Your job contains 1 sequence.
>005761
MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQ
NRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLTRMEGFSA
KIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGE
DGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKG
NIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMN
SLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKI
PIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKL
LMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVL
QCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLK
ESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLH
WGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAAD
KNLASRIVKAMENILEGI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005761
(678 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079696 - symbol:AT3G07530 "AT3G07530" species... 1789 2.0e-184 1
ZFIN|ZDB-GENE-061013-129 - symbol:ints9 "integrator compl... 321 4.5e-49 2
UNIPROTKB|Q9NV88 - symbol:INTS9 "Integrator complex subun... 334 8.6e-49 2
UNIPROTKB|Q2KJA6 - symbol:INTS9 "Integrator complex subun... 331 1.9e-48 2
UNIPROTKB|F6XI08 - symbol:INTS9 "Uncharacterized protein"... 330 2.5e-48 2
UNIPROTKB|F1MMA6 - symbol:INTS9 "Integrator complex subun... 329 3.3e-48 2
MGI|MGI:1098533 - symbol:Ints9 "integrator complex subuni... 328 5.5e-48 2
UNIPROTKB|Q5ZKK2 - symbol:INTS9 "Integrator complex subun... 323 6.2e-48 2
RGD|1311539 - symbol:Ints9 "integrator complex subunit 9"... 326 2.0e-47 2
UNIPROTKB|G3XAN1 - symbol:INTS9 "Integrator complex subun... 309 1.4e-46 2
UNIPROTKB|F1RJQ5 - symbol:INTS9 "Uncharacterized protein"... 330 1.2e-44 2
FB|FBgn0036570 - symbol:IntS9 "Integrator 9" species:7227... 292 4.1e-43 2
UNIPROTKB|H7BYQ6 - symbol:INTS9 "Integrator complex subun... 334 1.4e-42 2
DICTYBASE|DDB_G0282473 - symbol:ints9 "integrator complex... 270 1.1e-36 3
UNIPROTKB|E2QVB2 - symbol:INTS9 "Uncharacterized protein"... 330 4.7e-29 1
WB|WBGene00017608 - symbol:F19F10.12 species:6239 "Caenor... 226 1.0e-27 2
UNIPROTKB|E5RG70 - symbol:INTS9 "Integrator complex subun... 176 4.3e-16 2
UNIPROTKB|H0YBH8 - symbol:INTS9 "Integrator complex subun... 133 2.7e-13 2
UNIPROTKB|E5RK47 - symbol:INTS9 "Integrator complex subun... 160 1.0e-10 1
UNIPROTKB|E1B7Q9 - symbol:CPSF3L "Integrator complex subu... 115 3.1e-07 4
UNIPROTKB|F1NV30 - symbol:CPSF3L "Integrator complex subu... 116 9.3e-07 4
UNIPROTKB|Q5ZIH0 - symbol:CPSF3L "Integrator complex subu... 116 9.3e-07 4
ZFIN|ZDB-GENE-050522-13 - symbol:cpsf3l "cleavage and pol... 114 2.4e-06 4
MGI|MGI:1919207 - symbol:Cpsf3l "cleavage and polyadenyla... 120 8.7e-06 3
RGD|1306841 - symbol:Cpsf3l "cleavage and polyadenylation... 120 8.7e-06 3
UNIPROTKB|Q5TA45 - symbol:CPSF3L "Integrator complex subu... 120 1.7e-05 3
UNIPROTKB|G3V1S5 - symbol:CPSF3L "Integrator complex subu... 120 1.8e-05 3
UNIPROTKB|E2QY53 - symbol:CPSF3L "Uncharacterized protein... 116 4.5e-05 3
UNIPROTKB|Q2YDM2 - symbol:CPSF3L "Integrator complex subu... 115 4.6e-05 3
FB|FBgn0039691 - symbol:IntS11 "Integrator 11" species:72... 100 5.5e-05 4
UNIPROTKB|F1RJE8 - symbol:CPSF3L "Uncharacterized protein... 115 5.8e-05 3
TAIR|locus:2172843 - symbol:CPSF100 "cleavage and polyade... 88 0.00011 3
FB|FBgn0027873 - symbol:Cpsf100 "Cleavage and polyadenyla... 86 0.00062 3
WB|WBGene00017313 - symbol:cpsf-2 species:6239 "Caenorhab... 82 0.00092 3
UNIPROTKB|O17403 - symbol:cpsf-2 "Probable cleavage and p... 82 0.00092 3
>TAIR|locus:2079696 [details] [associations]
symbol:AT3G07530 "AT3G07530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR027074 EMBL:CP002686 InterPro:IPR022712
Pfam:PF10996 SMART:SM01027 KO:K13146 PANTHER:PTHR11203:SF2
IPI:IPI00520313 RefSeq:NP_187409.2 UniGene:At.53215
ProteinModelPortal:F4JEH2 PRIDE:F4JEH2 EnsemblPlants:AT3G07530.1
GeneID:819942 KEGG:ath:AT3G07530 OMA:CYNGTLI Uniprot:F4JEH2
Length = 699
Score = 1789 (634.8 bits), Expect = 2.0e-184, P = 2.0e-184
Identities = 345/699 (49%), Positives = 472/699 (67%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPN----DFYKAICKEN 56
M+ TCL +G GF++PPCH+LN+ GF +L DCPLDLSA+ +FSP+P+ + + + E+
Sbjct: 1 MELTCLSKGDGFHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVPSGVGSEASEYLSDES 60
Query: 57 SDSQN----RQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFL 112
D+QN +QK+E+ L DL+ EPWYKTV LHLW SFID+VLIS+PMG+LGLPFL
Sbjct: 61 LDAQNPIQKKQKLERQLTCADLVCEEPWYKTVKALHLWEASFIDIVLISNPMGLLGLPFL 120
Query: 113 TRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSA 172
T+ GF AKIY+TE A+IGQLMME+++ M+ E+R F+G + SS P W+K + E +P+
Sbjct: 121 TQNPGFFAKIYMTEVTAKIGQLMMEDIVSMHKEFRCFHGPDNSSFPGWIKNLDSEQVPAL 180
Query: 173 LRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGA 230
L+K+ GE G +LG + ++ C+ KVQ ++F EE CYNG LIIKA SSGLDIGA
Sbjct: 181 LKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQGVKFAEEVCYNGTLIIKALSSGLDIGA 240
Query: 231 CNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGXXXXXXXXXXXXXXXXXXXQSSFS- 289
CNW+I+G G+++Y+S S F S HA FD+ ++ S
Sbjct: 241 CNWLINGPNGSLSYVSDSIFVSHHARSFDFHGLKETDVLIYSDFSSLQSAEVTEDGCISP 300
Query: 290 DDNNNW----EELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 345
D +NN+ + +SL N ++S+EEMEKLAF+CSCA +S AGGS LI I R+G+ LQL
Sbjct: 301 DSDNNYISTISDNKDSLLNTEDSLEEMEKLAFVCSCAAESADAGGSTLITITRIGIVLQL 360
Query: 346 LEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIK 405
LE ++ +E SSLK+PI++ISSVAEELLAYTNTIPEWLC+QRQEKL SG+P F H+K IK
Sbjct: 361 LELLSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQRQEKLISGEPSFGHLKFIK 420
Query: 406 EKKIHVFPAVHSPKLLM----NWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN 461
KKIH+FPA+HSP L+ +WQEPCIVF+ HWSLRLGP++ LL+RW GD SLLVLE+
Sbjct: 421 NKKIHLFPAIHSPNLIYANRTSWQEPCIVFASHWSLRLGPSVQLLQRWRGDPKSLLVLED 480
Query: 462 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRXXXXXXXXX 521
+ + L +LPF+PI+MK+LQCSFLSG +LQK+ L+ +LQPK+ L P+
Sbjct: 481 GISSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLVSVLQPKIFLVPDAVNQRISLAAIK 540
Query: 522 XXXXXXYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLKGRLFVNHGK 580
Y EN+T+H+P + ++ +EI D+ASK WR L+Q++ I RLKG L + GK
Sbjct: 541 TISILNYFENKTLHVPRIVDNPSVEITTDLASKLSWRKLRQRESFGIARLKGGLLMEDGK 600
Query: 581 HQLLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKV 639
H+L+ E SS + RP HWGS PE LL L KMGI GS+E+ D SED + +
Sbjct: 601 HRLVSGLEQEESSGKARPLRHWGSVAPELLLDALLKMGIKGSIEQSTGDNGSEDKSIIHI 660
Query: 640 QDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 678
++P +IE T I D+N+ S++ +A++ +L+GI
Sbjct: 661 ENPNSGLIEFSEMGTAIITGDENVVSQVFQAIDGVLDGI 699
>ZFIN|ZDB-GENE-061013-129 [details] [associations]
symbol:ints9 "integrator complex subunit 9"
species:7955 "Danio rerio" [GO:0016180 "snRNA processing"
evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA]
InterPro:IPR027074 ZFIN:ZDB-GENE-061013-129 eggNOG:COG1236
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 CTD:55756
HOGENOM:HOG000045359 HOVERGEN:HBG081802 KO:K13146 OrthoDB:EOG415GCW
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445
EMBL:CABZ01076623 EMBL:CABZ01078246 EMBL:CABZ01078247
EMBL:CABZ01078248 EMBL:CABZ01078249 EMBL:BC124793 IPI:IPI00800641
RefSeq:NP_001070738.1 UniGene:Dr.116109 Ensembl:ENSDART00000097865
GeneID:768124 KEGG:dre:768124 InParanoid:Q08BB6 NextBio:20918446
Uniprot:Q08BB6
Length = 658
Score = 321 (118.1 bits), Expect = 4.5e-49, Sum P(2) = 4.5e-49
Identities = 67/199 (33%), Positives = 110/199 (55%)
Query: 315 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELL 373
L CS +V+AGG+VL+P GV LLE + FM+ ++L P Y IS VA L
Sbjct: 278 LGEFCSNLAMTVRAGGNVLVPCYSSGVIYDLLECLYQFMDSANLGTTPFYFISPVANSSL 337
Query: 374 AYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 433
++ EWLC+ +Q K++ +P F H +LI+ K+ +P++H +++PC+VF+
Sbjct: 338 EFSQIFAEWLCQNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHGD-FSSEFRQPCVVFTG 396
Query: 434 HWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQK 492
H SLR G +H + W N+++ E + A+ P++P++MK + C + +
Sbjct: 397 HPSLRFGDVVHFMELWGKSSLNTIIFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFHQ 456
Query: 493 VQPLLKILQPKLVLFPEEW 511
V LLK +QP V+ PE +
Sbjct: 457 VSKLLKDIQPLHVVCPEPY 475
Score = 267 (99.0 bits), Expect = 4.5e-49, Sum P(2) = 4.5e-49
Identities = 78/271 (28%), Positives = 127/271 (46%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICK-----E 55
MK CL G PC++L ++ DC LD +A F PLP + K
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDTTAALYFLPLPLVHSPRLSKLPGWVS 57
Query: 56 NSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLTRM 115
+ N +K K + ++P + + L ++S IDV+LIS+ M+ LP++T
Sbjct: 58 KDGAINLEKELKECSGRVFVDSQPEF-CLPEKELLDLSTIDVILISNYHCMMALPYITEH 116
Query: 116 EGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRK 175
GF+ +Y TE +IG+L+MEEL+ ME + A +S W E LLP L+
Sbjct: 117 TGFTGTVYATEPTLQIGRLLMEELVAF-ME--RVPKAHAASC--WKNKEIQRLLPGPLK- 170
Query: 176 IALGEDGSELGGGCPC--IAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNW 233
D E+ C + V +SKVQ + + ++ G + + SSG +G+ NW
Sbjct: 171 -----DAVEVWSWSKCYSLQEVNSALSKVQLVGYSQKVELFGAVQVTPLSSGYSLGSSNW 225
Query: 234 IISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
II ++Y+SGS+ + H + +++
Sbjct: 226 IIQSHYEKVSYVSGSSLLTTHPQPMEQSSLK 256
>UNIPROTKB|Q9NV88 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
[GO:0016180 "snRNA processing" evidence=IDA] [GO:0032039
"integrator complex" evidence=IDA] InterPro:IPR027074
eggNOG:COG1236 InterPro:IPR022712 Pfam:PF10996 SMART:SM01027
