +++.+|+|++.... ......+.+|+++++.++|||++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999865 68999999997653 33445678899999999999999999999887 88999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|+++ +|.+++......+++..+..++.|+++|++||| +.+++|+||+|+||++++++.+|++|||++........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~- 155 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS- 155 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-
Confidence 9975 899998776556899999999999999999999 89999999999999999999999999999986643321
Q ss_pred ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc---CCccccccc---
Q 005760 549 TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL---PISTKEIVD--- 621 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--- 621 (678)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .......... ........+
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchh
Confidence 12233456788999997664 457899999999999999999999987533211 1111111000 000000000
Q ss_pred -----CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 -----PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 -----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+...............++.++.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000000011113678999999999999999999999976
No 317
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.4e-34 Score=292.59 Aligned_cols=265 Identities=23% Similarity=0.305 Sum_probs=195.3
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCC-CccceeeeeeeecCCe-----
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEF----- 462 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~----- 462 (678)
++|++.+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4688899999999999999985 4789999999865432 23456788999999995 6999999999876655
Q ss_pred EEEEEEecCCCCHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-CCcEEEEeec
Q 005760 463 KALVLEYMPHGSLEKYLHSSN----YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFG 537 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-~~~~kl~Dfg 537 (678)
.++||||+++ +|.+++.... ..+++..+..++.||+.||.||| +++++||||+|+||+++. ++.+|++|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999986 8988886532 34789999999999999999999 999999999999999998 8999999999
Q ss_pred cccccCCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc-CC-
Q 005760 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL-PI- 614 (678)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~-~~- 614 (678)
++........ ......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||.......... ....... +.
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLL-HIFKLLGTPTE 233 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHHHhCCCCh
Confidence 9876532211 1223356788999998765 457899999999999999999999987533221111 1111000 00
Q ss_pred -cccccc-------cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 615 -STKEIV-------DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 615 -~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...... .+.. ...... ......+.++.+++.+||++||.+||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQW-KPQDLS-RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhCcchhhccchhhcCcc-cchhHH-HhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 0000 000000 011235677999999999999999999999875
No 318
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.5e-34 Score=294.80 Aligned_cols=246 Identities=28% Similarity=0.378 Sum_probs=196.6
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
.|...+.||+|+||.||+|.. .++..||+|.+..... +....+..|+++++.++|||++++++++.+++..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 477788999999999999985 4789999999864322 234568889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
|+++ ++.+.+......+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++.....
T Consensus 106 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 106 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 9965 888888665666899999999999999999999 99999999999999999999999999999865432
Q ss_pred ceeecccCCccccCccccC---CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 549 TIQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
.....++..|+|||.+. .+.++.++|||||||++|||++|+.||....... ....+..... +..
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~---------~~~- 244 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNES---------PTL- 244 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhccC---------CCC-
Confidence 12345788999999873 4568899999999999999999999986532111 1111111100 000
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
....++..+.+++.+||+.+|.+||++.|+++..
T Consensus 245 --------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 245 --------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred --------CCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 0112345688999999999999999999999754
No 319
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.9e-34 Score=294.07 Aligned_cols=263 Identities=21% Similarity=0.266 Sum_probs=193.8
Q ss_pred CCccccCCCceeEEEEEeCCCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 396 ENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 396 ~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+++.+|.|+++.||++.. +++.||+|++... .....+.+..|+++++.++||||+++++++.+.+..+++|||++++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 344455555555555544 7899999998754 2345567899999999999999999999999999999999999999
Q ss_pred CHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC-----
Q 005760 474 SLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ----- 547 (678)
Q Consensus 474 ~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~----- 547 (678)
+|.+++... ...+++..+..++.|++.||+||| +++|+||||+|+||+++.++.+|++|||.+........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 999999754 335788899999999999999999 99999999999999999999999999999865532221
Q ss_pred cceeecccCCccccCccccCCC--CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCC---------c-
Q 005760 548 STIQTQTLATIGYMAPEYGKEG--RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI---------S- 615 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---------~- 615 (678)
........++..|+|||++... .++.++||||+||++|||++|+.||............ .....+. .
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-VRGTVPCLLDKSTYPLYE 240 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccCccccccCchhhhc
Confidence 1112334567789999988663 5788999999999999999999999754332211111 1100000 0
Q ss_pred --ccc----cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 616 --TKE----IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 616 --~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
... ..++... ...........+.++.+++.+||++||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 241 DSMSQSRSSNEHPNNR--DSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred CCcCcccccccccchh--hhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 0111100 11111122345677999999999999999999999986
No 320
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.1e-34 Score=294.96 Aligned_cols=272 Identities=22% Similarity=0.320 Sum_probs=195.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCC-----
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEE----- 461 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 461 (678)
..++|++.+.||+|+||.||+|... +++.||+|.+..... .....+.+|+++++.++||||+++++++...+
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3467999999999999999999854 789999999864422 22334567999999999999999999886543
Q ss_pred ---eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecc
Q 005760 462 ---FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 538 (678)
Q Consensus 462 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~ 538 (678)
..++||||+.+ ++.+++......+++..+..++.|+++|++||| +++++|+||+|+||+++.++.+||+|||+
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 45999999964 888888776556899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCc--ceeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCCcc--chhhhhhcccC
Q 005760 539 AKLLTREDQS--TIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEM--TLKHWVNDWLP 613 (678)
Q Consensus 539 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~--~~~~~~~~~~~ 613 (678)
+......... .......++..|+|||.+.+.. ++.++||||+|+++|||++|..||........ .+........+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 9765432211 1123345788899999876654 68899999999999999999999865322110 00000000000
Q ss_pred Cccccc---------ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 614 ISTKEI---------VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 614 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...... ..+...................+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000000 0000000000000000112345789999999999999999999975
No 321
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.2e-35 Score=319.11 Aligned_cols=255 Identities=24% Similarity=0.396 Sum_probs=190.8
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeee----------
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISS---------- 456 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~---------- 456 (678)
+-..+|+..+.||+||||.||+++.+ ||+.+|||++.... ......+.+|+..+++|+|||||+++..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34567888899999999999999977 99999999997653 3345678899999999999999999821
Q ss_pred ------------------------------------------------e--e----------------------------
Q 005760 457 ------------------------------------------------C--S---------------------------- 458 (678)
Q Consensus 457 ------------------------------------------------~--~---------------------------- 458 (678)
. .
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0 0
Q ss_pred ------------------------c-------CCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 005760 459 ------------------------N-------EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHF 507 (678)
Q Consensus 459 ------------------------~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~ 507 (678)
+ +..+||=||||+...+.++++++...-.....++++++|++||+|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH- 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH- 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH-
Confidence 0 02357889999998888888776543256778999999999999999
Q ss_pred CCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC----C------------CCCcceeecccCCccccCccccCCCC-
Q 005760 508 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT----R------------EDQSTIQTQTLATIGYMAPEYGKEGR- 570 (678)
Q Consensus 508 ~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~----~------------~~~~~~~~~~~~~~~y~aPE~~~~~~- 570 (678)
++|+|||||||.||++|+++.|||+|||+|+... . .......+..+||.-|+|||++.+..
T Consensus 715 --~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 715 --DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred --hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 9999999999999999999999999999998721 0 01122456788999999999887654
Q ss_pred --CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhh
Q 005760 571 --VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAME 648 (678)
Q Consensus 571 --~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 648 (678)
|+.|+|+||+||+++||+ .||....+. ...+.... ++.+..+ .++. .+..+.-..++.+
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~---yPF~TsMER----a~iL~~LR--------~g~iP~~--~~f~--~~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEML---YPFGTSMER----ASILTNLR--------KGSIPEP--ADFF--DPEHPEEASLIRW 853 (1351)
T ss_pred ccccchhhhHHHHHHHHHHh---ccCCchHHH----HHHHHhcc--------cCCCCCC--cccc--cccchHHHHHHHH
Confidence 999999999999999999 456542221 22221111 1111110 0000 0112234579999
Q ss_pred ccccCcCCCCCHHHHHH
Q 005760 649 CTVESPEQRINAKEIVT 665 (678)
Q Consensus 649 cl~~dP~~Rps~~ell~ 665 (678)
|++.||.+||||.|+++
T Consensus 854 Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLN 870 (1351)
T ss_pred HhcCCCccCCCHHHHhh
Confidence 99999999999999985
No 322
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.5e-34 Score=286.19 Aligned_cols=242 Identities=26% Similarity=0.324 Sum_probs=194.4
Q ss_pred ccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 400 IGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 400 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
||.|++|.||+|... +++.+|+|++.... ....+.+..|+++++.++||||+++++.+.+++..++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999864 58999999986532 23446788999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeeccc
Q 005760 476 EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555 (678)
Q Consensus 476 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 555 (678)
.+++.+.. .++...+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||.+....... ......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~ 153 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFC 153 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccccc
Confidence 99998764 3788999999999999999999 9999999999999999999999999999997664322 123346
Q ss_pred CCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHH
Q 005760 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK 635 (678)
Q Consensus 556 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (678)
++..|+|||.+.+..++.++|+||+|+++|+|++|..||.............+.. . ... ...+
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~--------~~~-------~~~~ 216 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK--G--------NGK-------LEFP 216 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc--c--------CCC-------CCCC
Confidence 7889999999888889999999999999999999999997644211111111000 0 000 0001
Q ss_pred HHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 005760 636 EQCVSFVFNVAMECTVESPEQRIN-----AKEIVT 665 (678)
Q Consensus 636 ~~~~~~l~~l~~~cl~~dP~~Rps-----~~ell~ 665 (678)
...+.++.+++.+||+.+|++||+ +.|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 112456889999999999999999 777765
No 323
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.2e-33 Score=294.24 Aligned_cols=273 Identities=21% Similarity=0.341 Sum_probs=196.8
Q ss_pred ccccCC--CceeEEEEEe-CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRG--SFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G--~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
..||.| +||+||+|.. .+|+.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 9999999985 4899999999865422 2346788899999999999999999999999999999999999
Q ss_pred CCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc--
Q 005760 473 GSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST-- 549 (678)
Q Consensus 473 ~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-- 549 (678)
+++.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99999987643 34788889999999999999999 9999999999999999999999999998654332111110
Q ss_pred ---eeecccCCccccCccccCCC--CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhc-c-------cCCcc
Q 005760 550 ---IQTQTLATIGYMAPEYGKEG--RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVND-W-------LPIST 616 (678)
Q Consensus 550 ---~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~-------~~~~~ 616 (678)
......++..|+|||++.+. .++.++||||+||++|||++|+.||................ + .+...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 01112345679999998764 47899999999999999999999997643321111100000 0 00000
Q ss_pred cccc---------------cCc---cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH--HHHHHHHH
Q 005760 617 KEIV---------------DPN---LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT--KLLKIRDS 673 (678)
Q Consensus 617 ~~~~---------------~~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~--~L~~~~~~ 673 (678)
.... .+. ..............++.++.+++.+||+.||++|||+.|+++ .++.+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 0000 000 000011112223456788999999999999999999999974 44444443
No 324
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=7.3e-34 Score=292.67 Aligned_cols=270 Identities=26% Similarity=0.334 Sum_probs=199.2
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCC----
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEE---- 461 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 461 (678)
...++|++.+.||+|+||.||+|..+ +|+.||+|+++.... .....+.+|+++++.++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999864 689999999865432 23356678999999999999999999886654
Q ss_pred ------eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 462 ------FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 462 ------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
..++|+||+++ ++.+.+......+++..+..++.|++.||+||| +.+|+|+||+|+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999976 787777765556899999999999999999999 99999999999999999999999999
Q ss_pred eccccccCCCCCcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh---cc
Q 005760 536 FGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN---DW 611 (678)
Q Consensus 536 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~---~~ 611 (678)
||.+........ .......++..|+|||.+.+. .++.++||||+||++|||++|+.||...... ..+..... ..
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCC
Confidence 999976543221 112223457789999977653 5788999999999999999999998653211 11111111 00
Q ss_pred cCCcccccc--------cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 612 LPISTKEIV--------DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 612 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+.....+. ++........ .......+..+.+++.+||+.||++||++.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRL-REEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred Chhhcccccccccccccccccccccch-hhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000000 0000000000 0011124567899999999999999999999875
No 325
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-36 Score=327.06 Aligned_cols=253 Identities=27% Similarity=0.391 Sum_probs=203.0
Q ss_pred hhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
.+-++.....||.|.||.||-|. ..+|.-.|+|-++.+. ....+.+.+|..++..++|||+|+++|+-...+..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 34467788899999999999997 5689999999886553 34557788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
||||.+|+|.+.+...+ ..++.....+..|++.|++||| +.|||||||||+||+++.+|.+|++|||.|..+.+..
T Consensus 1313 MEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 99999999999998665 3566666778899999999999 9999999999999999999999999999998776542
Q ss_pred C--cceeecccCCccccCccccCCCC---CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 547 Q--STIQTQTLATIGYMAPEYGKEGR---VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 547 ~--~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
. ........||+.|||||++.+.. ...++||||+||+..||+||+.||...+..-.-..+......|
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~P-------- 1460 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKP-------- 1460 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCC--------
Confidence 1 12234568999999999987643 5678999999999999999999997644321111111111110
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..|+..+++-.+++.+|++.||++|+++.|+++
T Consensus 1461 -----------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1461 -----------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred -----------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 011224556778999999999999999998875
No 326
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=9.1e-34 Score=289.88 Aligned_cols=244 Identities=25% Similarity=0.315 Sum_probs=196.1
Q ss_pred CccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 397 NNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
...||+|+||.||+|.. .+++.||+|++..........+.+|+.+++.++|+|++++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 36799999999999976 47899999998655445566788999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeeccc
Q 005760 476 EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555 (678)
Q Consensus 476 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 555 (678)
.+++... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++....... .......
T Consensus 105 ~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~ 177 (292)
T cd06657 105 TDIVTHT--RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLV 177 (292)
T ss_pred HHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc--ccccccc
Confidence 9988654 3788899999999999999999 8999999999999999999999999999986553221 1123346
Q ss_pred CCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHH
Q 005760 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK 635 (678)
Q Consensus 556 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (678)
++..|+|||...+..++.++|+||+|+++|+|++|..||...... ..........+.. ... .
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~~~~~~~--------~~~--------~ 239 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPK--------LKN--------L 239 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhCCcc--------cCC--------c
Confidence 788999999988888899999999999999999999998642211 1111111111100 000 0
Q ss_pred HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 636 EQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 636 ~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+.++.+++.+||+.+|.+||++.|+++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 123445789999999999999999999987
No 327
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.1e-33 Score=283.93 Aligned_cols=248 Identities=27% Similarity=0.388 Sum_probs=202.9
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|.+.+.||.|+||.||++... +++.+|+|++..... .....+.+|+++++.++|||++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999854 689999999875433 4556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 470 MPHGSLEKYLHSSN---YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 470 ~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
+++++|.+++.... ..+++..+..++.+++.|++||| +.+++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998753 56899999999999999999999 8999999999999999999999999999997654332
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
.......+++.|+|||...+..++.++|+||+|+++|+|++|+.||....... ............ .
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~-----~-- 223 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-----LALKILKGQYPP-----I-- 223 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-----HHHHHhcCCCCC-----C--
Confidence 22334568889999999988889999999999999999999999986532211 111100000000 0
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+..++.++.+++.+||..+|++||++.|+++
T Consensus 224 --------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 --------PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0123456889999999999999999999975
No 328
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.7e-35 Score=275.49 Aligned_cols=271 Identities=22% Similarity=0.302 Sum_probs=198.7
Q ss_pred hcCCCCCccccCCCceeEEEEEeC---CC--cEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeec-CCe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG---DG--MEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSN-EEF 462 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~---~~--~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~ 462 (678)
-..|+....||+|.||.||+|.-+ +. ..+|+|.++.++. .......+|+..++.++|||++.+..++.+ +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 346888999999999999999532 32 3789999965432 344567889999999999999999998877 778
Q ss_pred EEEEEEecCCCCHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC----CcEEEE
Q 005760 463 KALVLEYMPHGSLEKYLHSSN----YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN----MVAHLS 534 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~----~~~kl~ 534 (678)
.++++||.+. +|...++-.+ ..++...+..|..||+.|+.||| ++=|+|||+||.|||+..+ |.|||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEee
Confidence 8999999988 9999886332 36888999999999999999999 8889999999999999866 999999
Q ss_pred eeccccccCCCCCc-ceeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCC-----ccchhhh
Q 005760 535 DFGIAKLLTREDQS-TIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNG-----EMTLKHW 607 (678)
Q Consensus 535 Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~-----~~~~~~~ 607 (678)
|||+++.+.+.-.. ......+.|.+|.|||.+.+.. |+.+.||||+||++.||++-++-|.+.... .....+.
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99999988655332 2455678899999999888764 899999999999999999988877542211 0111111
Q ss_pred --hhcccCCc-ccccccCccCCcc-------------chhhH---HH-HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 608 --VNDWLPIS-TKEIVDPNLLSRE-------------DINFV---AK-EQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 608 --~~~~~~~~-~~~~~~~~~~~~~-------------~~~~~---~~-~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+-.....+ ...+.+-...... ...+. .. ...++..++|+.+++++||.+|.|++++++
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 10111100 1111110001000 00000 00 112344889999999999999999999876
No 329
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.3e-33 Score=286.95 Aligned_cols=242 Identities=22% Similarity=0.290 Sum_probs=186.4
Q ss_pred cccCCCceeEEEEEe-CCCcEEEEEEeecccC---chhhhHHHHHHHHHh---CCCccceeeeeeeecCCeEEEEEEecC
Q 005760 399 LIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG---RVFKSFDVECEMMKS---IRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 399 ~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~---l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
.||+|+||.||+|.. .+++.+|+|.+..... .....+.+|..+++. .+||+++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999985 4689999999864321 112233445444443 479999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++.... .+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++++|||++....... .
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~ 152 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----c
Confidence 999999987654 4899999999999999999999 9999999999999999999999999999986543221 2
Q ss_pred ecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 552 TQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
....++..|+|||...+ ..++.++||||+||++|||++|..||.......... ...... .....
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~---~~~~~~-----~~~~~------- 217 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---IDRMTL-----TVNVE------- 217 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH---HHHHhh-----cCCcC-------
Confidence 23468999999998764 457899999999999999999999997533221111 100000 00000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK 666 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~~ 666 (678)
.+..++.++.+++.+||+.||++|| +++|+++.
T Consensus 218 ---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 ---LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ---CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 0123456688999999999999999 69988773
No 330
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=300.41 Aligned_cols=277 Identities=25% Similarity=0.336 Sum_probs=203.7
Q ss_pred CCCCccccCCCceeEEEEE-eCCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCCCccceeeeeeeecC------CeEEE
Q 005760 394 FSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE------EFKAL 465 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~l 465 (678)
+...+.||+|+||.||+|+ ..+|+.||||.+.... ....+...+|++++++++|||||+++++-.+. +...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 4456789999999999999 4589999999997543 34567788999999999999999999886543 35679
Q ss_pred EEEecCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec--CCC--cEEEEeeccc
Q 005760 466 VLEYMPHGSLEKYLHSSN--YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD--DNM--VAHLSDFGIA 539 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~--~~~--~~kl~Dfg~~ 539 (678)
|||||.+|||...+.+.. ..+++.+...+...++.||.||| .++|+||||||.||++- .+| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999999997543 36999999999999999999999 99999999999999983 333 4699999999
Q ss_pred cccCCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh--cccCCcc
Q 005760 540 KLLTREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN--DWLPIST 616 (678)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~--~~~~~~~ 616 (678)
+..... ......+||..|++||.... +.|+..+|.|||||++|+++||..||-............+. ...+...
T Consensus 172 rel~d~---s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v 248 (732)
T KOG4250|consen 172 RELDDN---SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGV 248 (732)
T ss_pred ccCCCC---CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCce
Confidence 977533 25678899999999999884 78999999999999999999999999754333211100111 0011111
Q ss_pred cccccCccCCc--cchhhHHH----HHHHHHHHHHHhhccccCcCCCC--CHHHHHHHHHHHHHHHhh
Q 005760 617 KEIVDPNLLSR--EDINFVAK----EQCVSFVFNVAMECTVESPEQRI--NAKEIVTKLLKIRDSLLR 676 (678)
Q Consensus 617 ~~~~~~~~~~~--~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~Rp--s~~ell~~L~~~~~~~~~ 676 (678)
.-..++..-++ ....++.+ ......+-..+..+|..+|.+|. .+.+.-..+..|......
T Consensus 249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vv 316 (732)
T KOG4250|consen 249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVV 316 (732)
T ss_pred eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhhee
Confidence 10001000000 00000000 12223355677889999999999 888888888777665443
No 331
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.5e-33 Score=287.40 Aligned_cols=263 Identities=24% Similarity=0.311 Sum_probs=201.6
Q ss_pred CCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
|+..+.||+|++|.||+|... +++.+++|.+..... .....+..|+++++.++|+||+++++++.+++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999854 789999999865432 24467788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 471 PHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 471 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
++ ++.+++......+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RP 154 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--cc
Confidence 75 898888776556899999999999999999999 9999999999999999999999999999997664332 12
Q ss_pred eecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc---CCccccccc-----
Q 005760 551 QTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL---PISTKEIVD----- 621 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----- 621 (678)
.....++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+. ......... +.......+
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCchHhcccchhhhhhh
Confidence 2334578889999988776 688999999999999999999999865332111 000000000 000000000
Q ss_pred ----CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 ----PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 ----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+...... . .......+.++.+++.+||++||.+||++.|++.
T Consensus 234 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMP-L-PKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccC-H-HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000000 0 1112356788999999999999999999999985
No 332
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.8e-34 Score=299.10 Aligned_cols=268 Identities=22% Similarity=0.287 Sum_probs=196.7
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecc-cCchhhhHHHHHHHHHhCCCccceeeeeeeecC-----CeE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQ-YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNE-----EFK 463 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 463 (678)
.++|++.+.||+|+||.||+|.. .+|+.||+|++... .......+.+|+.+++.++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999974 47899999998643 223445678899999999999999999876543 357
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++|+||+++ ++.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 899999965 888888654 4889999999999999999999 9999999999999999999999999999987654
Q ss_pred CCCCc-ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCC----ccc
Q 005760 544 REDQS-TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPI----STK 617 (678)
Q Consensus 544 ~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~ 617 (678)
..... .......++..|+|||.+.+ ..++.++||||+||++|+|++|+.||.+.... ............ ...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHH
Confidence 32211 11233567899999998654 46889999999999999999999998653211 000001000100 000
Q ss_pred ccccCcc-------CCccchhhH-HHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 618 EIVDPNL-------LSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 618 ~~~~~~~-------~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.+.+... ......... .....+.++.+++.+||+.||++||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 000000000 011235678999999999999999999999874
No 333
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-35 Score=300.42 Aligned_cols=245 Identities=27% Similarity=0.432 Sum_probs=198.9
Q ss_pred CCCccccCCCceeEEEEEe-CCCcEEEEEEeec----ccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCe--EEEEE
Q 005760 395 SENNLIGRGSFGSVFKARL-GDGMEVAMKVFNL----QYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF--KALVL 467 (678)
Q Consensus 395 ~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~ 467 (678)
+....||+|+|-+||+|.+ .+|.+||=-.++. +.++..++|..|+++|+.|+||||+++|+++.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 4456899999999999975 3677775332221 234456889999999999999999999998877554 77999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec-CCCcEEEEeeccccccCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~-~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|.+..|+|..|+++.+. .+...++.|++||++||.|||+ ...+|+|||||-.||+++ ..|.|||+|+|+|+......
T Consensus 123 EL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred ecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 99999999999998875 8899999999999999999994 367899999999999997 67999999999999875332
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
.....|||.|||||... ..|.+.+||||||+.+.||+|+..||..=.....-++....+..|..+..+.||
T Consensus 201 ----aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dP---- 271 (632)
T KOG0584|consen 201 ----AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDP---- 271 (632)
T ss_pred ----cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCH----
Confidence 22378999999999876 789999999999999999999999986533332223333344555555555554
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
++.+||.+|+.. .++|||+.|+++
T Consensus 272 --------------evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 272 --------------EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred --------------HHHHHHHHHhcC-chhccCHHHHhh
Confidence 377899999999 999999999985
No 334
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-34 Score=313.30 Aligned_cols=270 Identities=18% Similarity=0.192 Sum_probs=189.1
Q ss_pred hcCCCCCccccCCCceeEEEEEeC--CCcEEEEEEe--------------ec---ccCchhhhHHHHHHHHHhCCCccce
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG--DGMEVAMKVF--------------NL---QYGRVFKSFDVECEMMKSIRHRNII 451 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~--------------~~---~~~~~~~~~~~e~~~l~~l~h~niv 451 (678)
.++|++.+.||+|+||.||++..+ .+..++.|.+ .. ........+.+|+++++.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999998643 2222222211 00 1112345678899999999999999
Q ss_pred eeeeeeecCCeEEEEEEecCCCCHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC
Q 005760 452 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSN----YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD 527 (678)
Q Consensus 452 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~ 527 (678)
++++++.+.+..|+|+|++. +++.+++.... .......+..++.|++.||.||| +++|+||||||+|||++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECC
Confidence 99999999999999999985 57887775432 12335667789999999999999 999999999999999999
Q ss_pred CCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCc--cchh
Q 005760 528 NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGE--MTLK 605 (678)
Q Consensus 528 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~--~~~~ 605 (678)
++.+||+|||++..+.... ........||..|+|||++.+..++.++|||||||++|||++|..++....... ..+.
T Consensus 303 ~~~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKER-EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCEEEEeCCCceecCccc-ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 9999999999998664322 222234578999999999999999999999999999999999876433211111 1111
Q ss_pred hhhhcc------cCCc---ccccccCccCC---ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 606 HWVNDW------LPIS---TKEIVDPNLLS---REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 606 ~~~~~~------~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+.+... .+.. ....++..... ............+.++.+++.+|+++||.+|||+.|++.
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 111100 0000 00000000000 000111122234556788999999999999999999986
No 335
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=8.4e-34 Score=298.52 Aligned_cols=263 Identities=23% Similarity=0.290 Sum_probs=196.9
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC------
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE------ 460 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 460 (678)
..++|+..+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999985 478999999986432 23345677899999999999999999987543
Q ss_pred CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
...++||||+. ++|.+.+... ++...+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence 35799999995 4888887643 788889999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhc----------
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVND---------- 610 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~---------- 610 (678)
..... .......++..|+|||.+.+..++.++||||+||++|+|++|+.||....... ........
T Consensus 167 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 167 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-QWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred eCCCC---CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 65322 11233457889999999998899999999999999999999999986532110 00000000
Q ss_pred --------ccC-------CcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 611 --------WLP-------ISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 611 --------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+.. ....+........... . ......+.++.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDS-E-SHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCccc-c-cccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 0000000000000000 0 001134566889999999999999999999985
No 336
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8.9e-34 Score=284.75 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=198.5
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|...+.||+|+||.||+|..+ +|..+|+|.+.... ....+.+.+|+++++.++|+||+++++.+.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999864 68899999986542 12345778899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC-cEEEEeeccccccCCCCC
Q 005760 470 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 470 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~-~~kl~Dfg~~~~~~~~~~ 547 (678)
+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++ .+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99999999987643 24789999999999999999999 99999999999999999886 46999999987654322
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.......+++.|+|||...+..++.++|+||||+++|||++|+.||......+ ............. .
T Consensus 157 -~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~-~------ 223 (257)
T cd08225 157 -ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ-----LVLKICQGYFAPI-S------ 223 (257)
T ss_pred -ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----HHHHHhcccCCCC-C------
Confidence 11223458889999999988889999999999999999999999986432211 1111111000000 0
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...+.++.+++.+||+.+|++|||+.|+++
T Consensus 224 --------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 224 --------PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred --------CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 123345889999999999999999999986
No 337
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=7.1e-34 Score=297.26 Aligned_cols=268 Identities=26% Similarity=0.343 Sum_probs=198.4
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc--cCchhhhHHHHHHHHHhC-CCccceeeeeeeecC--CeE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSI-RHRNIIKVISSCSNE--EFK 463 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~ 463 (678)
..++|++.+.||+|+||.||+|... +++.+|+|++... .......+.+|+.+++.+ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4568899999999999999999864 6889999988532 223345677899999999 999999999988643 468
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++||||++ ++|.+++... .+++..+..++.|++.||+||| +++|+|+||+|+||+++.++.+||+|||++....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 99999997 5999998765 5788899999999999999999 9999999999999999999999999999997664
Q ss_pred CCCCc---ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCc----
Q 005760 544 REDQS---TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS---- 615 (678)
Q Consensus 544 ~~~~~---~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 615 (678)
..... .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+. ...... ..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~-~~~~~~~~~ 236 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIE-VIGPPSAED 236 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHH-HhCCCCHHH
Confidence 33221 12234468889999997754 4578899999999999999999999865332211 110000 00000
Q ss_pred --------ccccccCccCCccchhhH-HHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 616 --------TKEIVDPNLLSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 616 --------~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
...+.+. .......... ....++.++.+++.+||+.||++|||+.++++.
T Consensus 237 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 237 IESIKSPFAATMLDS-LPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhhhHHHhhhh-cccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000 0000000000 001256778999999999999999999999974
No 338
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.2e-33 Score=287.20 Aligned_cols=243 Identities=22% Similarity=0.266 Sum_probs=191.3
Q ss_pred ccCCCceeEEEEEe-CCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 400 IGRGSFGSVFKARL-GDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 400 ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
||+|+||+||+|.. .+|+.||+|.+.... ......+..|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999974 478999999986432 22334567899999999999999999999999999999999999999
Q ss_pred HHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecc
Q 005760 476 EKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQT 554 (678)
Q Consensus 476 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 554 (678)
.+++.... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||.+..... .......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGR 154 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc---CCccccc
Confidence 99997654 35889999999999999999999 99999999999999999999999999999875432 1122334
Q ss_pred cCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHH
Q 005760 555 LATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVA 634 (678)
Q Consensus 555 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (678)
.++..|+|||.+.++.++.++||||+||++|+|++|+.||....... ........... .+.. .
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-------~~~~---------~ 217 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTLE-------MAVE---------Y 217 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhcccc-------cccc---------C
Confidence 57889999999988889999999999999999999999986533211 11111000000 0000 0
Q ss_pred HHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 635 KEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 635 ~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
+...++++.+++.+||+.||++|| ++.+++.
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 218 PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 112355688999999999999999 6666654
No 339
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.1e-34 Score=297.29 Aligned_cols=268 Identities=23% Similarity=0.317 Sum_probs=198.7
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeec----CCeE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSN----EEFK 463 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 463 (678)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+..|+.+++.++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 47899999999999999999975 479999999986542 2334567789999999999999999988753 3568
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++|+||+. ++|.+++.... .+++..+..++.|++.||+||| +++++||||||+||++++++.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99999995 58999987654 3899999999999999999999 9999999999999999999999999999997654
Q ss_pred CCCCc--ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccc
Q 005760 544 REDQS--TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620 (678)
Q Consensus 544 ~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (678)
..... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.+..... ....+..........+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~--~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH--QLKLILSVLGSPSEEVL 236 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH--HHHHHHHHhCCChhHhh
Confidence 32211 11234468889999998765 458899999999999999999999996532211 00111100000000000
Q ss_pred cC-----------ccCCccchhh-HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 621 DP-----------NLLSREDINF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 621 ~~-----------~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+. .......... ......+.++.+++.+||+.+|++||++.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00 0000000000 001234677999999999999999999999886
No 340
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=6.3e-34 Score=291.01 Aligned_cols=253 Identities=26% Similarity=0.305 Sum_probs=192.1
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|...+.||+|+||.||++.. .+++.||+|.+.... ......+..|+.++.++. ||||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 455678899999999999975 478999999986543 234567788999999996 99999999999988899999999
Q ss_pred cCCCCHHHHh---hh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 470 MPHGSLEKYL---HS-SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 470 ~~~~~L~~~l---~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
++. ++.++. .. ....+++..+..++.|++.|++|||+ ..+++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 555443 22 22458899999999999999999992 359999999999999999999999999998755322
Q ss_pred CCcceeecccCCccccCccccCCC---CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 546 DQSTIQTQTLATIGYMAPEYGKEG---RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 546 ~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
. ......++..|+|||.+.+. .++.++||||+||++|||++|+.||................. .+
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---------~~ 229 (288)
T cd06616 162 I---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGD---------PP 229 (288)
T ss_pred C---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCC---------CC
Confidence 1 11233578899999998776 688999999999999999999999865321101111110000 01
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
..... .+..++.++.+++.+||+.+|++|||+.|+++.
T Consensus 230 ~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 ILSNS------EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCCc------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11000 002345668999999999999999999999874
No 341
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8e-36 Score=302.04 Aligned_cols=306 Identities=21% Similarity=0.242 Sum_probs=263.7
Q ss_pred CccccCCcCcccCC-ccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEE
Q 005760 1 MLQMWENNFSGTIP-RFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLI 79 (678)
Q Consensus 1 ~L~l~~~~~~~~~p-~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L 79 (678)
.||||+|.|+ .+| .+|..-.++++|+|++|.|+....++|..+.+|.+|.|+.|+++.+|.. .|.++++|+.|
T Consensus 153 slDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r-----~Fk~L~~L~~L 226 (873)
T KOG4194|consen 153 SLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQR-----SFKRLPKLESL 226 (873)
T ss_pred hhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHH-----Hhhhcchhhhh
Confidence 3789999998 555 6777778999999999999988889999999999999999999998875 58889999999
Q ss_pred ECccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCc
Q 005760 80 SFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNK 159 (678)
Q Consensus 80 ~L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 159 (678)
+|..|+|... .+..|..++ +|+.|.|..|.+.......|..+.++++|+|+.|+++..-.+.+.+|++|+.|+|+.|.
T Consensus 227 dLnrN~iriv-e~ltFqgL~-Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~Na 304 (873)
T KOG4194|consen 227 DLNRNRIRIV-EGLTFQGLP-SLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNA 304 (873)
T ss_pred hccccceeee-hhhhhcCch-hhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhh
Confidence 9999999643 344477787 89999999999998888889999999999999999987777888899999999999999
Q ss_pred CCCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccc-cccccccccEEEecCCcccCCCCcc
Q 005760 160 LEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPL-TFWNLKDILYLNFSSNFFTGPLPLE 238 (678)
Q Consensus 160 i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~-~~~~l~~L~~L~l~~N~l~~~~~~~ 238 (678)
|...-++.+...++|+.|+|++|+|+...+.+|..+.+|++|.|++|.|+.+.+ +|..+++|+.|||++|.|...+...
T Consensus 305 I~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDa 384 (873)
T KOG4194|consen 305 IQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDA 384 (873)
T ss_pred hheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecc
Confidence 988888899999999999999999998888899999999999999999999877 6889999999999999887544322
Q ss_pred ccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCCCccccccccccccCccccCCCC
Q 005760 239 IGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPN 318 (678)
Q Consensus 239 ~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~l~~~~~~~n~~~c~~~~ 318 (678)
...+..+++|+.|+|.+|+|..+...+|.+++.|+.|||.+|.+.+.-+....-..|+.+.+....+.|||..
T Consensus 385 -------a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql 457 (873)
T KOG4194|consen 385 -------AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQL 457 (873)
T ss_pred -------hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccH
Confidence 1233456699999999999998888999999999999999999987766653334889999999999999998
Q ss_pred CCC
Q 005760 319 LRV 321 (678)
Q Consensus 319 ~~~ 321 (678)
.|+
T Consensus 458 ~Wl 460 (873)
T KOG4194|consen 458 KWL 460 (873)
T ss_pred HHH
Confidence 776
No 342
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.2e-33 Score=289.92 Aligned_cols=264 Identities=24% Similarity=0.301 Sum_probs=195.2
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++|++.+.||+|++|.||+|..+ +++.||+|.+.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 47888999999999999999864 78999999985432 2234567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-CCcEEEEeeccccccCCCC
Q 005760 469 YMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-~~~~kl~Dfg~~~~~~~~~ 546 (678)
|++ +++.+++..... ..++..+..++.||+.||+||| +++++|+||+|+||+++. ++.+|++|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 588887755432 3578888899999999999999 899999999999999985 5679999999997543221
Q ss_pred CcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccc------
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI------ 619 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 619 (678)
.......+++.|+|||.+.+. .++.++||||+||++|+|++|+.||......+.. ..... .........
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 158 --RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL-FKIFR-ILGTPNEETWPGVTS 233 (294)
T ss_pred --cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHH-HhCCCChhhcccccc
Confidence 112234567899999987664 5788999999999999999999998753322111 11100 000000000
Q ss_pred -cc-----CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 -VD-----PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 -~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+ +.... . .........++++.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 234 LPDYKSAFPKWPP-K-DLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred chhhhhhcccCCC-C-CHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 00000 0 000011234566889999999999999999999986
No 343
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-33 Score=283.21 Aligned_cols=247 Identities=28% Similarity=0.407 Sum_probs=201.5
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|++.+.||+|++|.||+|... +++.|++|.+..... ...+.+.+|++++++++|||++++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999754 688999999976543 3556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++++|.+++.... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 81 AENGSLRQIIKKFG-PFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred CCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 99999999997663 5899999999999999999999 999999999999999999999999999999876533221
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
.....++..|+|||...+..++.++||||+|+++|+|++|..||...... ........ .. .+..
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~~~~-~~-----~~~~----- 219 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFRIVQ-DD-----HPPL----- 219 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHhc-cC-----CCCC-----
Confidence 23346788999999988888899999999999999999999998653211 11110000 00 0000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+...+..+.+++.+||+.+|++||++.|++.
T Consensus 220 -----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 -----PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -----CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0123455889999999999999999999874
No 344
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-35 Score=268.90 Aligned_cols=249 Identities=23% Similarity=0.286 Sum_probs=195.2
Q ss_pred CCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEec
Q 005760 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
...+..||.|..|.||+++. ++|..+|||.+.... .+.-+++...+.++..- .+|+||+.+|+|......++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 34467799999999999985 478999999996543 34456666666665544 4899999999999988888999998
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 471 PHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 471 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
. ..+..++++...++++..+-.+...+++||.||.+ +++|+|||+||+|||+|+.|++|+||||.+-.+..+..
