Query 005761
Match_columns 678
No_of_seqs 346 out of 1990
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 06:45:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005761.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005761hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iek_A Ribonuclease TTHA0252; 100.0 5.1E-71 1.8E-75 611.0 39.5 405 1-536 1-431 (431)
2 2i7t_A Cleavage and polyadenyl 100.0 1.2E-65 4E-70 573.4 34.3 411 1-538 12-458 (459)
3 3af5_A Putative uncharacterize 100.0 9.4E-57 3.2E-61 520.2 37.5 419 1-536 189-650 (651)
4 2xr1_A Cleavage and polyadenyl 100.0 5.2E-56 1.8E-60 512.7 38.1 416 1-536 184-639 (640)
5 2ycb_A Beta-CAsp RNAse, cleava 100.0 1.6E-55 5.3E-60 509.1 37.3 417 1-536 180-635 (636)
6 2i7x_A Protein CFT2; polyadeny 100.0 1.2E-48 4.1E-53 454.3 38.7 345 1-465 1-371 (717)
7 3zq4_A Ribonuclease J 1, RNAse 100.0 2.7E-40 9.2E-45 375.2 24.4 379 1-539 9-427 (555)
8 3bk2_A RNAse J, metal dependen 100.0 2.5E-38 8.7E-43 360.4 30.7 382 1-540 17-443 (562)
9 2az4_A Hypothetical protein EF 100.0 4.7E-31 1.6E-35 291.5 30.3 404 1-536 7-429 (429)
10 4b87_A DNA cross-LINK repair 1 99.9 7.5E-26 2.6E-30 243.9 18.2 285 92-511 49-345 (367)
11 3zdk_A 5' exonuclease apollo; 99.9 3.1E-23 1E-27 220.8 18.2 270 93-513 23-304 (336)
12 1y44_A Ribonuclease Z; zinc-de 99.6 7.4E-16 2.5E-20 162.9 10.8 137 1-237 1-151 (320)
13 2cbn_A Ribonuclease Z; phospho 99.6 7.5E-16 2.6E-20 161.6 8.7 137 1-237 2-153 (306)
14 1zkp_A Hypothetical protein BA 99.6 3.1E-15 1E-19 154.0 9.7 160 1-272 25-199 (268)
15 3g1p_A Protein PHNP; C-P lyase 99.6 2.4E-15 8.1E-20 154.3 7.0 158 1-272 3-187 (258)
16 3zwf_A Zinc phosphodiesterase 99.5 2.7E-14 9.2E-19 154.1 11.7 90 1-136 1-105 (368)
17 3md7_A Beta-lactamase-like; ss 99.4 1.8E-13 6E-18 143.0 10.2 125 91-273 96-231 (293)
18 3jxp_A Coenzyme PQQ synthesis 99.4 2.6E-13 8.8E-18 143.6 8.2 177 1-273 3-223 (321)
19 2e7y_A TRNAse Z; tRNA maturati 99.4 1.8E-13 6.1E-18 141.2 6.5 160 1-272 1-208 (280)
20 3kl7_A Putative metal-dependen 99.4 9.9E-12 3.4E-16 125.6 17.1 139 1-272 30-181 (235)
21 2r2d_A AGR_PTI_140P, Zn-depend 99.2 5.4E-11 1.8E-15 122.4 14.5 108 90-250 99-215 (276)
22 1ztc_A Hypothetical protein TM 99.2 2E-11 6.9E-16 121.9 6.4 152 1-249 13-175 (221)
23 3m8t_A 'BLR6230 protein; subcl 99.1 5.1E-11 1.7E-15 123.7 7.8 150 3-249 47-203 (294)
24 3dha_A N-acyl homoserine lacto 99.1 5.5E-11 1.9E-15 120.9 7.9 99 90-250 96-197 (254)
25 3rpc_A Possible metal-dependen 99.1 1.3E-09 4.3E-14 111.9 16.5 167 1-272 5-190 (264)