GO:GO:0032039 EMBL:U96629 GO:GO:0016180 CTD:55756
HOGENOM:HOG000045359 HOVERGEN:HBG081802 KO:K13146 OrthoDB:EOG415GCW
PANTHER:PTHR11203:SF2 OMA:PLAMKCV EMBL:AK001733 EMBL:AK298468
EMBL:AK300593 EMBL:AC040975 EMBL:AC131969 EMBL:BC025267
EMBL:BK005726 EMBL:BK005674 IPI:IPI00290514 IPI:IPI00871167
RefSeq:NP_001138631.1 RefSeq:NP_001166033.1 RefSeq:NP_060720.2
UniGene:Hs.162397 ProteinModelPortal:Q9NV88 SMR:Q9NV88
IntAct:Q9NV88 STRING:Q9NV88 PhosphoSite:Q9NV88 DMDM:119371246
PaxDb:Q9NV88 PRIDE:Q9NV88 DNASU:55756 Ensembl:ENST00000416984
Ensembl:ENST00000521022 Ensembl:ENST00000521777 GeneID:55756
KEGG:hsa:55756 UCSC:uc003xha.3 GeneCards:GC08M028625
HGNC:HGNC:25592 MIM:611352 neXtProt:NX_Q9NV88 PharmGKB:PA162392192
InParanoid:Q9NV88 PhylomeDB:Q9NV88 ChiTaRS:INTS9 GenomeRNAi:55756
NextBio:60763 ArrayExpress:Q9NV88 Bgee:Q9NV88 CleanEx:HS_INTS9
Genevestigator:Q9NV88 GermOnline:ENSG00000104299 Uniprot:Q9NV88
Length = 658
Score = 334 (122.6 bits), Expect = 8.6e-49, Sum P(2) = 8.6e-49
Identities = 92/351 (26%), Positives = 168/351 (47%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS VA L ++
Sbjct: 282 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQ 341
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 342 IFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHGD-FSNDFRQPCVVFTGHPSL 400
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 401 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 460
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 461 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 520
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENL 609
++A +K +++ + L KH L P P + + P+
Sbjct: 521 ELADSLVPMEIKPG-ISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-- 577
Query: 610 LAELSKMGINGS--VERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
++ K ++GS VE+ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 578 -CKVLKPLLSGSIPVEQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 626
Score = 250 (93.1 bits), Expect = 8.6e-49, Sum P(2) = 8.6e-49
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
MK CL G PC++L ++ DC LD+++ F PLP ++ N
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGW 55
Query: 57 SDSQNRQKVEKPL-DANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
S ++K L + + +F + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 56 SLKDGNAFLDKELKECSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSAL 173
GF+ +Y TE +IG+L+MEEL+ N R + S W + LLPS L
Sbjct: 115 EHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPL 169
Query: 174 RKIALGEDGSELGGG--CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGAC 231
+ D E+ C + V +SK+Q + + ++ G + + SSG +G+
Sbjct: 170 K------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSS 223
Query: 232 NWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
NWII ++Y+SGS+ + H D +++
Sbjct: 224 NWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 256
>UNIPROTKB|Q2KJA6 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9913
"Bos taurus" [GO:0032039 "integrator complex" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] InterPro:IPR027074
GO:GO:0005634 eggNOG:COG1236 InterPro:IPR022712 Pfam:PF10996
SMART:SM01027 EMBL:BC105437 IPI:IPI00701634 RefSeq:NP_001039828.1
UniGene:Bt.91042 ProteinModelPortal:Q2KJA6 STRING:Q2KJA6
GeneID:533964 KEGG:bta:533964 CTD:55756 HOGENOM:HOG000045359
HOVERGEN:HBG081802 InParanoid:Q2KJA6 KO:K13146 OrthoDB:EOG415GCW
NextBio:20876211 PANTHER:PTHR11203:SF2 Uniprot:Q2KJA6
Length = 658
Score = 331 (121.6 bits), Expect = 1.9e-48, Sum P(2) = 1.9e-48
Identities = 97/356 (27%), Positives = 171/356 (48%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS VA L ++
Sbjct: 282 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQ 341
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 342 IFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSIHGD-FSNDFRQPCVVFTGHPSL 400
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 401 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 460
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 461 LKEVQPLHVVCPEQYTQPTPAQSHRMDLMVDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 520
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEP----GGSSQTRPFLHWGSPD 605
++A +K +++ + L KH L P P GG + R S D
Sbjct: 521 ELADSLVPMEIKPG-ISLATVSAVLHTKDNKHVLQPPPRPTQPTGGKKRKR-----ASDD 574
Query: 606 -PENLLAELSKMGINGS--VERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
P+ ++ K ++GS V++ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 575 IPD---CKVLKPLLSGSIPVDQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 626
Score = 250 (93.1 bits), Expect = 1.9e-48, Sum P(2) = 1.9e-48
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
MK CL G PC++L ++ DC LD+++ F PLP ++ N
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGW 55
Query: 57 SDSQNRQKVEKPL-DANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
S ++K L + + +F + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 56 SLKDGNAFLDKELKECSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSAL 173
GF+ +Y TE +IG+L+MEEL+ N R + S W + LLPS L
Sbjct: 115 EHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPL 169
Query: 174 RKIALGEDGSELGGG--CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGAC 231
+ D E+ C + V +SK+Q + + ++ G + + SSG +G+
Sbjct: 170 K------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSS 223
Query: 232 NWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
NWII ++Y+SGS+ + H D +++
Sbjct: 224 NWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 256
>UNIPROTKB|F6XI08 [details] [associations]
symbol:INTS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032039 "integrator complex" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] InterPro:IPR027074
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 CTD:55756 KO:K13146
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445 OMA:PLAMKCV
Ensembl:ENSCAFT00000013124 EMBL:AAEX03014336 RefSeq:XP_543216.2
GeneID:486090 KEGG:cfa:486090 Uniprot:F6XI08
Length = 658
Score = 330 (121.2 bits), Expect = 2.5e-48, Sum P(2) = 2.5e-48
Identities = 98/356 (27%), Positives = 171/356 (48%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS VA L ++
Sbjct: 282 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQ 341
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 342 IFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSLHGD-FSSDFRQPCVVFTGHPSL 400
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 401 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 460
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 461 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 520
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEP----GGSSQTRPFLHWGSPD 605
++A +K +++ + L KH L P P GG + R S D
Sbjct: 521 ELADALVPMEIKPG-ISLATVSAVLHTKDNKHVLQPPPRPTQPTGGKKRKR-----ASDD 574
Query: 606 -PENLLAELSKMGINGS--VERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
P+ ++ K ++GS VE+ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 575 IPD---CKVLKPLLSGSIPVEQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 626
Score = 250 (93.1 bits), Expect = 2.5e-48, Sum P(2) = 2.5e-48
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
MK CL G PC++L ++ DC LD+++ F PLP ++ N
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGW 55
Query: 57 SDSQNRQKVEKPL-DANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
S ++K L + + +F + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 56 SLKDGNAFLDKELKECSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSAL 173
GF+ +Y TE +IG+L+MEEL+ N R + S W + LLPS L
Sbjct: 115 EHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPL 169
Query: 174 RKIALGEDGSELGGG--CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGAC 231
+ D E+ C + V +SK+Q + + ++ G + + SSG +G+
Sbjct: 170 K------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSS 223
Query: 232 NWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
NWII ++Y+SGS+ + H D +++
Sbjct: 224 NWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 256
>UNIPROTKB|F1MMA6 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9913
"Bos taurus" [GO:0032039 "integrator complex" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] InterPro:IPR027074
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 GO:GO:0032039
GO:GO:0016180 IPI:IPI00701634 UniGene:Bt.91042
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445 OMA:PLAMKCV
EMBL:DAAA02021965 EMBL:DAAA02021964 Ensembl:ENSBTAT00000049079
ArrayExpress:F1MMA6 Uniprot:F1MMA6
Length = 658
Score = 329 (120.9 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 97/356 (27%), Positives = 171/356 (48%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS VA L ++
Sbjct: 282 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQ 341
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 342 IFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSIHGD-FSNDFRQPCVVFTGHPSL 400
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 401 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 460
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 461 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMVDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 520
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEP----GGSSQTRPFLHWGSPD 605
++A +K +++ + L KH L P P GG + R S D
Sbjct: 521 ELADSLVPMEIKPG-ISLATVSAVLHTKDNKHVLQPPPRPTQPTGGKKRKR-----ASDD 574