T Consensus 174 s-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA--- 247 (391)
T KOG0983|consen 174 S-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--- 247 (391)
T ss_pred H-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccc---
Confidence 4 37777787777778888888899999999999997 88999999999999999999999999999977654333
Q ss_pred eecccCCccccCccccCCC---CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 551 QTQTLATIGYMAPEYGKEG---RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.+...|-+.|||||.+... .|+.++||||||+.++|+.||+.||..-...-..+....+..+ |.+..
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP---------P~L~~- 317 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP---------PLLPG- 317 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC---------CCCCc-
Confidence 3456688999999987643 6889999999999999999999999763222222222111111 11111
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....++++.+++..||++|+.+||...++++
T Consensus 318 -------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 318 -------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred -------ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1225677999999999999999999999875
No 345
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.5e-33 Score=289.37 Aligned_cols=252 Identities=23% Similarity=0.289 Sum_probs=194.5
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-CchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-GRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 467 (678)
.++|++.+.||+|+||.||+|..+ +++.||||.++... ......+..|+.++.... ||||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 467888999999999999999875 48999999986532 223345666777666664 999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
||++ +++.+++......+++..+..++.|++.|++||| + .+|+||||+|+||+++.++.+||+|||++.......
T Consensus 94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 9985 4788877665556899999999999999999999 6 599999999999999999999999999987653322
Q ss_pred CcceeecccCCccccCccccCCCC----CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGR----VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
. .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.........+........ ..+...
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~ 242 (296)
T cd06618 170 A---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP----PSLPPN 242 (296)
T ss_pred c---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC----CCCCCC
Confidence 1 22335778899999887553 788999999999999999999998642221111111111100 000000
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
..++.++.+++.+||+.||++||++.++++.
T Consensus 243 -------------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 243 -------------EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -------------CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0234568899999999999999999999765
No 346
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.2e-34 Score=287.10 Aligned_cols=245 Identities=27% Similarity=0.349 Sum_probs=194.2
Q ss_pred ccCCCceeEEEEEeC-CCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 400 IGRGSFGSVFKARLG-DGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 400 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
||.|+||.||+|... +|+.+++|++..... ...+.+.+|+++++.++||||+++++.+...+..++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999865 599999999865432 3456788899999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC------cc
Q 005760 476 EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ------ST 549 (678)
Q Consensus 476 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~ 549 (678)
.+++.+.. .+++..+..++.|+++||+||| +.+++|+||+|+||++++++.++++|||++........ ..
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99998765 5899999999999999999999 99999999999999999999999999999875432211 11
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
......++..|+|||...+...+.++||||||+++|++++|+.||......+ ....... ... ..+
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~~~~~~~---~~~---~~~------- 221 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE--IFQNILN---GKI---EWP------- 221 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhc---CCc---CCC-------
Confidence 2334567889999999988889999999999999999999999986533211 1111100 000 000
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
.....+..+.+++.+||+.+|++||++.++.+.|
T Consensus 222 ----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 222 ----EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred ----ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 0001256688999999999999999995554443
No 347
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-33 Score=283.73 Aligned_cols=246 Identities=26% Similarity=0.366 Sum_probs=200.6
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|++.+.||+|+||.||++.. .+++.+|+|.+.... ......+.+|+++++.++||||+++.+++.+.+..++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 478889999999999999974 478899999986532 23345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 470 MPHGSLEKYLHSS---NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 470 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
+++++|.+++.+. ...+++..++.++.|++.|++||| +.+++|+||+|+||+++.++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998662 235788999999999999999999 999999999999999999999999999999776433
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
......++..|+|||.+.+..++.++|+||+|+++|||++|+.||...... .....+.. .. ..
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~---~~---------~~ 219 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQR---GK---------YP 219 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc---CC---------CC
Confidence 222345788999999998888999999999999999999999998653321 11111110 00 00
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+..++.++.+++.+|++.+|++||++.|+++
T Consensus 220 ~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 P------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred C------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 01134566899999999999999999999975
No 348
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.3e-33 Score=284.22 Aligned_cols=241 Identities=22% Similarity=0.299 Sum_probs=185.9
Q ss_pred ccccCCCceeEEEEEe-CCCcEEEEEEeecccC---chhhhHHHHHHHH-HhCCCccceeeeeeeecCCeEEEEEEecCC
Q 005760 398 NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG---RVFKSFDVECEMM-KSIRHRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+.||+|+||.||+|.. .+++.||+|++..... .....+..|..++ ...+|+|++++++++.+.+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999975 4689999999864321 1122334454443 455899999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
++|.+++.... .++...+..++.|++.||.||| +.+++|+||+|+||+++.++.++++|||++..... ..
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~ 151 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NK 151 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cc
Confidence 99999997654 4788999999999999999999 89999999999999999999999999999865432 22
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...++..|+|||...+..++.++||||+|+++|||++|..||....... ........ .. ..+.
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~----~~---~~~~--------- 214 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFDNILSR----RI---NWPE--------- 214 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhc----cc---CCCC---------
Confidence 3457889999999988888999999999999999999999986532211 01100000 00 0000
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.....++.++.+++.+||+.+|++||++.++.+
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 001134567899999999999999997754433
No 349
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.8e-33 Score=281.36 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=196.3
Q ss_pred cCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc-----CchhhhHHHHHHHHHhCCCccceeeeeeeecC--CeE
Q 005760 392 DGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY-----GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE--EFK 463 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 463 (678)
.+|++.+.||+|+||.||+|.. .++..||+|.+.... .+....+.+|+++++.++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4788999999999999999985 478999999875321 23345788899999999999999999998654 468
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++|+||+++++|.+++..... +++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 899999999999999976543 788889999999999999999 9999999999999999999999999999997653
Q ss_pred CCCC-cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccC
Q 005760 544 REDQ-STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 544 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.... ........++..|+|||.+.+..++.++|+|||||++|+|++|+.||....... ...+.. ..... +
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~----~~~~~----~ 228 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AIFKIA----TQPTK----P 228 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HHHHHH----cCCCC----C
Confidence 2111 111223458889999999988889999999999999999999999986532211 111110 00000 0
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+...++++.+++.+||+ +|..||++.+++.
T Consensus 229 ~----------~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 229 M----------LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred C----------CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0 011234568899999999 5799999998875
No 350
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.7e-33 Score=285.12 Aligned_cols=264 Identities=24% Similarity=0.326 Sum_probs=195.3
Q ss_pred CCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhC---CCccceeeeeeeecCCe-----
Q 005760 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSI---RHRNIIKVISSCSNEEF----- 462 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~----- 462 (678)
|++.+.||+|+||.||+|..+ +++.||+|++..... .....+..|+.+++.+ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999875 589999999964322 2234566787777666 59999999999987776
Q ss_pred EEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
.+++|||+++ +|.+++.... ..+++..+..++.|++.||.||| +.+++|+|++|+||+++.++.+||+|||.+..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 8999999975 8999887643 35899999999999999999999 99999999999999999999999999999977
Q ss_pred cCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
...... .....++..|+|||.+.+..++.++|+||+||++|||++|..||......+ ....+...........+..
T Consensus 157 ~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHcCCCChHhcCC
Confidence 643221 123347888999999998889999999999999999999999987533221 1111111100000000000
Q ss_pred -----CccCCccc-hh-hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 -----PNLLSRED-IN-FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 -----~~~~~~~~-~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
........ .. .......+..+.+++.+||+.||++||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000 00 0011234567889999999999999999999875
No 351
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.5e-33 Score=335.29 Aligned_cols=301 Identities=34% Similarity=0.557 Sum_probs=247.6
Q ss_pred CccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEE
Q 005760 1 MLQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLIS 80 (678)
Q Consensus 1 ~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~ 80 (678)
.|+|++|++.+.+|..+.++++|++|+|++|.+.+..|..|.++++|+.|++++|.+....+ ..+..+++|+.|+
T Consensus 264 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~-----~~~~~l~~L~~L~ 338 (968)
T PLN00113 264 YLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP-----VALTSLPRLQVLQ 338 (968)
T ss_pred EEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCC-----hhHhcCCCCCEEE
Confidence 37899999999999999999999999999999999999999999999999999999976443 3578999999999
Q ss_pred CccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcC
Q 005760 81 FSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKL 160 (678)
Q Consensus 81 L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i 160 (678)
|++|.+.+..|.. +..+. +|+.|++++|++.+..|..+..+++|+.|++++|++.+..|..+..+++|+.|+|++|.+
T Consensus 339 L~~n~l~~~~p~~-l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l 416 (968)
T PLN00113 339 LWSNKFSGEIPKN-LGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSF 416 (968)
T ss_pred CcCCCCcCcCChH-HhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEe
Confidence 9999999887765 66665 899999999999998898888888888888888888888888888888888888888888
Q ss_pred CCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceecccccccc------------------------cccccc
Q 005760 161 EGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTS------------------------IPLTFW 216 (678)
Q Consensus 161 ~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~------------------------l~~~~~ 216 (678)
++.+|..|..+++|+.|++++|.+.+..+..+..+++|+.|+|++|++.. +|..+.
T Consensus 417 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~ 496 (968)
T PLN00113 417 SGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLG 496 (968)
T ss_pred eeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhh
Confidence 87777778888888888888888877777666666666666666655442 233445
Q ss_pred ccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCC
Q 005760 217 NLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRG 296 (678)
Q Consensus 217 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 296 (678)
.+++|+.|+|++|.+.+..|..+.+++ +|+.|+|++|.+++..|..+..+++|+.|++++|++++..|..
T Consensus 497 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~----------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 566 (968)
T PLN00113 497 SLSELMQLKLSENKLSGEIPDELSSCK----------KLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKN 566 (968)
T ss_pred hhhccCEEECcCCcceeeCChHHcCcc----------CCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChh
Confidence 555555555555555555555555444 9999999999999999999999999999999999999877764
Q ss_pred -CccccccccccccCccccCCCC
Q 005760 297 -GSFGNFSAESFEGNELLCGSPN 318 (678)
Q Consensus 297 -~~~~~l~~~~~~~n~~~c~~~~ 318 (678)
..+..+..+++.+|++.+..|.
T Consensus 567 l~~l~~L~~l~ls~N~l~~~~p~ 589 (968)
T PLN00113 567 LGNVESLVQVNISHNHLHGSLPS 589 (968)
T ss_pred HhcCcccCEEeccCCcceeeCCC
Confidence 6677899999999998876663
No 352
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-33 Score=295.59 Aligned_cols=273 Identities=23% Similarity=0.264 Sum_probs=200.9
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeeeeeecC-----Ce
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNE-----EF 462 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 462 (678)
.++|.+.+.||+|+||+||+|.. .+++.||+|.+... .......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45789999999999999999975 47899999998643 223345677899999999999999999987543 35
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
.++|+||+. ++|.+++.... .+++..+..++.|++.|+.||| +++++||||+|+||+++.++.+||+|||++...
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 799999995 68998887654 4899999999999999999999 999999999999999999999999999999765
Q ss_pred CCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcc---cCCcccc
Q 005760 543 TREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW---LPISTKE 618 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~ 618 (678)
.... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||.+.... .......... .+.....
T Consensus 159 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 159 SEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred CCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhCCCChHHhhh
Confidence 4321 12234457889999998764 46889999999999999999999998653211 0010000000 0000000
Q ss_pred cccCccC-------Cccchh-hHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH--HHHHH
Q 005760 619 IVDPNLL-------SREDIN-FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK--LLKIR 671 (678)
Q Consensus 619 ~~~~~~~-------~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~--L~~~~ 671 (678)
+.++... ...... ......+++++.+++.+||+.+|++|||+.|+++. ++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 0000000 000000 01112456778999999999999999999999876 55443
No 353
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.6e-33 Score=289.11 Aligned_cols=246 Identities=28% Similarity=0.387 Sum_probs=194.9
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
..|+..+.||+|+||.||+|... ++..+|+|.+... ......++.+|+++++.++|+|++++.+++...+..++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34667789999999999999854 6888999998642 1223456778999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+. |++.+.+......+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 9996 5888887665556889999999999999999999 999999999999999999999999999998755321
Q ss_pred cceeecccCCccccCccccC---CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 548 STIQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
....++..|+|||.+. .+.++.++|||||||++|||++|+.||....... ....+..... +..
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~---------~~~ 234 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNES---------PAL 234 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhhcCC---------CCc
Confidence 2345788999999864 3567889999999999999999999986532111 1111111000 000
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
....++..+.+++.+||+.+|++||++.++++.
T Consensus 235 ---------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 235 ---------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred ---------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 011244558899999999999999999998865
No 354
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.6e-33 Score=293.94 Aligned_cols=272 Identities=26% Similarity=0.320 Sum_probs=204.5
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCC-----eEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE-----FKA 464 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 464 (678)
+|++.+.||.|++|.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++.+++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788999999999999999864 58999999986543 334567889999999999999999999987765 789
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+||||++ ++|.+++.... .+++..+..++.|++.|++||| +.+++|+||||.||+++.++.++++|||.+.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 9999997 48999887655 6899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCC-cceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc-c--
Q 005760 545 EDQ-STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE-I-- 619 (678)
Q Consensus 545 ~~~-~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 619 (678)
... ........++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+. ...... ........ +
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~-~~~~~~~~~~~~ 233 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLIVE-VLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHH-hcCCCChhHhhh
Confidence 321 0123345678899999998887 789999999999999999999999976432111 111000 00000000 0
Q ss_pred ccCcc--------CCccchhh-HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH--HHHHH
Q 005760 620 VDPNL--------LSREDINF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK--LLKIR 671 (678)
Q Consensus 620 ~~~~~--------~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~--L~~~~ 671 (678)
..... ........ ......+.++.+++.+||+++|++||++.+++.. ++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 00000 00000000 0011246778999999999999999999999974 55544
No 355
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.7e-33 Score=291.73 Aligned_cols=269 Identities=21% Similarity=0.236 Sum_probs=196.1
Q ss_pred hcCCCC-CccccCCCceeEEEEEeC-CCcEEEEEEeecccCch--------------hhhHHHHHHHHHhCCCccceeee
Q 005760 391 TDGFSE-NNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRV--------------FKSFDVECEMMKSIRHRNIIKVI 454 (678)
Q Consensus 391 ~~~~~~-~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~~~ 454 (678)
.++|.. .+.||.|+||.||+|..+ +++.||+|++....... ...+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 456654 577999999999999854 78999999986432211 12467899999999999999999
Q ss_pred eeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEE
Q 005760 455 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS 534 (678)
Q Consensus 455 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~ 534 (678)
+++...+..++||||+. ++|.+++.... .++...+..++.|++.|++||| +.+++|+||+|+||+++.++.++++
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEEC
Confidence 99999999999999996 59999987644 4889999999999999999999 9999999999999999999999999
Q ss_pred eeccccccCCCCC------------cceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCc
Q 005760 535 DFGIAKLLTREDQ------------STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGE 601 (678)
Q Consensus 535 Dfg~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~ 601 (678)
|||.+........ ........++..|+|||.+.+. .++.++||||+||++|||++|+.||......+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999976541110 1111233467889999988764 46889999999999999999999987543221
Q ss_pred cchhhhhhccc---CCcccccc-----cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 602 MTLKHWVNDWL---PISTKEIV-----DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 602 ~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.......... ...+.... .+...............++.++.+++.+||+.+|++||++.|++.
T Consensus 242 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 -QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred -HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1111110000 00000000 000000000000011234567889999999999999999999985
No 356
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-34 Score=269.42 Aligned_cols=259 Identities=21% Similarity=0.329 Sum_probs=200.8
Q ss_pred ccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 398 NLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
+.||+|+|+.|--+. ..+|.++|||++.++..+.+.++.+|++++...+ |+||+.++++|++++..|+|||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 689999999998875 6799999999999888889999999999999986 99999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC---CcEEEEeeccccccCC-----CCC
Q 005760 476 EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTR-----EDQ 547 (678)
Q Consensus 476 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~---~~~kl~Dfg~~~~~~~-----~~~ 547 (678)
..++++... +++..+.++.++|+.||.+|| ++||.|||+||+|||.... --||||||.+..-... ...
T Consensus 164 LshI~~~~~-F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas 239 (463)
T KOG0607|consen 164 LSHIQKRKH-FNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS 239 (463)
T ss_pred HHHHHHhhh-ccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence 999988765 888889999999999999999 9999999999999998643 3589999988643211 111
Q ss_pred cceeecccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcc-ccccc
Q 005760 548 STIQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST-KEIVD 621 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 621 (678)
...-...+|+..|||||+.. ...|+.+.|.||+||++|=|++|.+||.+.-..+-. |-+...=... ..++.
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG---WdrGe~Cr~CQ~~LFe 316 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG---WDRGEVCRVCQNKLFE 316 (463)
T ss_pred CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC---ccCCCccHHHHHHHHH
Confidence 22234567899999999642 234788999999999999999999999864332211 1110000000 00000
Q ss_pred CccCCccchhhH--HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 PNLLSREDINFV--AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 ~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. +...-++++ .+...+.+..+++...+..||.+|.++.+++.
T Consensus 317 s--IQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 317 S--IQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred H--HhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0 111112222 23457888999999999999999999998875
No 357
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8.1e-33 Score=285.94 Aligned_cols=244 Identities=27% Similarity=0.361 Sum_probs=193.5
Q ss_pred CCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 394 FSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
|...+.||+|+||.||+|+. .+++.|++|++..... .....+..|+++++.++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66678899999999999985 4789999999864322 2335678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+. +++.+++......+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 95 5888888766666899999999999999999999 99999999999999999999999999999864321
Q ss_pred eeecccCCccccCccccC---CCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 550 IQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
.....++..|+|||.+. .+.++.++|||||||++|||++|..||........ ....... .. +...
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~----~~-----~~~~- 241 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQN----DS-----PTLQ- 241 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhc----CC-----CCCC-
Confidence 12346788999999874 45688899999999999999999999865322111 1110000 00 0000
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
...++..+.+++.+||+++|.+||++.+++..
T Consensus 242 --------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 --------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01223457899999999999999999999863
No 358
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=9.1e-33 Score=280.67 Aligned_cols=241 Identities=22% Similarity=0.301 Sum_probs=185.9
Q ss_pred cccCCCceeEEEEEe-CCCcEEEEEEeecccC---chhhhHHHHHH---HHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 399 LIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG---RVFKSFDVECE---MMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 399 ~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
.||+|+||.||+|.. .+++.||+|.+..... .....+..|.. .++...||+|+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999975 4689999999865321 11122333433 3444579999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++.... .+++..+..++.|+++|++||| +.+++||||+|+||+++.++.++|+|||++....... .
T Consensus 81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~ 152 (278)
T cd05606 81 GGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (278)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----C
Confidence 999999887654 5899999999999999999999 8999999999999999999999999999987553221 2
Q ss_pred ecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccch
Q 005760 552 TQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 630 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (678)
....++..|+|||.+.++ .++.++||||+||++|||++|+.||.............. .. ..++..
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~--~~------~~~~~~------ 218 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM--TL------TMAVEL------ 218 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH--hh------ccCCCC------
Confidence 234688999999998754 588999999999999999999999976422211100000 00 000110
Q ss_pred hhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 631 NFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 631 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
+..++.++.+++.+|++.+|++|| ++.|+++
T Consensus 219 ----~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 ----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ----CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 012345688999999999999999 9999985
No 359
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-35 Score=270.42 Aligned_cols=271 Identities=20% Similarity=0.321 Sum_probs=201.4
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeec--ccCchhhhHHHHHHHHHhCCCccceeeeeeeec--------
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNL--QYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN-------- 459 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 459 (678)
.+.|....+||+|.||.||+|+. ++|+.||+|+.-. ....-.....+|+.++..++|+|++.+++.|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 44566778999999999999975 4678899987533 222333556789999999999999999887733
Q ss_pred CCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccc
Q 005760 460 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIA 539 (678)
Q Consensus 460 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~ 539 (678)
....|+|+++|+. +|..++......++..++..++.++++||.|+| +..|+|||+||+|++++.+|.+||+|||++
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 3468999999977 999999887777999999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCC--CcceeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCcc--chhhhhhcccCC
Q 005760 540 KLLTRED--QSTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEM--TLKHWVNDWLPI 614 (678)
Q Consensus 540 ~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~--~~~~~~~~~~~~ 614 (678)
+.+.... .....+..+.|.+|.+||.+.+. .|+++.|||+.||++.||++|.+-+.+..+... .+...+....++
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 6554322 23345677789999999977765 589999999999999999999988776443311 111122222222
Q ss_pred cccccccCccC--------CccchhhH----HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 615 STKEIVDPNLL--------SREDINFV----AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 615 ~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+.....-.+. .....+.. .+-...++..+++..++..||.+|+++++++.
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 22222111111 11100000 00111336889999999999999999988874
No 360
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.7e-33 Score=288.66 Aligned_cols=270 Identities=20% Similarity=0.274 Sum_probs=195.6
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecC-------
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNE------- 460 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 460 (678)
.++|++.+.||+|+||.||+|..+ +++.+|+|++..... .....+.+|+++++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999854 789999999864422 2234567899999999999999999877443
Q ss_pred -CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccc
Q 005760 461 -EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIA 539 (678)
Q Consensus 461 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~ 539 (678)
...++|+||+.+ ++.+.+......+++..+..++.|+++||+||| +.+++|+||+|+||++++++.++++|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 346899999965 788877765556999999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCcc---------eeecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh
Q 005760 540 KLLTREDQST---------IQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 540 ~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 609 (678)
.......... ......+++.|+|||.+.+. .++.++||||+||++|||++|+.||.+..... .......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QLHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 7654322111 11233567889999987654 57899999999999999999999986532211 0111110
Q ss_pred ccc---CCc------ccccccCccCCccchhhH-HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 610 DWL---PIS------TKEIVDPNLLSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 610 ~~~---~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
... +.. .....+............ ......+++.+++.+|++.||++|||+.|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000 000 000000000000000000 01123466889999999999999999999875
No 361
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6.4e-33 Score=282.82 Aligned_cols=263 Identities=21% Similarity=0.259 Sum_probs=195.2
Q ss_pred CCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccC-chhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEEEEec
Q 005760 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
|.+.+.||+|++|.||+|... +++.||+|.+..... .......+|+..++.++ |||++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999865 588999999864432 12233456889999999 999999999999999999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 471 PHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 471 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+++|.+++.... ..+++..+..++.|++.++.||| +++++|+||+|+||++++++.++|+|||.++......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 779999887654 45899999999999999999999 8999999999999999999999999999997654322
Q ss_pred eeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCc----------ccc
Q 005760 550 IQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIS----------TKE 618 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~ 618 (678)
......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||......+. ...... ..... ...
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYKICS-VLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-HHHHHH-hcCCCChhhhhhHhhhhc
Confidence 1233557889999997754 4578999999999999999999999865322111 000000 00000 000
Q ss_pred cccCccCCccchhh-HHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 619 IVDPNLLSREDINF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 619 ~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..+........... ......+.++.+++.+||+.+|++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00000000000000 000112467899999999999999999999975
No 362
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.8e-33 Score=286.14 Aligned_cols=254 Identities=22% Similarity=0.283 Sum_probs=197.3
Q ss_pred CCCCCccccCCCceeEEEEEe----CCCcEEEEEEeeccc----CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeE
Q 005760 393 GFSENNLIGRGSFGSVFKARL----GDGMEVAMKVFNLQY----GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFK 463 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 463 (678)
+|++.+.||+|++|.||+|.. .+++.||+|++.... ....+.+..|+++++.+ +||||+++++++...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999863 367889999986432 22345678899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++||||+++++|.+++.... .+++..+..++.|+++||.||| +.+++|+||+|.||+++.++.++++|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999999999987654 4788899999999999999999 9999999999999999999999999999987654
Q ss_pred CCCCcceeecccCCccccCccccCCCC--CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 544 REDQSTIQTQTLATIGYMAPEYGKEGR--VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 544 ~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
.... .......++..|+|||...+.. .+.++||||+|+++|||++|..||...... .......+..... .
T Consensus 157 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~------~ 228 (288)
T cd05583 157 AEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEISRRILKS------K 228 (288)
T ss_pred cccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHHHHHHcc------C
Confidence 3221 1222345788999999887655 788999999999999999999998532111 1111111110000 0
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLL 668 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~ 668 (678)
+. .+..++.++.+++.+||+.||++|||+.++.+.|+
T Consensus 229 ~~----------~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 229 PP----------FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CC----------CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 00 01123456889999999999999999888776654
No 363
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.6e-33 Score=285.09 Aligned_cols=249 Identities=29% Similarity=0.430 Sum_probs=200.9
Q ss_pred cCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEE
Q 005760 392 DGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 466 (678)
++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+..|+++++.++ ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999854 79999999986431 233466788999999998 99999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
|||+++++|.+++.+.+ .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 99999999999998765 4899999999999999999999 9999999999999999999999999999987654322
Q ss_pred Cc------------------ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhh
Q 005760 547 QS------------------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWV 608 (678)
Q Consensus 547 ~~------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~ 608 (678)
.. .......++..|+|||......++.++|+||+|++++++++|..||....... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~ 235 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL-TFQKIL 235 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHH
Confidence 11 22234457889999999888889999999999999999999999987533111 011100
Q ss_pred hcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCH----HHHHH
Q 005760 609 NDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINA----KEIVT 665 (678)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~----~ell~ 665 (678)
.. ....+ ...++.+.+++.+||+.+|++||++ .|+++
T Consensus 236 ~~-------~~~~~-------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 KL-------EYSFP-------------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred hc-------CCCCC-------------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 00 00000 1124558899999999999999999 77664
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.8e-33 Score=293.08 Aligned_cols=266 Identities=23% Similarity=0.297 Sum_probs=197.0
Q ss_pred HHHhhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCC--
Q 005760 387 LCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE-- 461 (678)
Q Consensus 387 ~~~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 461 (678)
+....++|++.+.||+|+||.||+|. ..++..||+|++.... ......+..|+++++.++||||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 44467889999999999999999997 4579999999985432 223456788999999999999999999886543
Q ss_pred ----eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeec
Q 005760 462 ----FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537 (678)
Q Consensus 462 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg 537 (678)
..++||||+ +++|.+++... .+++..+..++.|++.|++||| +.+|+||||+|+||+++.++.++++|||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 77999888653 4889999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc--CC
Q 005760 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL--PI 614 (678)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~--~~ 614 (678)
++...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||........ ......... +.
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 237 (343)
T cd07880 164 LARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMKVTGTPSK 237 (343)
T ss_pred cccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCH
Confidence 98754321 123457889999998766 4578899999999999999999999875322111 111000000 00
Q ss_pred cccccccCc--------cCCccchhh-HHHHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 005760 615 STKEIVDPN--------LLSREDINF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664 (678)
Q Consensus 615 ~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell 664 (678)
.+....... ......... .....++.++.+++.+|++.||++|||+.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 000000000 000000000 01123566789999999999999999999998
No 365
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4e-33 Score=291.96 Aligned_cols=266 Identities=22% Similarity=0.300 Sum_probs=194.7
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC------C
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE------E 461 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 461 (678)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999985 478999999986432 22335678899999999999999999988654 3
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
..++|+||+.. ++.++.. ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.+|++|||++..
T Consensus 94 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 46899999964 7776653 24788999999999999999999 99999999999999999999999999999875
Q ss_pred cCCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccc---
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK--- 617 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 617 (678)
.... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ...... ..+....
T Consensus 167 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~-~~~~~~-~~~~~~~~~~ 239 (342)
T cd07879 167 ADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILK-VTGVPGPEFV 239 (342)
T ss_pred CCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH-hcCCCCHHHH
Confidence 4221 123456888999998876 4588999999999999999999999975321110 110000 0000000
Q ss_pred ---------cccc-CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH--HHHHH
Q 005760 618 ---------EIVD-PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK--LLKIR 671 (678)
Q Consensus 618 ---------~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~--L~~~~ 671 (678)
.... ........... .....+.++.+++.+||+.||++||++.|++.. ++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 240 QKLEDKAAKSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHhcccchHHHHhhcCCcccchHHH-HhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000 00000000000 001245568899999999999999999999943 65554
No 366
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.3e-33 Score=293.74 Aligned_cols=267 Identities=23% Similarity=0.288 Sum_probs=194.8
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecC---------
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNE--------- 460 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------- 460 (678)
.++|...+.||.|+||.||+|.. .+|+.||+|.+........+.+.+|+++++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 46899999999999999999975 47899999998766555567788999999999999999999766443
Q ss_pred -----CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec-CCCcEEEE
Q 005760 461 -----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLS 534 (678)
Q Consensus 461 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~-~~~~~kl~ 534 (678)
...++|+||++ ++|.+++... .+++..+..++.||++|+.||| +.+++||||||+||+++ .++.++++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999997 5898888654 3788999999999999999999 99999999999999997 55678999
Q ss_pred eeccccccCCCCCc-ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc
Q 005760 535 DFGIAKLLTREDQS-TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL 612 (678)
Q Consensus 535 Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~ 612 (678)
|||.+......... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+. .........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~ 236 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILESVP 236 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcC
Confidence 99999765322111 11123457889999997654 4578899999999999999999999965332111 111110000
Q ss_pred CCc---cccc-------cc-CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 613 PIS---TKEI-------VD-PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 613 ~~~---~~~~-------~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
... .... .. ........... .....+.++.+++.+||+.||++||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRD-LLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHH-HccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 0000 00 00000000000 00124567889999999999999999999984
No 367
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.7e-33 Score=283.24 Aligned_cols=251 Identities=23% Similarity=0.333 Sum_probs=194.8
Q ss_pred CCCCCccccCCCceeEEEEEe----CCCcEEEEEEeeccc----CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeE
Q 005760 393 GFSENNLIGRGSFGSVFKARL----GDGMEVAMKVFNLQY----GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFK 463 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 463 (678)
+|++.+.||+|+||.||.|.. .+|..||+|++.... ....+.+..|+++++.+ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999975 378999999986532 22346678899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
++|+||+++++|.+++.... .+++..+..++.|+++|+.||| +.+++||||+|+||+++.++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999999997654 4788889999999999999999 9999999999999999999999999999987653
Q ss_pred CCCCcceeecccCCccccCccccCCC--CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 544 REDQSTIQTQTLATIGYMAPEYGKEG--RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 544 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
.... .......++..|+|||.+... .++.++||||||+++|+|++|..||...... ............. .
T Consensus 157 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~------~ 228 (290)
T cd05613 157 EDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISRRILKS------E 228 (290)
T ss_pred cccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHHHhhcc------C
Confidence 3221 112234578899999988653 4678999999999999999999998642111 1111111110000 0
Q ss_pred CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 005760 622 PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVT 665 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ell~ 665 (678)
+.. +..++..+.+++.+||+.||++|| ++.++++
T Consensus 229 ~~~----------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 PPY----------PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCC----------CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 000 112345688999999999999997 6777665
No 368
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.8e-33 Score=289.31 Aligned_cols=266 Identities=26% Similarity=0.335 Sum_probs=196.5
Q ss_pred HhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeec-CCeEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSN-EEFKA 464 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~ 464 (678)
..+++|++.+.||.|+||.||+|.. .+++.||+|++.... ....+.+..|+++++.++||||+++.+++.. ....+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 3678899999999999999999974 489999999875432 2334677889999999999999999998865 56788
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+++||+ +++|.+++... .++...+..++.|+++|++||| +.+++||||+|.||+++.++.++++|||.+.....
T Consensus 87 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 87 FVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred EEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 999998 56899888654 3678888899999999999999 99999999999999999999999999999875422
Q ss_pred CCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccc--h--------hhhhhcccC
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMT--L--------KHWVNDWLP 613 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~--~--------~~~~~~~~~ 613 (678)
. .....++..|+|||.+.+ ..++.++||||+||++|+|++|+.||......... . .++......
T Consensus 161 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 161 Q-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred C-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 1 123456788999998765 56899999999999999999999998653221000 0 000000000
Q ss_pred CcccccccCccCCccchhhH-HHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 614 ISTKEIVDPNLLSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
....+... ........... ....++.++.+++.+||+.+|++||++.|++..
T Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 236 ENTLRFVQ-SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhhHHHHh-hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 00000000000 001245678999999999999999999999764
No 369
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=8e-33 Score=281.88 Aligned_cols=263 Identities=26% Similarity=0.344 Sum_probs=198.5
Q ss_pred CCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
|+..+.||+|++|.||+|... +++.+|+|++.... ....+.+..|+++++.++|+|++++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999864 69999999987643 233466788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 471 PHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 471 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
+ ++|.+++......+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~ 154 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--T 154 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--c
Confidence 7 5999999876456899999999999999999999 89999999999999999999999999999876543221 2
Q ss_pred eecccCCccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh-----------cccCCcccc
Q 005760 551 QTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN-----------DWLPISTKE 618 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 618 (678)
.....++..|+|||.+.+. .++.++||||+||++||+++|+.||......+. ...... .........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-LFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCcHHHHHhhccccccc
Confidence 2234457789999988766 789999999999999999999999865322110 000000 000000000
Q ss_pred cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 619 IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..-+...... ..... ...+.++.+++.+||+.||++||++.|++.
T Consensus 234 ~~~~~~~~~~-~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 234 PTFPKFPPKD-LEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccCccc-hHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000000 00000 122567999999999999999999999975
No 370
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-34 Score=309.64 Aligned_cols=257 Identities=25% Similarity=0.331 Sum_probs=206.0
Q ss_pred HHHHhhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeec---ccCchhhhHHHHHHHHHhCCCccceeeeeeeecCC
Q 005760 386 ELCRATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNL---QYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEE 461 (678)
Q Consensus 386 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 461 (678)
++.-..++|.+.+.||+|+||.|..++.+ +++.+|+|++.. -......-|.+|-.+|..-+.+-|+.+...|++..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 44455789999999999999999999864 788999999865 23445577899999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
++|+||||++||||..++.+.. .+++..+..++..|+-||..+| +.|+|||||||.|||+|..|++|++|||.|-.
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHh
Confidence 9999999999999999999888 6899999999999999999999 99999999999999999999999999999988
Q ss_pred cCCCCCcceeecccCCccccCccccC----C-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcc
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGK----E-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 616 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~----~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (678)
+...+ .......+|||-|.+||++. + +.|+..+|.||+||++|||+.|..||+...-. ..|-+
T Consensus 225 m~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv----eTY~K------- 292 (1317)
T KOG0612|consen 225 MDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV----ETYGK------- 292 (1317)
T ss_pred cCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH----HHHHH-------
Confidence 76443 44556778999999999875 2 56899999999999999999999999863221 11111
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC---HHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN---AKEIVT 665 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps---~~ell~ 665 (678)
+++. .....++.....++++.+||.+.+. +|+.|.. +.++..
T Consensus 293 --Im~h----k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 293 --IMNH----KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred --Hhch----hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 1111 0011111112245667788887665 5677776 777653
No 371
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-34 Score=265.75 Aligned_cols=252 Identities=21% Similarity=0.254 Sum_probs=196.7
Q ss_pred hhcCCCCC-ccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeeec----CCe
Q 005760 390 ATDGFSEN-NLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCSN----EEF 462 (678)
Q Consensus 390 ~~~~~~~~-~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~ 462 (678)
.+++|++. ++||-|-.|.|-.... .+|+.+|+|++.. .....+|++..-.. .|||||.++++|.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45666654 5789999999998865 4899999999852 24446677765444 59999999998743 457
Q ss_pred EEEEEEecCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec---CCCcEEEEeecc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGI 538 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~---~~~~~kl~Dfg~ 538 (678)
+.+|||.++||.|.+.++.++. .+++.++..|++||+.|+.||| +.+|.||||||+|+|.. .+..+|++|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccccc
Confidence 7899999999999999987654 6889999999999999999999 99999999999999996 566899999999
Q ss_pred ccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc
Q 005760 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 618 (678)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (678)
|+.-.. ...-....-|+.|.|||++...+|+...|+||+||++|-|++|.+||+....... ..- +..
T Consensus 211 AK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai--spg--------Mk~ 277 (400)
T KOG0604|consen 211 AKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--SPG--------MKR 277 (400)
T ss_pred ccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC--Chh--------HHh
Confidence 986432 2233456789999999999999999999999999999999999999987433211 000 000
Q ss_pred cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 619 IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
-+ ..........++...+++..++++.+|+.+|++|.|+.|++.
T Consensus 278 rI---~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 278 RI---RTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred Hh---hccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 00 011111122344567888999999999999999999999875
No 372
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.9e-33 Score=291.49 Aligned_cols=270 Identities=23% Similarity=0.298 Sum_probs=198.0
Q ss_pred HHHHHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC-
Q 005760 385 LELCRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE- 460 (678)
Q Consensus 385 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~- 460 (678)
.++...+++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 45666789999999999999999999974 578999999986432 22345677899999999999999999987532
Q ss_pred -----CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 461 -----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 461 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
...+++++++ +++|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.+||+|
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~d 163 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 163 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEec
Confidence 3467888887 77998888654 3889999999999999999999 99999999999999999999999999
Q ss_pred eccccccCCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcc--c
Q 005760 536 FGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW--L 612 (678)
Q Consensus 536 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~--~ 612 (678)
||++...... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ......... .