26 2wyl_A L-ascorbate-6-phosphate 99.1 7.4E-10 2.5E-14 119.0 15.0 98 92-251 107-229 (360)
27 2xf4_A Hydroxyacylglutathione 99.1 1.3E-10 4.6E-15 114.5 7.4 147 1-249 1-152 (210)
28 3esh_A Protein similar to meta 99.1 1.6E-10 5.5E-15 119.5 8.2 157 14-249 47-207 (280)
29 1k07_A FEZ-1 beta-lactamase; m 99.1 3E-10 1E-14 116.2 10.1 152 3-249 17-175 (263)
30 3bv6_A Metal-dependent hydrola 99.0 1.8E-09 6.3E-14 116.7 15.2 97 92-250 131-253 (379)
31 3adr_A Putative uncharacterize 99.0 2.2E-09 7.4E-14 109.3 13.5 152 2-250 5-167 (261)
32 2zwr_A Metallo-beta-lactamase 99.0 7.4E-10 2.5E-14 109.1 9.7 143 1-249 1-145 (207)
33 3aj3_A MLR6805 protein, 4-pyri 99.0 5E-10 1.7E-14 115.1 8.5 181 1-249 4-208 (274)
34 3l6n_A Metallo-beta-lactamase; 99.0 4E-10 1.4E-14 111.8 7.2 128 13-250 29-160 (219)
35 1p9e_A Methyl parathion hydrol 98.9 3.8E-09 1.3E-13 112.1 9.6 151 16-250 98-257 (331)
36 1sml_A Protein (penicillinase) 98.8 4E-09 1.4E-13 108.2 7.8 142 14-249 37-185 (269)
37 4efz_A Metallo-beta-lactamase 98.8 1.1E-08 3.8E-13 106.7 11.1 160 1-249 5-175 (298)
38 4ax1_B Metallo-beta-lactamase 98.8 2.2E-09 7.4E-14 111.6 5.4 135 14-238 57-194 (303)
39 2vw8_A PA1000, PQSE; quinolone 98.8 2.1E-08 7.1E-13 104.7 12.3 159 3-249 16-181 (303)
40 1e5d_A Rubredoxin\:oxygen oxid 98.8 3E-09 1E-13 115.5 5.9 97 90-250 67-167 (402)
41 1m2x_A Class B carbapenemase B 98.8 5.4E-09 1.9E-13 104.1 7.2 127 13-249 25-155 (223)
42 2fhx_A SPM-1; metallo-beta-lac 98.8 1.2E-08 4E-13 103.0 9.3 163 3-250 19-186 (246)
43 3iog_A Beta-lactamase; hydrola 98.8 1.3E-08 4.4E-13 101.2 8.4 89 3-137 12-102 (227)
44 2zo4_A Metallo-beta-lactamase 98.8 1.2E-08 4.1E-13 107.0 8.5 166 14-250 21-192 (317)
45 1vjn_A Zn-dependent hydrolase 98.7 5.3E-08 1.8E-12 97.1 12.5 59 210-272 80-145 (220)
46 4hl2_A Beta-lactamase NDM-1; s 98.7 2.7E-09 9.3E-14 107.7 2.4 137 12-250 45-183 (243)
47 2gcu_A Putative hydroxyacylglu 98.7 1.7E-08 5.6E-13 102.5 8.1 130 1-249 3-143 (245)
48 2p18_A Glyoxalase II; metallop 98.7 1.6E-08 5.3E-13 106.4 7.7 87 93-249 83-181 (311)
49 3q6v_A Beta-lactamase; metallo 98.7 2.8E-08 9.6E-13 99.1 9.1 89 3-137 15-105 (233)
50 2bib_A CBPE, teichoic acid pho 98.7 2.2E-08 7.5E-13 113.5 8.5 176 1-250 6-205 (547)
51 1mqo_A Beta-lactamase II; alph 98.7 7.1E-09 2.4E-13 103.5 4.0 126 14-249 40-169 (227)
52 2ohh_A Type A flavoprotein FPR 98.7 2E-08 6.8E-13 109.0 7.6 97 91-250 72-172 (404)
53 1a7t_A Metallo-beta-lactamase; 98.7 1.2E-08 4.2E-13 102.2 5.4 127 14-250 36-166 (232)