Query: 606 -PENLLAELSKMGINGS--VERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
P+ ++ K ++GS V++ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 575 IPD---CKVLKPLLSGSIPVDQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 626
Score = 250 (93.1 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
MK CL G PC++L ++ DC LD+++ F PLP ++ N
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGW 55
Query: 57 SDSQNRQKVEKPL-DANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
S ++K L + + +F + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 56 SLKDGNAFLDKELKECSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSAL 173
GF+ +Y TE +IG+L+MEEL+ N R + S W + LLPS L
Sbjct: 115 EHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPL 169
Query: 174 RKIALGEDGSELGGG--CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGAC 231
+ D E+ C + V +SK+Q + + ++ G + + SSG +G+
Sbjct: 170 K------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSS 223
Query: 232 NWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
NWII ++Y+SGS+ + H D +++
Sbjct: 224 NWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 256
>MGI|MGI:1098533 [details] [associations]
symbol:Ints9 "integrator complex subunit 9" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016180 "snRNA processing"
evidence=ISO] [GO:0032039 "integrator complex" evidence=ISO]
InterPro:IPR027074 MGI:MGI:1098533 eggNOG:COG1236
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 GO:GO:0032039
GO:GO:0016180 CTD:55756 HOGENOM:HOG000045359 HOVERGEN:HBG081802
KO:K13146 OrthoDB:EOG415GCW PANTHER:PTHR11203:SF2
GeneTree:ENSGT00390000001445 EMBL:AK038979 EMBL:AK077634
EMBL:AK136992 EMBL:AK150195 EMBL:BC028953 EMBL:BC055700
IPI:IPI00223422 IPI:IPI00406798 RefSeq:NP_001240660.1
RefSeq:NP_700463.2 UniGene:Mm.71332 ProteinModelPortal:Q8K114
SMR:Q8K114 STRING:Q8K114 PhosphoSite:Q8K114 PaxDb:Q8K114
PRIDE:Q8K114 Ensembl:ENSMUST00000043914 GeneID:210925
KEGG:mmu:210925 UCSC:uc007uiv.1 UCSC:uc007uiw.1 InParanoid:Q8K114
NextBio:373083 Bgee:Q8K114 CleanEx:MM_INTS9 Genevestigator:Q8K114
Uniprot:Q8K114
Length = 658
Score = 328 (120.5 bits), Expect = 5.5e-48, Sum P(2) = 5.5e-48
Identities = 95/353 (26%), Positives = 171/353 (48%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS VA L ++
Sbjct: 282 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQ 341
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ + ++H ++++PC++F+ H SL
Sbjct: 342 IFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYRSIHGD-FSNDFRQPCVLFTGHPSL 400
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 401 RFGDVVHFMELWGKSSLNTIIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 460
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 461 LKEVQPLHVVCPEQYTQPPPAQAHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 520
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGG--SSQTRPFLHWGSPDPE 607
++A +K +++ + L KH L P +P SS+ R ++ PD
Sbjct: 521 ELADSLVPMEIKPG-ISLATVSAVLHTKDNKHVLQPPPKPTQPTSSKKRKRVNEDIPD-- 577
Query: 608 NLLAELSKMGINGS--VERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
++ K ++GS VE+ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 578 ---CKVLKPLLSGSIPVEQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 626
Score = 249 (92.7 bits), Expect = 5.5e-48, Sum P(2) = 5.5e-48
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
MK CL G PC++L ++ DC LD+++ F PLP ++ N
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGW 55
Query: 57 SDSQNRQKVEKPL-DANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
S ++K L + + +F + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 56 SLKDGNAFLDKELKECSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSAL 173
GF+ +Y TE +IG+L+MEEL+ N R + S W + LLPS L
Sbjct: 115 EHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPL 169
Query: 174 RKIALGEDGSELGGG--CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGAC 231
+ D E+ C + V +SK+Q + + ++ G + + SSG +G+
Sbjct: 170 K------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSS 223
Query: 232 NWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
NWII ++Y+SGS+ + H D +++
Sbjct: 224 NWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 256
>UNIPROTKB|Q5ZKK2 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9031
"Gallus gallus" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
eggNOG:COG1236 InterPro:IPR022712 Pfam:PF10996 SMART:SM01027
GO:GO:0032039 GO:GO:0016180 CTD:55756 HOGENOM:HOG000045359
HOVERGEN:HBG081802 KO:K13146 OrthoDB:EOG415GCW
PANTHER:PTHR11203:SF2 EMBL:AJ720082 IPI:IPI00651516
RefSeq:NP_001026271.1 UniGene:Gga.21113 ProteinModelPortal:Q5ZKK2
STRING:Q5ZKK2 Ensembl:ENSGALT00000026848 GeneID:422023
KEGG:gga:422023 GeneTree:ENSGT00390000001445 InParanoid:Q5ZKK2
OMA:PLAMKCV NextBio:20824712 Uniprot:Q5ZKK2
Length = 658
Score = 323 (118.8 bits), Expect = 6.2e-48, Sum P(2) = 6.2e-48
Identities = 95/351 (27%), Positives = 170/351 (48%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L +P Y IS VA L ++
Sbjct: 282 CSNLAMTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQ 341
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC++F+ H SL
Sbjct: 342 IFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSIHGD-FSNDFKQPCVIFTGHPSL 400
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 401 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKL 460
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXXXX-------XYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 461 LKEVQPLHVVCPEQYTQPPPSQSHRTDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMP 520
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQL-LPENEPGG-SSQTRPFLHWGSPDPE 607
++A +K +++ + L KH L LP P +S+ R + P+ +
Sbjct: 521 ELADSLVPLEIKPG-ISLATVSAMLHTKDNKHVLQLPPKPPQPPTSKKRKRVSDDVPECK 579
Query: 608 NLLAELSKMGINGSVERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
L LS G + V++ + E GF+ VKV+D K ++ ++ A T+I
Sbjct: 580 PLKPLLS--G-SIPVDQFVQTLEKH-GFSDVKVEDTAKGHIVLLQEAETLI 626
Score = 254 (94.5 bits), Expect = 6.2e-48, Sum P(2) = 6.2e-48
Identities = 74/273 (27%), Positives = 129/273 (47%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLP-------NDFYKAIC 53
MK CL G PC++L ++ DC LD+++ F PLP + +
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSKLPGLVL 57
Query: 54 KENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
K+ S +++ K + + + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 58 KDGSTFLDKEL--KECSGHVFVDSVPEF-CLPETELLDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSAL 173
GF+ +Y TE +IG+L+MEEL+ N R + S W E LLP+ L
Sbjct: 115 EYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASTWKNKEVQRLLPAPL 169
Query: 174 RKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGAC 231
+ D E+ C + V +SK+Q + + ++ G + + SSG +G+
Sbjct: 170 K------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSS 223
Query: 232 NWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
NWII ++Y+SGS+ + H D +++
Sbjct: 224 NWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 256
>RGD|1311539 [details] [associations]
symbol:Ints9 "integrator complex subunit 9" species:10116
"Rattus norvegicus" [GO:0016180 "snRNA processing"
evidence=IEA;ISO] [GO:0032039 "integrator complex"
evidence=IEA;ISO] InterPro:IPR027074 RGD:1311539 InterPro:IPR022712
Pfam:PF10996 SMART:SM01027 GO:GO:0032039 GO:GO:0016180
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445 IPI:IPI00362364
Ensembl:ENSRNOT00000018071 Uniprot:F1M365
Length = 659
Score = 326 (119.8 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 96/351 (27%), Positives = 169/351 (48%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS VA L ++
Sbjct: 283 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQ 342
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ + ++H ++++PC++F+ H SL
Sbjct: 343 IFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYRSIHGD-FSHDFRQPCVLFTGHPSL 401
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 402 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 461
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 462 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 521
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGG--SSQTRPFLHWGSPDPE 607
++A +K +++ + L KH L P +P SS+ R + PD +
Sbjct: 522 ELADSLVPMEIKPG-ISLATVSAVLHTKDNKHVLQPPPKPTQPTSSKKRKRVSEDVPDSK 580
Query: 608 NLLAELSKMGINGSVERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
L LS G + VE+ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 581 VLKPLLS--G-SIPVEQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 627
Score = 246 (91.7 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 72/258 (27%), Positives = 125/258 (48%)
Query: 16 PCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN----SDSQNRQKVEKPL-D 70
PC++L ++ DC LD+++ F PLP ++ N S ++K L +
Sbjct: 14 PCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGWSLKDGNAFLDKELKE 71
Query: 71 ANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLTRMEGFSAKIYITEAA 128
+ +F + P + + L ++S +DV+LIS+ M+ LP++T GF+ +Y TE
Sbjct: 72 CSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYITEHTGFTGTVYATEPT 130
Query: 129 ARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGG 188
+IG+L+MEEL+ N R + S W E LLPS L+ D E+
Sbjct: 131 MQIGRLLMEELV--NFIERV---PKAQSASLWKNKEIQRLLPSPLK------DAVEVSTW 179
Query: 189 --CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYIS 246
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+S