T Consensus 164 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~ 237 (345)
T cd07877 164 FGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTP 237 (345)
T ss_pred cccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 9998754321 223467889999998766 467889999999999999999999986432211 111111100 0
Q ss_pred CCc-ccccccCc-------cCCccchhhHH-HHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 613 PIS-TKEIVDPN-------LLSREDINFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 613 ~~~-~~~~~~~~-------~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
+.. ...+.+.. ........+.. ....+.++.+++.+|++.||.+||++.|++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000 00000000 00000000000 01235668899999999999999999998853
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.9e-33 Score=293.10 Aligned_cols=263 Identities=24% Similarity=0.329 Sum_probs=196.4
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCe----
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEF---- 462 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 462 (678)
..++|++.+.||+|++|.||+|... +++.||+|++.... ......+.+|+.+++.++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999864 68899999986432 2234567789999999999999999988765544
Q ss_pred --EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 463 --KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 463 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
.++|+||+ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||+|+||+++.++.++|+|||++.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence 89999999 66999998764 4899999999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCcceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccc
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI 619 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (678)
..... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....... ..+.....+
T Consensus 167 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~-~~~~~~~~~ 239 (343)
T cd07851 167 HTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMN-LVGTPDEEL 239 (343)
T ss_pred ccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-hcCCCCHHH
Confidence 65322 223457888999998765 357889999999999999999999986532211 1111100 000000000
Q ss_pred ccCc-----------cCCccchhhHH-HHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 VDPN-----------LLSREDINFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ~~~~-----------~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.... .......++.. ....+.++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000 00000000000 1124677999999999999999999999875
No 374
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.9e-33 Score=278.40 Aligned_cols=247 Identities=22% Similarity=0.297 Sum_probs=192.3
Q ss_pred CCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc-----CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY-----GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
+|.+.+.||+|+||.||+|... .+..+++|+++... ......+..|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5788899999999999999754 34556666654311 12234566789999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 467 LEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
+||+++++|.+++.. ....+++..+..++.|++.|+.||| +.+++|+|++|+||+++. +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998864 2346889999999999999999999 999999999999999975 569999999987654
Q ss_pred CCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCc
Q 005760 544 REDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 623 (678)
Q Consensus 544 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (678)
... .......++..|+|||...+..++.++|+||+|+++|+|++|..||....... ........ ..+.
T Consensus 157 ~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~-----~~~~ 224 (260)
T cd08222 157 GSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS-----VVLRIVEG-----PTPS 224 (260)
T ss_pred CCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----HHHHHHcC-----CCCC
Confidence 322 22234457889999999888888999999999999999999999986422111 10000000 0000
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 624 LLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.+..++.++.+++.+||+.+|++||++.|+++
T Consensus 225 ----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 225 ----------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ----------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 01234567889999999999999999999975
No 375
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-34 Score=278.58 Aligned_cols=256 Identities=26% Similarity=0.424 Sum_probs=199.6
Q ss_pred cCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCc-------hhhhHHHHHHHHHhCCCccceeeeeeee-cCCe
Q 005760 392 DGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGR-------VFKSFDVECEMMKSIRHRNIIKVISSCS-NEEF 462 (678)
Q Consensus 392 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~ 462 (678)
++|-+.++||+|||+.||+|. ..+.+.||+|+-.....+ -.+...+|.++.+.|.||.||++|++|. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 457788899999999999996 567899999986544322 1244568999999999999999999984 5677
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee---cCCCcEEEEeeccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIA 539 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill---~~~~~~kl~Dfg~~ 539 (678)
+|-|+|||+|.+|.-+++..+. +++..+..|+.||+.||.||.+ .+.+|+|-|+||.|||+ +.-|.+||+|||++
T Consensus 543 FCTVLEYceGNDLDFYLKQhkl-mSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKL-MSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 8899999999999999987764 8888999999999999999994 47889999999999999 36689999999999
Q ss_pred cccCCCCCc-----ceeecccCCccccCccccCCC----CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhc
Q 005760 540 KLLTREDQS-----TIQTQTLATIGYMAPEYGKEG----RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVND 610 (678)
Q Consensus 540 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~ 610 (678)
+++...... ...+...||.+|++||.+.-+ +++.|+||||+||++|+++.|+.||...... ......
T Consensus 621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ----QdILqe 696 (775)
T KOG1151|consen 621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ----QDILQE 696 (775)
T ss_pred hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH----HHHHhh
Confidence 988754332 234567899999999976433 4688999999999999999999999752221 111110
Q ss_pred ccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 005760 611 WLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664 (678)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell 664 (678)
. ..+......++.+...+.++.++|++|+++--++|..+.++.
T Consensus 697 N-----------TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 697 N-----------TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred h-----------chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 0 011111122333334566788999999999999999888875
No 376
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-33 Score=239.99 Aligned_cols=263 Identities=25% Similarity=0.320 Sum_probs=201.8
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+|...++||+|.||+||+|+. .+++-||+|.++.+. ........+|+-+++.++|+|||++++....+..+.+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 466678999999999999985 468889999987653 33456778999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
|.. +|..+...-...++.+.+..++.|+++|+.++| ++++.|||+||.|.+++.+|+.|+.|||+++-++-. ..
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgip--vr 156 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP--VR 156 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc--eE
Confidence 955 999999887778999999999999999999999 999999999999999999999999999999876422 22
Q ss_pred eeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhh--------cccCCccccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVN--------DWLPISTKEI 619 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 619 (678)
-.+..+.|.+|.+|.++.+.+ |+...|+||.||++.|+.. |.+-|++..-.+ .+..... .|+ .+..+
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd-qlkrif~~lg~p~ed~wp--s~t~l 233 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEDQWP--SMTKL 233 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH-HHHHHHHHhCCCccccCC--ccccC
Confidence 345667899999999988876 8899999999999999998 555565432221 1222111 111 12233
Q ss_pred ccCccCCccchhhHHHH----HHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 620 VDPNLLSREDINFVAKE----QCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 620 ~~~~~~~~~~~~~~~~~----~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.|........... ... .....=.+++...+.-+|.+|.+++++++
T Consensus 234 pdyk~yp~ypatt-swsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATT-SWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccc-hHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 3333222211110 111 12222457888899999999999998875
No 377
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.1e-32 Score=285.38 Aligned_cols=267 Identities=23% Similarity=0.262 Sum_probs=191.2
Q ss_pred CCCCCccccCCCceeEEEEEeC-C--CcEEEEEEeeccc--CchhhhHHHHHHHHHhC-CCccceeeeeeeec----CCe
Q 005760 393 GFSENNLIGRGSFGSVFKARLG-D--GMEVAMKVFNLQY--GRVFKSFDVECEMMKSI-RHRNIIKVISSCSN----EEF 462 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~ 462 (678)
+|++.+.||+|+||.||+|... + +..||+|++.... ....+.+.+|+++++.+ +||||+++++.+.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999854 4 7889999986432 22345678899999999 59999999986532 245
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
.++++||+. ++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 788999885 58999886554 4889999999999999999999 999999999999999999999999999999765
Q ss_pred CCCCCc--ceeecccCCccccCccccCC-CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhccc--C-Ccc
Q 005760 543 TREDQS--TIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL--P-IST 616 (678)
Q Consensus 543 ~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~--~-~~~ 616 (678)
...... .......++..|+|||...+ ..++.++||||+||++|+|++|+.||...... ......+.... + ...
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 432211 11233568899999998765 46889999999999999999999998652211 00000000000 0 000
Q ss_pred cccccCc-------cCCccchhhH-HHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 KEIVDPN-------LLSREDINFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 ~~~~~~~-------~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..+.++. ........+. ....++..+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 0000000000 00123566889999999999999999999874
No 378
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=6.5e-32 Score=269.99 Aligned_cols=236 Identities=29% Similarity=0.335 Sum_probs=191.2
Q ss_pred ccCCCceeEEEEEeC-CCcEEEEEEeecccC---chhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCH
Q 005760 400 IGRGSFGSVFKARLG-DGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 400 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
||+|+||.||++... +++.+|+|++..... .....+..|+++++.++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999864 689999999865422 2345788899999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeeccc
Q 005760 476 EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTL 555 (678)
Q Consensus 476 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 555 (678)
.+++.... .+++..+..++.|++.|+.|+| +.+++|+||+|+||+++.++.++++|||++....... .......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFC 154 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCc
Confidence 99998765 4889999999999999999999 8999999999999999999999999999987654321 1234456
Q ss_pred CCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHH
Q 005760 556 ATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK 635 (678)
Q Consensus 556 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (678)
++..|+|||...+...+.++|+||||+++|++++|+.||..... ......+.. ..... +
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~------~~~~~-------------~ 213 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKILK------DPLRF-------------P 213 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhc------CCCCC-------------C
Confidence 78899999999888889999999999999999999999865332 111111100 00000 0
Q ss_pred HHHHHHHHHHHhhccccCcCCCCCHHH
Q 005760 636 EQCVSFVFNVAMECTVESPEQRINAKE 662 (678)
Q Consensus 636 ~~~~~~l~~l~~~cl~~dP~~Rps~~e 662 (678)
...+.++.+++.+||..||++||++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 112455789999999999999999944
No 379
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=291.59 Aligned_cols=298 Identities=22% Similarity=0.268 Sum_probs=172.1
Q ss_pred cccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECc
Q 005760 3 QMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFS 82 (678)
Q Consensus 3 ~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~ 82 (678)
+|.+|.++ .+|.......+|+.|+|.+|.|+.+..+++..++.|+.||||.|.|+.++.. .|..-.++++|+|+
T Consensus 108 ~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~-----sfp~~~ni~~L~La 181 (873)
T KOG4194|consen 108 NLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKP-----SFPAKVNIKKLNLA 181 (873)
T ss_pred eeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCC-----CCCCCCCceEEeec
Confidence 34444444 5554444444455555555555555455555555555555555555554432 24444445555555
Q ss_pred cCCCcccCChhhhhcccccccEEEcccccccccCCccc------------------------cCCCCCcEEEccCCccCC
Q 005760 83 NNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEI------------------------GNLTNLTIIYLGGNKLNG 138 (678)
Q Consensus 83 ~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~------------------------~~l~~L~~L~l~~N~l~~ 138 (678)
+|.|+.+.... |..+. +|.+|-|+.|+++...+..| .+|++|+.|.|..|.+..
T Consensus 182 ~N~It~l~~~~-F~~ln-sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~k 259 (873)
T KOG4194|consen 182 SNRITTLETGH-FDSLN-SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISK 259 (873)
T ss_pred ccccccccccc-ccccc-hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCccc
Confidence 55554333332 44444 44445555555544444444 444455555555555544
Q ss_pred cCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccc-cccc
Q 005760 139 SIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPL-TFWN 217 (678)
Q Consensus 139 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~-~~~~ 217 (678)
...++|..+.++++|+|..|++...-..++.+++.|+.|+|++|.|..+-+++++.+++|+.|+|++|+|+++++ .|..
T Consensus 260 L~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~ 339 (873)
T KOG4194|consen 260 LDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRV 339 (873)
T ss_pred ccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHH
Confidence 445555566666666666666665555566666666666666666666666666666666666666666666655 5666
Q ss_pred cccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcch---HHHhcccCCCceecccccccccCC
Q 005760 218 LKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIP---ASLEKLSYLKDLNLSFNKLEGEIP 294 (678)
Q Consensus 218 l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~N~~~~~~~ 294 (678)
+..|++|+|++|.+..+....|.+++ +|++|||++|.|+..+. .+|.+|++|..|.+.||++.....
T Consensus 340 L~~Le~LnLs~Nsi~~l~e~af~~ls----------sL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~k 409 (873)
T KOG4194|consen 340 LSQLEELNLSHNSIDHLAEGAFVGLS----------SLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPK 409 (873)
T ss_pred HHHhhhhcccccchHHHHhhHHHHhh----------hhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecch
Confidence 66666666666666665556666665 77777777777665443 456667777777777777765443
Q ss_pred C-CCccccccccccccCccccCCCC
Q 005760 295 R-GGSFGNFSAESFEGNELLCGSPN 318 (678)
Q Consensus 295 ~-~~~~~~l~~~~~~~n~~~c~~~~ 318 (678)
. +..++.|..+++.+|+...-.++
T Consensus 410 rAfsgl~~LE~LdL~~NaiaSIq~n 434 (873)
T KOG4194|consen 410 RAFSGLEALEHLDLGDNAIASIQPN 434 (873)
T ss_pred hhhccCcccceecCCCCcceeeccc
Confidence 3 35566777777777776655543
No 380
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=285.11 Aligned_cols=239 Identities=24% Similarity=0.309 Sum_probs=193.9
Q ss_pred hcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 468 (678)
++.|.....+|.|+|+.|-.+. ..+++..++|++.... .+-.+|+.++... +||||+++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 5678888889999999998886 4578899999997542 3334566665554 69999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeee-cCCCcEEEEeeccccccCCCCC
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLL-DDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill-~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
.+.++-+.+.+...+. .. ..+..|+.+|+.++.||| .+|+||||+||+|||+ ++.++++|+|||.+....+.
T Consensus 397 ~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred hccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 9999988888876654 22 677789999999999999 9999999999999999 69999999999999876433
Q ss_pred cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 548 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 548 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.....-|..|.|||++....|++++|+||||++||+|++|+.||.....+ ..+...+. .+.
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~-----------~~~---- 530 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQ-----------MPK---- 530 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhhc-----------CCc----
Confidence 23446788999999999999999999999999999999999999764443 11111110 000
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
.....+.++.+|+.+||+.||.+||++.|+..
T Consensus 531 ------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 531 ------FSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ------cccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 00345667899999999999999999999864
No 381
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.7e-32 Score=288.66 Aligned_cols=258 Identities=24% Similarity=0.330 Sum_probs=210.0
Q ss_pred HHHHHHhhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeee---
Q 005760 384 YLELCRATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCS--- 458 (678)
Q Consensus 384 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~--- 458 (678)
+..+...++.|++.+.||.|.+|.||+++ .++++.+|+|+...... ..+++..|+++++.. .|||++.++|++.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 44455677889999999999999999997 45899999999865533 346778899999987 5999999999873
Q ss_pred --cCCeEEEEEEecCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 459 --NEEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 459 --~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
.++.+++|||||.+|+..|+++.- +..+.+..+..|.+.++.|+.+|| ...++|||||-.||+++.++.||++|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEee
Confidence 367999999999999999999754 346889999999999999999999 99999999999999999999999999
Q ss_pred eccccccCCCCCcceeecccCCccccCccccCCC-----CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhc
Q 005760 536 FGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG-----RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVND 610 (678)
Q Consensus 536 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~ 610 (678)
||.+..++. +-.......||+.|||||++.-. .|+.++|+||+|++..||--|.+|+.++.+....+.
T Consensus 167 FGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~----- 239 (953)
T KOG0587|consen 167 FGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFL----- 239 (953)
T ss_pred eeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhcc-----
Confidence 999987653 33345667899999999987643 367789999999999999999999876544322111
Q ss_pred ccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 611 WLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+. ...+..+..++.-..++.++|..|+.+|-++||++.++++
T Consensus 240 ---------Ip----RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 240 ---------IP----RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ---------CC----CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 00 1111223334456777999999999999999999999875
No 382
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=1e-31 Score=302.83 Aligned_cols=146 Identities=29% Similarity=0.438 Sum_probs=131.0
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ......+..|+.+++.++||||+++++++...+..|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367899999999999999999865 78999999986532 22346678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
|||+.+++|.+++.... .+++..++.++.||+.||+||| .++|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997654 4788889999999999999999 8999999999999999999999999999985
No 383
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=8.6e-33 Score=269.06 Aligned_cols=243 Identities=21% Similarity=0.268 Sum_probs=194.0
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc---CchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY---GRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 464 (678)
...+|..+..||+|+||.|-+|..+ +.+.+|||+++.+. ....+--+.|-+++... +-|.++++..+|+..+.+|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 3457888999999999999999744 66789999987542 12223345577777755 5789999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+||||+.||+|--.++..+. +.+..++.++.+||-||-+|| ++||+.||+|..|||+|.+|++||+|||+++.---
T Consensus 427 FVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 99999999999888887664 677788899999999999999 99999999999999999999999999999975332
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
.+ .......||+.|+|||++....|+..+|.||+||+||||+.|++||++.++.+.- +.+ .+...
T Consensus 503 ~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF--~aI-----------~ehnv 567 (683)
T KOG0696|consen 503 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF--QAI-----------MEHNV 567 (683)
T ss_pred CC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHH-----------HHccC
Confidence 22 2234578999999999999999999999999999999999999999885544321 111 11110
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN 659 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps 659 (678)
. -+...+.++.++.+..+.+.|.+|..
T Consensus 568 s--------yPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 568 S--------YPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred c--------CcccccHHHHHHHHHHhhcCCccccC
Confidence 0 11234556788999999999999973
No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1e-31 Score=266.09 Aligned_cols=220 Identities=20% Similarity=0.160 Sum_probs=175.4
Q ss_pred CCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCHHHHhhh
Q 005760 403 GSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS 481 (678)
Q Consensus 403 G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 481 (678)
|.+|.||++.. .+++.+|+|.+.... .+..|...+....|||++++++++.+.+..++||||+++++|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999975 578999999986532 233455555556799999999999999999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccCCcccc
Q 005760 482 SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561 (678)
Q Consensus 482 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~ 561 (678)
.. .+++..+..++.|+++|++||| +++++||||||+||+++.++.++++|||.+...... .....++..|+
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~ 149 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYC 149 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCcccc
Confidence 54 4889999999999999999999 999999999999999999999999999987654322 12234567799
Q ss_pred CccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHH
Q 005760 562 APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSF 641 (678)
Q Consensus 562 aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (678)
|||...+..++.++||||+|+++|||++|..|+....... .. ...+. .+..+++.
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------~~-----~~~~~-------------~~~~~~~~ 204 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------NT-----HTTLN-------------IPEWVSEE 204 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------cc-----ccccC-------------CcccCCHH
Confidence 9999988889999999999999999999998864311100 00 00000 01123456
Q ss_pred HHHHHhhccccCcCCCCCHH
Q 005760 642 VFNVAMECTVESPEQRINAK 661 (678)
Q Consensus 642 l~~l~~~cl~~dP~~Rps~~ 661 (678)
+.+++.+|++.||++||++.
T Consensus 205 ~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHHccCCHHHhcCCC
Confidence 88999999999999999973
No 385
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=8.7e-34 Score=261.54 Aligned_cols=250 Identities=28% Similarity=0.285 Sum_probs=190.6
Q ss_pred CccccCCCceeEEEEEe-CCCcEEEEEEeecccC-chhhhHHHHHHH-HHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 397 NNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG-RVFKSFDVECEM-MKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
...||.|+||+|++-.. +.|+..|||+++.... ....++..|.+. +++-++||||++||.+-.++..++.||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 56799999999999875 4799999999976543 455677777775 4455799999999998888889999999943
Q ss_pred CHHHHhh---h-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcc
Q 005760 474 SLEKYLH---S-SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 474 ~L~~~l~---~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
++..+-. . ....+++...-.|..-.+.||.||-+ ...|+|||+||+|||++..|.||+||||.+-.+.. +.
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~---Si 222 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD---SI 222 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHH---HH
Confidence 6654432 1 22357888888888889999999996 78899999999999999999999999999865532 33
Q ss_pred eeecccCCccccCccccCCC--CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 550 IQTQTLATIGYMAPEYGKEG--RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
..+...|-..|||||.+... .|+.+|||||+|++|||+.||..|+..+...-..+.+.+...+|. +...
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~---------l~~~ 293 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPI---------LLFD 293 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCe---------ecCc
Confidence 34556788899999987643 489999999999999999999999877554333333333222211 1111
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.. -...+..+..++..|+.+|-..||+..+++++
T Consensus 294 ~~-----~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 294 KE-----CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cc-----ccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 00 01234558899999999999999999998763
No 386
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.7e-32 Score=255.88 Aligned_cols=249 Identities=23% Similarity=0.295 Sum_probs=199.1
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecc---cCchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 464 (678)
.-++|+..+.||.|+|+.|-+++. ++.+-+|+|+++.. ..+..+-.+.|..+.... +||.+|.+..+|+.+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 346899999999999999999985 57888999998754 334455667788887766 6999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCC
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~ 544 (678)
+|.||++||+|--++++++. ++++++..+..+|.-||.||| ++||+.||+|..||++|..|++|++|+|+++.--.
T Consensus 328 fvieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 99999999999888877764 899999999999999999999 99999999999999999999999999999975432
Q ss_pred CCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCc--ccCCccchhhhhhcccCCcccccccC
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDE--IFNGEMTLKHWVNDWLPISTKEIVDP 622 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (678)
.....+..+||+.|.|||++.+..|...+|.|++||+++||+.|+.||+. +.+.++.-..+.-...-+ .++--|
T Consensus 404 --~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile--kqirip 479 (593)
T KOG0695|consen 404 --PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE--KQIRIP 479 (593)
T ss_pred --CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh--hccccc
Confidence 23344678899999999999999999999999999999999999999974 233333323322111100 011111
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCC
Q 005760 623 NLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRIN 659 (678)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps 659 (678)
. ..+..+..+++..+++||.+|..
T Consensus 480 r-------------slsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 480 R-------------SLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred c-------------eeehhhHHHHHHhhcCCcHHhcC
Confidence 1 12333567889999999999863
No 387
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-32 Score=273.21 Aligned_cols=242 Identities=21% Similarity=0.372 Sum_probs=194.8
Q ss_pred CccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCC
Q 005760 397 NNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
.+.||+|.||+||-|.. ++|+.||||++.+.. ....+.+..|+.+++.++||.||.+-.-|+.++..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 47899999999999974 589999999996532 23347788999999999999999999999999999999999955
Q ss_pred CHHHHh-hhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec---CCCcEEEEeeccccccCCCCCcc
Q 005760 474 SLEKYL-HSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDQST 549 (678)
Q Consensus 474 ~L~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~---~~~~~kl~Dfg~~~~~~~~~~~~ 549 (678)
+..+++ ......+++.....+..||+.||.||| -++|+|+|+||+|||+. .-.++||||||+|+..+.. .
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk---s 721 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK---S 721 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchh---h
Confidence 665555 455567999999999999999999999 99999999999999995 3458999999999987532 3
Q ss_pred eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccc
Q 005760 550 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 629 (678)
Q Consensus 550 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (678)
.....+||+.|+|||++..+.|...-|+||.||++|--++|..||.. ++++.+.++. ...+..|.
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE----dEdIndQIQN-----AaFMyPp~------ 786 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE----DEDINDQIQN-----AAFMYPPN------ 786 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC----ccchhHHhhc-----cccccCCC------
Confidence 34567899999999999999999999999999999999999999864 2222222110 00001111
Q ss_pred hhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 005760 630 INFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664 (678)
Q Consensus 630 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell 664 (678)
.+.+.++++.++|...++..=.+|-|+.+.+
T Consensus 787 ----PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 787 ----PWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ----chhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 1234566788999999999999999987654
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-33 Score=277.81 Aligned_cols=243 Identities=21% Similarity=0.276 Sum_probs=199.1
Q ss_pred hcCCCCCccccCCCceeEEEEEeCCCc-EEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGDGM-EVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALV 466 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~~~-~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 466 (678)
-.++..+..||-||||.|=++..+... .+|+|+++.. .....+.+..|-.+|...+.|.||++|-.|.+....|++
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 345666788999999999999865433 3788887542 334557788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
||-|-||.++..++..+. ++..+...++..+++|++||| +++||.||+||+|.++|.+|-+|+.|||+|+..+...
T Consensus 499 mEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 999999999999987765 888888999999999999999 9999999999999999999999999999999886443
Q ss_pred CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCC
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 626 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (678)
.....+||+.|.|||++.....+.++|.||+|+++||+++|.+||.+..+..... ...+.. ..+
T Consensus 575 ---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn-~ILkGi-----d~i------- 638 (732)
T KOG0614|consen 575 ---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN-LILKGI-----DKI------- 638 (732)
T ss_pred ---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH-HHHhhh-----hhh-------
Confidence 3345789999999999999999999999999999999999999998755432211 111110 001
Q ss_pred ccchhhHHHHHHHHHHHHHHhhccccCcCCCCC
Q 005760 627 REDINFVAKEQCVSFVFNVAMECTVESPEQRIN 659 (678)
Q Consensus 627 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps 659 (678)
..|........+++++.+..+|.+|..
T Consensus 639 ------~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 ------EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ------hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 111234455778999999999999985
No 389
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-32 Score=262.29 Aligned_cols=265 Identities=22% Similarity=0.312 Sum_probs=197.6
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCC--Ccc----ceeeeeeeecCCeE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR--HRN----IIKVISSCSNEEFK 463 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~n----iv~~~~~~~~~~~~ 463 (678)
+++|.+...+|+|.||.|-..-. ..+..||||+++.- ....++...|+++++++. .|+ +|.+.++|.-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 68899999999999999999853 45899999998643 234566778999999983 233 77888899999999
Q ss_pred EEEEEecCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC---------------
Q 005760 464 ALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD--------------- 527 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~--------------- 527 (678)
++|+|.+ |.++.+++..+.. +++..++..|+.|+++++++|| +.+++|-|+||+||++-+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999988 6699999987543 7899999999999999999999 999999999999999831
Q ss_pred -----CCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCcc
Q 005760 528 -----NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEM 602 (678)
Q Consensus 528 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~ 602 (678)
+..++++|||.|+.-... .+..+.|..|.|||++.+-.++.++||||+||+|+|+.+|..-|+...+.+-
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH 317 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH 317 (415)
T ss_pred eccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence 346899999999764322 2456789999999999999999999999999999999999998876442210
Q ss_pred -chhhhhhcccCCcc-ccc----------cc-CccCC----------ccchhh--HHHHHHHHHHHHHHhhccccCcCCC
Q 005760 603 -TLKHWVNDWLPIST-KEI----------VD-PNLLS----------REDINF--VAKEQCVSFVFNVAMECTVESPEQR 657 (678)
Q Consensus 603 -~~~~~~~~~~~~~~-~~~----------~~-~~~~~----------~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~R 657 (678)
..-+.+-+-.|..+ ... +| ++... ...... ........++++|+.+|+.+||.+|
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R 397 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR 397 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence 00011100000000 000 00 00000 000110 1112345669999999999999999
Q ss_pred CCHHHHHH
Q 005760 658 INAKEIVT 665 (678)
Q Consensus 658 ps~~ell~ 665 (678)
+|+.|++.
T Consensus 398 iTl~EAL~ 405 (415)
T KOG0671|consen 398 ITLREALS 405 (415)
T ss_pred ccHHHHhc
Confidence 99999975
No 390
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=2.3e-30 Score=257.09 Aligned_cols=238 Identities=31% Similarity=0.380 Sum_probs=192.7
Q ss_pred CceeEEEEEeC-CCcEEEEEEeecccCch-hhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCHHHHhhh
Q 005760 404 SFGSVFKARLG-DGMEVAMKVFNLQYGRV-FKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS 481 (678)
Q Consensus 404 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 481 (678)
+||.||+|... +++.+|+|++....... .+.+.+|++.++.++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999865 58999999997654433 67889999999999999999999999998999999999999999999976
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccCCcccc
Q 005760 482 SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYM 561 (678)
Q Consensus 482 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~ 561 (678)
... +++..+..++.+++.++.+|| +.+++|+||+|.||+++.++.++++|||.+....... ......++..|+
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~ 153 (244)
T smart00220 81 RGR-LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYM 153 (244)
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCC
Confidence 654 788999999999999999999 8999999999999999999999999999998764332 233456788999
Q ss_pred CccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHH
Q 005760 562 APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSF 641 (678)
Q Consensus 562 aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (678)
+||...+..++.++||||+|+++|++++|..||....... ...+....... .... ....++.+
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-~~~~~~~~~~~----~~~~------------~~~~~~~~ 216 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-ELFKKIGKPKP----PFPP------------PEWKISPE 216 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHhccCC----CCcc------------ccccCCHH
Confidence 9999988888999999999999999999999986532211 11111110000 0000 00004456
Q ss_pred HHHHHhhccccCcCCCCCHHHHHH
Q 005760 642 VFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 642 l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 889999999999999999999986
No 391
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.1e-30 Score=286.96 Aligned_cols=258 Identities=22% Similarity=0.260 Sum_probs=168.8
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-C----CcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeee------ee
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-D----GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISS------CS 458 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------~~ 458 (678)
..++|.+.+.||+|+||.||+|... + +..||+|++..... .+....| .++...+.++..+... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999864 5 78999998753221 1111111 1122222233222221 24
Q ss_pred cCCeEEEEEEecCCCCHHHHhhhCCCC-------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCC
Q 005760 459 NEEFKALVLEYMPHGSLEKYLHSSNYI-------------------LDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLK 519 (678)
Q Consensus 459 ~~~~~~lv~e~~~~~~L~~~l~~~~~~-------------------~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~ 519 (678)
.....++|+||+++++|.+++...... .....+..++.|++.||+||| +++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 566789999999999999998754321 112345679999999999999 9999999999
Q ss_pred CCCeeecC-CCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCC----------------------CCCccch
Q 005760 520 PSNVLLDD-NMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEG----------------------RVSANGD 576 (678)
Q Consensus 520 ~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------------------~~~~~~D 576 (678)
|+|||++. ++.+||+|||+++..... .........+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~-~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVG-INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccc-cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 689999999999765322 22233456789999999954322 2345679
Q ss_pred HHHHHHHHHHHHcCCCCCCcccC--------CccchhhhhhcccCCcccccccCccCCccchh-hHHHHHHHHHHHHHHh
Q 005760 577 VYSFGIMLMETFTRKKPTDEIFN--------GEMTLKHWVNDWLPISTKEIVDPNLLSREDIN-FVAKEQCVSFVFNVAM 647 (678)
Q Consensus 577 vwslGv~l~ell~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~ 647 (678)
|||+||++|||+++..|++.... .......|... ..+. ....... +...........+|+.
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~d~~~~~~~dLi~ 431 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKL---------VEPR-ASPDLRRGFEVLDLDGGAGWELLK 431 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHh---------hccc-cchhhhhhhhhccccchHHHHHHH
Confidence 99999999999997766543110 01111112111 1110 0000000 0000011233568999
Q ss_pred hccccCcCCCCCHHHHHH
Q 005760 648 ECTVESPEQRINAKEIVT 665 (678)
Q Consensus 648 ~cl~~dP~~Rps~~ell~ 665 (678)
+|+++||++|||+.|+++
T Consensus 432 ~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 432 SMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHccCCcccCCCHHHHhC
Confidence 999999999999999986
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.7e-31 Score=268.27 Aligned_cols=206 Identities=23% Similarity=0.359 Sum_probs=175.2
Q ss_pred CCCCCccccCCCceeEEEEE-eCCCcEEEEEEeeccc---CchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY---GRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
-|..++.||-|+||.|.+++ .++...+|+|.+++.+ ......++.|-.||...+.+-||++|..|++++.+|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 47778899999999999996 5566779999986542 2344667789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC--CC-
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT--RE- 545 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~--~~- 545 (678)
|++||++-.++-+.+ .+++.-+..++.++.-|+++.| +.|+|||||||.|||||.+|++||+|||+|+-+. ..
T Consensus 710 YIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred ccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceecccc
Confidence 999999999987665 4788888889999999999999 9999999999999999999999999999996331 00
Q ss_pred -----CCc--------------------------------ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHH
Q 005760 546 -----DQS--------------------------------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETF 588 (678)
Q Consensus 546 -----~~~--------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell 588 (678)
+.. ......+||+.|+|||++....|+..+|.||.||+||||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 000 0112346999999999999999999999999999999999
Q ss_pred cCCCCCCcccCCcc
Q 005760 589 TRKKPTDEIFNGEM 602 (678)
Q Consensus 589 ~g~~p~~~~~~~~~ 602 (678)
.|+.||.+..+++.
T Consensus 866 ~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 866 VGQPPFLADTPGET 879 (1034)
T ss_pred hCCCCccCCCCCcc
Confidence 99999987666654
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=3.8e-30 Score=275.13 Aligned_cols=261 Identities=20% Similarity=0.266 Sum_probs=179.5
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-----------------CCCcEEEEEEeecccCchh--------------hhHHHH
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-----------------GDGMEVAMKVFNLQYGRVF--------------KSFDVE 438 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~--------------~~~~~e 438 (678)
..++|++.++||+|+||.||+|.. ..++.||||.+........ +....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999953 2456899999865432222 223346
Q ss_pred HHHHHhCCCccc-----eeeeeeeec--------CCeEEEEEEecCCCCHHHHhhhCCC---------------------
Q 005760 439 CEMMKSIRHRNI-----IKVISSCSN--------EEFKALVLEYMPHGSLEKYLHSSNY--------------------- 484 (678)
Q Consensus 439 ~~~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~~--------------------- 484 (678)
+.++..++|.++ ++++++|.. .+..++||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 667776643 3567999999999999999874311
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccCCccccC
Q 005760 485 --ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMA 562 (678)
Q Consensus 485 --~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a 562 (678)
..++..+..++.|++.|+.|+| +.+|+||||||+||+++.++.+||+|||++....... ........+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeC
Confidence 2356678889999999999999 8999999999999999999999999999997553221 111122345789999
Q ss_pred ccccCCCCC----------------------CccchHHHHHHHHHHHHcCCC-CCCcccCCccchhhh---hhcccCCcc
Q 005760 563 PEYGKEGRV----------------------SANGDVYSFGIMLMETFTRKK-PTDEIFNGEMTLKHW---VNDWLPIST 616 (678)
Q Consensus 563 PE~~~~~~~----------------------~~~~DvwslGv~l~ell~g~~-p~~~~~~~~~~~~~~---~~~~~~~~~ 616 (678)
||.+..... ..+.||||+||++|||++|.. |+............+ ...|....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~- 457 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK- 457 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc-
Confidence 998654321 234699999999999999875 664321111111110 00010000
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCc---CCCCCHHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESP---EQRINAKEIVT 665 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~Rps~~ell~ 665 (678)
....++......++...+++.+|+..+| .+|+|++|+++
T Consensus 458 ----------~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 458 ----------GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred ----------ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0000111112245668899999999866 68999999985
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-31 Score=280.57 Aligned_cols=243 Identities=26% Similarity=0.425 Sum_probs=187.9
Q ss_pred CCCCccccCCCcee-EEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeeeeeecCCeEEEEEEecC
Q 005760 394 FSENNLIGRGSFGS-VFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 394 ~~~~~~ig~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
|.-.+.+|.|+.|+ ||+|.. +|++||||++-.. ......+|++.++.- +|||||++++.-.++...|++.|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 44456789999876 599998 6889999998532 234557899999977 59999999999999999999999996
Q ss_pred CCCHHHHhhhCCC---CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-----CCcEEEEeeccccccC
Q 005760 472 HGSLEKYLHSSNY---ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-----NMVAHLSDFGIAKLLT 543 (678)
Q Consensus 472 ~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-----~~~~kl~Dfg~~~~~~ 543 (678)
. +|.+++..... .......+....|+++|+++|| +.+|||||+||.||||+. ...++|+|||+++.+.
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 6 99999987421 1111344678899999999999 999999999999999974 3578999999999886
Q ss_pred CCCCcc-eeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcccCCccccccc
Q 005760 544 REDQST-IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 621 (678)
Q Consensus 544 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (678)
...... ......||.+|+|||.+....-+.++||||+||++|+.++ |.+||.+....+..+.. .
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~---~----------- 728 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT---G----------- 728 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc---C-----------
Confidence 543322 3456789999999999999888889999999999999999 58999764433221111 0
Q ss_pred CccCCccchhhHHH-HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 622 PNLLSREDINFVAK-EQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 622 ~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
........+ .++ ++.+||.+|+.++|..||+|.+|+.
T Consensus 729 -----~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 729 -----NYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -----ccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 000000000 112 6889999999999999999999974
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=3.7e-30 Score=232.48 Aligned_cols=262 Identities=21% Similarity=0.332 Sum_probs=193.5
Q ss_pred hhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCC-CccceeeeeeeecC--CeEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR-HRNIIKVISSCSNE--EFKAL 465 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~l 465 (678)
..++|++.+++|.|.++.||.|. ..+.+.++||++++- ..+.+.+|+.+++.++ ||||+++++...++ ..+.+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 34679999999999999999997 567889999999753 3477889999999997 99999999998664 46779
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-CCcEEEEeeccccccCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-~~~~kl~Dfg~~~~~~~ 544 (678)
++||+++.+...+-. .++...+..++.+++.||.|+| ++||+|||+||.|+++|. .-..+++|+|+|..+.+
T Consensus 113 iFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 999999977766553 2677788899999999999999 999999999999999984 56799999999988764
Q ss_pred CCCcceeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCc-ccCCc-----------cchhhhhhcc
Q 005760 545 EDQSTIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDE-IFNGE-----------MTLKHWVNDW 611 (678)
Q Consensus 545 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~-~~~~~-----------~~~~~~~~~~ 611 (678)
.... .-.+.+..|--||.+...+ |+..-|+|||||++..|+-.+.||-. ..+.+ ..+..++..+
T Consensus 186 ~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 186 GKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred Ccee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 4332 3345677899999877654 78889999999999999999999732 21111 1111111111
Q ss_pred c---CCcccccccCccCCccchhhHH---HHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 612 L---PISTKEIVDPNLLSREDINFVA---KEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 612 ~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. +.....++..-... .-..+.. ..-.++++.+++...+.+|-.+|+||+|++.
T Consensus 263 ~i~Ldp~~~~i~~~~~rk-~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRK-PWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ccCCChhHhhHhhccccc-cHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0 00111111000000 0000000 1123577899999999999999999999875
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=5.5e-30 Score=227.99 Aligned_cols=215 Identities=26% Similarity=0.335 Sum_probs=170.7
Q ss_pred HhhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeeccc-CchhhhHHHHHHHHH-hCCCccceeeeeeeecCCeEEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQY-GRVFKSFDVECEMMK-SIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~l 465 (678)
...+....+..||+|++|.|-+.+ ..+|+..|+|.++..- .+..++...|+.+.. ...+|++|.++|........++
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 344455556789999999998886 4589999999986542 344566677777654 4579999999999888888999
Q ss_pred EEEecCCCCHHHHhh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccccc
Q 005760 466 VLEYMPHGSLEKYLH---SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 466 v~e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~ 542 (678)
.||.|.. +|..+-+ ..+...++..+-+|+..+.+||.|||+ +..++|||+||+|||++.+|+||+||||.+-.+
T Consensus 123 cME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 123 CMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred eHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceee
Confidence 9999954 7765543 344568888899999999999999996 789999999999999999999999999998766
Q ss_pred CCCCCcceeecccCCccccCccccCC----CCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhh
Q 005760 543 TREDQSTIQTQTLATIGYMAPEYGKE----GRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVN 609 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 609 (678)
.++- ..+-..|-..|||||.+.. ..|+.++||||+|+.+.||.+++.||+.+...-..+.+.+.