54 3tp9_A Beta-lactamase and rhod 98.7 5.6E-09 1.9E-13 116.2 3.2 138 1-250 4-151 (474)
55 1ycg_A Nitric oxide reductase; 98.7 1.7E-08 5.8E-13 109.4 6.5 96 90-249 68-167 (398)
56 2qed_A Hydroxyacylglutathione 98.6 2.2E-08 7.5E-13 102.4 6.1 124 1-249 8-135 (258)
57 3hnn_A Putative diflavin flavo 98.6 1.8E-08 6.1E-13 103.1 4.9 97 91-250 76-176 (262)
58 4dik_A Flavoprotein; TM0755, e 98.6 3.6E-08 1.2E-12 107.4 7.1 127 15-250 52-182 (410)
59 2q9u_A A-type flavoprotein; fl 98.5 7.6E-08 2.6E-12 105.0 7.6 96 91-250 74-173 (414)
60 2p97_A Hypothetical protein; p 98.5 2.9E-08 9.8E-13 97.4 3.6 118 12-249 21-138 (201)
61 1qh5_A Glyoxalase II, protein 98.5 6.2E-08 2.1E-12 99.1 6.2 127 1-249 1-135 (260)
62 4ad9_A Lactb2, beta-lactamase- 98.5 1.2E-08 4.1E-13 105.8 0.1 132 14-250 31-167 (289)
63 1xm8_A Glyoxalase II; structur 98.5 6.1E-08 2.1E-12 98.8 4.8 84 94-249 46-132 (254)
64 3r2u_A Metallo-beta-lactamase 98.5 1.3E-07 4.3E-12 105.1 6.6 136 1-249 25-170 (466)
65 2y8b_A Metallo-B-lactamase; hy 98.4 1.5E-07 5.3E-12 96.3 4.7 132 13-250 66-199 (265)
66 1jjt_A IMP-1 metallo beta-lact 98.4 7.9E-08 2.7E-12 96.0 2.0 74 12-131 30-105 (228)
67 2p4z_A Metal-dependent hydrola 98.0 5.2E-06 1.8E-10 85.8 5.4 71 14-129 32-104 (284)
68 4eyb_A Beta-lactamase NDM-1; m 97.8 6E-06 2E-10 84.7 2.5 75 12-131 72-148 (270)
69 2cfu_A SDSA1; SDS-hydrolase, l 97.6 9.7E-05 3.3E-09 85.2 9.6 78 14-132 122-204 (658)
70 2yhe_A SEC-alkyl sulfatase; hy 96.2 6.8E-05 2.3E-09 86.3 0.0 75 15-130 133-212 (668)
71 3h3e_A Uncharacterized protein 96.6 0.00095 3.3E-08 68.1 3.4 29 96-129 63-93 (267)
72 3rpc_A Possible metal-dependen 67.6 4.6 0.00016 40.1 4.7 52 485-536 202-264 (264)
73 2wyl_A L-ascorbate-6-phosphate 64.1 6.3 0.00022 41.2 5.1 59 485-543 257-330 (360)
74 3bv6_A Metal-dependent hydrola 63.9 6.3 0.00022 41.6 5.1 59 485-543 282-355 (379)
75 3g1p_A Protein PHNP; C-P lyase 38.3 67 0.0023 31.2 7.5 74 423-513 153-226 (258)
76 2e7y_A TRNAse Z; tRNA maturati 29.5 51 0.0017 32.2 4.9 52 485-536 220-280 (280)
77 3md7_A Beta-lactamase-like; ss 23.7 83 0.0028 31.3 5.3 54 484-537 237-292 (293)
78 1y44_A Ribonuclease Z; zinc-de 23.5 77 0.0026 31.8 5.1 100 425-541 202-309 (320)
No 1
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=100.00 E-value=5.1e-71 Score=610.95 Aligned_cols=405 Identities=19% Similarity=0.228 Sum_probs=339.8
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|||++||++ +++|+|||+|+.++.+||+|||+.... . ... ..+