Sbjct: 180 RRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVS 239
Query: 247 GSNFASGHAMDFDYRAIQ 264
GS+ + H D +++
Sbjct: 240 GSSLLTTHPQPMDQASLK 257
>UNIPROTKB|G3XAN1 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
EMBL:CH471080 InterPro:IPR022712 Pfam:PF10996 SMART:SM01027
PANTHER:PTHR11203:SF2 EMBL:AC040975 EMBL:AC131969 UniGene:Hs.162397
HGNC:HGNC:25592 ChiTaRS:INTS9 ProteinModelPortal:G3XAN1
Ensembl:ENST00000523303 ArrayExpress:G3XAN1 Bgee:G3XAN1
Uniprot:G3XAN1
Length = 525
Score = 309 (113.8 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 63/195 (32%), Positives = 110/195 (56%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS VA L ++
Sbjct: 282 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQ 341
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 342 IFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHGD-FSNDFRQPCVVFTGHPSL 400
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 401 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 460
Query: 497 LKILQPKLVLFPEEW 511
LK +QP V+ PE++
Sbjct: 461 LKEVQPLHVVCPEQY 475
Score = 250 (93.1 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
MK CL G PC++L ++ DC LD+++ F PLP ++ N
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGW 55
Query: 57 SDSQNRQKVEKPL-DANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
S ++K L + + +F + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 56 SLKDGNAFLDKELKECSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSAL 173
GF+ +Y TE +IG+L+MEEL+ N R + S W + LLPS L
Sbjct: 115 EHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPL 169
Query: 174 RKIALGEDGSELGGG--CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGAC 231
+ D E+ C + V +SK+Q + + ++ G + + SSG +G+
Sbjct: 170 K------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSS 223
Query: 232 NWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
NWII ++Y+SGS+ + H D +++
Sbjct: 224 NWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 256
>UNIPROTKB|F1RJQ5 [details] [associations]
symbol:INTS9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032039 "integrator complex" evidence=IEA] [GO:0016180
"snRNA processing" evidence=IEA] InterPro:IPR027074
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 PANTHER:PTHR11203:SF2
GeneTree:ENSGT00390000001445 OMA:PLAMKCV EMBL:CU407017
Ensembl:ENSSSCT00000010615 Uniprot:F1RJQ5
Length = 576
Score = 330 (121.2 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 97/355 (27%), Positives = 169/355 (47%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS VA L ++
Sbjct: 200 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQ 259
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 260 IFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSIHGD-FSNDFRQPCVVFTGHPSL 318
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 319 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 378
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 379 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 438
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEP----GGSSQTRPFLHWGSPD 605
++A +K +++ + L KH L P P GG + R PD
Sbjct: 439 ELADSLVPMEIKPG-ISLATVSAVLHTKDNKHVLQPPPRPAQPVGGKKRKRASEE--VPD 495
Query: 606 PENLLAELSKMGINGS--VERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
++ K ++GS VE+ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 496 -----CKVVKPLLSGSIPVEQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 544
Score = 211 (79.3 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 89 LWNVSFIDVVLISSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQ 148
L ++S +DV+LIS+ M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R
Sbjct: 8 LIDLSTVDVILISNYHCMMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV 65
Query: 149 FYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGG--CPCIAHVKDCISKVQTLR 206
+ S W + LLPS L+ D E+ C + V +SK+Q +
Sbjct: 66 ---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQMVG 116
Query: 207 FGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
+ ++ G + + SSG +G+ NWII ++Y+SGS+ + H D +++
Sbjct: 117 YSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 174
>FB|FBgn0036570 [details] [associations]
symbol:IntS9 "Integrator 9" species:7227 "Drosophila
melanogaster" [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS] [GO:0034472 "snRNA 3'-end processing" evidence=IDA]
[GO:0032039 "integrator complex" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] InterPro:IPR027074 EMBL:AE014296
GO:GO:0006378 GO:GO:0005847 GO:GO:0006379 InterPro:IPR022712
Pfam:PF10996 SMART:SM01027 CTD:55756 KO:K13146
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445 OMA:PLAMKCV
GO:GO:0034472 EMBL:AY058574 RefSeq:NP_648838.3 UniGene:Dm.977
SMR:Q95TS5 IntAct:Q95TS5 MINT:MINT-1734573
EnsemblMetazoa:FBtr0075495 GeneID:39763 KEGG:dme:Dmel_CG5222
UCSC:CG5222-RA FlyBase:FBgn0036570 InParanoid:Q95TS5
OrthoDB:EOG4FJ6QV GenomeRNAi:39763 NextBio:815254 Uniprot:Q95TS5
Length = 654
Score = 292 (107.8 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 61/200 (30%), Positives = 105/200 (52%)
Query: 314 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEEL 372
KL +C +++ GS LIP GV L E + +E + L +P++ IS VA+
Sbjct: 276 KLGELCMNVALTIRNNGSALIPCYPSGVVYDLFECLTQNLENAGLNNVPMFFISPVADSS 335
Query: 373 LAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFS 432
LAY+N + EWL +Q K++ D F H ++ K+ + V S ++++PC+VF
Sbjct: 336 LAYSNILAEWLSSAKQNKVYLPDDPFPHAFYLRNNKLKHYNHVFSEGFSKDFRQPCVVFC 395
Query: 433 PHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQ 491
H SLR G +H + W + +NS++ E + + PF+P++MK C + Q
Sbjct: 396 GHPSLRFGDAVHFIEMWGNNPNNSIIFTEPDFPYLQVLAPFQPLAMKAFYCPIDTSLNYQ 455
Query: 492 KVQPLLKILQPKLVLFPEEW 511
+ L+K L+P +++ PE +
Sbjct: 456 QANKLIKELKPNVLVIPEAY 475
Score = 242 (90.2 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 76/272 (27%), Positives = 127/272 (46%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
M+ CL G PC+I+ G ++ DC L + F PLP F +++ N
Sbjct: 1 MRLYCL---SGDLAKPCYIITFKGLRIMLDCGLTEQTVLNFLPLP--FVQSLKWSNLPNF 55
Query: 57 --SDSQNRQKVEKPLDANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFL 112
S + Q + D +F + P + + L + S +DV+LIS+ + ML LP++
Sbjct: 56 VPSRDHDPQMDGELKDCCGRVFVDSTPEFNLPMDKML-DFSEVDVILISNYLNMLALPYI 114
Query: 113 TRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSA 172
T GF K+Y TE +IG+ +EEL+ +Y + + + W E+L LLPS
Sbjct: 115 TENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK--EKLHLLPSP 167
Query: 173 LRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACN 232
L + + + + V+ +SKV + + E+ G I SSG +G+ N
Sbjct: 168 LSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVSSGYCLGSSN 223
Query: 233 WIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
W++S A I Y+SGS+ + H + A++
Sbjct: 224 WVLSTAHEKICYVSGSSTLTTHPRPINQSALK 255
>UNIPROTKB|H7BYQ6 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 PANTHER:PTHR11203:SF2
EMBL:AC040975 EMBL:AC131969 HGNC:HGNC:25592 ChiTaRS:INTS9
ProteinModelPortal:H7BYQ6 Ensembl:ENST00000397363 Bgee:H7BYQ6
Uniprot:H7BYQ6
Length = 552
Score = 334 (122.6 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 92/351 (26%), Positives = 168/351 (47%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS VA L ++
Sbjct: 176 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQ 235
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 236 IFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHGD-FSNDFRQPCVVFTGHPSL 294
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 295 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 354
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 355 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 414
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENL 609
++A +K +++ + L KH L P P + + P+
Sbjct: 415 ELADSLVPMEIKPG-ISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-- 471
Query: 610 LAELSKMGINGS--VERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
++ K ++GS VE+ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 472 -CKVLKPLLSGSIPVEQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 520
Score = 185 (70.2 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 47/161 (29%), Positives = 79/161 (49%)
Query: 106 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 165
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 166 LELLPSALRKIALGEDGSELGGG--CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 223
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 224 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQ 264
SG +G+ NWII ++Y+SGS+ + H D +++
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLK 150
>DICTYBASE|DDB_G0282473 [details] [associations]
symbol:ints9 "integrator complex subunit 9"
species:44689 "Dictyostelium discoideum" [GO:0032039 "integrator
complex" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR027074 dictyBase:DDB_G0282473
GO:GO:0005634 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG1236 InterPro:IPR022712 Pfam:PF10996 SMART:SM01027
KO:K13146 PANTHER:PTHR11203:SF2 RefSeq:XP_640069.1
ProteinModelPortal:Q54SH0 EnsemblProtists:DDB0234099 GeneID:8623598
KEGG:ddi:DDB_G0282473 OMA:DDFSTID ProtClustDB:CLSZ2729002
Uniprot:Q54SH0
Length = 712
Score = 270 (100.1 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 65/221 (29%), Positives = 121/221 (54%)
Query: 298 LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS 357
+++ +++Y + + + L+ +CS +++ GG+VLIP G+ L L E +A ++