T Consensus 200 ~dSi---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 200 VDSI---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred hhhh---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 4332 2233457778999998653 36899999999999999999999999887665555555443
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-31 Score=247.32 Aligned_cols=262 Identities=23% Similarity=0.348 Sum_probs=190.6
Q ss_pred CCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCCCccceeeeeeeecC-----CeEEEE
Q 005760 395 SENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIRHRNIIKVISSCSNE-----EFKALV 466 (678)
Q Consensus 395 ~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv 466 (678)
+-.+.||.|+||.||.+++ ++|+.||+|++..-.. ...+.+.+|+.++..++|.|++..++..+-. ..+|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3458999999999999975 5899999999854322 2457788999999999999999888766433 246788
Q ss_pred EEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCC
Q 005760 467 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 546 (678)
Q Consensus 467 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~ 546 (678)
+|.+ ..+|...+-... .++...+.-+..||++||.||| +.+|.||||||.|.+++++...||||||+++.....
T Consensus 136 TELm-QSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d- 209 (449)
T KOG0664|consen 136 TELM-QSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR- 209 (449)
T ss_pred HHHH-HhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchh-
Confidence 8888 458887775443 5888888889999999999999 999999999999999999999999999999876433
Q ss_pred CcceeecccCCccccCccccCCCC-CCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc-------
Q 005760 547 QSTIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE------- 618 (678)
Q Consensus 547 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 618 (678)
.....+..+.|..|.|||++++.+ |+.+.||||.||++.|++.++.-|....+ ....+.+.+....+..+
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P--iqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP--IEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh--HHHHHHHHHHhCCCcHHHHHHHhh
Confidence 333456677899999999998864 89999999999999999988877754221 11111111111111000
Q ss_pred -----ccc-----CccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 619 -----IVD-----PNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 619 -----~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
+.. |+.... +....+.....+...+...++..||++|.+..+.+..
T Consensus 288 GAk~H~LR~~~k~Ps~~vL--YtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRL--YKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hhHHHhhccCCCCCCccce--eeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 000 110000 0011111223346678889999999999999987654
No 398
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=4.7e-31 Score=269.08 Aligned_cols=294 Identities=26% Similarity=0.379 Sum_probs=238.5
Q ss_pred cccCCcCcc-cCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEEC
Q 005760 3 QMWENNFSG-TIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISF 81 (678)
Q Consensus 3 ~l~~~~~~~-~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L 81 (678)
+++.|+++. -+|..++.++.|+.|||++|+++ ..|..+.+-+++-.|+||+|+|..+|..+ |.++.-|-+|+|
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~l-----finLtDLLfLDL 157 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSL-----FINLTDLLFLDL 157 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchH-----HHhhHhHhhhcc
Confidence 455566643 46677788888888888888887 66777778888888888888888877654 667777788888
Q ss_pred ccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccC-CcCChhhhccCCCCEEEccCCcC
Q 005760 82 SNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLN-GSIPSTLGKLQKLQGLGLENNKL 160 (678)
Q Consensus 82 ~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~L~~n~i 160 (678)
|+|++....|+ +..+. .|++|.|++|.+....-.-+..+++|+.|.+++.+=+ ..+|..+.++.+|..++|+.|.+
T Consensus 158 S~NrLe~LPPQ--~RRL~-~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~L 234 (1255)
T KOG0444|consen 158 SNNRLEMLPPQ--IRRLS-MLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNL 234 (1255)
T ss_pred ccchhhhcCHH--HHHHh-hhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCC
Confidence 88887644433 45555 6788888888776443333445677777777775432 35788899999999999999999
Q ss_pred CCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCC-CCccc
Q 005760 161 EGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGP-LPLEI 239 (678)
Q Consensus 161 ~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~-~~~~~ 239 (678)
. .+|+.+.++++|+.|+||+|.|+ .+........+|++|+||.|+|+.+|.+++++++|+.|.+.+|+++-. +|..+
T Consensus 235 p-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSGI 312 (1255)
T KOG0444|consen 235 P-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSGI 312 (1255)
T ss_pred C-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCCccch
Confidence 9 88999999999999999999999 555667778899999999999999999999999999999999998733 46677
Q ss_pred cccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCCCccccccccccccCccccCCCC
Q 005760 240 GNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPN 318 (678)
Q Consensus 240 ~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~l~~~~~~~n~~~c~~~~ 318 (678)
+.+. +|+++..++|++. ..|..+..+.+|+.|.|+.|.+-..+.....++.+..+++..||...-.|.
T Consensus 313 GKL~----------~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 313 GKLI----------QLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred hhhh----------hhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCccCCCC
Confidence 7766 9999999999998 899999999999999999999998888888899999999999998766553
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-29 Score=254.12 Aligned_cols=198 Identities=23% Similarity=0.349 Sum_probs=169.5
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeeccc--------CchhhhHHHHHHHHHhCC---Cccceeeeeeee
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQY--------GRVFKSFDVECEMMKSIR---HRNIIKVISSCS 458 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~ 458 (678)
..+|+..+.+|+|+||.|+.|.++ +...|+||.+.+.. ....-.+-.|+++|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 346899999999999999999865 56779999885432 112234567999999997 999999999999
Q ss_pred cCCeEEEEEEe-cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeec
Q 005760 459 NEEFKALVLEY-MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG 537 (678)
Q Consensus 459 ~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg 537 (678)
+.+.+|++||- -++.+|.+++..... +++.....|++||+-|+++|| +.+|||||||-+||.++.+|-+|++|||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeecc
Confidence 99999999996 456799999986654 888899999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccCCccccCccccCCCCCC-ccchHHHHHHHHHHHHcCCCCCCc
Q 005760 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVS-ANGDVYSFGIMLMETFTRKKPTDE 596 (678)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGv~l~ell~g~~p~~~ 596 (678)
.+.... .......+||..|.|||++.+..|- ..-|||++|++||-++....||+.
T Consensus 716 saa~~k----sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 716 SAAYTK----SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred chhhhc----CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 986543 2234557899999999999999885 457999999999999999999864
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.5e-27 Score=231.34 Aligned_cols=210 Identities=35% Similarity=0.559 Sum_probs=183.0
Q ss_pred ccCCCceeEEEEEeC-CCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCHHH
Q 005760 400 IGRGSFGSVFKARLG-DGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEK 477 (678)
Q Consensus 400 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 477 (678)
||+|++|.||++... +++.+++|++...... ..+.+.+|++.++.++|++++++++++...+..++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999865 4899999999755332 34678899999999999999999999999899999999999999999
Q ss_pred HhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-CCcEEEEeeccccccCCCCCcceeecccC
Q 005760 478 YLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTREDQSTIQTQTLA 556 (678)
Q Consensus 478 ~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 556 (678)
++.......++..+..++.++++++.+|| +.+++|+||+|.||+++. ++.++++|||.+........ ......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~ 155 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVG 155 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccC
Confidence 99876445889999999999999999999 899999999999999999 89999999999976543221 2233557
Q ss_pred CccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHH
Q 005760 557 TIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAK 635 (678)
Q Consensus 557 ~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (678)
...|++||..... .++.++|+|++|++++++
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 8889999998877 788999999999999999
Q ss_pred HHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 636 EQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 636 ~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 236789999999999999999999875
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=7.4e-30 Score=263.02 Aligned_cols=254 Identities=27% Similarity=0.412 Sum_probs=205.1
Q ss_pred hhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
..++|+..+.+|.|.||.||+|+. ..++..|+|+++.......+.+.+|+-+++..+||||+.++|.+...+..+++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 456899999999999999999985 4789999999998888888888999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
||.+|+|.+.=+-.+ ++++.++..+.++.++|++||| +.+=+|||||..||++++.|.+|+.|||.+..++. +-
T Consensus 93 ycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita--ti 166 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--TI 166 (829)
T ss_pred ecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh--hh
Confidence 999999998776554 4888999999999999999999 99999999999999999999999999999876653 23
Q ss_pred ceeecccCCccccCcccc---CCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccC
Q 005760 549 TIQTQTLATIGYMAPEYG---KEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 625 (678)
Q Consensus 549 ~~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (678)
.......||+.|||||+. +.+.|...+|||+.|+...|+-.-++|.-+..+.... +.. .....+|.-.
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l---~Lm------TkS~~qpp~l 237 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL---FLM------TKSGFQPPTL 237 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH---HHh------hccCCCCCcc
Confidence 345567899999999964 4667899999999999999998888774332221111 000 0001111111
Q ss_pred CccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 626 SREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 626 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
. .+..-++.+-++++.|+.++|++||+++.++.
T Consensus 238 k-------Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 238 K-------DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred c-------CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1 11123445778999999999999999988764
No 402
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-27 Score=237.92 Aligned_cols=132 Identities=27% Similarity=0.380 Sum_probs=111.8
Q ss_pred hcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCC-----C---ccceeeeeeee---
Q 005760 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR-----H---RNIIKVISSCS--- 458 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~--- 458 (678)
..+|-+.++||.|.|++||++. ..+.+.||+|+.+.. ..-.+....||.++++++ | ..||++++.|.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 3678899999999999999996 457889999998753 344567788999999984 3 35999999884
Q ss_pred -cCCeEEEEEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec
Q 005760 459 -NEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD 526 (678)
Q Consensus 459 -~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~ 526 (678)
.+.+.++|+|++ |.+|..++.... ..++...+..|++||+.||.|||+ +.||+|-||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeee
Confidence 467999999999 668988887553 368999999999999999999997 67999999999999983
No 403
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=3.4e-28 Score=230.92 Aligned_cols=256 Identities=25% Similarity=0.292 Sum_probs=193.1
Q ss_pred hcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeeccc--CchhhhHHHHHHHHHhCCCccceeeeeeeecC------C
Q 005760 391 TDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE------E 461 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 461 (678)
..+|.-.+.+|.|+- .|..|.+ -.+++||+|....+. ....++..+|...+..+.|+|+++++.+|.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777888999998 6666643 378999999985442 23346667899999999999999999998433 3
Q ss_pred eEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
..|+|||++. .+|...++. .++-.++..++.|++.|+.||| +.||+||||||+||++..++.+||.|||+|+.
T Consensus 95 e~y~v~e~m~-~nl~~vi~~---elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM---ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH---hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcc
Confidence 6689999994 499988873 3777888999999999999999 99999999999999999999999999999975
Q ss_pred cCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcc--cCCc----
Q 005760 542 LTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW--LPIS---- 615 (678)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~--~~~~---- 615 (678)
- +...+.+.++.+..|.|||++.+..+.+.+||||+||++.||++|+.-|.+ +..+.+|.+.. ....
T Consensus 168 e---~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g----~d~idQ~~ki~~~lgtpd~~F 240 (369)
T KOG0665|consen 168 E---DTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG----KDHIDQWNKIIEQLGTPDPSF 240 (369)
T ss_pred c---CcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC----chHHHHHHHHHHHhcCCCHHH
Confidence 3 233466778899999999999988899999999999999999999987653 33344443210 0000
Q ss_pred ----------------------ccccc-cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 616 ----------------------TKEIV-DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 616 ----------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..+.+ |...... .+. ..--...+.+++.+||..||++|.+++++++
T Consensus 241 ~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~--~e~--~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 241 MKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVV--LEG--SKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHhhHHHHHHhhcChHhhccchhhhCCccccccc--ccC--CccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00000 0000000 000 0112344789999999999999999999975
No 404
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=7.1e-30 Score=260.51 Aligned_cols=271 Identities=27% Similarity=0.362 Sum_probs=242.2
Q ss_pred CccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEE
Q 005760 1 MLQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLIS 80 (678)
Q Consensus 1 ~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~ 80 (678)
+||||+|++. ..|..+...+++-+|+|++|+|..+.-..|.+|+.|-.||||+|++..+|+. ...+.+|++|.
T Consensus 107 ~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ------~RRL~~LqtL~ 179 (1255)
T KOG0444|consen 107 ILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQ------IRRLSMLQTLK 179 (1255)
T ss_pred eeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHH------HHHHhhhhhhh
Confidence 5899999999 9999999999999999999999977778899999999999999999998865 68899999999
Q ss_pred CccCCCcccCChhhhhcccccccEEEccccccc-ccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCc
Q 005760 81 FSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVS-GGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNK 159 (678)
Q Consensus 81 L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 159 (678)
|++|++.-..-.. ...+. +|+.|.+++.+-+ ..+|.++..+.||..+|||.|.+. ..|+.+..+++|+.|+|++|+
T Consensus 180 Ls~NPL~hfQLrQ-LPsmt-sL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ 256 (1255)
T KOG0444|consen 180 LSNNPLNHFQLRQ-LPSMT-SLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNK 256 (1255)
T ss_pred cCCChhhHHHHhc-Cccch-hhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCc
Confidence 9999986332111 22233 7888999988766 567999999999999999999998 899999999999999999999
Q ss_pred CCCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccc--cccccccccccccEEEecCCcccCCCCc
Q 005760 160 LEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELT--SIPLTFWNLKDILYLNFSSNFFTGPLPL 237 (678)
Q Consensus 160 i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~~~~~ 237 (678)
|+ .+........+|++|+||+|+++ .+|+++.+++.|+.|++.+|+|+ .||..++++.+|+.+..++|.+. ..|+
T Consensus 257 it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPE 333 (1255)
T KOG0444|consen 257 IT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPE 333 (1255)
T ss_pred ee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCch
Confidence 99 66667777889999999999999 89999999999999999999988 79999999999999999999998 8888
Q ss_pred cccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCC
Q 005760 238 EIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPR 295 (678)
Q Consensus 238 ~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 295 (678)
.+..+. +|+.|.|+.|++- ..|+++.-++.|+.||+..||-.-.+|.
T Consensus 334 glcRC~----------kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 334 GLCRCV----------KLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred hhhhhH----------HHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 887666 9999999999998 7899999999999999999996645444
No 405
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=9.9e-27 Score=228.27 Aligned_cols=199 Identities=31% Similarity=0.455 Sum_probs=172.8
Q ss_pred CCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCc-hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 394 FSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGR-VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
|.+.+.||+|++|.||+|... +++.+|+|.+...... ..+.+..|++.++.++|+|++++++++...+..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 566789999999999999865 4899999999765444 56788899999999999999999999998899999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCccee
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQ 551 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 551 (678)
+++|.+++......+++..+..++.+++.++.+|| +.+++|+|++|.||+++.++.++++|||.+........ ...
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-ALL 156 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-ccc
Confidence 99999999876543788999999999999999999 88999999999999999999999999999987643321 122
Q ss_pred ecccCCccccCcccc-CCCCCCccchHHHHHHHHHHHHcCCCCCCc
Q 005760 552 TQTLATIGYMAPEYG-KEGRVSANGDVYSFGIMLMETFTRKKPTDE 596 (678)
Q Consensus 552 ~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGv~l~ell~g~~p~~~ 596 (678)
....++..|++||.. ....++.++|+|++|++++||++|+.||+.
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 334577889999988 666778899999999999999999999965
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=8e-28 Score=222.82 Aligned_cols=257 Identities=20% Similarity=0.299 Sum_probs=191.7
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeee-eeecCCeEEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVIS-SCSNEEFKAL 465 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~-~~~~~~~~~l 465 (678)
.-.+.|.+.+.+|+|.||.+-+++++ ..+.+++|.+..+. ...++|.+|...--.| .|.||+.-|+ .|+..+.+++
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 34567999999999999999999865 67889999986442 2457888888765555 4999998887 4688888999
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec--CCCcEEEEeeccccccC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD--DNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~--~~~~~kl~Dfg~~~~~~ 543 (678)
++||++.|+|.+-+...+ +.+.....++.|+++|+.|+| ++.+||||||.+|||+- +..+||+||||+++..+
T Consensus 100 ~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999999999887754 778888999999999999999 99999999999999983 34589999999987553
Q ss_pred CCCCcceeecccCCccccCccccCC---C--CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc
Q 005760 544 REDQSTIQTQTLATIGYMAPEYGKE---G--RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 618 (678)
Q Consensus 544 ~~~~~~~~~~~~~~~~y~aPE~~~~---~--~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (678)
.. ......+..|.|||.... + .+.+.+|+|.||+++|.++||+.||....-.+.....|.+ |.......
T Consensus 175 ~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~-w~~rk~~~ 248 (378)
T KOG1345|consen 175 TT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ-WLKRKNPA 248 (378)
T ss_pred ce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH-HhcccCcc
Confidence 21 122334567899996532 2 3567899999999999999999999754444444443332 11111110
Q ss_pred cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 005760 619 IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLK 669 (678)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~ 669 (678)
-|. .. ...++.+.++.++-+..+|++|-...++.++-..
T Consensus 249 --~P~----~F------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 249 --LPK----KF------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred --Cch----hh------cccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 011 11 1234557889999999999999666666655443
No 407
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=1.9e-27 Score=238.29 Aligned_cols=203 Identities=25% Similarity=0.305 Sum_probs=170.9
Q ss_pred HHhhcCCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccCchhhhHHHHHHHHHhCC------CccceeeeeeeecC
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR------HRNIIKVISSCSNE 460 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~ 460 (678)
+...++|.+....|+|-|++|.+|.. ..|..||||++..+. -..+.-..|+++|+.|+ --|.++++..|...
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk 506 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK 506 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence 34567898889999999999999974 467899999997542 22345567999999995 34789999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC-CcEEEEeec
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN-MVAHLSDFG 537 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~-~~~kl~Dfg 537 (678)
.++|+|+|-+ ..+|.+++.+.+. .+....+..++.|+.-||..|- ..+|+|.||||.|||+.+. ..+||||||
T Consensus 507 nHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfG 582 (752)
T KOG0670|consen 507 NHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFG 582 (752)
T ss_pred ceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCc
Confidence 9999999988 5599999987654 5778889999999999999999 9999999999999999865 467999999
Q ss_pred cccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccC
Q 005760 538 IAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFN 599 (678)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~ 599 (678)
.|-...... .+.+..+-.|.|||++.+-.|+...|+||.||+|||+.||+.-|++.++
T Consensus 583 SA~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 583 SASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred ccccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 997654332 3445567789999999999999999999999999999999998877443
No 408
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=9e-27 Score=229.80 Aligned_cols=269 Identities=24% Similarity=0.318 Sum_probs=198.3
Q ss_pred HHhhcCCCCCccccCCCceeEEEEEeC----CCcEEEEEEeecccCchhhhHHHHHHHHHhCC-CccceeeeeeeecCCe
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKARLG----DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEF 462 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 462 (678)
....+.|..+++||+|.|++||+|... .++.||+|.+..... ...+..|++++..+. +.||+++.+++...+.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 345567899999999999999999643 467899999865433 366889999999995 8999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec-CCCcEEEEeeccccc
Q 005760 463 KALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKL 541 (678)
Q Consensus 463 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~-~~~~~kl~Dfg~~~~ 541 (678)
..+|+||++.....++... ++...+..+++.+..||+++| ..|||||||||.|++.+ ..+.-.|.|||+|..
T Consensus 110 v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred eEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHH
Confidence 9999999999998888864 567888899999999999999 99999999999999997 567889999999972
Q ss_pred cCCCC------------------------------------------CcceeecccCCccccCccccCCC-CCCccchHH
Q 005760 542 LTRED------------------------------------------QSTIQTQTLATIGYMAPEYGKEG-RVSANGDVY 578 (678)
Q Consensus 542 ~~~~~------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvw 578 (678)
..... .........||++|.|||++.+. .-++++|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 21000 00112335699999999988765 468899999
Q ss_pred HHHHHHHHHHcCCCCCCcccCCccchhhhhhccc----------CCc--cc---------------cccc-CccCCccc-
Q 005760 579 SFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWL----------PIS--TK---------------EIVD-PNLLSRED- 629 (678)
Q Consensus 579 slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~----------~~~--~~---------------~~~~-~~~~~~~~- 629 (678)
|.||++.-++++..||......-..+.+.+..+. +.. .. +-++ ........
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~ 342 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP 342 (418)
T ss_pred eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence 9999999999999998654333223322221100 000 00 0000 00000000
Q ss_pred -hhhHHH-HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 630 -INFVAK-EQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 630 -~~~~~~-~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
...... +..+..+++++.+|+..||.+|.||+|+++
T Consensus 343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000011 123447899999999999999999999986
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=8.1e-27 Score=215.99 Aligned_cols=250 Identities=22% Similarity=0.361 Sum_probs=194.0
Q ss_pred CCCCccccCCCceeEEEEEeCCCcEEEEEEeecc--cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecC
Q 005760 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQ--YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMP 471 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 471 (678)
....-+|.+...|..|+|++ .|..+++|++... ......+|.+|.-.++-+.||||.++++.|..+..+.++..|++
T Consensus 192 lnl~tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 34456788999999999999 4677778887543 23455788999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcce
Q 005760 472 HGSLEKYLHSSNY-ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTI 550 (678)
Q Consensus 472 ~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 550 (678)
.|+|+..++.... ..+..+.++++.++|+|++|||+ ...-|.---+.+..+++|++.+++|+- +-+ ..+..
T Consensus 271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhs-lep~ipr~~lns~hvmidedltarism-ad~------kfsfq 342 (448)
T KOG0195|consen 271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHS-LEPMIPRFYLNSKHVMIDEDLTARISM-ADT------KFSFQ 342 (448)
T ss_pred chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhh-cchhhhhhhcccceEEecchhhhheec-ccc------eeeee
Confidence 9999999987654 46678899999999999999993 223344456889999999999988851 111 11222
Q ss_pred eecccCCccccCccccCCCCC---CccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCc
Q 005760 551 QTQTLATIGYMAPEYGKEGRV---SANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 627 (678)
Q Consensus 551 ~~~~~~~~~y~aPE~~~~~~~---~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (678)
.....-.+.|++||.++..+. -.++|+|||++++||+-|+..||.+..+.+...+.....
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg----------------- 405 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG----------------- 405 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc-----------------
Confidence 234456789999999987764 356899999999999999999999876665544322211
Q ss_pred cchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 628 EDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 628 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
.+-..+...+..+.++|.-|++.||.+||.+..++-.||++.
T Consensus 406 --lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 406 --LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred --ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 111122345566889999999999999999999999999874
No 410
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=2.2e-25 Score=209.92 Aligned_cols=171 Identities=22% Similarity=0.217 Sum_probs=131.3
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|+|.++++..+..+++..++.++.|++.||+||| +.+ ||+||+++.++.+|+ ||.+......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc-------
Confidence 6899999876667999999999999999999999 666 999999999999999 9998765322
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
...+++.|+|||++.+..++.++|||||||++|||++|+.||............+.....+.. +.. .
T Consensus 63 ~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~-------~ 129 (176)
T smart00750 63 QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD------PRD-------R 129 (176)
T ss_pred cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC------ccc-------c
Confidence 125889999999999999999999999999999999999998654332222222222111100 000 0
Q ss_pred HHHHHHH--HHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHH
Q 005760 633 VAKEQCV--SFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSL 674 (678)
Q Consensus 633 ~~~~~~~--~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~ 674 (678)
....... .++.+++.+||+.+|++||++.|+++.+..+..+-
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~ 173 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET 173 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 0011222 26899999999999999999999999998876553
No 411
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.93 E-value=3.1e-28 Score=237.13 Aligned_cols=294 Identities=29% Similarity=0.443 Sum_probs=189.7
Q ss_pred ccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchh----------------
Q 005760 2 LQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELS---------------- 65 (678)
Q Consensus 2 L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~---------------- 65 (678)
|+..+|+++ ++|..++++..+..|++.+|+++...|+.+. ++.|++||...|.++.+|.+++
T Consensus 142 l~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~ 219 (565)
T KOG0472|consen 142 LDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR 219 (565)
T ss_pred hhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc
Confidence 344455555 4555555555555555555555533222222 5555555555555554444321
Q ss_pred hcccccCCCCCcEEECccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhh
Q 005760 66 FLSSLSNCKSLTLISFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLG 145 (678)
Q Consensus 66 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 145 (678)
..+.|.+|..|..|+++.|+|. ..|.....++. +|..|||++|+++ ..|+.+.-+.+|++||+|+|.|+ ..|..++
T Consensus 220 ~lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L~-~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLg 295 (565)
T KOG0472|consen 220 FLPEFPGCSLLKELHVGENQIE-MLPAEHLKHLN-SLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLG 295 (565)
T ss_pred cCCCCCccHHHHHHHhcccHHH-hhHHHHhcccc-cceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccc
Confidence 1124666777777777777774 55555455666 7778888888877 56777777788888888888877 5666777
Q ss_pred ccCCCCEEEccCCcCCC---------------------------------------------------------------
Q 005760 146 KLQKLQGLGLENNKLEG--------------------------------------------------------------- 162 (678)
Q Consensus 146 ~l~~L~~L~L~~n~i~~--------------------------------------------------------------- 162 (678)
++ .|+.|.+.+|.+..
T Consensus 296 nl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~ql 374 (565)
T KOG0472|consen 296 NL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQL 374 (565)
T ss_pred cc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccccc
Confidence 77 77777777777531
Q ss_pred -CCCCcccCCCC---ccEEecCCCcCC-----------------------CCChhhhhccccccceeccccccccccccc
Q 005760 163 -SIPDSICHSDE---LYKLELGGNKLS-----------------------GSIPECFNNLASLRILLLGSNELTSIPLTF 215 (678)
Q Consensus 163 -~~~~~~~~l~~---L~~L~l~~N~i~-----------------------~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~ 215 (678)
.+|+..+.... ....+++.|++. +..|..++.+++|+.|+|++|.+..+|..+
T Consensus 375 t~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~ 454 (565)
T KOG0472|consen 375 TLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEEM 454 (565)
T ss_pred ccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhcchhh
Confidence 01111111001 223334444443 133344455667777777777777777777
Q ss_pred cccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCC
Q 005760 216 WNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPR 295 (678)
Q Consensus 216 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 295 (678)
..+-.|+.|++|.|++. ..|.....+. .|+.+-.++|++..+.++.+..|.+|++||+.+|.+...+|.
T Consensus 455 ~~lv~Lq~LnlS~NrFr-~lP~~~y~lq----------~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~ 523 (565)
T KOG0472|consen 455 GSLVRLQTLNLSFNRFR-MLPECLYELQ----------TLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI 523 (565)
T ss_pred hhhhhhheecccccccc-cchHHHhhHH----------HHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChh
Confidence 77777777777777776 5666655555 566666677888877778789999999999999999999999
Q ss_pred CCccccccccccccCccc
Q 005760 296 GGSFGNFSAESFEGNELL 313 (678)
Q Consensus 296 ~~~~~~l~~~~~~~n~~~ 313 (678)
.+.+.++..+.+.|||+.
T Consensus 524 LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 524 LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hccccceeEEEecCCccC
Confidence 999999999999999986
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-27 Score=232.57 Aligned_cols=297 Identities=21% Similarity=0.223 Sum_probs=227.4
Q ss_pred cCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECcc-
Q 005760 5 WENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSN- 83 (678)
Q Consensus 5 ~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~- 83 (678)
++-+++ .+|..+.. .-++++|..|+|+.+.+++|+.+++|+.|||++|.|+.+.+. +|.++++|..|-+-+
T Consensus 54 r~~GL~-eVP~~LP~--~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~-----AF~GL~~l~~Lvlyg~ 125 (498)
T KOG4237|consen 54 RGKGLT-EVPANLPP--ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPD-----AFKGLASLLSLVLYGN 125 (498)
T ss_pred cCCCcc-cCcccCCC--cceEEEeccCCcccCChhhccchhhhceecccccchhhcChH-----hhhhhHhhhHHHhhcC
Confidence 344455 66755443 678999999999988889999999999999999999988865 689999888877666
Q ss_pred CCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCC--
Q 005760 84 NPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLE-- 161 (678)
Q Consensus 84 n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~-- 161 (678)
|+|+.+ |...|+.|. +|+.|.++-|++.....+.|..+++|..|.+.+|.+..+.-++|.++.+++++.+..|.+-
T Consensus 126 NkI~~l-~k~~F~gL~-slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icd 203 (498)
T KOG4237|consen 126 NKITDL-PKGAFGGLS-SLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICD 203 (498)
T ss_pred Cchhhh-hhhHhhhHH-HHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccc
Confidence 888755 445588887 8999999999999888899999999999999999998555558999999999999998832
Q ss_pred ----------CCCCCcccCCCCccEEecCCCcCCCCChhhhhcc-ccc-cceeccccccccccc-cccccccccEEEecC
Q 005760 162 ----------GSIPDSICHSDELYKLELGGNKLSGSIPECFNNL-ASL-RILLLGSNELTSIPL-TFWNLKDILYLNFSS 228 (678)
Q Consensus 162 ----------~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l-~~L-~~L~l~~N~l~~l~~-~~~~l~~L~~L~l~~ 228 (678)
...|-.++...-..-..|.++++..+.+..|... +++ ..+....+....-|. .|.++++|+.|+|++
T Consensus 204 CnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsn 283 (498)
T KOG4237|consen 204 CNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSN 283 (498)
T ss_pred cccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCC
Confidence 2334444444445555566666665555555422 222 223333334444455 688899999999999
Q ss_pred CcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCC-Ccccccccccc
Q 005760 229 NFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRG-GSFGNFSAESF 307 (678)
Q Consensus 229 N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~-~~~~~l~~~~~ 307 (678)
|+|+.+-+..|.++. .++.|.|..|+|..+....|.++..|+.|+|.+|++++..|.. .....+.++.+
T Consensus 284 N~i~~i~~~aFe~~a----------~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l 353 (498)
T KOG4237|consen 284 NKITRIEDGAFEGAA----------ELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNL 353 (498)
T ss_pred Cccchhhhhhhcchh----------hhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeeh
Confidence 999988888888877 8999999999998888888889999999999999999877664 55566778888
Q ss_pred ccCccccCCCCCCC
Q 005760 308 EGNELLCGSPNLRV 321 (678)
Q Consensus 308 ~~n~~~c~~~~~~~ 321 (678)
.+|||.|+|-..|.
T Consensus 354 ~~Np~~CnC~l~wl 367 (498)
T KOG4237|consen 354 LSNPFNCNCRLAWL 367 (498)
T ss_pred ccCcccCccchHHH
Confidence 89999999886664
No 413
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.8e-25 Score=258.54 Aligned_cols=195 Identities=15% Similarity=0.234 Sum_probs=138.2
Q ss_pred CCC-ccceeeeeee-------ecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEc
Q 005760 445 IRH-RNIIKVISSC-------SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHC 516 (678)
Q Consensus 445 l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 516 (678)
++| +||++++++| .+.+..+.++||+ +++|.+++......+++.+++.++.||++||+||| +++|+||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~gIvHr 104 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH---SQGIVVH 104 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 455 6888888877 2334567888987 55999999865556899999999999999999999 9999999
Q ss_pred CCCCCCeeecCCCc-------------------EEEEeeccccccCCCC--------------CcceeecccCCccccCc
Q 005760 517 DLKPSNVLLDDNMV-------------------AHLSDFGIAKLLTRED--------------QSTIQTQTLATIGYMAP 563 (678)
Q Consensus 517 dl~~~Nill~~~~~-------------------~kl~Dfg~~~~~~~~~--------------~~~~~~~~~~~~~y~aP 563 (678)
||||+|||++..+. +|++|||+++...... .........+|+.|+||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999965444 4555555554221000 00011124578899999
Q ss_pred cccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHH
Q 005760 564 EYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVF 643 (678)
Q Consensus 564 E~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 643 (678)
|++.+..++.++|||||||++|||++|..|+..... ......... ..+.. ....++..
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~~--------~~~~~-----------~~~~~~~~ 242 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHRV--------LPPQI-----------LLNWPKEA 242 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHhh--------cChhh-----------hhcCHHHH
Confidence 999999999999999999999999998888643111 111110000 00000 01123356
Q ss_pred HHHhhccccCcCCCCCHHHHHH
Q 005760 644 NVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 644 ~l~~~cl~~dP~~Rps~~ell~ 665 (678)
+++.+||+++|.+||++.|+++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhh
Confidence 7888999999999999999975
No 414
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=2.1e-27 Score=231.40 Aligned_cols=265 Identities=28% Similarity=0.400 Sum_probs=171.7
Q ss_pred CCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCChhhhhccccc
Q 005760 22 KLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILPKTSVGNLSHS 101 (678)
Q Consensus 22 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~~~ 101 (678)
.++.|.+++|.+. .+.+.+.++..|..|++++|++...++. +..+..++.++.++|+++ ..|.. +..+. +
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~~lp~a------ig~l~~l~~l~vs~n~ls-~lp~~-i~s~~-~ 115 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLSQLPAA------IGELEALKSLNVSHNKLS-ELPEQ-IGSLI-S 115 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhhhCCHH------HHHHHHHHHhhcccchHh-hccHH-Hhhhh-h
Confidence 3555555555555 3334445555555555555555555432 344455555555555554 22333 33333 4
Q ss_pred ccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCC
Q 005760 102 LEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGG 181 (678)
Q Consensus 102 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 181 (678)
+..|+.++|.+. .+|+.++.+-.|+.|+..+|+++ ..|+.+..+.+|..|++.+|.++.. |...-.|..|+.||+.+
T Consensus 116 l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~ 192 (565)
T KOG0472|consen 116 LVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNS 192 (565)
T ss_pred hhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccch
Confidence 555666666655 34555666777777777777776 5667777777777777777777733 33343477777777777
Q ss_pred CcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEcc
Q 005760 182 NKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLS 261 (678)
Q Consensus 182 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~ 261 (678)
|.++ .+|..++.+.+|..|+|..|+|..+| .|.+++.|++|+++.|.|.-...+...++. +|..|||.
T Consensus 193 N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~----------~l~vLDLR 260 (565)
T KOG0472|consen 193 NLLE-TLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLN----------SLLVLDLR 260 (565)
T ss_pred hhhh-cCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHHhhHHHHhcccc----------cceeeecc
Confidence 7777 66666777777777777777777777 677777777777777777733333333444 77777888
Q ss_pred CCcCCCcchHHHhcccCCCceecccccccccCCCCCccccccccccccCccc
Q 005760 262 NNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELL 313 (678)
Q Consensus 262 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~l~~~~~~~n~~~ 313 (678)
+|+++ ..|+.+..+.+|.+||+++|.+++.++..+.+ .+..+.+.|||..
T Consensus 261 dNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 261 DNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred ccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchH
Confidence 88777 66777777777778888888887777777776 7777777777753
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=3.2e-27 Score=229.89 Aligned_cols=298 Identities=21% Similarity=0.238 Sum_probs=247.8
Q ss_pred ccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccC-ccCCCCccchhhcccccCCCCCcEEE
Q 005760 2 LQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSN-NYLTSSTLELSFLSSLSNCKSLTLIS 80 (678)
Q Consensus 2 L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~~~~~~l~~L~~L~ 80 (678)
|+|..|+|+...|.+|+.+++|+.|||++|+|+.+-|++|..+++|.+|-+-+ |+|++++.+ .|.++.+|+.|.
T Consensus 72 irLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~-----~F~gL~slqrLl 146 (498)
T KOG4237|consen 72 IRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKG-----AFGGLSSLQRLL 146 (498)
T ss_pred EEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhh-----HhhhHHHHHHHh
Confidence 78999999966668899999999999999999999999999999999997766 999999987 599999999999
Q ss_pred CccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCcc------------CCcCChhhhccC
Q 005760 81 FSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKL------------NGSIPSTLGKLQ 148 (678)
Q Consensus 81 L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l------------~~~~~~~~~~l~ 148 (678)
+.-|++.-+.... +.+++ +|..|.+.+|.+..+-..+|..+.+++.+.+..|.+ ....|..++++.
T Consensus 147 lNan~i~Cir~~a-l~dL~-~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgar 224 (498)
T KOG4237|consen 147 LNANHINCIRQDA-LRDLP-SLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGAR 224 (498)
T ss_pred cChhhhcchhHHH-HHHhh-hcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccce
Confidence 9999998665555 88888 899999999999977667899999999999999983 223455666677
Q ss_pred CCCEEEccCCcCCCCCCCcccCC-CCccEEecCCCcCCCCCh-hhhhccccccceeccccccccccc-cccccccccEEE
Q 005760 149 KLQGLGLENNKLEGSIPDSICHS-DELYKLELGGNKLSGSIP-ECFNNLASLRILLLGSNELTSIPL-TFWNLKDILYLN 225 (678)
Q Consensus 149 ~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~l~~-~~~~l~~L~~L~ 225 (678)
-..-..+.++++...-+..|... .++..=..+.+...+..| ..|..+++|+.|+|++|+|+.+.+ +|.++..+++|.
T Consensus 225 c~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~ 304 (498)
T KOG4237|consen 225 CVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELY 304 (498)
T ss_pred ecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhh
Confidence 77777888888875555555432 222222223333333444 578999999999999999999965 799999999999
Q ss_pred ecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCCCcccccccc
Q 005760 226 FSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAE 305 (678)
Q Consensus 226 l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~l~~~ 305 (678)
|..|+|.......|.++. +|+.|+|.+|+|+...|.+|..+..|.+|++-.|||.|.|.-.|...|+..-
T Consensus 305 L~~N~l~~v~~~~f~~ls----------~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~ 374 (498)
T KOG4237|consen 305 LTRNKLEFVSSGMFQGLS----------GLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKK 374 (498)
T ss_pred cCcchHHHHHHHhhhccc----------cceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhC
Confidence 999999988888888888 9999999999999999999999999999999999999999998888888877
Q ss_pred ccccCccccCCC
Q 005760 306 SFEGNELLCGSP 317 (678)
Q Consensus 306 ~~~~n~~~c~~~ 317 (678)
...||| .|..|
T Consensus 375 ~~~~~~-~Cq~p 385 (498)
T KOG4237|consen 375 SVVGNP-RCQSP 385 (498)
T ss_pred CCCCCC-CCCCC
Confidence 755554 45555
No 416
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=3.8e-23 Score=228.81 Aligned_cols=256 Identities=26% Similarity=0.290 Sum_probs=192.2
Q ss_pred CccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEE
Q 005760 1 MLQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLIS 80 (678)
Q Consensus 1 ~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~ 80 (678)
.|+|+.|+++ .+|..+.. +|+.|++++|+|+. +|. .+++|++|+|++|+|+.++.. .++|+.|+
T Consensus 205 ~LdLs~~~Lt-sLP~~l~~--~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsLP~l---------p~sL~~L~ 268 (788)
T PRK15387 205 VLNVGESGLT-TLPDCLPA--HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPVL---------PPGLLELS 268 (788)
T ss_pred EEEcCCCCCC-cCCcchhc--CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcccCc---------ccccceee
Confidence 3789999998 78987764 89999999999995 554 368999999999999988632 36889999
Q ss_pred CccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcC
Q 005760 81 FSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKL 160 (678)
Q Consensus 81 L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i 160 (678)
+++|.+..+. .++.+|+.|++++|+++.. |. .+++|+.|+|++|++++ +|.. ..+|+.|++++|.|
T Consensus 269 Ls~N~L~~Lp------~lp~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L 334 (788)
T PRK15387 269 IFSNPLTHLP------ALPSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQL 334 (788)
T ss_pred ccCCchhhhh------hchhhcCEEECcCCccccc-cc---cccccceeECCCCcccc-CCCC---cccccccccccCcc
Confidence 9999987432 2334789999999999854 43 25789999999999985 4442 24688888999999
Q ss_pred CCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCcccc
Q 005760 161 EGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIG 240 (678)
Q Consensus 161 ~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 240 (678)
+ .+|.. ..+|+.|+|++|+|+. +|.. .++|+.|++++|+|+.+|... .+|+.|++++|+|++ +|...
T Consensus 335 ~-~LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~LP~l~---~~L~~LdLs~N~Lt~-LP~l~- 401 (788)
T PRK15387 335 T-SLPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPALP---SGLKELIVSGNRLTS-LPVLP- 401 (788)
T ss_pred c-ccccc---ccccceEecCCCccCC-CCCC---CcccceehhhccccccCcccc---cccceEEecCCcccC-CCCcc-
Confidence 8 45542 2478899999999984 4442 257888889999988887543 468889999998884 33321
Q ss_pred ccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCCCccccccccccccCccccC
Q 005760 241 NLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCG 315 (678)
Q Consensus 241 ~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~l~~~~~~~n~~~c~ 315 (678)
. +|+.|++++|+|++ +|.. ..+|+.|++++|+++..+.....+..+..+++.+|++...
T Consensus 402 --s----------~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 402 --S----------ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred --c----------CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCch
Confidence 2 68888888888875 4433 2457778888888886555556677788888888887644
No 417
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=3.3e-23 Score=212.58 Aligned_cols=168 Identities=20% Similarity=0.188 Sum_probs=130.5
Q ss_pred HHhhcCCCCCccccCCCceeEEEEEeC--CCcEEEEEEeeccc-----CchhhhHHHHHHHHHhCCCccceeeeeeeecC
Q 005760 388 CRATDGFSENNLIGRGSFGSVFKARLG--DGMEVAMKVFNLQY-----GRVFKSFDVECEMMKSIRHRNIIKVISSCSNE 460 (678)
Q Consensus 388 ~~~~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 460 (678)
....++|++.+.||+|+||+||+|..+ +++.||||+..... ....+.+.+|+++++.++|+|+++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345678999999999999999999754 57888999865321 12345688999999999999998533222
Q ss_pred CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCC-CCCCeeecCCCcEEEEeeccc
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL-KPSNVLLDDNMVAHLSDFGIA 539 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-~~~Nill~~~~~~kl~Dfg~~ 539 (678)
+..++||||+++++|... ... . ...++.|++++|+||| ++||+|||| ||+||+++.++.+||+|||+|
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 457999999999999632 111 1 1467889999999999 999999999 999999999999999999999
Q ss_pred cccCCCCCcce------eecccCCccccCccccCCC
Q 005760 540 KLLTREDQSTI------QTQTLATIGYMAPEYGKEG 569 (678)
Q Consensus 540 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~ 569 (678)
+.+........ .....+++.|+|||++...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 87754432211 1345678889999987654
No 418
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=7.9e-22 Score=203.70 Aligned_cols=261 Identities=21% Similarity=0.238 Sum_probs=197.3
Q ss_pred CCCCCccccCCCceeEEEEEeCC--CcEEEEEEeecccCchhhhHHHHHHHHHhCCC----ccceeeeeee-ecCCeEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLGD--GMEVAMKVFNLQYGRVFKSFDVECEMMKSIRH----RNIIKVISSC-SNEEFKAL 465 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~~l 465 (678)
+|.+.+.||+|+||.||.|.... ...+|+|+...........+..|..++..+.. +++..+++.. ..++..++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 89999999999999999998644 35789998765433333377889999998873 5888999888 57778899
Q ss_pred EEEecCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC-----CcEEEEeeccc
Q 005760 466 VLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN-----MVAHLSDFGIA 539 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~-----~~~kl~Dfg~~ 539 (678)
||+.+ |.+|.++..... ..++..++..++.|++.+|.++| +.|++||||||.|+++... ..+.+.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 779999886554 67999999999999999999999 9999999999999999854 46999999999
Q ss_pred c--ccCCCCCc----c-e-eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcc
Q 005760 540 K--LLTREDQS----T-I-QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDW 611 (678)
Q Consensus 540 ~--~~~~~~~~----~-~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~ 611 (678)
+ .+...... . . .....||..|.++....+...+.+.|+||++.++.|+..|..||........ ........
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~ 253 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDP 253 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHh
Confidence 8 33222211 1 1 2345699999999999999999999999999999999999999965333211 11111100
Q ss_pred cCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 612 LPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.. ..... .....+.++.+++..+-..+..++|....+.+.++.....
T Consensus 254 ~~----~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RK----LLTDR-----------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hh----hcccc-----------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 00 00000 0011234566677777778999999999999998776543
No 419
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=7.8e-23 Score=223.88 Aligned_cols=254 Identities=20% Similarity=0.228 Sum_probs=186.5
Q ss_pred CCCccccCCCceeEEEEE-eCCCcEEEEEEeec----c-cCch-hhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 395 SENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNL----Q-YGRV-FKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 395 ~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~----~-~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
...+.+|.|++|.|+.+. .......+.|.+.. . .... ...+..|+.+-..+.|||++..+..+.+....+-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456789999999888775 33344444444321 1 1111 122556777778889999988888777766666669
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ 547 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 547 (678)
||+++ +|..++.... ++....+-.++.|++.|+.|+| ..|+.|||+|++|++++.+|.+||+|||.+..+.-...
T Consensus 401 E~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 99999 9999998763 4777788889999999999999 99999999999999999999999999999976654333
Q ss_pred c--ceeecccCCccccCccccCCCCCCcc-chHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCcc
Q 005760 548 S--TIQTQTLATIGYMAPEYGKEGRVSAN-GDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 624 (678)
Q Consensus 548 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (678)
. .......|+..|+|||++.+..|.+. .||||.|++++.|.+|+.||-.....+....+ .... ..
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~~~---------~~ 543 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NNYS---------DQ 543 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---hccc---------cc
Confidence 3 55677889999999999999998765 89999999999999999998653332221100 0000 00
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 625 LSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 625 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
..............+.+...++.+|++.||.+|.|+.+|++
T Consensus 544 ~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 544 RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00000011111345666788999999999999999999975
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=4.5e-21 Score=183.24 Aligned_cols=265 Identities=19% Similarity=0.196 Sum_probs=207.1
Q ss_pred hcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 468 (678)
.-.|+++++||+|.||+++.|+ .-++++||||.-... ....++..|.+..+.|. .+.|..++.+.+++.+-.+|+|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 3479999999999999999997 458999999986432 34467788999999885 7899999988888888889999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-----CCcEEEEeeccccccC
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-----NMVAHLSDFGIAKLLT 543 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-----~~~~kl~Dfg~~~~~~ 543 (678)
.+ |-+|.|++.-.+..++..++.-+|.|++.-++|+| ++..|.|||||+|+||.. ...+.++|||+|+.+.
T Consensus 105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 98 77999999888888999999999999999999999 999999999999999963 3358999999999887
Q ss_pred CCCCc-----ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc
Q 005760 544 REDQS-----TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 618 (678)
Q Consensus 544 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (678)
+..+. .......||..||+-....+.+-+.+-|+=|+|=++++.+.|..||.+...+.. ++... .
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn--K~kYe--------K 250 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN--KEKYE--------K 250 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch--HHHHH--------H
Confidence 65432 223445699999999999999999999999999999999999999987433311 11110 0
Q ss_pred cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHHH
Q 005760 619 IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDSL 674 (678)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~~ 674 (678)
+-+.... .+.+- --++.+.++..-+...-..+=++-|..+-+.+-+..+.+.+
T Consensus 251 IGe~Kr~--T~i~~-Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 251 IGETKRS--TPIEV-LCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred hcccccc--CCHHH-HHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 1111100 00111 11346677778888777888888898888777777776654
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=5.2e-22 Score=219.76 Aligned_cols=237 Identities=29% Similarity=0.392 Sum_probs=190.8
Q ss_pred ccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEEC
Q 005760 2 LQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISF 81 (678)
Q Consensus 2 L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L 81 (678)
|++++|+++ .+|. ..++|++|+|++|+|+. +|.. .++|+.|+|++|.+..++.. ..+|+.|++
T Consensus 227 L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~~Lp~l---------p~~L~~L~L 289 (788)
T PRK15387 227 LVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLTHLPAL---------PSGLCKLWI 289 (788)
T ss_pred EEccCCcCC-CCCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchhhhhhc---------hhhcCEEEC
Confidence 688999998 6775 25789999999999995 4543 47899999999999877632 257899999
Q ss_pred ccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCC
Q 005760 82 SNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLE 161 (678)
Q Consensus 82 ~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~ 161 (678)
++|+++.+ |. .+++|++|+|++|+++++ |.. ..+|+.|++++|++++ +|.. ..+|++|+|++|+|+
T Consensus 290 s~N~Lt~L-P~-----~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls 355 (788)
T PRK15387 290 FGNQLTSL-PV-----LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLA 355 (788)
T ss_pred cCCccccc-cc-----cccccceeECCCCccccC-CCC---cccccccccccCcccc-cccc---ccccceEecCCCccC
Confidence 99999854 22 234899999999999964 432 3568899999999984 5532 258999999999999
Q ss_pred CCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccc
Q 005760 162 GSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGN 241 (678)
Q Consensus 162 ~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 241 (678)
.+|.. .++|+.|++++|.|+. +|.. .++|+.|+|++|+|+.+|... ++|+.|++++|++++ +|..+
T Consensus 356 -~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~LP~l~---s~L~~LdLS~N~Lss-IP~l~-- 421 (788)
T PRK15387 356 -SLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSLPVLP---SELKELMVSGNRLTS-LPMLP-- 421 (788)
T ss_pred -CCCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccCCCCcc---cCCCEEEccCCcCCC-CCcch--
Confidence 56653 3578999999999994 5543 357999999999999988643 589999999999985 44322
Q ss_pred cccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCC
Q 005760 242 LKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPR 295 (678)
Q Consensus 242 l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 295 (678)
. +|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.
T Consensus 422 -~----------~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 422 -S----------GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred -h----------hhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 2 7889999999998 6788899999999999999999976554
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=3.2e-22 Score=223.00 Aligned_cols=242 Identities=25% Similarity=0.401 Sum_probs=139.9
Q ss_pred ccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEEC
Q 005760 2 LQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISF 81 (678)
Q Consensus 2 L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L 81 (678)
|++++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|++++|++++++.. + ..+|+.|+|
T Consensus 183 L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~LtsLP~~------l--~~~L~~L~L 248 (754)
T PRK15370 183 LRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTSIPAT------L--PDTIQEMEL 248 (754)
T ss_pred EEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccccCChh------h--hccccEEEC
Confidence 556666666 5565443 36677777777776 3444333 3677777777776665532 1 135677777
Q ss_pred ccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCC
Q 005760 82 SNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLE 161 (678)
Q Consensus 82 ~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~ 161 (678)
++|++..+ |.. ++.+|++|++++|++.. +|..+. ++|+.|++++|+|++ +|..+. ++|+.|++++|.++
T Consensus 249 s~N~L~~L-P~~----l~s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt 317 (754)
T PRK15370 249 SINRITEL-PER----LPSALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT 317 (754)
T ss_pred cCCccCcC-Chh----HhCCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc
Confidence 77776533 322 22356677777776663 344432 466777777777663 444332 35666777777776
Q ss_pred CCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccc
Q 005760 162 GSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGN 241 (678)
Q Consensus 162 ~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 241 (678)
.+|..+. ++|+.|++++|.++. +|..+. ++|+.|++++|+|+.+|..+. ++|+.|++++|+++. +|..+.
T Consensus 318 -~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~- 387 (754)
T PRK15370 318 -ALPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTN-LPENLP- 387 (754)
T ss_pred -cCCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCCC-CCHhHH-
Confidence 3443332 466777777777663 444442 567777777777766665443 466777777776663 333322
Q ss_pred cccccccccCcccccEEEccCCcCCCcchHH----HhcccCCCceeccccccc
Q 005760 242 LKIARIDSCDLISLISLNLSNNNLSGAIPAS----LEKLSYLKDLNLSFNKLE 290 (678)
Q Consensus 242 l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~l~~N~~~ 290 (678)
. +|+.|++++|+|+. +|.. +..++.+..|++.+|+++
T Consensus 388 -~----------sL~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 -A----------ALQIMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -H----------HHHHHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCcc
Confidence 1 56667777777663 3332 233456666777777765
No 423
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.87 E-value=1.3e-23 Score=224.93 Aligned_cols=293 Identities=30% Similarity=0.410 Sum_probs=189.4
Q ss_pred ccccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhc--------------
Q 005760 2 LQMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFL-------------- 67 (678)
Q Consensus 2 L~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~-------------- 67 (678)
|++++|.|. ..|.+.+.+.+|++|+|.+|.+. .+|..+..+++|+.|+++.|++..+|..+...
T Consensus 73 ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~ 150 (1081)
T KOG0618|consen 73 LNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKI 150 (1081)
T ss_pred cccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhh
Confidence 566677776 67777777888888888888877 67888888888888888888887777533100
Q ss_pred -----------------------c-------------------cccCCCCCcEEECccCCCcccCC--------------
Q 005760 68 -----------------------S-------------------SLSNCKSLTLISFSNNPLDGILP-------------- 91 (678)
Q Consensus 68 -----------------------~-------------------~~~~l~~L~~L~L~~n~i~~~~~-------------- 91 (678)
. .++.+.+|+.|....|++....-
T Consensus 151 ~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~ 230 (1081)
T KOG0618|consen 151 QRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNP 230 (1081)
T ss_pred hhhccccchhhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCc
Confidence 0 01122222222222222211100
Q ss_pred --hhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCccc
Q 005760 92 --KTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSIC 169 (678)
Q Consensus 92 --~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~ 169 (678)
.......+.+|+++++++|+++.. |+++..+.+|+.|+...|++. ..|..+....+|+.|.+..|.+. .+|....
T Consensus 231 l~~~~~~p~p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le 307 (1081)
T KOG0618|consen 231 LTTLDVHPVPLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLE 307 (1081)
T ss_pred ceeeccccccccceeeecchhhhhcc-hHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCccc
Confidence 001112234678888888888744 588888888888888888876 45544444444444444444444 3444444
Q ss_pred CCCCccEEecCCCcCC-------------------------------------------------CCChhhhhccccccc
Q 005760 170 HSDELYKLELGGNKLS-------------------------------------------------GSIPECFNNLASLRI 200 (678)
Q Consensus 170 ~l~~L~~L~l~~N~i~-------------------------------------------------~~~~~~~~~l~~L~~ 200 (678)
++.+|++|+|..|+|. +..-..+.+...|+.
T Consensus 308 ~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKV 387 (1081)
T KOG0618|consen 308 GLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKV 387 (1081)
T ss_pred ccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceee
Confidence 4555555555554444 333334445577888
Q ss_pred eeccccccccccc-cccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcccCC
Q 005760 201 LLLGSNELTSIPL-TFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYL 279 (678)
Q Consensus 201 L~l~~N~l~~l~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 279 (678)
|+|++|+|+++|. .+.+++.|++|+||||+++ .+|.....+. .|++|...+|+|. ..| .+.+++.|
T Consensus 388 LhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~----------~L~tL~ahsN~l~-~fP-e~~~l~qL 454 (1081)
T KOG0618|consen 388 LHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLG----------RLHTLRAHSNQLL-SFP-ELAQLPQL 454 (1081)
T ss_pred eeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhh----------hhHHHhhcCCcee-ech-hhhhcCcc
Confidence 8888888888877 5778888888888888887 5566666666 7888888888877 566 67788888
Q ss_pred Cceeccccccccc-CCCCCccccccccccccCcc
Q 005760 280 KDLNLSFNKLEGE-IPRGGSFGNFSAESFEGNEL 312 (678)
Q Consensus 280 ~~L~l~~N~~~~~-~~~~~~~~~l~~~~~~~n~~ 312 (678)
+.+|++.|+++-. .+....+++|+-+++.||.|
T Consensus 455 ~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 455 KVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred eEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 8888888888754 34445557888889999885
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.6e-21 Score=178.22 Aligned_cols=264 Identities=18% Similarity=0.189 Sum_probs=200.4
Q ss_pred hhcCCCCCccccCCCceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCC-ccceeeeeeeecCCeEEEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRH-RNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~ 467 (678)
..++|.++++||+|+||.+|.|. ..+|++||+|+-+....+ .+...|..+.+.+++ ..|..+..+..+...-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 45789999999999999999996 678999999997655443 567789999999974 56777788888888889999
Q ss_pred EecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec---CCCcEEEEeeccccccCC
Q 005760 468 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTR 544 (678)
Q Consensus 468 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~---~~~~~kl~Dfg~~~~~~~ 544 (678)
+.+ |.+|.+++.-....+++.++.-.+-|++.-++|+| .++++||||||+|+++. ....+.++|||+|+.+.+
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 998 77999999877777999999999999999999999 99999999999999996 345688999999988754
Q ss_pred CCC-----cceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCccccc
Q 005760 545 EDQ-----STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI 619 (678)
Q Consensus 545 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (678)
..+ ........||..|.+-....+..-+.+-|+=|+|.+|...-.|..||.+.....-. ..+-+ ..+..+..
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~-QKyEk-I~EkK~s~- 243 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKK-QKYEK-ISEKKMST- 243 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHH-HHHHH-HHHhhcCC-
Confidence 332 22234456999999888777777788899999999999999999999875443211 11100 00000000
Q ss_pred ccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHH
Q 005760 620 VDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRD 672 (678)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~ 672 (678)
..+. --...|.++.-.+..|-..-=++-|...-+.+.+.-+..
T Consensus 244 ---------~ie~-LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 244 ---------PIEV-LCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred ---------CHHH-HhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 0000 012456677778888888888888887777666665543
No 425
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=1.8e-20 Score=195.57 Aligned_cols=258 Identities=31% Similarity=0.431 Sum_probs=197.6
Q ss_pred CCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCc---hhhhHHHHHHHHHhCCCc-cceeeeeeeecCCeEEEEEEe
Q 005760 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR---VFKSFDVECEMMKSIRHR-NIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 469 (678)
|...+.||.|+||.||++... ..+++|.+...... ....+.+|+..++.+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999876 78999998655332 367789999999999988 799999999877778999999
Q ss_pred cCCCCHHHHhhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC-cEEEEeeccccccCCCC
Q 005760 470 MPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTRED 546 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~-~~kl~Dfg~~~~~~~~~ 546 (678)
+.++++.+++..... .........++.|++.++.|+| ..+++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977776542 5888899999999999999999 99999999999999999988 79999999997654333
Q ss_pred Ccc----eeecccCCccccCccccCC---CCCCccchHHHHHHHHHHHHcCCCCCCcccCC--ccchhhhhhcccCCccc
Q 005760 547 QST----IQTQTLATIGYMAPEYGKE---GRVSANGDVYSFGIMLMETFTRKKPTDEIFNG--EMTLKHWVNDWLPISTK 617 (678)
Q Consensus 547 ~~~----~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 617 (678)
... ......++..|+|||...+ ..++...|+||+|++++++++|..||...... .......+.........
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 221 3456789999999999887 57888999999999999999999997653321 11111111111000000
Q ss_pred ccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 618 EIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
....+... ......+.+++..|+..+|..|.++.+....
T Consensus 237 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 237 SPLSPSNP----------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccCcccc----------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000 1223457789999999999999999887764
No 426
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.86 E-value=1.5e-20 Score=224.16 Aligned_cols=277 Identities=21% Similarity=0.272 Sum_probs=170.5
Q ss_pred cccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCcc-CCCCccchhhcccccCCCCCcEEEC
Q 005760 3 QMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNY-LTSSTLELSFLSSLSNCKSLTLISF 81 (678)
Q Consensus 3 ~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~~~~~~l~~L~~L~L 81 (678)
++.++.+. .+|..+ ...+|++|+|++|++. .++..+..+++|+.|+|++|. +..++ .+..+++|+.|+|
T Consensus 595 ~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-------~ls~l~~Le~L~L 664 (1153)
T PLN03210 595 RWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-------DLSMATNLETLKL 664 (1153)
T ss_pred EecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-------ccccCCcccEEEe
Confidence 34444444 455443 4566666666666666 455666666667777766553 33332 2455666677777
Q ss_pred ccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCC
Q 005760 82 SNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLE 161 (678)
Q Consensus 82 ~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~ 161 (678)
++|......|.. +..+. +|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. .++|++|+|++|.++
T Consensus 665 ~~c~~L~~lp~s-i~~L~-~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~ 738 (1153)
T PLN03210 665 SDCSSLVELPSS-IQYLN-KLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE 738 (1153)
T ss_pred cCCCCccccchh-hhccC-CCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc
Confidence 666554444443 45555 66666666665555555544 5666666666666443333322 245666666666665
Q ss_pred CCCCCcc------------------------------cCCCCccEEecCCCcCCCCChhhhhccccccceecccc-cccc
Q 005760 162 GSIPDSI------------------------------CHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSN-ELTS 210 (678)
Q Consensus 162 ~~~~~~~------------------------------~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N-~l~~ 210 (678)
.+|..+ ...++|+.|++++|.....+|..+.++++|+.|+|++| .++.
T Consensus 739 -~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~ 817 (1153)
T PLN03210 739 -EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLET 817 (1153)
T ss_pred -cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCe
Confidence 334321 11245666666666655566666777777777777665 4666
Q ss_pred ccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccc-cc
Q 005760 211 IPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFN-KL 289 (678)
Q Consensus 211 l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~~ 289 (678)
+|..+ .+++|+.|+|++|......|.. .++|+.|+|++|.|+ .+|..+..+++|+.|+|++| ++
T Consensus 818 LP~~~-~L~sL~~L~Ls~c~~L~~~p~~-------------~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L 882 (1153)
T PLN03210 818 LPTGI-NLESLESLDLSGCSRLRTFPDI-------------STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNL 882 (1153)
T ss_pred eCCCC-CccccCEEECCCCCcccccccc-------------ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCc
Confidence 66544 5666777777766443333321 237899999999998 67888999999999999984 56
Q ss_pred cccCCCCCccccccccccccCc
Q 005760 290 EGEIPRGGSFGNFSAESFEGNE 311 (678)
Q Consensus 290 ~~~~~~~~~~~~l~~~~~~~n~ 311 (678)
.+.++....+..+..+++.+++
T Consensus 883 ~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 883 QRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CccCcccccccCCCeeecCCCc
Confidence 6655555667777777777654
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=3.3e-21 Score=214.99 Aligned_cols=248 Identities=25% Similarity=0.348 Sum_probs=196.3
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCChhhhhcccc
Q 005760 21 SKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILPKTSVGNLSH 100 (678)
Q Consensus 21 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~~ 100 (678)
.+.+.|++++++++ .+|..+. ++|+.|+|++|+++.++... ..+|+.|++++|+++.+ |.. ++.
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~LtsLP~~l--------~~nL~~L~Ls~N~LtsL-P~~----l~~ 241 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKSLPENL--------QGNIKTLYANSNQLTSI-PAT----LPD 241 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCcCChhh--------ccCCCEEECCCCccccC-Chh----hhc
Confidence 46899999999999 5676654 58999999999999887542 25899999999999854 432 334
Q ss_pred cccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecC
Q 005760 101 SLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELG 180 (678)
Q Consensus 101 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 180 (678)
+|+.|+|++|++. .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQ 312 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhc
Confidence 8999999999998 4566553 58999999999998 5676664 58999999999999 5665543 579999999
Q ss_pred CCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEc
Q 005760 181 GNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNL 260 (678)
Q Consensus 181 ~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L 260 (678)
+|.++. +|..+. ++|+.|++++|.++.+|..+. ++|+.|++++|+|+ .+|..+. + +|+.|+|
T Consensus 313 ~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~----------~L~~LdL 374 (754)
T PRK15370 313 SNSLTA-LPETLP--PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQIT-VLPETLP--P----------TITTLDV 374 (754)
T ss_pred CCcccc-CCcccc--ccceeccccCCccccCChhhc--CcccEEECCCCCCC-cCChhhc--C----------CcCEEEC
Confidence 999994 454443 689999999999999998664 69999999999998 4555442 2 8999999
Q ss_pred cCCcCCCcchHHHhcccCCCceecccccccccCCCC----CccccccccccccCcccc
Q 005760 261 SNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRG----GSFGNFSAESFEGNELLC 314 (678)
Q Consensus 261 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~----~~~~~l~~~~~~~n~~~c 314 (678)
++|+|+.. |..+. ..|+.|++++|++.+.+... ...+.+..+++.+||+..
T Consensus 375 s~N~Lt~L-P~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 375 SRNALTNL-PENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred CCCcCCCC-CHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 99999954 54444 36999999999998654332 223566788899998753
No 428
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=1.9e-21 Score=185.19 Aligned_cols=171 Identities=12% Similarity=0.129 Sum_probs=133.1
Q ss_pred hhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhh---------hHHHHHHHHHhCCCccceeeeeeeecC
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFK---------SFDVECEMMKSIRHRNIIKVISSCSNE 460 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~---------~~~~e~~~l~~l~h~niv~~~~~~~~~ 460 (678)
..++|+..+.+|.|+||.||++.. ++..+|+|++......... .+.+|++.+.+++||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 478999999999999999999876 5778999999754332222 257899999999999999998875432
Q ss_pred --------CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEE
Q 005760 461 --------EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAH 532 (678)
Q Consensus 461 --------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~k 532 (678)
...++||||++|.+|.++.. .+. ....+++.++..+| +.|++|||++|+||+++++| ++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EE
Confidence 35789999999999988742 222 24569999999999 99999999999999999998 99
Q ss_pred EEeeccccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHH
Q 005760 533 LSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETF 588 (678)
Q Consensus 533 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell 588 (678)
++|||........... ..+.....+..++|+|+||+.+....
T Consensus 175 liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999987654211111 01334445667899999999887554
No 429
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=2.3e-20 Score=176.31 Aligned_cols=139 Identities=17% Similarity=0.167 Sum_probs=108.1
Q ss_pred CccccCCCceeEEEEEeCCCcEEEEEEeecccCc--h-------hhh-----------------HHHHHHHHHhCCCccc
Q 005760 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--V-------FKS-----------------FDVECEMMKSIRHRNI 450 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~e~~~l~~l~h~ni 450 (678)
...||+|++|.||+|...+|+.||+|+++..... . ... ...|++.+..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999778999999999754221 0 112 2349999999988776
Q ss_pred eeeeeeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEEcCCCCCCeeecCCC
Q 005760 451 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPSNVLLDDNM 529 (678)
Q Consensus 451 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dl~~~Nill~~~~ 529 (678)
.....+... ..++||||++++++....... ..++...+..++.|++.++.++ | +.||+||||||+||+++ ++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-CC
Confidence 433332222 237999999988776553322 3578889999999999999999 7 88999999999999998 47
Q ss_pred cEEEEeecccccc
Q 005760 530 VAHLSDFGIAKLL 542 (678)
Q Consensus 530 ~~kl~Dfg~~~~~ 542 (678)
.++++|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999999754
No 430
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.83 E-value=3.1e-22 Score=214.58 Aligned_cols=247 Identities=31% Similarity=0.338 Sum_probs=122.2
Q ss_pred CCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCChhhhhccc
Q 005760 20 ASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILPKTSVGNLS 99 (678)
Q Consensus 20 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~ 99 (678)
-.+|+++++++|++. .+|+.++.+.+|+.|+..+|++..++.. +..+.+|+.|++..|.+.-+.|. ...+.
T Consensus 240 p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~~lp~r------i~~~~~L~~l~~~~nel~yip~~--le~~~ 310 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLVALPLR------ISRITSLVSLSAAYNELEYIPPF--LEGLK 310 (1081)
T ss_pred cccceeeecchhhhh-cchHHHHhcccceEecccchhHHhhHHH------HhhhhhHHHHHhhhhhhhhCCCc--ccccc
Confidence 345556666666665 3345555666666666666665544432 34455555555555555433331 11122
Q ss_pred ccccEEEcccccccccCCccccCCCC-CcEEEccCCccCCcCCh-hhhccCCCCEEEccCCcCCCCCCCcccCCCCccEE
Q 005760 100 HSLEYFEMAYCNVSGGIPEEIGNLTN-LTIIYLGGNKLNGSIPS-TLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKL 177 (678)
Q Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 177 (678)
+|++|+|..|+|....+..|.-+.. |..|+.+.|++. ..|. .=..++.|+.|++.+|.++...-..+.+.++|+.|
T Consensus 311 -sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVL 388 (1081)
T KOG0618|consen 311 -SLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVL 388 (1081)
T ss_pred -eeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeee
Confidence 4555555555555433333333332 455555555554 2221 11123445555555555554333345555555555
Q ss_pred ecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccccccccccccCcccccE
Q 005760 178 ELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLIS 257 (678)
Q Consensus 178 ~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~ 257 (678)
+|++|++.......+.+++.|++|+||+|+|+.+|.++..++.|++|...+|.+. ..| ++..++ +|+.
T Consensus 389 hLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~----------qL~~ 456 (1081)
T KOG0618|consen 389 HLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLP----------QLKV 456 (1081)
T ss_pred eecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcC----------cceE
Confidence 5555555544444455555555555555555555555555555555555555555 333 333333 5555
Q ss_pred EEccCCcCCCcchHHHhcccCCCceecccccc
Q 005760 258 LNLSNNNLSGAIPASLEKLSYLKDLNLSFNKL 289 (678)
Q Consensus 258 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 289 (678)
+|++.|+|+...-......++|++||++||.+
T Consensus 457 lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 457 LDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred EecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 55555555532222222224555555555553
No 431
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=2.8e-21 Score=210.40 Aligned_cols=248 Identities=21% Similarity=0.240 Sum_probs=179.5
Q ss_pred CCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCc-hhhhHH---HHHHHHHhCCCccceeeeeeeecCCeEEEEEE
Q 005760 393 GFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR-VFKSFD---VECEMMKSIRHRNIIKVISSCSNEEFKALVLE 468 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~---~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 468 (678)
+|...+.+|.+.|=.|.+|+..+|. |+||++-.+.+. ..+.|. +|++ ...++|||.+++.-+-......|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6777899999999999999998888 999998655432 233343 3444 556789999998888777778889999
Q ss_pred ecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC-CC--
Q 005760 469 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-RE-- 545 (678)
Q Consensus 469 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~-~~-- 545 (678)
|+.+ +|+|.+..+. ++...+.+.|+.|++.|+..+| +.||+|||||.+|||++.=.-+.|+||..-+..- ++
T Consensus 102 yvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9966 9999997654 5788888899999999999999 9999999999999999999999999997643211 11
Q ss_pred --CCcceeecccCCccccCccccCCC----------C-CCccchHHHHHHHHHHHHc-CCCCCCcccCCccchhhhhhcc
Q 005760 546 --DQSTIQTQTLATIGYMAPEYGKEG----------R-VSANGDVYSFGIMLMETFT-RKKPTDEIFNGEMTLKHWVNDW 611 (678)
Q Consensus 546 --~~~~~~~~~~~~~~y~aPE~~~~~----------~-~~~~~DvwslGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~ 611 (678)
+.............|.|||.+-.. . .+++-||||+||++.|+++ |.+||.- .+...-
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L--------SQL~aY- 247 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL--------SQLLAY- 247 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--------HHHHhH-
Confidence 122222333344569999965331 1 4677899999999999999 7777742 111100
Q ss_pred cCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 005760 612 LPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
..-.....+..-..-....+..++..|++.||++|.+|++.++.-
T Consensus 248 -----------r~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 248 -----------RSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred -----------hccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 000000001111111122477899999999999999999999873
No 432
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=3.5e-20 Score=193.27 Aligned_cols=216 Identities=27% Similarity=0.427 Sum_probs=166.0
Q ss_pred HHhCCCccceeeeeeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe-EEcCCCC
Q 005760 442 MKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQV-IHCDLKP 520 (678)
Q Consensus 442 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i-vH~dl~~ 520 (678)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+......+++.....+.++|+.|++|+| .-.| .|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLH---NSPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHh---cCcceeeeeecc
Confidence 35678999999999999999999999999999999999987778999999999999999999999 4444 9999999
Q ss_pred CCeeecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCC-------CCccchHHHHHHHHHHHHcCCCC
Q 005760 521 SNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGR-------VSANGDVYSFGIMLMETFTRKKP 593 (678)
Q Consensus 521 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-------~~~~~DvwslGv~l~ell~g~~p 593 (678)
.|+++|....+|++|||+.................-..-|.|||.+.... .+.++||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 99999999999999999987654211112222333556799999887641 46679999999999999999999
Q ss_pred CCcccCCccc--hhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 594 TDEIFNGEMT--LKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 594 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
|+........ +..++.. .......|..... .+..+++..++..||..+|++||++.++-..++.+.
T Consensus 158 ~~~~~~~~~~~eii~~~~~----~~~~~~rP~i~~~--------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKK----GGSNPFRPSIELL--------NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred cccccccCChHHHHHHHHh----cCCCCcCcchhhh--------hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 9874433322 2222221 1111222222211 134446889999999999999999999999988776
Q ss_pred H
Q 005760 672 D 672 (678)
Q Consensus 672 ~ 672 (678)
.
T Consensus 226 ~ 226 (484)
T KOG1023|consen 226 K 226 (484)
T ss_pred c
Confidence 4
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.8e-19 Score=167.63 Aligned_cols=189 Identities=14% Similarity=0.118 Sum_probs=139.4
Q ss_pred CCCccccCCCceeEEEEEeCCCcEEEEEEeecccCch----hhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEEEEe
Q 005760 395 SENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV----FKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 395 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
.....|+.|+||+||.+.. .+.+++.+.+....... ...+.+|+++++++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999998876 67888877775432211 125788999999995 5789998886 346899999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCC-CCCCeeecCCCcEEEEeeccccccCCCCCc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDL-KPSNVLLDDNMVAHLSDFGIAKLLTREDQS 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 548 (678)
+.|.+|...... ....++.|++.++.++| +.||+|||| ||+||+++.++.++|+|||++.........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999998754321 11357789999999999 999999999 799999999999999999999865433211
Q ss_pred ----c-------eeecccCCccccCccccC--CCCCCccchHHHHHHHHHHHHcCCCCCCcccC
Q 005760 549 ----T-------IQTQTLATIGYMAPEYGK--EGRVSANGDVYSFGIMLMETFTRKKPTDEIFN 599 (678)
Q Consensus 549 ----~-------~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~ 599 (678)
. .......++.|++|+--. ...--.+.+.++.|+-+|.++|+..|..+..+
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0 011223566777776321 12222567999999999999999998755333
No 434
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.81 E-value=4.2e-21 Score=199.26 Aligned_cols=281 Identities=22% Similarity=0.267 Sum_probs=186.3
Q ss_pred ccccCCcCc-ccCCccccCCCCCCEEecCCCccccc----CCccccCCCCCCEEEccCccCCCCccc-hhhcccccCCCC
Q 005760 2 LQMWENNFS-GTIPRFIFNASKLSILELSDNSFSGF----IPNTFGNLRNLQALRLSNNYLTSSTLE-LSFLSSLSNCKS 75 (678)
Q Consensus 2 L~l~~~~~~-~~~p~~~~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~l~~n~i~~~~~~-~~~~~~~~~l~~ 75 (678)
|+|++++++ ...+..+..+.+|++|++++|.++.. ++..+...++|++|+++++.+...+.. ..+...|..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 788899997 45566667788899999999998543 456677888899999999988742221 123345777899
Q ss_pred CcEEECccCCCcccCChhhhhcccc--cccEEEcccccccc----cCCccccCC-CCCcEEEccCCccCCc----CChhh
Q 005760 76 LTLISFSNNPLDGILPKTSVGNLSH--SLEYFEMAYCNVSG----GIPEEIGNL-TNLTIIYLGGNKLNGS----IPSTL 144 (678)
Q Consensus 76 L~~L~L~~n~i~~~~~~~~~~~l~~--~L~~L~l~~n~l~~----~~~~~~~~l-~~L~~L~l~~N~l~~~----~~~~~ 144 (678)
|+.|++++|.+....+.. +..+.. +|++|++++|++.+ .+...+..+ ++|+.|++++|.+++. .+..+
T Consensus 83 L~~L~l~~~~~~~~~~~~-~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 83 LQELDLSDNALGPDGCGV-LESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred eeEEEccCCCCChhHHHH-HHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 999999999987543333 444432 38888888888873 233445566 8888888888888732 23355
Q ss_pred hccCCCCEEEccCCcCCCC----CCCcccCCCCccEEecCCCcCCCCC----hhhhhccccccceecccccccccc-ccc
Q 005760 145 GKLQKLQGLGLENNKLEGS----IPDSICHSDELYKLELGGNKLSGSI----PECFNNLASLRILLLGSNELTSIP-LTF 215 (678)
Q Consensus 145 ~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~l~~N~i~~~~----~~~~~~l~~L~~L~l~~N~l~~l~-~~~ 215 (678)
..+++|++|+|++|.+++. ++..+..+++|+.|++++|.+++.. +..+..+++|++|++++|.++... ..+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 6667888888888888732 2334455568888888888877443 234456677888888888777421 111
Q ss_pred c-----ccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCc----chHHHhcc-cCCCceecc
Q 005760 216 W-----NLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGA----IPASLEKL-SYLKDLNLS 285 (678)
Q Consensus 216 ~-----~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~----~~~~~~~l-~~L~~L~l~ 285 (678)
. ..++|+.|++++|.++......+... ...+++|+.+++++|.++.. ....+... +.|..|++.