Sbjct: 299 ILSKINHYPNNPPD-QMLSELCSNIGSTLQQGGTVLIPSYSCGIILDLFEHLADYLNKVG 357
Query: 358 LK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVH 416
L +PIY +SSV++ +L+Y + EWL K +QE+ F + F H L+++ + + VH
Sbjct: 358 LPYVPIYFVSSVSKAVLSYADIYSEWLNKSKQERAFMPETPFLHQDLMRKGQFQAYQHVH 417
Query: 417 SPKLLMNWQ--EPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKP 474
S N+Q +PCI+F+ H S R+G L++ + NS+L++E + D + VLPF
Sbjct: 418 S-----NFQANDPCIIFTGHPSCRIGDITTLIKLYDNPKNSILLIEPDFDFKSTVLPF-- 470
Query: 475 ISMKVLQCSFLSGK---KLQKVQPLLKILQPKLVLFPEEWR 512
S ++ + FL + L+ L PK ++ P ++
Sbjct: 471 -SKQISRIQFLPIDPRINFNEANLLISKLSPKHLIIPRIYK 510
Score = 177 (67.4 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 48/167 (28%), Positives = 83/167 (49%)
Query: 93 SFIDVVLISSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGA 152
S ID++LIS+ + LPF+T F KIY TE +IG+L++EEL+ M+ +Y
Sbjct: 115 STIDMILISNYTNIYALPFITEYTNFQGKIYATEPTVQIGKLLLEELVQMDKQYSNSSIN 174
Query: 153 EESSGPQWMK-WEELELLPSA-LRKIALGEDG----SELGGGCPCIAHVKDCISKVQTLR 206
++ W+ +E+L + + + + S ++ K+Q++R
Sbjct: 175 NNNNNNNLSDCWQNIEILEKLNVHNVGMENENLYRDSYRWKDLYKKIDIEKSFEKIQSIR 234
Query: 207 FGEEACYNGILIIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFA 251
F E + G I + SSG +G+ NW+I +KG + YIS S+ +
Sbjct: 235 FNESIKHYGFECIPS-SSGYGLGSANWVIE-SKGFERVVYISDSSLS 279
Score = 72 (30.4 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQ 60
MK CL Q PC +L +L DC L++S++ F P N Y N+++
Sbjct: 1 MKVHCLSQSAQ---SPCFLLEYKNVKILLDCALEISSILHFLP-KNLNYNNNNNNNNNNN 56
Query: 61 N 61
N
Sbjct: 57 N 57
Score = 46 (21.3 bits), Expect = 4.0e-23, Sum P(3) = 4.0e-23
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 286 SSFSDDNNNWEELMNSLSNYDESVEEMEKL 315
SS +++NNN N+LS+ +++E +EKL
Sbjct: 171 SSINNNNNN-----NNLSDCWQNIEILEKL 195
>UNIPROTKB|E2QVB2 [details] [associations]
symbol:INTS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032039 "integrator complex" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] InterPro:IPR027074
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 GO:GO:0032039
GO:GO:0016180 PANTHER:PTHR11203:SF2 Ensembl:ENSCAFT00000013124
Uniprot:E2QVB2
Length = 409
Score = 330 (121.2 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 98/356 (27%), Positives = 171/356 (48%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS VA L ++
Sbjct: 33 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQ 92
Query: 378 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 437
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 93 IFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSLHGD-FSSDFRQPCVVFTGHPSL 151
Query: 438 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 496
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 152 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 211
Query: 497 LKILQPKLVLFPEEWRXXXXXXXXXXXX-------XXXYSENETIHIPSLKESAELEIAA 549
LK +QP V+ PE++ Y E + +P + ++EI
Sbjct: 212 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMP 271
Query: 550 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEP----GGSSQTRPFLHWGSPD 605
++A +K +++ + L KH L P P GG + R S D
Sbjct: 272 ELADALVPMEIKPG-ISLATVSAVLHTKDNKHVLQPPPRPTQPTGGKKRKR-----ASDD 325
Query: 606 -PENLLAELSKMGINGS--VERCMTDAESEDGFT-VKVQDPEKS-MIEVRAAVTVI 656
P+ ++ K ++GS VE+ + E GF+ +KV+D K ++ ++ A T+I
Sbjct: 326 IPD---CKVLKPLLSGSIPVEQFVQTLEKH-GFSDIKVEDTAKGHIVLLQEAETLI 377
>WB|WBGene00017608 [details] [associations]
symbol:F19F10.12 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR027074 GO:GO:0009792 eggNOG:COG1236
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 KO:K13146
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445 EMBL:FO080914
RefSeq:NP_504953.1 ProteinModelPortal:Q95ZM2 PaxDb:Q95ZM2
EnsemblMetazoa:F19F10.12 GeneID:179142 KEGG:cel:CELE_F19F10.12
UCSC:F19F10.12 CTD:179142 WormBase:F19F10.12 HOGENOM:HOG000199610
InParanoid:Q95ZM2 OMA:EFMERIE NextBio:904092 Uniprot:Q95ZM2
Length = 646
Score = 226 (84.6 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 57/214 (26%), Positives = 109/214 (50%)
Query: 298 LMNSLSNY-DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECS 356
L+ SLS D + +EM + D +K GSVL+PI VG +++E ++ + +
Sbjct: 253 LVTSLSRLVDTTAKEMGYS--LIKTITDVLKKHGSVLLPICPVGPIFEMIEAVSDIITTT 310
Query: 357 S---LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFP 413
+ L PIY IS VA+ +A + EW+ + RQ ++ + ++H LIK ++ ++
Sbjct: 311 NGIPLDTPIYFISPVAKSAIAMASISAEWMSESRQNAVYLPEEPYSHSNLIKSGRVKIYD 370
Query: 414 AVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPF 472
+++ ++ PC++F+ H SLR+G H++ D N+++V + ++ E PF
Sbjct: 371 SLYG-SFSKEFKTPCVIFASHASLRIGDAAHMVEVLGSDPKNAVIVTDPDLPCEDVREPF 429
Query: 473 KPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 506
+ + +K + ++ LL +PK VL
Sbjct: 430 RNLPIKFINIPMDFRMDFASLERLLADAKPKYVL 463
Score = 166 (63.5 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 61/235 (25%), Positives = 103/235 (43%)
Query: 16 PCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLI 75
PC +L +L D P+D + FS LP+ Y++ +N+ + ++ + + +
Sbjct: 13 PCFLLEWPNARILMDTPIDFTPF--FSFLPH-VYQSPRIKNAPIAKKFQIPYLKELGNRV 69
Query: 76 FAEPWYKTVN-NLHLWNVSFIDVVLISSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQL 134
+ E + + + + + ID +L+S+ +GLPF T GFS KIY+TE A + G+L
Sbjct: 70 YVESPPEIFHVSTDMLKMDTIDAILVSNYESFVGLPFYTEGSGFSGKIYVTEIAYQYGKL 129
Query: 135 MMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAH 194
+MEE++ +F E P KW+ E ++ E
Sbjct: 130 LMEEML-------EFISRIEVL-PSDKKWKREEFCGKFPNPPF--QNPVEWRPYYTT-TD 178
Query: 195 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+ C++KV TL F + I + S G G+ W I AY+S SN
Sbjct: 179 MHSCLAKVITLSFNQTIDLFRIKVTPVVS-GHTYGSAYWTIKTENEQFAYLSASN 232
>UNIPROTKB|E5RG70 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
PANTHER:PTHR11203:SF2 EMBL:AC040975 EMBL:AC131969 HGNC:HGNC:25592
ChiTaRS:INTS9 IPI:IPI00974179 ProteinModelPortal:E5RG70 SMR:E5RG70
Ensembl:ENST00000523436 ArrayExpress:E5RG70 Bgee:E5RG70
Uniprot:E5RG70
Length = 300
Score = 176 (67.0 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 61/219 (27%), Positives = 103/219 (47%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
MK CL G PC++L ++ DC LD+++ F PLP ++ N
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGW 55
Query: 57 SDSQNRQKVEKPL-DANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
S ++K L + + +F + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 56 SLKDGNAFLDKELKECSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSAL 173
GF+ +Y TE +IG+L+MEEL+ N R + S W + LLPS L
Sbjct: 115 EHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPL 169
Query: 174 RKIALGEDGSELGGG--CPCIAHVKDCISKVQTLRFGEE 210
+ D E+ C + V +SK+Q + + ++
Sbjct: 170 K------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQK 202
Score = 92 (37.4 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 377
CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS VA L ++
Sbjct: 237 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQ 296
Query: 378 TIPE 381
E
Sbjct: 297 IFAE 300
>UNIPROTKB|H0YBH8 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
PANTHER:PTHR11203:SF2 EMBL:AC040975 EMBL:AC131969 HGNC:HGNC:25592
ChiTaRS:INTS9 Ensembl:ENST00000524081 Uniprot:H0YBH8
Length = 223
Score = 133 (51.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 16 PCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN----SDSQNRQKVEKPL-D 70
PC++L ++ DC LD+++ F PLP ++ N S ++K L +
Sbjct: 5 PCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGWSLKDGNAFLDKELKE 62
Query: 71 ANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLTRMEGFSAKIYITEAA 128
+ +F + P + + L ++S +DV+LIS+ M+ LP++T GF+ +Y TE
Sbjct: 63 CSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYITEHTGFTGTVYATEPT 121
Query: 129 ARIGQLMMEEL 139
+IG+L+ L
Sbjct: 122 VQIGRLLPSPL 132
Score = 106 (42.4 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 189 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 248
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 144 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 203
Query: 249 NFASGHAMDFDYRAIQ 264
+ + H D +++
Sbjct: 204 SLLTTHPQPMDQASLK 219
>UNIPROTKB|E5RK47 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
PANTHER:PTHR11203:SF2 EMBL:AC040975 EMBL:AC131969 HGNC:HGNC:25592
ChiTaRS:INTS9 IPI:IPI00976000 ProteinModelPortal:E5RK47 SMR:E5RK47
Ensembl:ENST00000518510 ArrayExpress:E5RK47 Bgee:E5RK47
Uniprot:E5RK47
Length = 170
Score = 160 (61.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/147 (30%), Positives = 76/147 (51%)
Query: 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKEN---- 56
MK CL G PC++L ++ DC LD+++ F PLP ++ N
Sbjct: 1 MKLYCL---SGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLP--LVQSPRLSNLPGW 55
Query: 57 SDSQNRQKVEKPL-DANDLIFAE--PWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLT 113
S ++K L + + +F + P + + L ++S +DV+LIS+ M+ LP++T
Sbjct: 56 SLKDGNAFLDKELKECSGHVFVDSVPEF-CLPETELIDLSTVDVILISNYHCMMALPYIT 114
Query: 114 RMEGFSAKIYITEAAARIGQLMMEELI 140
GF+ +Y TE +IG+L+MEEL+
Sbjct: 115 EHTGFTGTVYATEPTVQIGRLLMEELV 141
>UNIPROTKB|E1B7Q9 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9913
"Bos taurus" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 OMA:MAVEYMS GeneTree:ENSGT00700000104485
EMBL:DAAA02043243 IPI:IPI00971575 Ensembl:ENSBTAT00000010020
Uniprot:E1B7Q9
Length = 598
Score = 115 (45.5 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E LK PIY + + E+ Y W