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~------~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEV------LAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVK 315 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHH------HhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccC
Confidence 1 23678888888887763222211110 01224788888888888754 33344444 577777777
Q ss_pred cccc
Q 005760 286 FNKL 289 (678)
Q Consensus 286 ~N~~ 289 (678)
+|+|
T Consensus 316 ~~~~ 319 (319)
T cd00116 316 DDSF 319 (319)
T ss_pred CCCC
Confidence 7765
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=2.8e-19 Score=169.84 Aligned_cols=139 Identities=22% Similarity=0.269 Sum_probs=109.9
Q ss_pred CccccCCCceeEEEEEeCCCcEEEEEEeecccCch--------------------------hhhHHHHHHHHHhCCCccc
Q 005760 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRV--------------------------FKSFDVECEMMKSIRHRNI 450 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~h~ni 450 (678)
...||+|++|.||+|...+|+.||||+++...... ......|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56899999999999987789999999987542110 1123578899999999987
Q ss_pred eeeeeeeecCCeEEEEEEecCCCCHHHH-hhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCC
Q 005760 451 IKVISSCSNEEFKALVLEYMPHGSLEKY-LHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDN 528 (678)
Q Consensus 451 v~~~~~~~~~~~~~lv~e~~~~~~L~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~ 528 (678)
.....+.... .++||||++++++... +.. ..++......++.|++.++.++| . .||+||||||+||+++ +
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-C
Confidence 5444433322 4799999998755433 333 24677888999999999999999 7 9999999999999999 8
Q ss_pred CcEEEEeeccccccC
Q 005760 529 MVAHLSDFGIAKLLT 543 (678)
Q Consensus 529 ~~~kl~Dfg~~~~~~ 543 (678)
+.++++|||++....
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 899999999997654
No 436
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=6.5e-20 Score=179.18 Aligned_cols=195 Identities=23% Similarity=0.338 Sum_probs=139.8
Q ss_pred CCccceeeeeeeec---------------------------CCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHH
Q 005760 446 RHRNIIKVISSCSN---------------------------EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDV 498 (678)
Q Consensus 446 ~h~niv~~~~~~~~---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i 498 (678)
+|||||++.++|.+ +...|+||..+++ +|.+++.... .+.....-+..|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence 59999999876522 2367899998866 9999997665 4555666788999
Q ss_pred HHHHHHHhcCCCCCeEEcCCCCCCeee--cCCC--cEEEEeeccccccCCCC----CcceeecccCCccccCccccCCCC
Q 005760 499 ASALEYLHFGYSAQVIHCDLKPSNVLL--DDNM--VAHLSDFGIAKLLTRED----QSTIQTQTLATIGYMAPEYGKEGR 570 (678)
Q Consensus 499 ~~~l~~LH~~~~~~ivH~dl~~~Nill--~~~~--~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~ 570 (678)
++|+.||| ++||.|||+|++||++ |+++ ...++|||.+---...+ ........-|....||||+.....
T Consensus 351 LEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999 9999999999999998 4444 45789999874222211 111112233667799999865322
Q ss_pred ------CCccchHHHHHHHHHHHHcCCCCCCcccCCccch--hhhhhcccCCcccccccCccCCccchhhHHHHHHHHHH
Q 005760 571 ------VSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTL--KHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFV 642 (678)
Q Consensus 571 ------~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 642 (678)
--.|+|.|+.|.+.||+++...||+. .+++.+ ..|-.+..| ..++.+++.+
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~--rGem~L~~r~Yqe~qLP-------------------alp~~vpp~~ 486 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYK--RGEMLLDTRTYQESQLP-------------------ALPSRVPPVA 486 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccc--cchheechhhhhhhhCC-------------------CCcccCChHH
Confidence 13579999999999999999999987 333332 222111111 1224577889
Q ss_pred HHHHhhccccCcCCCCCHHHHHHHH
Q 005760 643 FNVAMECTVESPEQRINAKEIVTKL 667 (678)
Q Consensus 643 ~~l~~~cl~~dP~~Rps~~ell~~L 667 (678)
.+++...++.||++|++..=....|
T Consensus 487 rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 487 RQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHHHHhcCCccccCCccHHHhHH
Confidence 9999999999999999876655544
No 437
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=2.6e-19 Score=175.72 Aligned_cols=231 Identities=20% Similarity=0.266 Sum_probs=145.6
Q ss_pred CCCCCccccCCCceeEEEEEe-CCCcEEEEEEeecccC---chhhhHHHHHHHHHhCCC----------ccceeeeeee-
Q 005760 393 GFSENNLIGRGSFGSVFKARL-GDGMEVAMKVFNLQYG---RVFKSFDVECEMMKSIRH----------RNIIKVISSC- 457 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h----------~niv~~~~~~- 457 (678)
.+...+.||.|+++.||.+++ .+++++|+|++..... ...+.+.+|.-....+.+ -.++..++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 345568899999999999985 4799999999865432 344566666654444322 1222222211
Q ss_pred --------ec---CC-----eEEEEEEecCCCCHHHHhh---hCCC---CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEE
Q 005760 458 --------SN---EE-----FKALVLEYMPHGSLEKYLH---SSNY---ILDIYQRLNIMIDVASALEYLHFGYSAQVIH 515 (678)
Q Consensus 458 --------~~---~~-----~~~lv~e~~~~~~L~~~l~---~~~~---~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 515 (678)
.. .. ..+++|+-+ .+||.+++. .... ......+..+..|+++.+++|| ..|++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEe
Confidence 11 11 235778877 458887754 2221 2334555677789999999999 999999
Q ss_pred cCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCC--------CCCCccchHHHHHHHHHHH
Q 005760 516 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKE--------GRVSANGDVYSFGIMLMET 587 (678)
Q Consensus 516 ~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslGv~l~el 587 (678)
+||+|+|++++.+|.+.++||+.....+. . ......+..|.+||.... -.++.+.|.|++|+++|.|
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~---~--~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT---R--YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE---E--EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc---e--eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 99999999999999999999998875432 1 111445678999996543 2478889999999999999
Q ss_pred HcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCC
Q 005760 588 FTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQR 657 (678)
Q Consensus 588 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 657 (678)
++|..||+.......... ++..-.+.++.+.+|+..+|+++|.+|
T Consensus 244 WC~~lPf~~~~~~~~~~~-------------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADPEW-------------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGSTSGG-------------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCccccccc-------------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 999999975332211100 000001456679999999999999998
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=3e-21 Score=167.38 Aligned_cols=160 Identities=28% Similarity=0.504 Sum_probs=113.9
Q ss_pred cccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecC
Q 005760 101 SLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELG 180 (678)
Q Consensus 101 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 180 (678)
.++.|.|++|+++ ..|..+..+.+|+.|++++|+|+ ..|..++.++.|+.|+++-|++. .+|..|+.+|.|+.|||.
T Consensus 34 ~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 34 NITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 4555666666665 33445667777777777777776 67777777777777777777777 677777777777777777
Q ss_pred CCcCC-CCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEE
Q 005760 181 GNKLS-GSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLN 259 (678)
Q Consensus 181 ~N~i~-~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~ 259 (678)
+|++. ..+|..|-.++.|..|+|++|.+.-+|..++++.+|+.|.+..|.+. ..|.+++.++ .|+.|.
T Consensus 111 ynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt----------~lrelh 179 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLT----------RLRELH 179 (264)
T ss_pred ccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHH----------HHHHHh
Confidence 77776 45677777777777777777777777777777777777777777776 5666666666 777777
Q ss_pred ccCCcCCCcchHHHhc
Q 005760 260 LSNNNLSGAIPASLEK 275 (678)
Q Consensus 260 L~~N~l~~~~~~~~~~ 275 (678)
+.+|+++ ..|..++.
T Consensus 180 iqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 180 IQGNRLT-VLPPELAN 194 (264)
T ss_pred cccceee-ecChhhhh
Confidence 7777776 44444443
No 439
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=1.9e-20 Score=194.68 Aligned_cols=224 Identities=25% Similarity=0.301 Sum_probs=177.4
Q ss_pred ccCCCceeEEEEE----eCCCcEEEEEEeecccC--chhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEEEEEecCC
Q 005760 400 IGRGSFGSVFKAR----LGDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKALVLEYMPH 472 (678)
Q Consensus 400 ig~G~~g~V~~~~----~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 472 (678)
+|+|.||.|+++. .+.|..+|+|+...... ........|..++...+ ||.++++...++.+...+++.+|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999874 34577899998754422 12224556888888887 99999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceee
Q 005760 473 GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQT 552 (678)
Q Consensus 473 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 552 (678)
|++...+..... +.......+...++-+++++| +.+|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 82 g~lft~l~~~~~-f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---- 153 (612)
T KOG0603|consen 82 GDLFTRLSKEVM-FDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---- 153 (612)
T ss_pred chhhhccccCCc-hHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc----
Confidence 999988877664 555666677888999999999 999999999999999999999999999999876433222
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccccCccCCccchhh
Q 005760 553 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINF 632 (678)
Q Consensus 553 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (678)
+||..|||||+.. ....++|.||||++++||+||..||.. .......+ ..+
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----~~~~~Il~--------------------~~~ 204 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----DTMKRILK--------------------AEL 204 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----HHHHHHhh--------------------hcc
Confidence 7899999999987 566789999999999999999999875 11111100 011
Q ss_pred HHHHHHHHHHHHHHhhccccCcCCCCCH
Q 005760 633 VAKEQCVSFVFNVAMECTVESPEQRINA 660 (678)
Q Consensus 633 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 660 (678)
..+......+.+++..++..+|..|.-.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 2233455668889999999999999855
No 440
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.78 E-value=3.3e-18 Score=204.30 Aligned_cols=279 Identities=20% Similarity=0.244 Sum_probs=180.5
Q ss_pred CCccccCCCCCCEEecCCCc------ccccCCccccCCC-CCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCC
Q 005760 13 IPRFIFNASKLSILELSDNS------FSGFIPNTFGNLR-NLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNP 85 (678)
Q Consensus 13 ~p~~~~~l~~L~~L~l~~n~------i~~~~~~~~~~l~-~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~ 85 (678)
-+++|..+.+|+.|.+..+. +...+|+.|..++ +|+.|++.+|.+..+|.. | ...+|+.|+|.+|+
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~------f-~~~~L~~L~L~~s~ 622 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSN------F-RPENLVKLQMQGSK 622 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCc------C-CccCCcEEECcCcc
Confidence 34567778888888886653 2334566676664 588888888888877753 3 45788888888888
Q ss_pred CcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCC
Q 005760 86 LDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIP 165 (678)
Q Consensus 86 i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 165 (678)
+.... .. +..++ +|+.|+|++|...+.+|. +..+++|+.|+|++|.....+|..+..+++|+.|++++|.....+|
T Consensus 623 l~~L~-~~-~~~l~-~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 623 LEKLW-DG-VHSLT-GLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILP 698 (1153)
T ss_pred ccccc-cc-cccCC-CCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccC
Confidence 76442 22 44555 788888888776666664 6778888888888876555778888888888888888765433566
Q ss_pred CcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccccccc
Q 005760 166 DSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIA 245 (678)
Q Consensus 166 ~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~ 245 (678)
..+ ++++|+.|++++|......|.. .++|+.|++++|.++.+|..+ .+++|..|++.++... ..+..+..+.
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~-~l~~~~~~l~-- 770 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSE-KLWERVQPLT-- 770 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccccccc-cccccccccccccchh-hccccccccc--
Confidence 554 6788888888887655455543 357788888888888877654 4666666666664322 1111111110
Q ss_pred cccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCCCccccccccccccC
Q 005760 246 RIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRGGSFGNFSAESFEGN 310 (678)
Q Consensus 246 ~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~l~~~~~~~n 310 (678)
...+...++|+.|+|++|.....+|..+.++++|+.|++++|+....+|....+..|..++++++
T Consensus 771 ~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c 835 (1153)
T PLN03210 771 PLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGC 835 (1153)
T ss_pred hhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCC
Confidence 01112234677777777765556666667777777777776654444454445555666666654
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=2.6e-20 Score=193.35 Aligned_cols=281 Identities=23% Similarity=0.260 Sum_probs=204.5
Q ss_pred EEecCCCccc-ccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCC-----hhhhhcc
Q 005760 25 ILELSDNSFS-GFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILP-----KTSVGNL 98 (678)
Q Consensus 25 ~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-----~~~~~~l 98 (678)
.|+|..+.++ ......|..+.+|+.|++++|.++..... .++..+...++|+.|+++++.+.+... ...+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~-~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAK-ALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHH-HHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 5788889887 33456677889999999999998654322 344567788899999999998863111 1123444
Q ss_pred cccccEEEcccccccccCCccccCCCC---CcEEEccCCccCCc----CChhhhcc-CCCCEEEccCCcCCCC----CCC
Q 005760 99 SHSLEYFEMAYCNVSGGIPEEIGNLTN---LTIIYLGGNKLNGS----IPSTLGKL-QKLQGLGLENNKLEGS----IPD 166 (678)
Q Consensus 99 ~~~L~~L~l~~n~l~~~~~~~~~~l~~---L~~L~l~~N~l~~~----~~~~~~~l-~~L~~L~L~~n~i~~~----~~~ 166 (678)
+ +|++|++++|.+.+..+..+..+.+ |++|++++|++.+. ....+..+ ++|+.|+|++|.+++. ++.
T Consensus 81 ~-~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 81 C-GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred C-ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 4 8999999999998777777766665 99999999998732 23345667 8999999999999842 334
Q ss_pred cccCCCCccEEecCCCcCCCC----Chhhhhccccccceecccccccc-----ccccccccccccEEEecCCcccCCCCc
Q 005760 167 SICHSDELYKLELGGNKLSGS----IPECFNNLASLRILLLGSNELTS-----IPLTFWNLKDILYLNFSSNFFTGPLPL 237 (678)
Q Consensus 167 ~~~~l~~L~~L~l~~N~i~~~----~~~~~~~l~~L~~L~l~~N~l~~-----l~~~~~~l~~L~~L~l~~N~l~~~~~~ 237 (678)
.+..+++|++|++++|.+++. ++..+..+++|+.|+|++|.++. ++..+..+++|+.|++++|.+++....
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 567778999999999999853 23445566799999999999873 344577889999999999998864333
Q ss_pred cccccccccccccCcccccEEEccCCcCCCc----chHHHhcccCCCceecccccccccC----CC-CCcc-cccccccc
Q 005760 238 EIGNLKIARIDSCDLISLISLNLSNNNLSGA----IPASLEKLSYLKDLNLSFNKLEGEI----PR-GGSF-GNFSAESF 307 (678)
Q Consensus 238 ~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~~~~~~----~~-~~~~-~~l~~~~~ 307 (678)
.+... . ....++|+.|++++|.++.. ....+..+++|+.+++++|+++... .. ...+ ..+..+++
T Consensus 240 ~l~~~----~-~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (319)
T cd00116 240 ALASA----L-LSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWV 314 (319)
T ss_pred HHHHH----H-hccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhccc
Confidence 33211 0 00234899999999999732 3345566789999999999998552 11 1222 46677777
Q ss_pred ccCcc
Q 005760 308 EGNEL 312 (678)
Q Consensus 308 ~~n~~ 312 (678)
.+|||
T Consensus 315 ~~~~~ 319 (319)
T cd00116 315 KDDSF 319 (319)
T ss_pred CCCCC
Confidence 77764
No 442
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=2.1e-20 Score=162.08 Aligned_cols=179 Identities=30% Similarity=0.497 Sum_probs=160.7
Q ss_pred ccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCCCCChhhhhcccccc
Q 005760 120 IGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLR 199 (678)
Q Consensus 120 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~ 199 (678)
+.++.+++.|-||.|+++ ..|..+.++.+|+.|++.+|+|+ .+|..+..+++|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 556889999999999998 77888999999999999999999 88999999999999999999999 8999999999999
Q ss_pred ceeccccccc--cccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhccc
Q 005760 200 ILLLGSNELT--SIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLS 277 (678)
Q Consensus 200 ~L~l~~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 277 (678)
.|||++|.+. .+|..|..+..|+.|+|+.|.+. .+|...+.++ +|+.|.+.+|.+- ..|..++.+.
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt----------~lqil~lrdndll-~lpkeig~lt 173 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLT----------NLQILSLRDNDLL-SLPKEIGDLT 173 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhc----------ceeEEeeccCchh-hCcHHHHHHH
Confidence 9999999998 58999999999999999999998 7888888888 9999999999998 7888999999
Q ss_pred CCCceecccccccccCCCCCcccccc---ccccccCccc
Q 005760 278 YLKDLNLSFNKLEGEIPRGGSFGNFS---AESFEGNELL 313 (678)
Q Consensus 278 ~L~~L~l~~N~~~~~~~~~~~~~~l~---~~~~~~n~~~ 313 (678)
.|+.|.+.||.++-.+|+.+.+.... ...++.|||.
T Consensus 174 ~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 174 RLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred HHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 99999999999998888865543332 3345677774
No 443
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=9.2e-18 Score=187.23 Aligned_cols=252 Identities=22% Similarity=0.254 Sum_probs=186.4
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCC---CccceeeeeeeecCCeEEE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIR---HRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~l 465 (678)
.....|.+.+.||+|+||.||+|...+|+.||+|+=+....+ +|..-.+++.+|+ -+-|..+..++.-.+..++
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 344568888999999999999999878999999997665443 2333345556665 2334455555566777889
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeec-------CCCcEEEEeecc
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLD-------DNMVAHLSDFGI 538 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~-------~~~~~kl~Dfg~ 538 (678)
|+||.+.|+|.+++...+ .+++.-++.++.|++..+++|| ..+|||+||||+|.||. ...-++|+|||-
T Consensus 772 v~ey~~~Gtlld~~N~~~-~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTNK-VMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred eeeccccccHHHhhccCC-CCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 999999999999998554 5899999999999999999999 99999999999999994 345689999999
Q ss_pred ccccCCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccc
Q 005760 539 AKLLTREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 618 (678)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (678)
+..+.--.........++|-.+-=+|...+...++++|-|.++.+++-|+-|+.-= ...+. ..
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--~~~g~---------------~~ 910 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--VKNGS---------------SW 910 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--hcCCc---------------ce
Confidence 98776444455666778999999999999999999999999999999999887531 00000 00
Q ss_pred cccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHHH
Q 005760 619 IVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIRDS 673 (678)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~~~ 673 (678)
.++.. . .+.... .-..+++..+|+.|-..=|...++...|+++.+.
T Consensus 911 ~~~~~-~----~Ry~~~----~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 911 MVKTN-F----PRYWKR----DMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred ecccc-c----hhhhhH----HHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence 01110 0 011111 1133566777776666667788888888777554
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1.3e-17 Score=158.94 Aligned_cols=136 Identities=15% Similarity=0.255 Sum_probs=106.5
Q ss_pred CCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhC-----CCccceeeeeeeecCC---eEE-E
Q 005760 395 SENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-----RHRNIIKVISSCSNEE---FKA-L 465 (678)
Q Consensus 395 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~~~-l 465 (678)
.-.+.||+|+||.||. ...++.. +||++........+.+.+|+.+++.+ .||||++++|++.+.. ..+ +
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3467899999999996 3334444 79988765444567789999999999 5799999999998763 333 7
Q ss_pred EEEe--cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCeEEcCCCCCCeeecC----CCcEEEEeecc
Q 005760 466 VLEY--MPHGSLEKYLHSSNYILDIYQRLNIMIDVASAL-EYLHFGYSAQVIHCDLKPSNVLLDD----NMVAHLSDFGI 538 (678)
Q Consensus 466 v~e~--~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~dl~~~Nill~~----~~~~kl~Dfg~ 538 (678)
|+|| +.+++|.+++.+.. +++. ..++.|++.++ +||| +++|+||||||+||+++. ++.++|+||+.
T Consensus 83 I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 8999 55799999997643 5544 35677888777 9999 999999999999999973 34899999544
Q ss_pred c
Q 005760 539 A 539 (678)
Q Consensus 539 ~ 539 (678)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=2.9e-17 Score=160.64 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=110.5
Q ss_pred CCCCCccccCCCceeEEEEE--eCCCcEEEEEEeecccCc------------------------hhhhHHHHHHHHHhCC
Q 005760 393 GFSENNLIGRGSFGSVFKAR--LGDGMEVAMKVFNLQYGR------------------------VFKSFDVECEMMKSIR 446 (678)
Q Consensus 393 ~~~~~~~ig~G~~g~V~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~ 446 (678)
.|.+.+.||+|++|.||+|. ..+|+.||+|++...... ....+..|++.++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999998 568999999998753210 1123467999999997
Q ss_pred Ccc--ceeeeeeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eEEcCCCCCCe
Q 005760 447 HRN--IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ-VIHCDLKPSNV 523 (678)
Q Consensus 447 h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dl~~~Ni 523 (678)
+.. +.++++. ...++||||+++.++........ .........++.|++.++.+|| +.+ ++||||||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhE
Confidence 533 3344443 23479999999988876653332 3556667889999999999999 999 99999999999
Q ss_pred eecCCCcEEEEeecccccc
Q 005760 524 LLDDNMVAHLSDFGIAKLL 542 (678)
Q Consensus 524 ll~~~~~~kl~Dfg~~~~~ 542 (678)
+++ ++.++++|||.+...
T Consensus 181 li~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEE-CCCEEEEEChhhhcc
Confidence 999 889999999998754
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.5e-16 Score=152.43 Aligned_cols=141 Identities=22% Similarity=0.184 Sum_probs=110.7
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEeecccCc----------------------hhhhHHHHHHHHHhCC
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR----------------------VFKSFDVECEMMKSIR 446 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~ 446 (678)
.....|.+.+.||+|+||.||+|..++|+.||||++...... .......|+.++..+.
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 333448888999999999999999888999999997643210 1123567888888887
Q ss_pred Ccc--ceeeeeeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCee
Q 005760 447 HRN--IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVL 524 (678)
Q Consensus 447 h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nil 524 (678)
|++ +...++. ...++||||+++++|.+.... .....++.+++.++.++| ..+++||||+|+||+
T Consensus 92 ~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nil 157 (198)
T cd05144 92 EEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNIL 157 (198)
T ss_pred HcCCCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEE
Confidence 774 4444432 345899999999998765431 234568899999999999 899999999999999
Q ss_pred ecCCCcEEEEeeccccccC
Q 005760 525 LDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 525 l~~~~~~kl~Dfg~~~~~~ 543 (678)
+++++.++++|||.+....
T Consensus 158 l~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 158 VDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EcCCCcEEEEECCccccCC
Confidence 9999999999999996554
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.6e-16 Score=154.12 Aligned_cols=134 Identities=25% Similarity=0.347 Sum_probs=112.6
Q ss_pred ccccCCCceeEEEEEeCCCcEEEEEEeecccCc--------hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 398 NLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--------VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
+.||+|++|.||+|.. +|..|++|+....... ....+..|++++..++|+++.....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6788999986532211 124567899999999999988777777677778899999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
++|++|.+++.... . .+..++.+++.++.++| ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986542 2 77889999999999999 99999999999999999 78999999998753
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=5.2e-17 Score=177.45 Aligned_cols=212 Identities=23% Similarity=0.274 Sum_probs=148.1
Q ss_pred hcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
.++|..++.|..|+||.||.++++ +.+.+|+|+=+ + ..+.+. ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q-----~lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-Q-----NLILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-c-----chhhhc--cccccCCccee------------------
Confidence 468999999999999999999875 56778885422 1 111111 22222334333
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCc-
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQS- 548 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 548 (678)
||-.+.++..+. ++... +.+++|+| ..+|+|||+||.|.+++.-|++|++|||+++........
T Consensus 136 ---gDc~tllk~~g~-lPvdm--------vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP-LPVDM--------VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ---chhhhhcccCCC-Ccchh--------hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 455555554332 33222 77899999 999999999999999999999999999998643211111
Q ss_pred ------------ceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcc
Q 005760 549 ------------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 616 (678)
Q Consensus 549 ------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (678)
....+.+||+.|.|||++....|...+|+|++|+++||.+.|..||.+.++ ++.+.+.+.+...
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-eelfg~visd~i~--- 276 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVISDDIE--- 276 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-HHHHhhhhhhhcc---
Confidence 112345899999999999999999999999999999999999999987433 3334444332110
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAK 661 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 661 (678)
+.+. .+..++++.+++.+.++.+|..|--..
T Consensus 277 --wpE~------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 277 --WPEE------------DEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred --cccc------------CcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 0000 012456688999999999999997443
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=4.5e-16 Score=171.87 Aligned_cols=139 Identities=22% Similarity=0.298 Sum_probs=112.0
Q ss_pred HhhcCCCCCccccCCCceeEEEEEeCCCcEEEEEEe-ecccC-------chhhhHHHHHHHHHhCCCccceeeeeeeecC
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARLGDGMEVAMKVF-NLQYG-------RVFKSFDVECEMMKSIRHRNIIKVISSCSNE 460 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~-~~~~~-------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 460 (678)
.....|...+.||+|+||+||+|.+... .+++|+. ..... ...+.+.+|+++++.++|++++....++.+.
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 3345567789999999999999987543 3444432 21111 1235678899999999999998887777777
Q ss_pred CeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 461 EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 461 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
...++||||+++++|.+++. ....++.+++.++.+|| +.+++|||+||+||++ .++.++++|||+++
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 77889999999999999885 34678999999999999 9999999999999999 67899999999986
Q ss_pred c
Q 005760 541 L 541 (678)
Q Consensus 541 ~ 541 (678)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 4
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=4.6e-16 Score=149.44 Aligned_cols=130 Identities=20% Similarity=0.331 Sum_probs=105.7
Q ss_pred cccCCCceeEEEEEeCCCcEEEEEEeecccC---c-----hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEec
Q 005760 399 LIGRGSFGSVFKARLGDGMEVAMKVFNLQYG---R-----VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYM 470 (678)
Q Consensus 399 ~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~---~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 470 (678)
.||+|++|.||+|.. +|..|++|+...... + ....+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 678899998643211 1 1255678999999999887655555555566678999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 471 PHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 471 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
+|++|.+++..... .++.+++.++.++| +.+++|+|++|+||+++ ++.++++|||.+..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998764321 68999999999999 99999999999999999 88999999999754
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=4.5e-17 Score=166.56 Aligned_cols=122 Identities=28% Similarity=0.501 Sum_probs=107.6
Q ss_pred eEEEEEEecCCCCHHHHhhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccc
Q 005760 462 FKALVLEYMPHGSLEKYLHSS--NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIA 539 (678)
Q Consensus 462 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~ 539 (678)
..|+.|+++...+|.+|+... ....++.....++.|++.|++| ++.+|+|+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999643 3457788889999999999999 67899999999999999999999999999
Q ss_pred cccCCCC----CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHc
Q 005760 540 KLLTRED----QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFT 589 (678)
Q Consensus 540 ~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~ 589 (678)
+...... .....+...||..||+||-+.+..|+.++||||+|++|+|++.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 8775444 3445667789999999999999999999999999999999996
No 452
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=9e-17 Score=176.33 Aligned_cols=256 Identities=23% Similarity=0.289 Sum_probs=197.5
Q ss_pred hcCCCCCccccCCCceeEEEEEeC--CCcEEEEEEeeccc--CchhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEEE
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLG--DGMEVAMKVFNLQY--GRVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 465 (678)
...|...+.||+|+|+.|-..... ....+|+|.+.... .........|..+-+.+. |+|++.+++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 567888899999999999888643 34556777665432 223344555777777776 9999999999999999999
Q ss_pred EEEecCCCCHHHHh-hhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC-cEEEEeeccccccC
Q 005760 466 VLEYMPHGSLEKYL-HSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLT 543 (678)
Q Consensus 466 v~e~~~~~~L~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~-~~kl~Dfg~~~~~~ 543 (678)
.++|..++++.+-+ .......+......++.|+..++.|+|. ..++.|+|+||+|.+++..+ ..++.|||+|+.+.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999999888 5554346666778899999999999995 67899999999999999999 99999999999887
Q ss_pred C-CCCcceeecccC-CccccCccccCCC-CCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccc
Q 005760 544 R-EDQSTIQTQTLA-TIGYMAPEYGKEG-RVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620 (678)
Q Consensus 544 ~-~~~~~~~~~~~~-~~~y~aPE~~~~~-~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (678)
. .+.........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++...........|.......
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 250 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF------ 250 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccccc------
Confidence 7 566666677778 9999999998874 456789999999999999999999987655554444433221000
Q ss_pred cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 005760 621 DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 664 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell 664 (678)
.............++..+++..+|+.|.+.+++.
T Consensus 251 ----------~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 251 ----------TQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ----------ccCccccCChhhhhcccccccCCchhcccccccc
Confidence 0000111233356788889999999999988764
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=6.8e-15 Score=139.82 Aligned_cols=136 Identities=23% Similarity=0.261 Sum_probs=96.7
Q ss_pred CccccCCCceeEEEEEeCCCcEEEEEEeecccCc--hhhh----------------------HHHHHHHHHhCCCcc--c
Q 005760 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGR--VFKS----------------------FDVECEMMKSIRHRN--I 450 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~e~~~l~~l~h~n--i 450 (678)
.+.||+|+||.||+|...+++.||||++...... .... ...|.+.+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 5689999999999999878999999998653221 1111 124555555554332 3
Q ss_pred eeeeeeeecCCeEEEEEEecCCCCHHH-HhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEcCCCCCCeeecCC
Q 005760 451 IKVISSCSNEEFKALVLEYMPHGSLEK-YLHSSNYILDIYQRLNIMIDVASALEYLHFGYS-AQVIHCDLKPSNVLLDDN 528 (678)
Q Consensus 451 v~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dl~~~Nill~~~ 528 (678)
.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++| . .+++|+|++|+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-C
Confidence 333333 23589999999854321 111111 11 456789999999999999 7 9999999999999999 8
Q ss_pred CcEEEEeeccccccC
Q 005760 529 MVAHLSDFGIAKLLT 543 (678)
Q Consensus 529 ~~~kl~Dfg~~~~~~ 543 (678)
+.++++|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 999999999996553
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=2e-14 Score=131.44 Aligned_cols=135 Identities=20% Similarity=0.264 Sum_probs=112.8
Q ss_pred CCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCC--ccceeeeeeeecCCeEEEEEEecCCC
Q 005760 396 ENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRH--RNIIKVISSCSNEEFKALVLEYMPHG 473 (678)
Q Consensus 396 ~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~ 473 (678)
+.+.||+|.++.||++...+ ..+++|....... ...+..|+..++.++| .++.++++++...+..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 45789999999999999754 7899999865433 4678899999999976 58899999888888899999999887
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 474 SLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 474 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
.+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.+++.|||.+..
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77544 4556677899999999999943335799999999999999999999999998853
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=5.4e-14 Score=137.90 Aligned_cols=135 Identities=18% Similarity=0.237 Sum_probs=104.8
Q ss_pred Ccccc-CCCceeEEEEEeCCCcEEEEEEeeccc-------------CchhhhHHHHHHHHHhCCCccc--eeeeeeeecC
Q 005760 397 NNLIG-RGSFGSVFKARLGDGMEVAMKVFNLQY-------------GRVFKSFDVECEMMKSIRHRNI--IKVISSCSNE 460 (678)
Q Consensus 397 ~~~ig-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~ 460 (678)
...|| .||.|+||.+... +..++||.+.... ......+.+|++++..++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35787 8999999999874 7789999885311 1223567789999999998875 5666654332
Q ss_pred -C---eEEEEEEecCC-CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 461 -E---FKALVLEYMPH-GSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 461 -~---~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
. ..++|||++++ .+|.+++.... ++.. .+.+++.++.++| +.||+|+||||+|||++.++.++++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~--l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAP--LSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCC--CCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 69998886532 4433 3678999999999 99999999999999999999999999
Q ss_pred eccccc
Q 005760 536 FGIAKL 541 (678)
Q Consensus 536 fg~~~~ 541 (678)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 999864
No 456
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.53 E-value=9.1e-16 Score=148.67 Aligned_cols=248 Identities=20% Similarity=0.247 Sum_probs=175.6
Q ss_pred cccCCCCCCEEecCCCccccc----CCccccCCCCCCEEEccCccCCCCccchh-----hcccccCCCCCcEEECccCCC
Q 005760 16 FIFNASKLSILELSDNSFSGF----IPNTFGNLRNLQALRLSNNYLTSSTLELS-----FLSSLSNCKSLTLISFSNNPL 86 (678)
Q Consensus 16 ~~~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~l~~n~i~~~~~~~~-----~~~~~~~l~~L~~L~L~~n~i 86 (678)
.+..++.++.|+|++|.+... +...+.+.++|+..++++-........++ +.+++.+++.|++|+||+|-+
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 456688999999999999744 55667788999999999876554443321 224667888999999999998
Q ss_pred cccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChh-------------hhccCCCCEE
Q 005760 87 DGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPST-------------LGKLQKLQGL 153 (678)
Q Consensus 87 ~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-------------~~~l~~L~~L 153 (678)
..-.+.. +.. -+.++.+|++|.|.+|.+....-.. ..+-+.|+.+
T Consensus 105 G~~g~~~-l~~---------------------ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~ 162 (382)
T KOG1909|consen 105 GPKGIRG-LEE---------------------LLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVF 162 (382)
T ss_pred CccchHH-HHH---------------------HHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEE
Confidence 6444433 222 2344666666667666664221112 1234678888
Q ss_pred EccCCcCCCCC----CCcccCCCCccEEecCCCcCCC----CChhhhhccccccceecccccccc-----cccccccccc
Q 005760 154 GLENNKLEGSI----PDSICHSDELYKLELGGNKLSG----SIPECFNNLASLRILLLGSNELTS-----IPLTFWNLKD 220 (678)
Q Consensus 154 ~L~~n~i~~~~----~~~~~~l~~L~~L~l~~N~i~~----~~~~~~~~l~~L~~L~l~~N~l~~-----l~~~~~~l~~ 220 (678)
..++|++.... ...|...+.|+.+.++.|.|.- .+...|..+++|+.|||.+|.++. +...++.+++
T Consensus 163 i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~ 242 (382)
T KOG1909|consen 163 ICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPH 242 (382)
T ss_pred EeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccch
Confidence 88888876432 3356667888888888888773 233567788999999999998883 4557888999
Q ss_pred ccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcch----HHHhcccCCCceeccccccc
Q 005760 221 ILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIP----ASLEKLSYLKDLNLSFNKLE 290 (678)
Q Consensus 221 L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~l~~N~~~ 290 (678)
|+.|++++|.+......+|.. ......|+|+.|.|.+|.|+..-. .++...+.|..|+|++|.+.
T Consensus 243 L~El~l~dcll~~~Ga~a~~~-----al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 243 LRELNLGDCLLENEGAIAFVD-----ALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred heeecccccccccccHHHHHH-----HHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 999999999998777665532 111237799999999999985322 34456789999999999984
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=7.8e-16 Score=157.53 Aligned_cols=194 Identities=30% Similarity=0.424 Sum_probs=106.2
Q ss_pred EEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcE
Q 005760 49 ALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTI 128 (678)
Q Consensus 49 ~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 128 (678)
.|.|++-++...+..- +=..+.--...+|+.|++..+ |.. +..+. .|+.+.|+.|.+. .+|..+.++..|++
T Consensus 54 ~l~Ls~rrlk~fpr~a----~~~~ltdt~~aDlsrNR~~el-p~~-~~~f~-~Le~liLy~n~~r-~ip~~i~~L~~lt~ 125 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGA----ASYDLTDTVFADLSRNRFSEL-PEE-ACAFV-SLESLILYHNCIR-TIPEAICNLEALTF 125 (722)
T ss_pred ccccccchhhcCCCcc----ccccccchhhhhccccccccC-chH-HHHHH-HHHHHHHHhccce-ecchhhhhhhHHHH
Confidence 3455555555554331 113334444566666666432 222 22222 4555566666555 34555556666666
Q ss_pred EEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceecccccc
Q 005760 129 IYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNEL 208 (678)
Q Consensus 129 L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l 208 (678)
|||+.|+++ ..|..++.|+ |+.|.+++|+++ .+|..++.++.|..||.+.|++. .+|..+.++.+|..|.+..|++
T Consensus 126 l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l 201 (722)
T KOG0532|consen 126 LDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHL 201 (722)
T ss_pred hhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhh
Confidence 666666665 4555555443 566666666666 55555555566666666666666 4455556666666666666666
Q ss_pred ccccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCC
Q 005760 209 TSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLS 266 (678)
Q Consensus 209 ~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~ 266 (678)
..+|..+..| .|..||+|.|++. .+|..|.+|+ .|++|-|.+|.++
T Consensus 202 ~~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~----------~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 202 EDLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMR----------HLQVLQLENNPLQ 247 (722)
T ss_pred hhCCHHHhCC-ceeeeecccCcee-ecchhhhhhh----------hheeeeeccCCCC
Confidence 6666555543 3556666666665 5555555555 6666666666665
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.48 E-value=3.2e-15 Score=153.09 Aligned_cols=198 Identities=24% Similarity=0.412 Sum_probs=144.6
Q ss_pred EEecCCCcccccCCcccc-CCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCChhhhhccccccc
Q 005760 25 ILELSDNSFSGFIPNTFG-NLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILPKTSVGNLSHSLE 103 (678)
Q Consensus 25 ~L~l~~n~i~~~~~~~~~-~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~~~L~ 103 (678)
.|.|++-+++....+++. .+.--...||+.|++..++.+ +..+..|+.+.|..|.+. .+|.. +.++. .|+
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~------~~~f~~Le~liLy~n~~r-~ip~~-i~~L~-~lt 124 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEE------ACAFVSLESLILYHNCIR-TIPEA-ICNLE-ALT 124 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccccCchH------HHHHHHHHHHHHHhccce-ecchh-hhhhh-HHH
Confidence 455666666544333333 344456677777777777654 445566777777777775 33433 56665 677
Q ss_pred EEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCc
Q 005760 104 YFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNK 183 (678)
Q Consensus 104 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~ 183 (678)
.|+|+.|++. .+|..+..|+ |+.|.+++|+++ .+|..++.++.|..|+.+.|.|. .+|.-++++.+|+.|.+..|+
T Consensus 125 ~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~ 200 (722)
T KOG0532|consen 125 FLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNH 200 (722)
T ss_pred Hhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhh
Confidence 7788888777 4566666665 888889999987 67788888888889999999888 677778888899999999998
Q ss_pred CCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCcc
Q 005760 184 LSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLE 238 (678)
Q Consensus 184 i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~ 238 (678)
+. .+|..+..+ .|..||+|+|++..||..|.+|..|++|-|.+|++. ..|..
T Consensus 201 l~-~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq-SPPAq 252 (722)
T KOG0532|consen 201 LE-DLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ-SPPAQ 252 (722)
T ss_pred hh-hCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCCC-CChHH
Confidence 88 445556644 588899999999999988999999999999999887 44443
No 459
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=7.6e-15 Score=146.05 Aligned_cols=215 Identities=21% Similarity=0.243 Sum_probs=130.6
Q ss_pred CCccccCCCCCCEEecCCCcccccCC-ccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCC
Q 005760 13 IPRFIFNASKLSILELSDNSFSGFIP-NTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILP 91 (678)
Q Consensus 13 ~p~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 91 (678)
+.+--+++++|++..|.++.+..... .....+++++.|||+.|-+........+ ...+++|+.|+|+.|++.....
T Consensus 113 i~akQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i---~eqLp~Le~LNls~Nrl~~~~~ 189 (505)
T KOG3207|consen 113 IAAKQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKI---AEQLPSLENLNLSSNRLSNFIS 189 (505)
T ss_pred HHHHhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHH---HHhcccchhcccccccccCCcc
Confidence 33334667888888888888873221 4667788888888888888776654333 4567888888888888864433
Q ss_pred hhhhhcccccccEEEcccccccc-cCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCC--Ccc
Q 005760 92 KTSVGNLSHSLEYFEMAYCNVSG-GIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIP--DSI 168 (678)
Q Consensus 92 ~~~~~~l~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~--~~~ 168 (678)
......++ .|+.|.|+.|.++. .+-..+..+|+|+.|+|..|...........-+..|++|+|++|.+- ..+ ...
T Consensus 190 s~~~~~l~-~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~ 267 (505)
T KOG3207|consen 190 SNTTLLLS-HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKV 267 (505)
T ss_pred ccchhhhh-hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-cccccccc
Confidence 33222333 67777777777762 12233445677777777777422233333344566777777777765 333 345
Q ss_pred cCCCCccEEecCCCcCCCCC-hhh-----hhccccccceeccccccccccc--cccccccccEEEecCCccc
Q 005760 169 CHSDELYKLELGGNKLSGSI-PEC-----FNNLASLRILLLGSNELTSIPL--TFWNLKDILYLNFSSNFFT 232 (678)
Q Consensus 169 ~~l~~L~~L~l~~N~i~~~~-~~~-----~~~l~~L~~L~l~~N~l~~l~~--~~~~l~~L~~L~l~~N~l~ 232 (678)
..+|.|..|.++.+.|..+- |+. ...+++|++|+++.|+|...+. .+..+++|+.|.+..|.++
T Consensus 268 ~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 268 GTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 56666677777776666432 221 2335566666666666665543 3445555566665566555
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=9.7e-14 Score=148.29 Aligned_cols=196 Identities=29% Similarity=0.449 Sum_probs=103.0
Q ss_pred EEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCC-CCCcEEECccCCCcccCChhhhhccccccc
Q 005760 25 ILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNC-KSLTLISFSNNPLDGILPKTSVGNLSHSLE 103 (678)
Q Consensus 25 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~~l~~~L~ 103 (678)
.|++..|.+. .....+..++.++.|++.+|.+.+++... ..+ .+|+.|++++|.+..+. .....++ .|+
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~i~~~~------~~~~~nL~~L~l~~N~i~~l~--~~~~~l~-~L~ 166 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITDIPPLI------GLLKSNLKELDLSDNKIESLP--SPLRNLP-NLK 166 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccccCcccc------ccchhhcccccccccchhhhh--hhhhccc-ccc
Confidence 5888888885 33455666788999999999999988652 334 37888888888886431 0123333 444
Q ss_pred EEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCc
Q 005760 104 YFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNK 183 (678)
Q Consensus 104 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~ 183 (678)
.|++++|++... |...+.+++|+.|++++|+++ .+|.....+.+|++|.+++|.+. ..+..+..+.++..|.+.+|+
T Consensus 167 ~L~l~~N~l~~l-~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~ 243 (394)
T COG4886 167 NLDLSFNDLSDL-PKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNK 243 (394)
T ss_pred ccccCCchhhhh-hhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCce
Confidence 444444444422 222224445555555555554 33333333333555555555322 233344444444444444444
Q ss_pred CCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCC
Q 005760 184 LSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPL 235 (678)
Q Consensus 184 i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~ 235 (678)
+. ..+..++.+++|+.|++++|+++.++. +..+.+|+.|++++|.+....
T Consensus 244 ~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 244 LE-DLPESIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred ee-eccchhccccccceecccccccccccc-ccccCccCEEeccCccccccc
Confidence 44 223344444444455555554444443 444444444444444444333
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.43 E-value=6e-13 Score=141.96 Aligned_cols=141 Identities=23% Similarity=0.273 Sum_probs=99.9
Q ss_pred CccccCCCceeEEEEEeCCCcEEEEEEeecccCchh----------------------------------------hhHH
Q 005760 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVF----------------------------------------KSFD 436 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 436 (678)
.+.||.|++|.||+|+.++|+.||||+.++...+.. -++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 368999999999999999999999999864321100 1244
Q ss_pred HHHHHHHhCC----Cccceeeeeee-ecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHH-HHHHHhcCCC
Q 005760 437 VECEMMKSIR----HRNIIKVISSC-SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS-ALEYLHFGYS 510 (678)
Q Consensus 437 ~e~~~l~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~-~l~~LH~~~~ 510 (678)
.|.+.+..++ |.+-+.+-..+ ...+..++||||++|++|.++........+ ...++.+++. .+..+| .
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~---~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVL---R 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHH---h
Confidence 5555555542 32222222222 223446899999999999887754322222 3446666665 478889 8
Q ss_pred CCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 511 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 511 ~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
.|++|+|++|.||+++.++.++++|||++..+.
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 999999999999999999999999999997664
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.42 E-value=2.8e-13 Score=144.70 Aligned_cols=179 Identities=34% Similarity=0.481 Sum_probs=102.4
Q ss_pred cccEEEcccccccccCCccccCCC-CCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEec
Q 005760 101 SLEYFEMAYCNVSGGIPEEIGNLT-NLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLEL 179 (678)
Q Consensus 101 ~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 179 (678)
.++.|++.+|.++.+. .....++ +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|.....+++|+.|++
T Consensus 117 ~l~~L~l~~n~i~~i~-~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNITDIP-PLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCcccccCc-cccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 4555555555555332 2233332 6666666666665 44455566666666666666666 44444445666666666
Q ss_pred CCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEE
Q 005760 180 GGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLN 259 (678)
Q Consensus 180 ~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~ 259 (678)
++|++. .+|........|++|.+++|.+..++..+..+.++..|.+.+|++... +..+..+. +|+.|+
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~-~~~~~~l~----------~l~~L~ 261 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDL-PESIGNLS----------NLETLD 261 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeec-cchhcccc----------ccceec
Confidence 666666 444433444456666666665555555566666666666666665521 33333333 666666
Q ss_pred ccCCcCCCcchHHHhcccCCCceecccccccccCCCC
Q 005760 260 LSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRG 296 (678)
Q Consensus 260 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 296 (678)
+++|+++...+ ++.+.+++.|++++|.+...++..
T Consensus 262 ~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 262 LSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred ccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 66666664433 566666666666666666554443
No 463
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.41 E-value=5.4e-14 Score=133.14 Aligned_cols=135 Identities=26% Similarity=0.385 Sum_probs=89.2
Q ss_pred ccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCCCCChhhhhcccccc
Q 005760 120 IGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLR 199 (678)
Q Consensus 120 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~ 199 (678)
....+.|++||||+|.|+ .+.+...-+|.++.|+++.|+|+ .+. .+..+++|+.|||++|.++ ..-..-.++-+.+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 334566777777777776 55666666677777777777776 433 3777777777777777777 3333334566777
Q ss_pred ceeccccccccccccccccccccEEEecCCcccCCCC-ccccccccccccccCcccccEEEccCCcCCCcc
Q 005760 200 ILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLP-LEIGNLKIARIDSCDLISLISLNLSNNNLSGAI 269 (678)
Q Consensus 200 ~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~ 269 (678)
.|.|+.|.|.++. ++.++-+|..||+++|+|..... ..++ ++|-|+.|.|.+|.+....
T Consensus 356 tL~La~N~iE~LS-GL~KLYSLvnLDl~~N~Ie~ldeV~~IG----------~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 356 TLKLAQNKIETLS-GLRKLYSLVNLDLSSNQIEELDEVNHIG----------NLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred eeehhhhhHhhhh-hhHhhhhheeccccccchhhHHHhcccc----------cccHHHHHhhcCCCccccc
Confidence 7777777777664 45666677777888887763221 2233 4458888888888887443
No 464
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.41 E-value=6.6e-12 Score=132.65 Aligned_cols=168 Identities=18% Similarity=0.237 Sum_probs=130.0
Q ss_pred EeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHH
Q 005760 412 RLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR 491 (678)
Q Consensus 412 ~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 491 (678)
+..++.+|.|..++....+..+...+-++.++.++||+|+++++.....+..|+|+|.+ ..|..++.... ...+
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~----~~~v 106 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG----KEEV 106 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH----HHHH
Confidence 34578899999987665555566788889999999999999999999999999999987 35777776543 4555
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCCcceeecccCCccccCccccCCCCC
Q 005760 492 LNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQSTIQTQTLATIGYMAPEYGKEGRV 571 (678)
Q Consensus 492 ~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 571 (678)
..-+.||+.||.+||+ +.+++|+++.-..|++++.|+.||++|.++...... .......+.-..|..|+.+....
T Consensus 107 ~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~--~~~~~~~~~~~s~~~P~~~~~s~- 181 (690)
T KOG1243|consen 107 CLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGF--NAPAKSLYLIESFDDPEEIDPSE- 181 (690)
T ss_pred HHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccC--CcccccchhhhcccChhhcCccc-
Confidence 6678899999999986 789999999999999999999999999988654321 11112222333466676543333
Q ss_pred CccchHHHHHHHHHHHHcCC
Q 005760 572 SANGDVYSFGIMLMETFTRK 591 (678)
Q Consensus 572 ~~~~DvwslGv~l~ell~g~ 591 (678)
-..|.|.|||+++|++.|.
T Consensus 182 -~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 -WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred -cchhhhhHHHHHHHHhCcc
Confidence 2459999999999999983
No 465
>PLN03150 hypothetical protein; Provisional
Probab=99.36 E-value=1.7e-12 Score=145.10 Aligned_cols=111 Identities=34% Similarity=0.509 Sum_probs=88.5
Q ss_pred ccceeccccccc-cccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcc
Q 005760 198 LRILLLGSNELT-SIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKL 276 (678)
Q Consensus 198 L~~L~l~~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 276 (678)
++.|+|++|.++ .+|..+..+++|+.|+|++|.+.+.+|..+..++ +|+.|+|++|++++.+|..+..+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~----------~L~~LdLs~N~lsg~iP~~l~~L 489 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSIT----------SLEVLDLSYNSFNGSIPESLGQL 489 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCC----------CCCEEECCCCCCCCCCchHHhcC
Confidence 677888888887 5677788888888888888888888888777776 88888888888888888888888
Q ss_pred cCCCceecccccccccCCCCC--ccccccccccccCccccCCCC
Q 005760 277 SYLKDLNLSFNKLEGEIPRGG--SFGNFSAESFEGNELLCGSPN 318 (678)
Q Consensus 277 ~~L~~L~l~~N~~~~~~~~~~--~~~~l~~~~~~~n~~~c~~~~ 318 (678)
++|+.|+|++|++++.+|... ....+..+++.+|+..|+.|.
T Consensus 490 ~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 490 TSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 888888888888888877641 123455678889999998764
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=1.4e-12 Score=136.66 Aligned_cols=248 Identities=24% Similarity=0.288 Sum_probs=181.2
Q ss_pred CCCCCccccC--CCceeEEEEEe---CCCcEEEEEEeecccC--chhhhHHHHHHHHHhCC-CccceeeeeeeecCCeEE
Q 005760 393 GFSENNLIGR--GSFGSVFKARL---GDGMEVAMKVFNLQYG--RVFKSFDVECEMMKSIR-HRNIIKVISSCSNEEFKA 464 (678)
Q Consensus 393 ~~~~~~~ig~--G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 464 (678)
.|...+.+|. |.+|.||.+.. .++..+|+|.-+.... .....=.+|+...+.++ |++.++....+.+.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556788999 99999999975 3678899988433222 33333355676666664 999999888899999999
Q ss_pred EEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCeEEcCCCCCCeeecCC-CcEEEEeeccc
Q 005760 465 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS----ALEYLHFGYSAQVIHCDLKPSNVLLDDN-MVAHLSDFGIA 539 (678)
Q Consensus 465 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~dl~~~Nill~~~-~~~kl~Dfg~~ 539 (678)
+-+|++. .++.++.+.....++....+....+... |+.++| ..+++|-|++|.||+...+ ..++++|||+.
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCccee
Confidence 9999984 6888888877667888888889988888 999999 9999999999999999998 89999999999
Q ss_pred cccCCCCCcce---eecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcc
Q 005760 540 KLLTREDQSTI---QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 616 (678)
Q Consensus 540 ~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (678)
..+........ .-...+...|++||... +.++...|+|++|.+..+-.++..++..- ....| .+.+
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g-----~~~~W----~~~r- 339 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVG-----KNSSW----SQLR- 339 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCC-----CCCCc----cccc-
Confidence 88765542211 12236788899999864 46788899999999999999887664220 00111 1111
Q ss_pred cccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 005760 617 KEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 665 (678)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~ 665 (678)
....+.-.- .....++...+..|++.+|-.|++++.+..
T Consensus 340 -~~~ip~e~~---------~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 340 -QGYIPLEFC---------EGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -cccCchhhh---------cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 000110000 011233445888999999999999887754
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.35 E-value=1.3e-13 Score=130.52 Aligned_cols=136 Identities=26% Similarity=0.354 Sum_probs=114.2
Q ss_pred hccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEE
Q 005760 145 GKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYL 224 (678)
Q Consensus 145 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L 224 (678)
.....|++|+|+.|.|+ .+..+..-+|.++.|++++|.|..+ ..++.+++|+.||||+|.++++...-.++.+.+.|
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTL 357 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhhhHhhhcCEeee
Confidence 33467999999999999 7888999999999999999999944 33899999999999999999998777788899999
Q ss_pred EecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcch-HHHhcccCCCceecccccccccCCC
Q 005760 225 NFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIP-ASLEKLSYLKDLNLSFNKLEGEIPR 295 (678)
Q Consensus 225 ~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~~~~~~~~ 295 (678)
.|++|.|. .++++. .+.+|..||+++|+|..... ..++++|.|+.+.|.+||+.+.+.-
T Consensus 358 ~La~N~iE-----~LSGL~-------KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 358 KLAQNKIE-----TLSGLR-------KLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred ehhhhhHh-----hhhhhH-------hhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 99999986 233332 34489999999999985443 4678899999999999999876543
No 468
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=1.2e-13 Score=137.73 Aligned_cols=217 Identities=24% Similarity=0.229 Sum_probs=128.4
Q ss_pred CCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCChhhhhcccccccEEEcccccccccCCccccC
Q 005760 43 NLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGN 122 (678)
Q Consensus 43 ~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~ 122 (678)
++++|+...|.+..+...+.+ .....|++++.|||++|-+....+.. ....+
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~----~~~k~~~~v~~LdLS~NL~~nw~~v~------------------------~i~eq 170 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIE----EYSKILPNVRDLDLSRNLFHNWFPVL------------------------KIAEQ 170 (505)
T ss_pred hHHhhhheeecCccccccchh----hhhhhCCcceeecchhhhHHhHHHHH------------------------HHHHh
Confidence 566777777777776655532 12456677777777777665443322 22456
Q ss_pred CCCCcEEEccCCccCCcCCh-hhhccCCCCEEEccCCcCCCC-CCCcccCCCCccEEecCCCcCCCCChhhhhccccccc
Q 005760 123 LTNLTIIYLGGNKLNGSIPS-TLGKLQKLQGLGLENNKLEGS-IPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRI 200 (678)
Q Consensus 123 l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~ 200 (678)
|++|+.|+|+.|++...... .-..+++|+.|.|+.|.++-. +......+|+|+.|+|.+|...........-++.|+.
T Consensus 171 Lp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~ 250 (505)
T KOG3207|consen 171 LPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQE 250 (505)
T ss_pred cccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhh
Confidence 78888888888877622211 112467788888888887621 2223445678888888888533233334445667888
Q ss_pred eeccccccccccc--cccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcch-HHHhccc
Q 005760 201 LLLGSNELTSIPL--TFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIP-ASLEKLS 277 (678)
Q Consensus 201 L~l~~N~l~~l~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~~~~l~ 277 (678)
|+|++|.+-.++. ....++.|..|+++.+.+..+.-..-..+. ....+|+|++|+++.|+|..... ..+..++
T Consensus 251 LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~----kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~ 326 (505)
T KOG3207|consen 251 LDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLD----KTHTFPKLEYLNISENNIRDWRSLNHLRTLE 326 (505)
T ss_pred ccccCCcccccccccccccccchhhhhccccCcchhcCCCccchh----hhcccccceeeecccCccccccccchhhccc
Confidence 8888888777763 466777777777777776532211110000 01246677777777777753211 3344455
Q ss_pred CCCceecccccccc
Q 005760 278 YLKDLNLSFNKLEG 291 (678)
Q Consensus 278 ~L~~L~l~~N~~~~ 291 (678)
+|+.|.+..|+++.
T Consensus 327 nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 327 NLKHLRITLNYLNK 340 (505)
T ss_pred hhhhhhcccccccc
Confidence 66666666666553
No 469
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=2.1e-12 Score=124.23 Aligned_cols=198 Identities=18% Similarity=0.289 Sum_probs=137.5
Q ss_pred HHhCCCccceeeeeeeecC-----CeEEEEEEecCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 005760 442 MKSIRHRNIIKVISSCSNE-----EFKALVLEYMPHGSLEKYLHSSN---YILDIYQRLNIMIDVASALEYLHFGYSAQV 513 (678)
Q Consensus 442 l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 513 (678)
+-.+.|.|||++..|+.+. ....+++||+..|++..++++.. ..+......+|..||++||.||| +++..|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh-s~~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH-SCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh-ccCCcc
Confidence 3345699999998887543 35678999999999999997543 35667777889999999999999 678999
Q ss_pred EEcCCCCCCeeecCCCcEEEEeecccccc--CCCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCC
Q 005760 514 IHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TREDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRK 591 (678)
Q Consensus 514 vH~dl~~~Nill~~~~~~kl~Dfg~~~~~--~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~ 591 (678)
+|+++.-.-|++..+|-+|+.--.-.... .............+-++|.+||.-.....+.++|||+||....||..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 99999999999999999998532111100 0001111223344678999999988888888999999999999999877
Q ss_pred CCCCcccC---CccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 005760 592 KPTDEIFN---GEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK 666 (678)
Q Consensus 592 ~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~ 666 (678)
.-...... .+...... ..-..++. =..++..|++..|..||+|.+++..
T Consensus 280 iq~tnseS~~~~ee~ia~~--------i~~len~l------------------qr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 280 IQSTNSESKVEVEENIANV--------IIGLENGL------------------QRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred eccCCCcceeehhhhhhhh--------eeeccCcc------------------ccCcCcccccCCCCCCcchhhhhcC
Confidence 54211111 01111100 00000000 1146778999999999999988653
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.33 E-value=1.4e-13 Score=147.23 Aligned_cols=195 Identities=26% Similarity=0.307 Sum_probs=101.0
Q ss_pred CCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCcccCChhhhhccc
Q 005760 20 ASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILPKTSVGNLS 99 (678)
Q Consensus 20 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~ 99 (678)
+..++.++++.|.|.. .-..+..+++|+.|++.+|+|..+... +..+++|++|+|++|.|+.+.+ +..+.
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~------l~~~~~L~~L~ls~N~I~~i~~---l~~l~ 140 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENL------LSSLVNLQVLDLSFNKITKLEG---LSTLT 140 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccc------hhhhhcchheeccccccccccc---hhhcc
Confidence 4555556666666663 234455666666666666666655531 3556666666666666665544 22333
Q ss_pred ccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCC-hhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEe
Q 005760 100 HSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIP-STLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLE 178 (678)
Q Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 178 (678)
.|+.|++++|.|..+ ..+..+++|+.+++++|++..+.+ . ...+.+++.+.+.+|.+. ....+..+..+..++
T Consensus 141 -~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~ 214 (414)
T KOG0531|consen 141 -LLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLS 214 (414)
T ss_pred -chhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhh
Confidence 355555555555543 224445555556666665553322 1 344555555555555554 122334444444445
Q ss_pred cCCCcCCCCChhhhhccc--cccceeccccccccccccccccccccEEEecCCccc
Q 005760 179 LGGNKLSGSIPECFNNLA--SLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFT 232 (678)
Q Consensus 179 l~~N~i~~~~~~~~~~l~--~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~ 232 (678)
+..|.++..-+ +..+. .|+.+++++|.+..++..+..+.++..|++++|++.
T Consensus 215 l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 215 LLDNKISKLEG--LNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred cccccceeccC--cccchhHHHHHHhcccCccccccccccccccccccchhhcccc
Confidence 55555552211 11122 255555555555555444444555555555555544
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.29 E-value=3.5e-12 Score=116.76 Aligned_cols=122 Identities=28% Similarity=0.352 Sum_probs=31.2
Q ss_pred cccCCcCcccCCccccCCCCCCEEecCCCcccccCCcccc-CCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEEC
Q 005760 3 QMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFG-NLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISF 81 (678)
Q Consensus 3 ~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L 81 (678)
.|..+-|. ..|. +-+...+++|+|++|+|+.+ +.++ .+.+|+.|+|++|.|++++ .+..+++|++|++
T Consensus 3 ~lt~~~i~-~~~~-~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~-------~l~~L~~L~~L~L 71 (175)
T PF14580_consen 3 RLTANMIE-QIAQ-YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLE-------GLPGLPRLKTLDL 71 (175)
T ss_dssp -------------------------------------S--TT-TT--EEE-TTS--S--T-------T----TT--EEE-
T ss_pred cccccccc-cccc-cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCcccc-------CccChhhhhhccc
Confidence 34444454 4443 34455678899999999854 3454 5788889999999988766 3667888888888
Q ss_pred ccCCCcccCChhhhhcccccccEEEcccccccccC-CccccCCCCCcEEEccCCccC
Q 005760 82 SNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGI-PEEIGNLTNLTIIYLGGNKLN 137 (678)
Q Consensus 82 ~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~N~l~ 137 (678)
++|.|+.+.+ .....++ +|++|+|++|+|.... -..+..+++|+.|+|.+|.+.
T Consensus 72 ~~N~I~~i~~-~l~~~lp-~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 72 SNNRISSISE-GLDKNLP-NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -SS---S-CH-HHHHH-T-T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCCCCCcccc-chHHhCC-cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 8888875532 1112233 5555555555555322 133444555555555555554
No 472
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.26 E-value=1.7e-11 Score=132.15 Aligned_cols=147 Identities=20% Similarity=0.199 Sum_probs=93.3
Q ss_pred hcCCCCCccccCCCceeEEEEEeCC-CcEEEEEEeecccCc----------------------------------hhh--
Q 005760 391 TDGFSENNLIGRGSFGSVFKARLGD-GMEVAMKVFNLQYGR----------------------------------VFK-- 433 (678)
Q Consensus 391 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~-- 433 (678)
-..|+. +.||+|++|.||+|+.++ |+.||||+.++...+ ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999876 999999999754210 011
Q ss_pred ----hHHHHHHHHHhCC----Cccceeeeeeeec-CCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHH-HHHH
Q 005760 434 ----SFDVECEMMKSIR----HRNIIKVISSCSN-EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVA-SALE 503 (678)
Q Consensus 434 ----~~~~e~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~-~~l~ 503 (678)
++..|+..+.+++ +...+.+-.++.+ ....++||||++|+++.++-.-.....+... ++...+ .-+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~---la~~~v~~~~~ 274 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKL---LAERGVEVFFT 274 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHH---HHHHHHHHHHH
Confidence 2333444443332 3333333232222 3346799999999999875321111122221 222111 1233
Q ss_pred HHhcCCCCCeEEcCCCCCCeeecCCC----cEEEEeeccccccCC
Q 005760 504 YLHFGYSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTR 544 (678)
Q Consensus 504 ~LH~~~~~~ivH~dl~~~Nill~~~~----~~kl~Dfg~~~~~~~ 544 (678)
.+. ..|++|+|++|.||+++.++ .+++.|||++..+..
T Consensus 275 Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 QVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 344 68999999999999999888 999999999987654
No 473
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.26 E-value=2.5e-11 Score=113.21 Aligned_cols=127 Identities=20% Similarity=0.208 Sum_probs=95.4
Q ss_pred CccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccce-eeeeeeecCCeEEEEEEecCCCCH
Q 005760 397 NNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNII-KVISSCSNEEFKALVLEYMPHGSL 475 (678)
Q Consensus 397 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~~L 475 (678)
.+.++.|.++.||+++.. +..+++|+...... ....+..|+.+++.+.+.+++ +++.+.. +..++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 357899999999999874 77899999754322 234567899999988655544 4454433 234799999999877
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 476 EKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQ-----VIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 476 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
.+. . . .....+.+++++++.|| ..+ ++|+|++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~----~--~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTE----D--F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccc----c--c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 543 0 1 11245678999999999 666 59999999999999 6789999999875
No 474
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.26 E-value=5.1e-13 Score=129.79 Aligned_cols=245 Identities=21% Similarity=0.265 Sum_probs=161.4
Q ss_pred ccccCCcCcc----cCCccccCCCCCCEEecCCC---cccccC-------CccccCCCCCCEEEccCccCCCCccchhhc
Q 005760 2 LQMWENNFSG----TIPRFIFNASKLSILELSDN---SFSGFI-------PNTFGNLRNLQALRLSNNYLTSSTLELSFL 67 (678)
Q Consensus 2 L~l~~~~~~~----~~p~~~~~l~~L~~L~l~~n---~i~~~~-------~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~ 67 (678)
|+|++|.+.. .+.+.+.+.++|+..+++.= +....+ .+++...++|++||||+|.+..-... ++-
T Consensus 35 l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~-~l~ 113 (382)
T KOG1909|consen 35 LDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIR-GLE 113 (382)
T ss_pred EeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchH-HHH
Confidence 6889998853 45566777888999888863 222223 34455668999999999999865543 233
Q ss_pred ccccCCCCCcEEECccCCCcccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCC----hh
Q 005760 68 SSLSNCKSLTLISFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIP----ST 143 (678)
Q Consensus 68 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~----~~ 143 (678)
+-++.+..|+.|.|.+|.+....... +...|..|. .++ -...-++|+.+...+|++..... ..
T Consensus 114 ~ll~s~~~L~eL~L~N~Glg~~ag~~----l~~al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga~~~A~~ 180 (382)
T KOG1909|consen 114 ELLSSCTDLEELYLNNCGLGPEAGGR----LGRALFELA--VNK-------KAASKPKLRVFICGRNRLENGGATALAEA 180 (382)
T ss_pred HHHHhccCHHHHhhhcCCCChhHHHH----HHHHHHHHH--HHh-------ccCCCcceEEEEeeccccccccHHHHHHH
Confidence 34567899999999999885322211 111222222 111 13345778888888888863322 35
Q ss_pred hhccCCCCEEEccCCcCCCC----CCCcccCCCCccEEecCCCcCCCC----Chhhhhccccccceecccccccc-----
Q 005760 144 LGKLQKLQGLGLENNKLEGS----IPDSICHSDELYKLELGGNKLSGS----IPECFNNLASLRILLLGSNELTS----- 210 (678)
Q Consensus 144 ~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~l~~N~i~~~----~~~~~~~l~~L~~L~l~~N~l~~----- 210 (678)
|...+.|+.+.++.|.|... +..+|..+++|+.|||..|-++.. +.+.++.+++|+.|++++|.++.
T Consensus 181 ~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a 260 (382)
T KOG1909|consen 181 FQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIA 260 (382)
T ss_pred HHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHH
Confidence 56678888888888888621 234677888888888888888843 34556677888888888888873
Q ss_pred ccccc-cccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCC
Q 005760 211 IPLTF-WNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLS 266 (678)
Q Consensus 211 l~~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~ 266 (678)
+-..+ ...|+|+.|.|.+|.|+......+. ......|.|+.|+|++|.+.
T Consensus 261 ~~~al~~~~p~L~vl~l~gNeIt~da~~~la------~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 261 FVDALKESAPSLEVLELAGNEITRDAALALA------ACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHhccCCCCceeccCcchhHHHHHHHHH------HHHhcchhhHHhcCCccccc
Confidence 22222 3467888999999988733322211 11223558899999999884
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.25 E-value=5.7e-12 Score=115.34 Aligned_cols=107 Identities=26% Similarity=0.365 Sum_probs=27.5
Q ss_pred CCCCCcEEEccCCccCCcCChhhh-ccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccc
Q 005760 122 NLTNLTIIYLGGNKLNGSIPSTLG-KLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRI 200 (678)
Q Consensus 122 ~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~ 200 (678)
+..++++|+|.+|+|+.+ +.++ .+.+|+.|+|++|.|+ .++ .+..++.|++|++++|.|+...+.....+++|+.
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 344566666666666532 2233 3556666666666666 332 3555666666666666666332222234566666
Q ss_pred eeccccccccccc--cccccccccEEEecCCccc
Q 005760 201 LLLGSNELTSIPL--TFWNLKDILYLNFSSNFFT 232 (678)
Q Consensus 201 L~l~~N~l~~l~~--~~~~l~~L~~L~l~~N~l~ 232 (678)
|+|++|+|.++.. .+..+++|+.|+|.+|++.
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 6666666655432 3444555555555555543
No 476
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.21 E-value=2.1e-12 Score=138.21 Aligned_cols=210 Identities=29% Similarity=0.373 Sum_probs=163.6
Q ss_pred cccCCcCcccCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECc
Q 005760 3 QMWENNFSGTIPRFIFNASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFS 82 (678)
Q Consensus 3 ~l~~~~~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~ 82 (678)
+++.|.|. .+-..+..+++|+.|++.+|+|..+ ...+..+++|+.|+|++|+|+++. .+..++.|+.|+++
T Consensus 78 ~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~-------~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 78 NLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE-------GLSTLTLLKELNLS 148 (414)
T ss_pred ccchhhhh-hhhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc-------chhhccchhhheec
Confidence 45666666 3445578899999999999999954 333889999999999999999877 46788889999999
Q ss_pred cCCCcccCChhhhhcccccccEEEcccccccccCC-ccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCC
Q 005760 83 NNPLDGILPKTSVGNLSHSLEYFEMAYCNVSGGIP-EEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLE 161 (678)
Q Consensus 83 ~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~ 161 (678)
+|.|..+.. +..+. .|+.+++++|++....+ . ...+.+|+.+.+++|.+..+ ..+..+..+..+++..|.++
T Consensus 149 ~N~i~~~~~---~~~l~-~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 149 GNLISDISG---LESLK-SLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred cCcchhccC---Cccch-hhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccce
Confidence 999986644 33344 89999999999997765 3 57889999999999999733 44555667777799999998
Q ss_pred CCCCCcccCCCC--ccEEecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCccc
Q 005760 162 GSIPDSICHSDE--LYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFT 232 (678)
Q Consensus 162 ~~~~~~~~~l~~--L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~ 232 (678)
.+ ..+..++. |+.+++++|++. ..+..+..+.++..|++.+|++..+.. +.....+..+.++.|.+.
T Consensus 222 -~~-~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~-~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 222 -KL-EGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEG-LERLPKLSELWLNDNKLA 290 (414)
T ss_pred -ec-cCcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccc-ccccchHHHhccCcchhc
Confidence 33 23444444 899999999999 444667888999999999999987642 344556666667777655
No 477
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.19 E-value=3.2e-10 Score=106.01 Aligned_cols=136 Identities=21% Similarity=0.237 Sum_probs=97.8
Q ss_pred ccccCCCceeEEEEEeCC-------CcEEEEEEeecccC----------------------chhhhHH----HHHHHHHh
Q 005760 398 NLIGRGSFGSVFKARLGD-------GMEVAMKVFNLQYG----------------------RVFKSFD----VECEMMKS 444 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~~~----~e~~~l~~ 444 (678)
..||.|.-+.||.|...+ +..+|||+++.... .....+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999997543 57999999864210 0112233 78888888
Q ss_pred CCC--ccceeeeeeeecCCeEEEEEEecCCCCHHH-HhhhCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEEcCCCC
Q 005760 445 IRH--RNIIKVISSCSNEEFKALVLEYMPHGSLEK-YLHSSNYILDIYQRLNIMIDVASALEYL-HFGYSAQVIHCDLKP 520 (678)
Q Consensus 445 l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dl~~ 520 (678)
+.. -++.+++++ ..-++||||+.+..+.. .++.. .++......+..+++.++..+ | +.++||+|+++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence 853 345555654 34579999997654322 22221 244556677889999999998 8 89999999999
Q ss_pred CCeeecCCCcEEEEeeccccccC
Q 005760 521 SNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 521 ~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
.||+++ ++.++++|||.+....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999987653
No 478
>PLN03150 hypothetical protein; Provisional
Probab=99.18 E-value=5.1e-11 Score=133.22 Aligned_cols=113 Identities=32% Similarity=0.436 Sum_probs=103.2
Q ss_pred CccEEecCCCcCCCCChhhhhccccccceeccccccc-cccccccccccccEEEecCCcccCCCCccccccccccccccC
Q 005760 173 ELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELT-SIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCD 251 (678)
Q Consensus 173 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~ 251 (678)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|++++.+|..+.+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~-------- 490 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLT-------- 490 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCC--------
Confidence 3789999999999999999999999999999999998 7888999999999999999999999999998888
Q ss_pred cccccEEEccCCcCCCcchHHHhcc-cCCCceecccccccccCCC
Q 005760 252 LISLISLNLSNNNLSGAIPASLEKL-SYLKDLNLSFNKLEGEIPR 295 (678)
Q Consensus 252 ~~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~~~~~~~~ 295 (678)
+|+.|+|++|++++..|..+..+ .++..+++.+|+..|..|.
T Consensus 491 --~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 491 --SLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred --CCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 99999999999999999888764 4678899999998876554
No 479
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.12 E-value=4e-09 Score=105.49 Aligned_cols=267 Identities=13% Similarity=0.121 Sum_probs=165.3
Q ss_pred CCCccccCCCceeEEEEEeCCCcEEEEEEeecccCchhhhHHHHHHHHHhC-CCccceeeee------eeec-CCeEEEE
Q 005760 395 SENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSI-RHRNIIKVIS------SCSN-EEFKALV 466 (678)
Q Consensus 395 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~------~~~~-~~~~~lv 466 (678)
...+.||+|+-+.+|-.-- -..-+.|++......... +.+.+|... .||-+-.-+. +..+ .....++
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 3467899999999995421 112345776543322112 122333333 4554332111 1122 2236788
Q ss_pred EEecCCC-CHHHHhh-----hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeecccc
Q 005760 467 LEYMPHG-SLEKYLH-----SSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK 540 (678)
Q Consensus 467 ~e~~~~~-~L~~~l~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~ 540 (678)
|+.+++. ....+.. .+-....|...++.++.++.+.+.|| ..|.+-+|+.++|+|+++++.|++.|=..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEccccee
Confidence 8887764 2222221 11124678999999999999999999 8999999999999999999999999855433
Q ss_pred ccCCCCCcceeecccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHcC-CCCCCcccCC---ccchh-hhhhc
Q 005760 541 LLTREDQSTIQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLMETFTR-KKPTDEIFNG---EMTLK-HWVND 610 (678)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~ell~g-~~p~~~~~~~---~~~~~-~~~~~ 610 (678)
.. ......-..+|...|++||... +-..+...|.|.+||++++++.| .+||.+.... ..... .....