Sbjct: 226 ETVERGGKVLIPVFALGRAQELCILLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPWT 285
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 286 -NQKIRKTFVQRNMFEF------KHIKAFDRAFADS-----PGPMVVFATPGMLHAGQSL 333
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 334 QIFRKWAGNEKNMVIM 349
Score = 65 (27.9 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T+ I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLED 106
Score = 60 (26.2 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 195 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+KDC+ KV + + + L IKA+ +G +GA + I ++ Y N
Sbjct: 125 IKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 179
Score = 40 (19.1 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C +++++G +V+ DC + +
Sbjct: 19 CILVSIAGKNVMLDCGMHM 37
>UNIPROTKB|F1NV30 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 OMA:MAVEYMS GeneTree:ENSGT00700000104485
IPI:IPI00571913 EMBL:AADN02040858 Ensembl:ENSGALT00000002586
Uniprot:F1NV30
Length = 600
Score = 116 (45.9 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 34/136 (25%), Positives = 61/136 (44%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E +LK PIY + + E+ Y W
Sbjct: 227 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 287 -NQKIRKTFVQRNMFEF------KHIKAFDRAFADN-----PGPMVVFATPGMLHAGQSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 335 QIFRKWAGNEKNMVIM 350
Score = 63 (27.2 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLED 106
Score = 56 (24.8 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 195 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+KDC+ KV + + + L IKA+ +G +GA + I ++ Y N
Sbjct: 126 IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVVYTGDYN 180
Score = 40 (19.1 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C +++++G +V+ DC + +
Sbjct: 19 CILVSIAGKNVMLDCGMHM 37
>UNIPROTKB|Q5ZIH0 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 GO:GO:0016787 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
HOGENOM:HOG000231294 KO:K13148 GO:GO:0032039 GO:GO:0016180
HOVERGEN:HBG080215 OrthoDB:EOG4GXFMB EMBL:AJ720814 IPI:IPI00571913
RefSeq:NP_001012854.1 UniGene:Gga.13403 ProteinModelPortal:Q5ZIH0
STRING:Q5ZIH0 GeneID:419418 KEGG:gga:419418 CTD:54973
InParanoid:Q5ZIH0 NextBio:20822477 Uniprot:Q5ZIH0
Length = 600
Score = 116 (45.9 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 34/136 (25%), Positives = 61/136 (44%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E +LK PIY + + E+ Y W
Sbjct: 227 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 287 -NQKIRKTFVQRNMFEF------KHIKAFDRAFADN-----PGPMVVFATPGMLHAGQSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 335 QIFRKWAGNEKNMVIM 350
Score = 63 (27.2 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLED 106
Score = 56 (24.8 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 195 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+KDC+ KV + + + L IKA+ +G +GA + I ++ Y N
Sbjct: 126 IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVVYTGDYN 180
Score = 40 (19.1 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C +++++G +V+ DC + +
Sbjct: 19 CILVSIAGKNVMLDCGMHM 37
>ZFIN|ZDB-GENE-050522-13 [details] [associations]
symbol:cpsf3l "cleavage and polyadenylation specific
factor 3-like" species:7955 "Danio rerio" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
ZFIN:ZDB-GENE-050522-13 GO:GO:0016787 GO:GO:0043484
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
OMA:MAVEYMS GeneTree:ENSGT00700000104485 EMBL:CABZ01054885
EMBL:CR846089 IPI:IPI00865509 Ensembl:ENSDART00000102902
Uniprot:E7EXW1
Length = 601
Score = 114 (45.2 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E +LK PIY + + E+ Y W
Sbjct: 230 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWT 289
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F ++ P +VF+ L G ++
Sbjct: 290 -NQKIRKTFVQRNMFEF------KHIKAFDRSYADN-----PGPMVVFATPGMLHAGQSL 337
Query: 444 HLLRRWSGDHNSLLVL 459
+ ++W+G+ +++++
Sbjct: 338 QIFKKWAGNEKNMVIM 353
Score = 65 (27.9 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+++ M G+ IY+T I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLED 106
Score = 54 (24.1 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 195 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGA 230
+KDC+ KV L + + L IKA+ +G +GA
Sbjct: 126 IKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHVLGA 161
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 4/19 (21%), Positives = 13/19 (68%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C ++++ G +++ DC + +
Sbjct: 19 CILVSIGGKNIMLDCGMHM 37
>MGI|MGI:1919207 [details] [associations]
symbol:Cpsf3l "cleavage and polyadenylation specific factor
3-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 MGI:MGI:1919207 GO:GO:0005737 GO:GO:0016787
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 HOGENOM:HOG000231294 KO:K13148 OMA:MAVEYMS
GeneTree:ENSGT00700000104485 GO:GO:0032039 GO:GO:0016180
HOVERGEN:HBG080215 OrthoDB:EOG4GXFMB CTD:54973 EMBL:AK010425
EMBL:AK090206 EMBL:AK150436 EMBL:AK152740 EMBL:AK167607
EMBL:AK172533 EMBL:BC008240 EMBL:BC011155 IPI:IPI00467084
RefSeq:NP_082296.1 UniGene:Mm.259270 UniGene:Mm.475640
ProteinModelPortal:Q9CWS4 SMR:Q9CWS4 STRING:Q9CWS4
PhosphoSite:Q9CWS4 PaxDb:Q9CWS4 PRIDE:Q9CWS4
Ensembl:ENSMUST00000030901 GeneID:71957 KEGG:mmu:71957
InParanoid:Q9CWS4 NextBio:335052 Bgee:Q9CWS4 Genevestigator:Q9CWS4
GermOnline:ENSMUSG00000029034 Uniprot:Q9CWS4
Length = 600
Score = 120 (47.3 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 34/136 (25%), Positives = 62/136 (45%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 227 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFITWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 287 -NQKIRKTFVQRNMFEF------KHIKAFDRTFADN-----PGPMVVFATPGMLHAGQSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 335 QIFRKWAGNEKNMVIM 350
Score = 64 (27.6 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 157 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213
GP +M + P L RKIA+ + G +KDC+ KV + +
Sbjct: 88 GPIYMTHPTQAICPILLEDYRKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQV 144
Query: 214 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+ L IKA+ +G +GA + I ++ Y N
Sbjct: 145 DDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 180
Score = 63 (27.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLED 106
Score = 43 (20.2 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C ++++SG +V+ DC + +
Sbjct: 19 CILVSISGKNVMLDCGMHM 37
>RGD|1306841 [details] [associations]
symbol:Cpsf3l "cleavage and polyadenylation specific factor
3-like" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 RGD:1306841 GO:GO:0005634 GO:GO:0005737
GO:GO:0016787 eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 HOGENOM:HOG000231294 KO:K13148
OMA:MAVEYMS GeneTree:ENSGT00700000104485 HOVERGEN:HBG080215
OrthoDB:EOG4GXFMB CTD:54973 EMBL:BC105303 IPI:IPI00365477
RefSeq:NP_001029064.1 UniGene:Rn.98615 ProteinModelPortal:Q3MHC2
STRING:Q3MHC2 Ensembl:ENSRNOT00000026725 GeneID:298688
KEGG:rno:298688 InParanoid:Q3MHC2 NextBio:644186
Genevestigator:Q3MHC2 GermOnline:ENSRNOG00000019712 Uniprot:Q3MHC2
Length = 600
Score = 120 (47.3 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 34/136 (25%), Positives = 62/136 (45%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 227 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFITWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 287 -NQKIRKTFVQRNMFEF------KHIKAFDRTFADN-----PGPMVVFATPGMLHAGQSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 335 QIFRKWAGNEKNMVIM 350
Score = 64 (27.6 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 157 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213
GP +M + P L RKIA+ + G +KDC+ KV + +
Sbjct: 88 GPIYMTHPTQAICPILLEDYRKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQV 144
Query: 214 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+ L IKA+ +G +GA + I ++ Y N
Sbjct: 145 DDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 180
Score = 63 (27.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLED 106
Score = 43 (20.2 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C ++++SG +V+ DC + +
Sbjct: 19 CILVSISGKNVMLDCGMHM 37
>UNIPROTKB|Q5TA45 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0005634 GO:GO:0005737 GO:GO:0016787
EMBL:AL139287 eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 KO:K13148 HOVERGEN:HBG080215
OrthoDB:EOG4GXFMB CTD:54973 EMBL:AL136813 EMBL:AK000549
EMBL:AK021939 EMBL:AK023356 EMBL:AK297350 EMBL:CR533557
EMBL:BC000675 EMBL:BC007978 EMBL:BC013904 EMBL:BK005728
EMBL:BK005673 IPI:IPI00063404 IPI:IPI00306882 IPI:IPI00514973
RefSeq:NP_001243392.1 RefSeq:NP_060341.2 UniGene:Hs.6449
ProteinModelPortal:Q5TA45 SMR:Q5TA45 IntAct:Q5TA45
MINT:MINT-1482228 STRING:Q5TA45 PhosphoSite:Q5TA45 DMDM:118572557
PaxDb:Q5TA45 PRIDE:Q5TA45 DNASU:54973 Ensembl:ENST00000419704
Ensembl:ENST00000435064 Ensembl:ENST00000450926
Ensembl:ENST00000545578 GeneID:54973 KEGG:hsa:54973 UCSC:uc001aee.1
UCSC:uc001aeh.1 UCSC:uc009vjz.1 GeneCards:GC01M001236
HGNC:HGNC:26052 HPA:HPA028379 HPA:HPA029025 MIM:611354
neXtProt:NX_Q5TA45 PharmGKB:PA142672080 InParanoid:Q5TA45
PhylomeDB:Q5TA45 ChiTaRS:CPSF3L GenomeRNAi:54973 NextBio:58222
ArrayExpress:Q5TA45 Bgee:Q5TA45 Genevestigator:Q5TA45
GermOnline:ENSG00000127054 Uniprot:Q5TA45
Length = 600
Score = 120 (47.3 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 34/136 (25%), Positives = 62/136 (45%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 227 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 287 -NQKIRKTFVQRNMFEF------KHIKAFDRAFADN-----PGPMVVFATPGMLHAGQSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 335 QIFRKWAGNEKNMVIM 350
Score = 64 (27.6 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 157 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213
GP +M + P L RKIA+ + G +KDC+ KV + +
Sbjct: 88 GPIYMTHPTQAICPILLEDYRKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQV 144
Query: 214 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+ L IKA+ +G +GA + I ++ Y N
Sbjct: 145 DDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 180
Score = 63 (27.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLED 106
Score = 40 (19.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C +++++G +V+ DC + +
Sbjct: 19 CILVSIAGKNVMLDCGMHM 37
>UNIPROTKB|G3V1S5 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 EMBL:AL139287 EMBL:CH471183 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 KO:K13148 OMA:MAVEYMS
CTD:54973 UniGene:Hs.6449 GeneID:54973 KEGG:hsa:54973
HGNC:HGNC:26052 ChiTaRS:CPSF3L GenomeRNAi:54973
RefSeq:NP_001243385.1 ProteinModelPortal:G3V1S5 SMR:G3V1S5
Ensembl:ENST00000540437 ArrayExpress:G3V1S5 Bgee:G3V1S5
Uniprot:G3V1S5
Length = 606
Score = 120 (47.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 34/136 (25%), Positives = 62/136 (45%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 233 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWT 292
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 293 -NQKIRKTFVQRNMFEF------KHIKAFDRAFADN-----PGPMVVFATPGMLHAGQSL 340
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 341 QIFRKWAGNEKNMVIM 356
Score = 64 (27.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 157 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213
GP +M + P L RKIA+ + G +KDC+ KV + +
Sbjct: 94 GPIYMTHPTQAICPILLEDYRKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQV 150
Query: 214 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+ L IKA+ +G +GA + I ++ Y N
Sbjct: 151 DDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 186
Score = 63 (27.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T I +++E+
Sbjct: 66 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLED 112
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C +++++G +V+ DC + +
Sbjct: 25 CILVSIAGKNVMLDCGMHM 43
>UNIPROTKB|E2QY53 [details] [associations]
symbol:CPSF3L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 KO:K13148 OMA:MAVEYMS GeneTree:ENSGT00700000104485
EMBL:AAEX03003844 RefSeq:XP_003639102.1 Ensembl:ENSCAFT00000030626
GeneID:100855777 KEGG:cfa:100855777 Uniprot:E2QY53
Length = 600
Score = 116 (45.9 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 34/136 (25%), Positives = 61/136 (44%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E +LK PIY + + E+ Y W
Sbjct: 227 EAVERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 287 -NQKIRKTFVQRNMFEF------KHIKAFDRAFADN-----PGPMVVFATPGMLHAGQSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 335 QIFRKWAGNEKNMVIM 350
Score = 64 (27.6 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 157 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213
GP +M + P L RKIA+ + G +KDC+ KV + +
Sbjct: 88 GPIYMTHPTQAICPILLEDYRKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQV 144
Query: 214 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+ L IKA+ +G +GA + I ++ Y N
Sbjct: 145 DDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 180
Score = 63 (27.2 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLED 106
Score = 40 (19.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C +++++G +V+ DC + +
Sbjct: 19 CILVSIAGKNVMLDCGMHM 37
>UNIPROTKB|Q2YDM2 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0005634 GO:GO:0005737 GO:GO:0016787
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 HOGENOM:HOG000231294 EMBL:BC110155 IPI:IPI00725178
UniGene:Bt.4894 ProteinModelPortal:Q2YDM2 STRING:Q2YDM2
PRIDE:Q2YDM2 HOVERGEN:HBG080215 InParanoid:Q2YDM2 OrthoDB:EOG4GXFMB
Uniprot:Q2YDM2
Length = 599
Score = 115 (45.5 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E LK PIY + + E+ Y W
Sbjct: 227 ETVERGGKVLIPVFALGRAQELCILLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 287 -NQKIRKTFVQRNMFEF------KHIKAFDRAFADS-----PGPMVVFATPGMLHAGQSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 335 QIFRKWAGNEKNMVIM 350
Score = 65 (27.9 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T+ I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLED 106
Score = 64 (27.6 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 157 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213
GP +M + P L RKIA+ + G +KDC+ KV + +
Sbjct: 88 GPIYMTQPTQAICPILLEDYRKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQV 144
Query: 214 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+ L IKA+ +G +GA + I ++ Y N
Sbjct: 145 DDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 180
Score = 40 (19.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C +++++G +V+ DC + +
Sbjct: 19 CILVSIAGKNVMLDCGMHM 37
>FB|FBgn0039691 [details] [associations]
symbol:IntS11 "Integrator 11" species:7227 "Drosophila
melanogaster" [GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0005847
"mRNA cleavage and polyadenylation specificity factor complex"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0034472 "snRNA
3'-end processing" evidence=IDA] [GO:0016180 "snRNA processing"
evidence=ISS] [GO:0032039 "integrator complex" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001279
SMART:SM00849 Pfam:PF07521 EMBL:AE014297 GO:GO:0022008
GO:GO:0006378 GO:GO:0016787 GO:GO:0005847 GO:GO:0006379
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 KO:K13148 OMA:MAVEYMS GeneTree:ENSGT00700000104485
GO:GO:0034472 EMBL:AY061097 RefSeq:NP_651721.1 UniGene:Dm.3722
SMR:Q9VAH9 STRING:Q9VAH9 EnsemblMetazoa:FBtr0085476 GeneID:43506
KEGG:dme:Dmel_CG1972 UCSC:CG1972-RA CTD:43506 FlyBase:FBgn0039691
InParanoid:Q9VAH9 OrthoDB:EOG47D7X3 GenomeRNAi:43506 NextBio:834295
Uniprot:Q9VAH9
Length = 597
Score = 100 (40.3 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 32/136 (23%), Positives = 59/136 (43%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
+ V GG VLIP+ +G +L + + E +LK PIY + E+ Y W
Sbjct: 227 ECVAKGGKVLIPVFALGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFITWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F H + K I F K ++ +VF+ L G ++
Sbjct: 287 -NQKIRKTF------VHRNMFDFKHIKPFD-----KAYIDNPGAMVVFATPGMLHAGLSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ ++W+ + N+++++
Sbjct: 335 QIFKKWAPNENNMVIM 350
Score = 66 (28.3 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 93 SFIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEEL 139
S ID V+IS + G LP+++ + G++ IY+T I +++E++
Sbjct: 59 SHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM 107
Score = 64 (27.6 bits), Expect = 8.5e-05, Sum P(4) = 8.5e-05
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 156 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 212
+GP +M + P L RK+A+ G +KDC+ KV + +
Sbjct: 87 TGPIYMTHPTKAIAPILLEDMRKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMM 143
Query: 213 YNGILIIKAFSSGLDIGACN-WIISGAKGNIAYISGSN 249
+ L IKA+ +G +GA WI G++ ++ Y N
Sbjct: 144 VDTDLEIKAYYAGHVLGAAMFWIKVGSQ-SVVYTGDYN 180
Score = 53 (23.7 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 607 ENLLAELSKMGINGSVERCMTDAESED-GFTVKVQDPEKSMIEVR-AAVTVISAADKNLA 664
+NL L ++GIN V R + + +D G ++ + K+++E + A TV + ++A
Sbjct: 495 QNLTDALKEIGINRHVMRFTSKVKMDDSGPVIRTSERLKTLLEEKLAGWTVTMQENGSIA 554
Query: 665 SRIVK 669
V+
Sbjct: 555 IESVE 559
Score = 41 (19.5 bits), Expect = 0.00076, Sum P(4) = 0.00076
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 634 GFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMEN 673
G KV+ + ++EV+ AV +S + A I++ ++N
Sbjct: 365 GGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404
Score = 39 (18.8 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C +L++ G +++ DC + +
Sbjct: 19 CLLLSMGGKNIMLDCGMHM 37
>UNIPROTKB|F1RJE8 [details] [associations]
symbol:CPSF3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 KO:K13148 OMA:MAVEYMS GeneTree:ENSGT00700000104485
EMBL:FP102596 RefSeq:XP_003127541.3 Ensembl:ENSSSCT00000003708
GeneID:100523908 KEGG:ssc:100523908 Uniprot:F1RJE8
Length = 599
Score = 115 (45.5 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 324 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383
++V+ GG VLIP+ +G +L + F E LK PIY + + E+ Y W
Sbjct: 227 ETVERGGKVLIPVFALGRAQELCILLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPWT 286
Query: 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 443
Q+ K F +F K I F + P +VF+ L G ++
Sbjct: 287 -NQKIRKTFVQRNMFEF------KHIKAFDRAFADS-----PGPMVVFATPGMLHAGQSL 334
Query: 444 HLLRRWSGDHNSLLVL 459
+ R+W+G+ +++++
Sbjct: 335 QIFRKWAGNEKNMVIM 350
Score = 65 (27.9 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 94 FIDVVLISS-PMGMLG-LPFLTRMEGFSAKIYITEAAARIGQLMMEE 138
F+D V+IS + G LP+ + M G+ IY+T+ I +++E+
Sbjct: 60 FLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLED 106
Score = 60 (26.2 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 157 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213
GP +M + P L RKIA+ + G +KDC+ K + +
Sbjct: 88 GPIYMTQPTQAICPILLEDYRKIAVDKKGE---ANFFTSQMIKDCMKKAVAVHLHQTVQV 144