T Consensus 166 i~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 166 IN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred ec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 32 2333445567899999999754 33456778999999999999985 8999875322 11111 01000
Q ss_pred ccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccC--cCCCCCHHHHHHHHHHHHHHHhh
Q 005760 611 WLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVES--PEQRINAKEIVTKLLKIRDSLLR 676 (678)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d--P~~Rps~~ell~~L~~~~~~~~~ 676 (678)
.+... .+ ..+.... .-..+.....++++..+..+|+... |.-||+++-++..|.++.+++..
T Consensus 243 ~f~ya-~~-~~~g~~p--~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 243 RFAYA-SD-QRRGLKP--PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred eeeec-hh-ccCCCCC--CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 00000 00 0000000 0011112345667888999999774 56899999999999999998763
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.08 E-value=1.3e-09 Score=106.55 Aligned_cols=141 Identities=18% Similarity=0.199 Sum_probs=108.7
Q ss_pred ccccCCCceeEEEEEeCCCcEEEEEEeecccC-chhhhHHHHHHHHHhCCCc--cceeeeeeeecC---CeEEEEEEecC
Q 005760 398 NLIGRGSFGSVFKARLGDGMEVAMKVFNLQYG-RVFKSFDVECEMMKSIRHR--NIIKVISSCSNE---EFKALVLEYMP 471 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~---~~~~lv~e~~~ 471 (678)
+.|+.|..+.||++...+|+.+++|....... .....+..|+++++.+++. ++.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999877778999999754322 1346788999999999753 456677776654 35689999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 005760 472 HGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGY------------------------------------------ 509 (678)
Q Consensus 472 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------ 509 (678)
|.++.+.+.. ..++......++.++++++.+||+..
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9888776532 23666777778888888888888421
Q ss_pred -----------CCCeEEcCCCCCCeeecC--CCcEEEEeecccc
Q 005760 510 -----------SAQVIHCDLKPSNVLLDD--NMVAHLSDFGIAK 540 (678)
Q Consensus 510 -----------~~~ivH~dl~~~Nill~~--~~~~kl~Dfg~~~ 540 (678)
...++|+|+.+.||+++. ++.+.++||+.+.
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 245799999999999998 6778999999875
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07 E-value=1.7e-09 Score=97.28 Aligned_cols=131 Identities=21% Similarity=0.338 Sum_probs=98.7
Q ss_pred ccccCCCceeEEEEEeCCCcEEEEEEe-ecccCc-------hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEEEe
Q 005760 398 NLIGRGSFGSVFKARLGDGMEVAMKVF-NLQYGR-------VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVLEY 469 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~~~~vavK~~-~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 469 (678)
..+++|+-+.+|.+.+. |.++++|.= ++.... ......+|+.+++.++--.|...+=++.+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999774 444666653 222111 124556799999988655555555555666777799999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccc
Q 005760 470 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 541 (678)
Q Consensus 470 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~ 541 (678)
++|..|.+.+.... ..++..+-.-+.-|| ..||+|+|++++||++..++ +.++|||++..
T Consensus 81 I~G~~lkd~l~~~~--------~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEAR--------PDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhcc--------hHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999998987652 346777778888999 99999999999999998775 99999999863
No 482
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=1.4e-10 Score=121.84 Aligned_cols=250 Identities=20% Similarity=0.155 Sum_probs=174.0
Q ss_pred HhhcCCCCCccccCCCceeEEEEEe--CCCcEEEEEEeecccCchhhhH--HHHHHHHHhC-CCccceeeeeeeecCCeE
Q 005760 389 RATDGFSENNLIGRGSFGSVFKARL--GDGMEVAMKVFNLQYGRVFKSF--DVECEMMKSI-RHRNIIKVISSCSNEEFK 463 (678)
Q Consensus 389 ~~~~~~~~~~~ig~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~--~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 463 (678)
....+|..+..||.|.|+.|+.... .++..+++|..........+++ ..|+.+...+ .|.+++.....+......
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3456788899999999999999863 3677888888754433222222 3466666655 488888887777666677
Q ss_pred EEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCC-CcEEEEeecccccc
Q 005760 464 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLL 542 (678)
Q Consensus 464 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~-~~~kl~Dfg~~~~~ 542 (678)
|+=-||++++++....... ..++...++++..|++.++.++| ++..+|+|++|+||++..+ +..+++|||.++.+
T Consensus 342 ~ip~e~~~~~s~~l~~~~~-~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTS-QMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred cCchhhhcCcchhhhhHHH-HhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccccc
Confidence 7888999999887766322 24677788899999999999999 9999999999999999875 88899999998753
Q ss_pred CCCCCcceeecccCCcccc--CccccCCCCCCccchHHHHHHHHHHHHcCCCCCCcccCCccchhhhhhcccCCcccccc
Q 005760 543 TREDQSTIQTQTLATIGYM--APEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 620 (678)
Q Consensus 543 ~~~~~~~~~~~~~~~~~y~--aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (678)
.... .......++. +|+......+..++|++|||.-+.|.+++..--.. . .+|.. +.
T Consensus 418 ~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-~------~~~~~---------i~ 476 (524)
T KOG0601|consen 418 AFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-G------VQSLT---------IR 476 (524)
T ss_pred ceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCcc-c------cccee---------ee
Confidence 2211 1122333444 55566666788999999999999999987653221 0 01100 00
Q ss_pred cCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 005760 621 DPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLLKIR 671 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ell~~L~~~~ 671 (678)
........ ....++..+.+.+..+++..||.+.++....+-.+
T Consensus 477 -~~~~p~~~-------~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 477 -SGDTPNLP-------GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred -cccccCCC-------chHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 00000000 11134667888899999999999998877665544
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.02 E-value=3.3e-09 Score=94.76 Aligned_cols=142 Identities=20% Similarity=0.266 Sum_probs=101.9
Q ss_pred CCccccCCCceeEEEEEeCCCcEEEEEE-eecccCc-------hhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEEEE
Q 005760 396 ENNLIGRGSFGSVFKARLGDGMEVAMKV-FNLQYGR-------VFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKALVL 467 (678)
Q Consensus 396 ~~~~ig~G~~g~V~~~~~~~~~~vavK~-~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 467 (678)
....+-+|+-+.|+++.+. |+..+||. +.....+ ...+..+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4568889999999999984 66666654 3332221 2356678999998876444443333444444556999
Q ss_pred EecCC-CCHHHHhhhCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC---cEEEEeeccccc
Q 005760 468 EYMPH-GSLEKYLHSSNYI-LDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM---VAHLSDFGIAKL 541 (678)
Q Consensus 468 e~~~~-~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~---~~kl~Dfg~~~~ 541 (678)
||++| .++.+++...... .+.......+..|-+.+.-|| ..+|+|+|++.+||++.+++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 5888888765432 233333678899999999999 99999999999999996544 458999999854
No 484
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=99.01 E-value=5.4e-11 Score=111.63 Aligned_cols=249 Identities=20% Similarity=0.252 Sum_probs=164.2
Q ss_pred ccCCCCCCEEecCCCccccc----CCccccCCCCCCEEEccCccCCCCccchh-----hcccccCCCCCcEEECccCCCc
Q 005760 17 IFNASKLSILELSDNSFSGF----IPNTFGNLRNLQALRLSNNYLTSSTLELS-----FLSSLSNCKSLTLISFSNNPLD 87 (678)
Q Consensus 17 ~~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~l~~n~i~~~~~~~~-----~~~~~~~l~~L~~L~L~~n~i~ 87 (678)
+..++.+++++||+|-|... +...+.+-++|+..++++-..+.....+. +.+++-+|+.|+.++||+|.+.
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 44588999999999999755 44556677999999999876655443321 2356789999999999999997
Q ss_pred ccCChhhhhcccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhh-------------ccCCCCEEE
Q 005760 88 GILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLG-------------KLQKLQGLG 154 (678)
Q Consensus 88 ~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-------------~l~~L~~L~ 154 (678)
...|.. . -+.+++-++|++|.|++|.+..+.-+.++ +-|.|++..
T Consensus 106 ~~~~e~-L---------------------~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vi 163 (388)
T COG5238 106 SEFPEE-L---------------------GDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVI 163 (388)
T ss_pred cccchH-H---------------------HHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEE
Confidence 554433 1 23345567777777777776533222222 346788888
Q ss_pred ccCCcCCCCCCC----cccCCCCccEEecCCCcCCCC--C---hhhhhccccccceecccccccc-----cccccccccc
Q 005760 155 LENNKLEGSIPD----SICHSDELYKLELGGNKLSGS--I---PECFNNLASLRILLLGSNELTS-----IPLTFWNLKD 220 (678)
Q Consensus 155 L~~n~i~~~~~~----~~~~l~~L~~L~l~~N~i~~~--~---~~~~~~l~~L~~L~l~~N~l~~-----l~~~~~~l~~ 220 (678)
..+|++...... .+..-.+|+++.+..|.|.-. . -..+..+.+|+.|||++|.++. +...++.++.
T Consensus 164 cgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~ 243 (388)
T COG5238 164 CGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNL 243 (388)
T ss_pred eccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccch
Confidence 888887632211 222225677888888877722 1 1223456788888998888873 3446778888
Q ss_pred ccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcch-----HHH--hcccCCCceecccccccc
Q 005760 221 ILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIP-----ASL--EKLSYLKDLNLSFNKLEG 291 (678)
Q Consensus 221 L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~-----~~~--~~l~~L~~L~l~~N~~~~ 291 (678)
|+.|.+..|-++.....++- ..+..-..|+|..|.+.+|-+.+... ..+ ..+|-|..|.++||.+..
T Consensus 244 lrEL~lnDClls~~G~~~v~----~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 244 LRELRLNDCLLSNEGVKSVL----RRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred hhhccccchhhccccHHHHH----HHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchh
Confidence 89999998888766654431 12223346788888888886543211 222 346777788888888764
No 485
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.99 E-value=2.1e-10 Score=126.67 Aligned_cols=250 Identities=24% Similarity=0.293 Sum_probs=168.7
Q ss_pred hhcCCCCCccccCCCceeEEEEEeC-CCcEEEEEEeecc---cCchhhhHHHHHHHHHhCCCccceeeeeeeecCCeEEE
Q 005760 390 ATDGFSENNLIGRGSFGSVFKARLG-DGMEVAMKVFNLQ---YGRVFKSFDVECEMMKSIRHRNIIKVISSCSNEEFKAL 465 (678)
Q Consensus 390 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 465 (678)
..+.+.+.+-+..|.++.++.+.-. .|.-.+.|+.... .....+....+-.+.-..++|.++.....+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4456777788889999999988632 3433333332211 11112222233333333456777776666666778899
Q ss_pred EEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCC
Q 005760 466 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 545 (678)
Q Consensus 466 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~ 545 (678)
|++|+.+++|..-++..+. .+..........+..+.+||| ...+.|+|++|.|.+...+++.+++|||.....+-.
T Consensus 882 ~~~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhHHhccCCchhhhhcCCC-cccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccc
Confidence 9999999999999987764 444444456667888999999 777999999999999999999999999843221100
Q ss_pred ---------------------C--------CcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCCCCCc
Q 005760 546 ---------------------D--------QSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKKPTDE 596 (678)
Q Consensus 546 ---------------------~--------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~p~~~ 596 (678)
. .........+|+.|.+||...+......+|+|+.|++++|.++|.+||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0 00123456799999999999999999999999999999999999999876
Q ss_pred ccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHhhccccCcCCCCCHH
Q 005760 597 IFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAMECTVESPEQRINAK 661 (678)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 661 (678)
....... +...........-+ ...+.++.+++...+..+|.+|..|.
T Consensus 1038 ~tpq~~f-----~ni~~~~~~~p~g~-------------~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQIF-----ENILNRDIPWPEGP-------------EEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchhhhh-----hccccCCCCCCCCc-------------cccChhhhhhhhhhhccCchhccCcc
Confidence 4443211 11111111111111 12334466788888899999998765
No 486
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.93 E-value=1.4e-11 Score=129.89 Aligned_cols=129 Identities=32% Similarity=0.283 Sum_probs=93.6
Q ss_pred CCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccc-cccccccccEEEec
Q 005760 149 KLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPL-TFWNLKDILYLNFS 227 (678)
Q Consensus 149 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~-~~~~l~~L~~L~l~ 227 (678)
.|.+.+.+.|++. ....++.-++.|+.|+|++|++++. +.+..|+.|++|||++|.|+.+|. ...+. +|..|.|+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeeec
Confidence 5777788888887 5667777788888888888888855 367788888888888888888875 33333 38888888
Q ss_pred CCcccCCCCccccccccccccccCcccccEEEccCCcCCCcch-HHHhcccCCCceecccccccccC
Q 005760 228 SNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIP-ASLEKLSYLKDLNLSFNKLEGEI 293 (678)
Q Consensus 228 ~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~~~~~~ 293 (678)
+|.++.. ..+.+++ +|+.|||++|-|.+-.- ..+..+..|..|+|.|||+.|.+
T Consensus 241 nN~l~tL--~gie~Lk----------sL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLK----------SLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred ccHHHhh--hhHHhhh----------hhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 8877622 2344455 88888888887764222 34556777888888888887765
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.93 E-value=7.6e-09 Score=96.51 Aligned_cols=125 Identities=25% Similarity=0.312 Sum_probs=81.9
Q ss_pred eEEEEEeCCCcEEEEEEeecccC-------------c-------------hhhhHHHHHHHHHhCCCc--cceeeeeeee
Q 005760 407 SVFKARLGDGMEVAMKVFNLQYG-------------R-------------VFKSFDVECEMMKSIRHR--NIIKVISSCS 458 (678)
Q Consensus 407 ~V~~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~e~~~l~~l~h~--niv~~~~~~~ 458 (678)
.||.|...+|..+|+|+.+.... . ......+|.+.|..+..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999988999999999864210 0 123456799999999755 455665443
Q ss_pred cCCeEEEEEEecC--CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHH-HhcCCCCCeEEcCCCCCCeeecCCCcEEEEe
Q 005760 459 NEEFKALVLEYMP--HGSLEKYLHSSNYILDIYQRLNIMIDVASALEY-LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD 535 (678)
Q Consensus 459 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~dl~~~Nill~~~~~~kl~D 535 (678)
.-.+||||++ |..+..+.... ++......++.+++..+.. +| ..|++|+|+++.||+++++ .+.++|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEe
Confidence 2359999998 54554433322 1123345677788875444 68 9999999999999999988 999999
Q ss_pred ecccccc
Q 005760 536 FGIAKLL 542 (678)
Q Consensus 536 fg~~~~~ 542 (678)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9998754
No 488
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.92 E-value=3.4e-11 Score=127.03 Aligned_cols=181 Identities=27% Similarity=0.332 Sum_probs=130.8
Q ss_pred CccccCCCCCcEEEccCCccCCcCChhhhcc-CCCCEEEccCCcCC-------CCCCCcccC---CCCccEEecCCCcCC
Q 005760 117 PEEIGNLTNLTIIYLGGNKLNGSIPSTLGKL-QKLQGLGLENNKLE-------GSIPDSICH---SDELYKLELGGNKLS 185 (678)
Q Consensus 117 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~L~~n~i~-------~~~~~~~~~---l~~L~~L~l~~N~i~ 185 (678)
|-.+..+.+|+.|.|.++.|.. . ..+.++ ..|++|.-. |.+. .-. ..+.+ ...|.+.+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~-~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascg-gd~~ns~~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-A-KGLQELRHQLEKLICH-NSLDALRHVFASCG-GDISNSPVWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh-h-hhhHHHHHhhhhhhhh-ccHHHHHHHHHHhc-cccccchhhhhHhhhhcchhhHH
Confidence 4445667777777777777652 1 112111 234444222 2211 000 11111 246889999999999
Q ss_pred CCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCccccccccccccccCcccccEEEccCCcC
Q 005760 186 GSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNL 265 (678)
Q Consensus 186 ~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l 265 (678)
....++.-++.|+.|+|++|++++.. .+..+++|++|||++|.++........+. .|+.|.|+||-+
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-----------~L~~L~lrnN~l 244 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-----------KLQLLNLRNNAL 244 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhh-----------hheeeeecccHH
Confidence 67778888999999999999999987 78899999999999999985444444332 599999999999
Q ss_pred CCcchHHHhcccCCCceeccccccccc--CCCCCccccccccccccCccccCC
Q 005760 266 SGAIPASLEKLSYLKDLNLSFNKLEGE--IPRGGSFGNFSAESFEGNELLCGS 316 (678)
Q Consensus 266 ~~~~~~~~~~l~~L~~L~l~~N~~~~~--~~~~~~~~~l~~~~~~~n~~~c~~ 316 (678)
+.. ..+.++.+|..||+++|-+.+. +...+.+..|..++++|||..|..
T Consensus 245 ~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 245 TTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred Hhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 854 3478899999999999998754 455578888999999999998853
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.90 E-value=1.1e-09 Score=82.33 Aligned_cols=59 Identities=29% Similarity=0.451 Sum_probs=29.5
Q ss_pred cccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCc
Q 005760 101 SLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNK 159 (678)
Q Consensus 101 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 159 (678)
+|++|++++|+++.+.+..|.++++|++|++++|+++.+.+++|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34455555555554444445555555555555555544444455555555555555544
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.89 E-value=1.4e-09 Score=81.82 Aligned_cols=61 Identities=34% Similarity=0.491 Sum_probs=53.6
Q ss_pred CCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcC
Q 005760 124 TNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKL 184 (678)
Q Consensus 124 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i 184 (678)
++|++|++++|+++.+.++.|.++++|++|++++|.|+...+..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5788999999999877778889999999999999999877778899999999999999875
No 491
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.83 E-value=1.5e-07 Score=97.11 Aligned_cols=167 Identities=19% Similarity=0.206 Sum_probs=125.6
Q ss_pred CceeEEEEE-eCCCcEEEEEEeecccCchhhhHHHHHHHHHhCCCccceeeeeeeec----CCeEEEEEEecCC-CCHHH
Q 005760 404 SFGSVFKAR-LGDGMEVAMKVFNLQYGRVFKSFDVECEMMKSIRHRNIIKVISSCSN----EEFKALVLEYMPH-GSLEK 477 (678)
Q Consensus 404 ~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-~~L~~ 477 (678)
-..+.|++. ..||..+++|++.............-+++++++.|+|+|++-+++.. +..+++|++|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 346789996 45899999999943333333334456889999999999999988752 4477899999876 57776
Q ss_pred Hhhh--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccC
Q 005760 478 YLHS--------------SNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 543 (678)
Q Consensus 478 ~l~~--------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~ 543 (678)
.-.. .+...++...|.++.|+..||.++| +.|...+-+.+.+|+++.+.+++|+..|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 5421 1224667899999999999999999 9999999999999999999999998887765543
Q ss_pred CCCCcceeecccCCccccCccccCCCCCCccchHHHHHHHHHHHHcCCC
Q 005760 544 REDQSTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLMETFTRKK 592 (678)
Q Consensus 544 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell~g~~ 592 (678)
.... |.+.+ -.+-|.=.||.++..|.||..
T Consensus 445 ~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT----------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC----------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 3220 11111 124689999999999999854
No 492
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=7e-10 Score=105.61 Aligned_cols=218 Identities=16% Similarity=0.115 Sum_probs=132.2
Q ss_pred cCCccccCCCCCCEEecCCCcccccCC-cccc-CCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCCccc
Q 005760 12 TIPRFIFNASKLSILELSDNSFSGFIP-NTFG-NLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPLDGI 89 (678)
Q Consensus 12 ~~p~~~~~l~~L~~L~l~~n~i~~~~~-~~~~-~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~ 89 (678)
..|-.++.+.-++.|.+.++.|..+.- ..|+ ....+++|||..|+|++-+ +++.-+.++|.|++|+|+.|++...
T Consensus 36 ~s~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWs---eI~~ile~lP~l~~LNls~N~L~s~ 112 (418)
T KOG2982|consen 36 LSYLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWS---EIGAILEQLPALTTLNLSCNSLSSD 112 (418)
T ss_pred cceeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHH---HHHHHHhcCccceEeeccCCcCCCc
Confidence 334334444556677888888874421 1222 3578899999999987654 3455678899999999999998755
Q ss_pred CChhhhhcccccccEEEccccccccc-CCccccCCCCCcEEEccCCccCC--cCChhhhcc-CCCCEEEccCCcCCCC--
Q 005760 90 LPKTSVGNLSHSLEYFEMAYCNVSGG-IPEEIGNLTNLTIIYLGGNKLNG--SIPSTLGKL-QKLQGLGLENNKLEGS-- 163 (678)
Q Consensus 90 ~~~~~~~~l~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l-~~L~~L~L~~n~i~~~-- 163 (678)
+... ...+ .+|+.|.|++..+.-. ....+..+|.+++|.+|.|.+.- ...+..... +.+++|.+..|.....
T Consensus 113 I~~l-p~p~-~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~ 190 (418)
T KOG2982|consen 113 IKSL-PLPL-KNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLN 190 (418)
T ss_pred cccC-cccc-cceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHH
Confidence 4321 1112 3788888888887733 33456778888888888885431 111111111 2344444444443210
Q ss_pred CCCcccCCCCccEEecCCCcCCCCC-hhhhhccccccceeccccccccccc--cccccccccEEEecCCcccCC
Q 005760 164 IPDSICHSDELYKLELGGNKLSGSI-PECFNNLASLRILLLGSNELTSIPL--TFWNLKDILYLNFSSNFFTGP 234 (678)
Q Consensus 164 ~~~~~~~l~~L~~L~l~~N~i~~~~-~~~~~~l~~L~~L~l~~N~l~~l~~--~~~~l~~L~~L~l~~N~l~~~ 234 (678)
....-...|++..+.+..|.+.... .+.+..++.+..|+|+.|+|.+... .+.++++|..|.+++|++...
T Consensus 191 ~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~ 264 (418)
T KOG2982|consen 191 KNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDP 264 (418)
T ss_pred HHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccccc
Confidence 0011112356777777777776432 2445556677777888887776644 567777777777777776533
No 493
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.79 E-value=9.3e-09 Score=117.67 Aligned_cols=202 Identities=21% Similarity=0.267 Sum_probs=125.3
Q ss_pred CCCCCCEEecCCCcccccCCccccCCCCCCEEEccCcc--CCCCccchhhcccccCCCCCcEEECccCCCcccCChhhhh
Q 005760 19 NASKLSILELSDNSFSGFIPNTFGNLRNLQALRLSNNY--LTSSTLELSFLSSLSNCKSLTLISFSNNPLDGILPKTSVG 96 (678)
Q Consensus 19 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~--i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 96 (678)
+...++.+.+.+|++. .+++...+ ++|++|-+..|. +..++.. -|..++.|++|||++|.=.+-.|.. ++
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~-----ff~~m~~LrVLDLs~~~~l~~LP~~-I~ 592 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGE-----FFRSLPLLRVLDLSGNSSLSKLPSS-IG 592 (889)
T ss_pred chhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHH-----HHhhCcceEEEECCCCCccCcCChH-Hh
Confidence 3466778888888776 34444433 378888888885 5555543 2677888888888877655555554 66
Q ss_pred cccccccEEEcccccccccCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCC--CCCCCcccCCCCc
Q 005760 97 NLSHSLEYFEMAYCNVSGGIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLE--GSIPDSICHSDEL 174 (678)
Q Consensus 97 ~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~--~~~~~~~~~l~~L 174 (678)
.+- +|++|+|++..+. .+|..+.+|..|.+||+..+.-...+|+....+.+|++|.+..-... ...-..+..+.+|
T Consensus 593 ~Li-~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L 670 (889)
T KOG4658|consen 593 ELV-HLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHL 670 (889)
T ss_pred hhh-hhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccch
Confidence 666 7777888877777 66777777888888888776654455666667778887777665422 1122334444555
Q ss_pred cEEecCCCcCCCCChhhhhccccc----cceeccccccccccccccccccccEEEecCCccc
Q 005760 175 YKLELGGNKLSGSIPECFNNLASL----RILLLGSNELTSIPLTFWNLKDILYLNFSSNFFT 232 (678)
Q Consensus 175 ~~L~l~~N~i~~~~~~~~~~l~~L----~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~ 232 (678)
+.+........ .-..+..++.| +.+.+..+.....+..+..+.+|+.|.+.++.+.
T Consensus 671 ~~ls~~~~s~~--~~e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 671 ENLSITISSVL--LLEDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred hhheeecchhH--hHhhhhhhHHHHHHhHhhhhcccccceeecccccccCcceEEEEcCCCc
Confidence 55554333220 11112222222 3444444455555667778888888888888875
No 494
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.78 E-value=8.9e-08 Score=95.01 Aligned_cols=139 Identities=15% Similarity=0.105 Sum_probs=98.4
Q ss_pred ccccCCCceeEEEEEeCCCcEEEEEEeecccC-c----------hhhhHHHHHHHHHhCCCccc--eeeeeeeec-----
Q 005760 398 NLIGRGSFGSVFKARLGDGMEVAMKVFNLQYG-R----------VFKSFDVECEMMKSIRHRNI--IKVISSCSN----- 459 (678)
Q Consensus 398 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~----------~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~----- 459 (678)
+.+-+.....|+++.. +|+.+.||....... + ....+.+|...+..+...+| ...+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444455777766 678899997743221 0 11136789998888753333 233444432
Q ss_pred CCeEEEEEEecCCC-CHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecC-------CCc
Q 005760 460 EEFKALVLEYMPHG-SLEKYLHSS-NYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDD-------NMV 530 (678)
Q Consensus 460 ~~~~~lv~e~~~~~-~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~-------~~~ 530 (678)
....++|||++++. +|.+++... ....+......++.+++..+.-|| ..||+|+|++++|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 23467999999886 899988532 223456677789999999999999 999999999999999975 568
Q ss_pred EEEEeecccc
Q 005760 531 AHLSDFGIAK 540 (678)
Q Consensus 531 ~kl~Dfg~~~ 540 (678)
+.++||+.+.
T Consensus 184 ~~LIDl~r~~ 193 (268)
T PRK15123 184 LSVIDLHRAQ 193 (268)
T ss_pred EEEEECCccc
Confidence 9999999875
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.76 E-value=8.1e-10 Score=93.22 Aligned_cols=134 Identities=22% Similarity=0.192 Sum_probs=84.7
Q ss_pred CCEEEccCCcCCCCCCCc---ccCCCCccEEecCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEe
Q 005760 150 LQGLGLENNKLEGSIPDS---ICHSDELYKLELGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNF 226 (678)
Q Consensus 150 L~~L~L~~n~i~~~~~~~---~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l 226 (678)
+..++|+++.+- .+++. +....+|+..+|++|.+.+..+..-...+.++.|+|++|+|+++|..+..++.|+.|++
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNL 107 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhccc
Confidence 444555555554 33332 23345566667777777744444444556777788888888888877777788888888
Q ss_pred cCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcchHHHhcccCCCceecccccccccCCCC
Q 005760 227 SSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIPASLEKLSYLKDLNLSFNKLEGEIPRG 296 (678)
Q Consensus 227 ~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 296 (678)
+.|++. ..|..+..+. +|-.|+..+|.+..+.-+ +-.-+.....++.+++|.+.++..
T Consensus 108 ~~N~l~-~~p~vi~~L~----------~l~~Lds~~na~~eid~d-l~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 108 RFNPLN-AEPRVIAPLI----------KLDMLDSPENARAEIDVD-LFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred ccCccc-cchHHHHHHH----------hHHHhcCCCCccccCcHH-HhccccHHHHHhcCCcccccCccc
Confidence 888777 4555555566 777888888877744334 222233444566788888777664
No 496
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.75 E-value=5.8e-08 Score=92.81 Aligned_cols=135 Identities=21% Similarity=0.196 Sum_probs=97.7
Q ss_pred CCCCccccCCCceeEEEEEeCCCcEEEEEEeeccc-------------------C---chhhhHHHHHHHHHhCCCc--c
Q 005760 394 FSENNLIGRGSFGSVFKARLGDGMEVAMKVFNLQY-------------------G---RVFKSFDVECEMMKSIRHR--N 449 (678)
Q Consensus 394 ~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~-------------------~---~~~~~~~~e~~~l~~l~h~--n 449 (678)
+.++..||-|.-+.||.|..++|.++|||.=+... + -.+....+|.++|..|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45668999999999999999999999999743210 0 0123456789999988654 5
Q ss_pred ceeeeeeeecCCeEEEEEEecCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCC
Q 005760 450 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNM 529 (678)
Q Consensus 450 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~ 529 (678)
+.+.+++ +.-.+||||++|-.|...-- +......++..|+.-+.-+- ..||||+|+++.||+++++|
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~------~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL------DVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC------cccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCC
Confidence 6555554 34569999999866654331 22233345555565555555 68899999999999999999
Q ss_pred cEEEEeeccccc
Q 005760 530 VAHLSDFGIAKL 541 (678)
Q Consensus 530 ~~kl~Dfg~~~~ 541 (678)
.+.++||--+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999976654
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.75 E-value=3.6e-09 Score=100.84 Aligned_cols=208 Identities=19% Similarity=0.151 Sum_probs=121.9
Q ss_pred CCcEEECccCCCcccCChhhhhcccccccEEEcccccccc--cCCccccCCCCCcEEEccCCccCCcCChhhhccCCCCE
Q 005760 75 SLTLISFSNNPLDGILPKTSVGNLSHSLEYFEMAYCNVSG--GIPEEIGNLTNLTIIYLGGNKLNGSIPSTLGKLQKLQG 152 (678)
Q Consensus 75 ~L~~L~L~~n~i~~~~~~~~~~~l~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 152 (678)
.++.|.+.++.|........++.....+++|||..|.|++ .+..-+.++|.|++|+|+.|.+.+.+...-..+.+|++
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 4445566666665555544455544456666666666662 23344567788888888888876433222135567888
Q ss_pred EEccCCcCCC-CCCCcccCCCCccEEecCCCcCCCCC--hhhhhcc-ccccceeccccccccc---cccccccccccEEE
Q 005760 153 LGLENNKLEG-SIPDSICHSDELYKLELGGNKLSGSI--PECFNNL-ASLRILLLGSNELTSI---PLTFWNLKDILYLN 225 (678)
Q Consensus 153 L~L~~n~i~~-~~~~~~~~l~~L~~L~l~~N~i~~~~--~~~~~~l-~~L~~L~l~~N~l~~l---~~~~~~l~~L~~L~ 225 (678)
|.|.+..+.- .....+..+|.++.|+++.|.+.... .+..... +.+.+|+...|....- -.--.-.|++..+-
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~ 205 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVF 205 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchhee
Confidence 8877777642 12334566777777777777443211 1111111 2444444444433211 11112345777777
Q ss_pred ecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCcch-HHHhcccCCCceecccccccc
Q 005760 226 FSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGAIP-ASLEKLSYLKDLNLSFNKLEG 291 (678)
Q Consensus 226 l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~~~~ 291 (678)
+..|++....... .+-.+|.+.-|+|+.|+|.+... +++.+++.|..|.+++||+..
T Consensus 206 v~e~PlK~~s~ek---------~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 206 VCEGPLKTESSEK---------GSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred eecCcccchhhcc---------cCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 8888776444321 11245578889999999875433 677888999999999998763
No 498
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.61 E-value=1.4e-08 Score=108.25 Aligned_cols=150 Identities=17% Similarity=0.252 Sum_probs=102.2
Q ss_pred HHHHHHHHHHhcCCCCCeEEcCCCCCCeeecCCCcEEEEeeccccccCCCCC-----cc--eeecccCCccccCccccCC
Q 005760 496 IDVASALEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDQ-----ST--IQTQTLATIGYMAPEYGKE 568 (678)
Q Consensus 496 ~~i~~~l~~LH~~~~~~ivH~dl~~~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~--~~~~~~~~~~y~aPE~~~~ 568 (678)
.+++.|+.|+|. +.++||++|.|++|.++.++..||+.|+++........ +. ..........|.|||++..
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 345599999996 78999999999999999999999999999865433111 00 1111224567999999999
Q ss_pred CCCCccchHHHHHHHHHHHHcCCCC-CCcccCCccchhhhhhcccCCcccccccCccCCccchhhHHHHHHHHHHHHHHh
Q 005760 569 GRVSANGDVYSFGIMLMETFTRKKP-TDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDINFVAKEQCVSFVFNVAM 647 (678)
Q Consensus 569 ~~~~~~~DvwslGv~l~ell~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 647 (678)
...+.++|+||+||++|-+..|..+ +.. ........ ... . . .+...+....+.++++.+=+.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a-~~~~~~~~-~~~--~-------~------~~~~~~~~s~~~p~el~~~l~ 246 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAA-NGGLLSYS-FSR--N-------L------LNAGAFGYSNNLPSELRESLK 246 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhc-cCCcchhh-hhh--c-------c------cccccccccccCcHHHHHHHH
Confidence 8889999999999999999855544 332 11111110 000 0 0 000011111345677889999
Q ss_pred hccccCcCCCCCHHHHH
Q 005760 648 ECTVESPEQRINAKEIV 664 (678)
Q Consensus 648 ~cl~~dP~~Rps~~ell 664 (678)
+++..++..||++.++.
T Consensus 247 k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 247 KLLNGDSAVRPTLDLLL 263 (700)
T ss_pred HHhcCCcccCcchhhhh
Confidence 99999999999777664
No 499
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.61 E-value=3.2e-08 Score=113.31 Aligned_cols=205 Identities=21% Similarity=0.229 Sum_probs=135.1
Q ss_pred CCCCCCEEEccCccCCCCccchhhcccccCCCCCcEEECccCCC-cccCChhhhhcccccccEEEcccccccccCCcccc
Q 005760 43 NLRNLQALRLSNNYLTSSTLELSFLSSLSNCKSLTLISFSNNPL-DGILPKTSVGNLSHSLEYFEMAYCNVSGGIPEEIG 121 (678)
Q Consensus 43 ~l~~L~~L~l~~n~i~~~~~~~~~~~~~~~l~~L~~L~L~~n~i-~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~ 121 (678)
+....+.+.+-+|.+..++.. ..++.|++|-+.+|.- ...++..+|..++ .|+.|||++|.-.+.+|+.++
T Consensus 521 ~~~~~rr~s~~~~~~~~~~~~-------~~~~~L~tLll~~n~~~l~~is~~ff~~m~-~LrVLDLs~~~~l~~LP~~I~ 592 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIEHIAGS-------SENPKLRTLLLQRNSDWLLEISGEFFRSLP-LLRVLDLSGNSSLSKLPSSIG 592 (889)
T ss_pred chhheeEEEEeccchhhccCC-------CCCCccceEEEeecchhhhhcCHHHHhhCc-ceEEEECCCCCccCcCChHHh
Confidence 346778888888888877754 3556788998888862 2345555566676 888889988888888888888
Q ss_pred CCCCCcEEEccCCccCCcCChhhhccCCCCEEEccCCcCCCCCCCcccCCCCccEEecCCCcCC--CCChhhhhcccccc
Q 005760 122 NLTNLTIIYLGGNKLNGSIPSTLGKLQKLQGLGLENNKLEGSIPDSICHSDELYKLELGGNKLS--GSIPECFNNLASLR 199 (678)
Q Consensus 122 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~i~--~~~~~~~~~l~~L~ 199 (678)
.|-+|++|++++..++ .+|..+.+|..|.+|++..+.-...+|.....+.+|++|.+..-... ...-..+..+++|+
T Consensus 593 ~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~ 671 (889)
T KOG4658|consen 593 ELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLE 671 (889)
T ss_pred hhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchh
Confidence 8888888888888887 78888888888888888888866566777777888888888665422 22333445555666
Q ss_pred ceecccccccccccccccccccc----EEEecCCcccCCCCccccccccccccccCcccccEEEccCCcCCCc
Q 005760 200 ILLLGSNELTSIPLTFWNLKDIL----YLNFSSNFFTGPLPLEIGNLKIARIDSCDLISLISLNLSNNNLSGA 268 (678)
Q Consensus 200 ~L~l~~N~l~~l~~~~~~l~~L~----~L~l~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L~~N~l~~~ 268 (678)
.+....... .+-..+..+..|. .+.+.++... ..+..+.. +.+|+.|.+.++.++..
T Consensus 672 ~ls~~~~s~-~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~----------l~~L~~L~i~~~~~~e~ 732 (889)
T KOG4658|consen 672 NLSITISSV-LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGS----------LGNLEELSILDCGISEI 732 (889)
T ss_pred hheeecchh-HhHhhhhhhHHHHHHhHhhhhcccccc-eeeccccc----------ccCcceEEEEcCCCchh
Confidence 666544433 2211222222222 2222222211 22223333 33888888888887643
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.60 E-value=2.7e-09 Score=90.09 Aligned_cols=136 Identities=18% Similarity=0.262 Sum_probs=84.0
Q ss_pred ccEEEccccccccc--CCccccCCCCCcEEEccCCccCCcCChhhh-ccCCCCEEEccCCcCCCCCCCcccCCCCccEEe
Q 005760 102 LEYFEMAYCNVSGG--IPEEIGNLTNLTIIYLGGNKLNGSIPSTLG-KLQKLQGLGLENNKLEGSIPDSICHSDELYKLE 178 (678)
Q Consensus 102 L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 178 (678)
+-.++|++|++-.+ .+..+.....|+..+|++|.+. .+|..|. .++-+++|+|++|.|+ .+|..+..+|.|+.|+
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 44555666655421 1222344566667788888877 4555554 3457777788888877 5666677777777777
Q ss_pred cCCCcCCCCChhhhhccccccceeccccccccccccccccccccEEEecCCcccCCCCcccc
Q 005760 179 LGGNKLSGSIPECFNNLASLRILLLGSNELTSIPLTFWNLKDILYLNFSSNFFTGPLPLEIG 240 (678)
Q Consensus 179 l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~l~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 240 (678)
++.|.+. ..|..+..+.+|-.|+..+|.+..+|-++..-.++-..++.++++.+..+....
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~~~~~klq 167 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGDETKKKLQ 167 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccccCccccc
Confidence 7777777 556666667777777777777777765433222233333455566555554433
Done!