Query: 214 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249
+ L IKA+ +G +GA + I ++ Y N
Sbjct: 145 DDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 180
Score = 39 (18.8 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 17 CHILNVSGFHVLFDCPLDL 35
C ++++ G +V+ DC + +
Sbjct: 19 CILVSIGGKNVMLDCGMHM 37
>TAIR|locus:2172843 [details] [associations]
symbol:CPSF100 "cleavage and polyadenylation specificity
factor 100" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=NAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS;NAS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006306 "DNA methylation" evidence=RCA] [GO:0006342 "chromatin
silencing" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006397 "mRNA processing" evidence=RCA] [GO:0007267 "cell-cell
signaling" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016569 "covalent chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR001279 InterPro:IPR027075
Pfam:PF00753 SMART:SM00849 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006378 EMBL:AB005244 GO:GO:0003723
GO:GO:0016787 GO:GO:0005847 GO:GO:0006379 eggNOG:COG1236 KO:K14402
InterPro:IPR022712 InterPro:IPR025069 PANTHER:PTHR11203:SF5
Pfam:PF10996 Pfam:PF13299 SMART:SM01027 EMBL:AF283277 EMBL:AY034982
EMBL:BT004374 IPI:IPI00521104 RefSeq:NP_197776.1 UniGene:At.25191
ProteinModelPortal:Q9LKF9 SMR:Q9LKF9 IntAct:Q9LKF9 STRING:Q9LKF9
PaxDb:Q9LKF9 PRIDE:Q9LKF9 EnsemblPlants:AT5G23880.1 GeneID:832453
KEGG:ath:AT5G23880 TAIR:At5g23880 HOGENOM:HOG000264343
InParanoid:Q9LKF9 OMA:NNPFQFK PhylomeDB:Q9LKF9
ProtClustDB:CLSN2686300 Genevestigator:Q9LKF9 GermOnline:AT5G23880
GO:GO:0035194 Uniprot:Q9LKF9
Length = 739
Score = 88 (36.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 33/136 (24%), Positives = 57/136 (41%)
Query: 326 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCK 385
++ GG+VL+P++ G L+LL + PIY ++ V+ + Y + EW+
Sbjct: 227 LEVGGNVLLPVDTAGRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSD 286
Query: 386 QRQEKL-FSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 442
+ S D F HV L+ K + A PK +V + SL G
Sbjct: 287 SISKSFETSRDNAFLLRHVTLLINKT-DLDNAPPGPK---------VVLASMASLEAGFA 336
Query: 443 IHLLRRWSGDHNSLLV 458
+ W+ D +L++
Sbjct: 337 REIFVEWANDPRNLVL 352
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 93 SFIDVVLISSPMGM-LG-LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQF 149
S ID VL+S P + +G LP+ + G SA +Y TE R+G L M + + F
Sbjct: 53 STIDAVLLSHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDF 111
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 1 MKFTCLCQGGGFNFPPC-HILNVSGFHVLFDCPL-DLSALTVFSPL 44
++ T LC G +N P +++++ GF+ L DC DL ++ PL
Sbjct: 5 VQVTPLC--GVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPL 48
>FB|FBgn0027873 [details] [associations]
symbol:Cpsf100 "Cleavage and polyadenylation specificity
factor 100" species:7227 "Drosophila melanogaster" [GO:0006379
"mRNA cleavage" evidence=ISS;NAS] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS;IMP;NAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=NAS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006398 "histone mRNA 3'-end
processing" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001279 InterPro:IPR027075 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 EMBL:AE014297 GO:GO:0022008 GO:GO:0006378
GO:GO:0003723 GO:GO:0016787 GO:GO:0005847 GO:GO:0006379
eggNOG:COG1236 KO:K14402 InterPro:IPR022712 InterPro:IPR025069
InterPro:IPR011108 PANTHER:PTHR11203:SF5 Pfam:PF10996 Pfam:PF13299
SMART:SM01027 GeneTree:ENSGT00700000104551 OMA:NNPFQFK
GO:GO:0006398 EMBL:AF160933 RefSeq:NP_651658.1 RefSeq:NP_733264.1
UniGene:Dm.1362 ProteinModelPortal:Q9V3D6 SMR:Q9V3D6 IntAct:Q9V3D6
STRING:Q9V3D6 PaxDb:Q9V3D6 PRIDE:Q9V3D6 EnsemblMetazoa:FBtr0085357
GeneID:43426 KEGG:dme:Dmel_CG1957 UCSC:CG1957-RA CTD:43426
FlyBase:FBgn0027873 InParanoid:Q8IML7 OrthoDB:EOG4XD261
PhylomeDB:Q9V3D6 GenomeRNAi:43426 NextBio:833860 Bgee:Q9V3D6
GermOnline:CG1957 Uniprot:Q9V3D6
Length = 756
Score = 86 (35.3 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 42/185 (22%), Positives = 85/185 (45%)
Query: 323 IDSVKAGGSVLIPINRVGVFLQL---LEQIAIFMECSSLKIPIYIISSVAEELLAYTNTI 379
+ +V+ G+VLI ++ G L+L L+Q+ E + + ++++V+ ++ + +
Sbjct: 224 LQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQ 283
Query: 380 PEWLCKQRQEKLFSG---DPL-FAHVKLIKE-KKIHVFPAVHSPKLLMNWQEPCIVFSPH 434
EW+ + K F G +P F H++L ++ PA PK+++ +P
Sbjct: 284 IEWM-SDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPA--GPKVVL-------ASTP- 332
Query: 435 WSLRLGPTIHLLRRWSGDHNSLLVLENEVD-AELAV------LPFKPISMKVLQCSFLSG 487
L G T L +W+ + N+ ++L LA+ P K I + V + L G
Sbjct: 333 -DLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMELVENCAPGKQIELDVRRRVDLEG 391
Query: 488 KKLQK 492
+L++
Sbjct: 392 AELEE 396
Score = 70 (29.7 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 92 VSFIDVVLISSPMGM-LG-LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQF 149
V +D VL+S P LG LP+L G + IY T ++GQ+ M +L + F
Sbjct: 52 VHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDF 111
Score = 58 (25.5 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 15 PPCHILNVSGFHVLFDCPLD 34
PPC+IL + +L DC D
Sbjct: 18 PPCYILQIDDVRILLDCGWD 37
>WB|WBGene00017313 [details] [associations]
symbol:cpsf-2 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0040027 "negative regulation
of vulval development" evidence=IMP] InterPro:IPR001279
InterPro:IPR027075 SMART:SM00849 Pfam:PF07521 GO:GO:0005634
GO:GO:0009792 GO:GO:0016246 GO:GO:0006397 GO:GO:0003723
GO:GO:0016787 GO:GO:0000910 GO:GO:0040035 GO:GO:0040027
eggNOG:COG1236 KO:K14402 InterPro:IPR022712 InterPro:IPR025069
InterPro:IPR011108 PANTHER:PTHR11203:SF5 Pfam:PF10996 Pfam:PF13299
SMART:SM01027 GeneTree:ENSGT00700000104551 HOGENOM:HOG000264343
OMA:NNPFQFK EMBL:FO080529 PIR:T32487 RefSeq:NP_504822.1
ProteinModelPortal:O17403 SMR:O17403 STRING:O17403 PaxDb:O17403
EnsemblMetazoa:F09G2.4 GeneID:179103 KEGG:cel:CELE_F09G2.4
CTD:179103 WormBase:F09G2.4 InParanoid:O17403 NextBio:903938
Uniprot:O17403
Length = 843
Score = 82 (33.9 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 95 IDVVLIS--SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQF 149
I VLIS P+ + GLP+L G +A +Y T ++GQ+ + +++ +++ +F
Sbjct: 55 ISAVLISHPDPLHLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMVYSHLDVEEF 111
Score = 78 (32.5 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 34/138 (24%), Positives = 58/138 (42%)
Query: 325 SVKAGGSVLIPINRVGVFLQL---LEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPE 381
+V+ G +I I+ G L+L L+Q+ + + ++S VA ++ + + E
Sbjct: 225 TVRQKGDCMIVIDTAGRVLELAHLLDQLWSNADAGLSTYNLVMMSHVASSVVQFAKSQLE 284
Query: 382 WLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 441
W+ EKLF D A K HV HS + LM + P +V + G
Sbjct: 285 WM----NEKLFKYDSSSARYNPFTLK--HV-TLCHSHQELMRVRSPKVVLCSSQDMESGF 337
Query: 442 TIHLLRRWSGDHNSLLVL 459
+ L W D + ++L
Sbjct: 338 SRELFLDWCSDPRNGVIL 355
Score = 54 (24.1 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 15 PPCHILNVSGFHVLFDCPLD 34
P C++L V G ++L DC D
Sbjct: 18 PLCYLLQVDGDYILLDCGWD 37
>UNIPROTKB|O17403 [details] [associations]
symbol:cpsf-2 "Probable cleavage and polyadenylation
specificity factor subunit 2" species:6239 "Caenorhabditis elegans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001279
InterPro:IPR027075 SMART:SM00849 Pfam:PF07521 GO:GO:0005634
GO:GO:0009792 GO:GO:0016246 GO:GO:0006397 GO:GO:0003723
GO:GO:0016787 GO:GO:0000910 GO:GO:0040035 GO:GO:0040027
eggNOG:COG1236 KO:K14402 InterPro:IPR022712 InterPro:IPR025069
InterPro:IPR011108 PANTHER:PTHR11203:SF5 Pfam:PF10996 Pfam:PF13299
SMART:SM01027 GeneTree:ENSGT00700000104551 HOGENOM:HOG000264343
OMA:NNPFQFK EMBL:FO080529 PIR:T32487 RefSeq:NP_504822.1
ProteinModelPortal:O17403 SMR:O17403 STRING:O17403 PaxDb:O17403
EnsemblMetazoa:F09G2.4 GeneID:179103 KEGG:cel:CELE_F09G2.4
CTD:179103 WormBase:F09G2.4 InParanoid:O17403 NextBio:903938
Uniprot:O17403
Length = 843
Score = 82 (33.9 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 95 IDVVLIS--SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQF 149
I VLIS P+ + GLP+L G +A +Y T ++GQ+ + +++ +++ +F
Sbjct: 55 ISAVLISHPDPLHLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMVYSHLDVEEF 111
Score = 78 (32.5 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 34/138 (24%), Positives = 58/138 (42%)
Query: 325 SVKAGGSVLIPINRVGVFLQL---LEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPE 381
+V+ G +I I+ G L+L L+Q+ + + ++S VA ++ + + E
Sbjct: 225 TVRQKGDCMIVIDTAGRVLELAHLLDQLWSNADAGLSTYNLVMMSHVASSVVQFAKSQLE 284
Query: 382 WLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 441
W+ EKLF D A K HV HS + LM + P +V + G
Sbjct: 285 WM----NEKLFKYDSSSARYNPFTLK--HV-TLCHSHQELMRVRSPKVVLCSSQDMESGF 337
Query: 442 TIHLLRRWSGDHNSLLVL 459
+ L W D + ++L
Sbjct: 338 SRELFLDWCSDPRNGVIL 355
Score = 54 (24.1 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 15 PPCHILNVSGFHVLFDCPLD 34
P C++L V G ++L DC D
Sbjct: 18 PLCYLLQVDGDYILLDCGWD 37
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 678 644 0.00094 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 624 (66 KB)
Total size of DFA: 379 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.59u 0.14s 50.73t Elapsed: 00:00:03
Total cpu time: 50.60u 0.14s 50.74t Elapsed: 00:00:03
Start: Fri May 10 03:22:13 2013 End: Fri May 10 03:22:16 2013