T Consensus 1 M~i~~LG~~-~~vg~s~~li~~~~~~iLID~G~~~~~-----------~---------------~~~---------~~~- 43 (431)
T 3iek_A 1 MRIVPFGAA-REVTGSAHLLLAGGRRVLLDCGMFQGK-----------E---------------EAR---------NHA- 43 (431)
T ss_dssp CEEEECSCS-SSSSCCCEEEEETTEEEEECCCCCCGG-----------G---------------GGG---------GGS-
T ss_pred CEEEEeCCC-CCCCCcEEEEEECCeEEEEeCCCCcch-----------h---------------hcc---------chh-
Confidence 999999998 899999999999999999999995221 0 000 001
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCc
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~ 158 (678)
...+++.+||+|||||+ ||+|+||+|.+ .+|++|||||++|+++.+.++.|+.++++
T Consensus 44 ------~~~~~~~~Id~VllTH~H~DH~gglp~l~~-~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~-------------- 102 (431)
T 3iek_A 44 ------PFGFDPKEVDAVLLTHAHLDHVGRLPKLFR-EGYRGPVYATRATVLLMEIVLEDALKVMD-------------- 102 (431)
T ss_dssp ------CCSSCGGGCCEEECSCCCHHHHTTHHHHHH-TTCCSCEEECHHHHHHHHHHHHHHHHHCS--------------
T ss_pred ------hcCCCcccCCEEEECCCChHHhccHHHHHH-cCCCCeEEEcHHHHHHHHHHHHHHHhhcc--------------
Confidence 12346789999999999 99999999998 68899999999999999999988764421
Q ss_pred ccchhhhhhhchhhhhhhcccCCCCCCCCCCchH--HHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEe
Q 005761 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIIS 236 (678)
Q Consensus 159 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~ 236 (678)
.++| +|++.++.+++.++|++++++ |+++++++++||++||++|.|+
T Consensus 103 ------------------------------~~~y~~~~~~~~~~~~~~l~~~~~~~l-~g~~v~~~~agH~~Gs~~~~i~ 151 (431)
T 3iek_A 103 ------------------------------EPFFGPEDVEEALGHLRPLEYGEWLRL-GALSLAFGQAGHLPGSAFVVAQ 151 (431)
T ss_dssp ------------------------------SCSSCHHHHHHHHHTEEECCTTCCEEE-TTEEEEEEECCSSTTCEEEEEE
T ss_pred ------------------------------cCCCCHHHHHHHHhccEEcCCCCeEEe-CCEEEEEEeCCCCcCceEEEEE
Confidence 1456 899999999999999999999 7899999999999999999999
Q ss_pred eCCeeEEEecCCCCCcCCCCcccccccCCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcccHHHHHHHH
Q 005761 237 GAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLA 316 (678)
Q Consensus 237 ~~~~~I~Y~sgD~~~~~h~~~~d~~~l~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~~~~e~e~l~ 316 (678)
.++++|+| |||+.....+.-.+.....++|+|| +||||++ +.|+++. ++.+
T Consensus 152 ~~~~~ilf-sGD~~~~~~~~l~~~~~~~~~D~LI-------------~EsTy~~----------~~h~~~~-----~~~~ 202 (431)
T 3iek_A 152 GEGRTLVY-SGDLGNREKDVLPDPSLPPLADLVL-------------AEGTYGD----------RPHRPYR-----ETVR 202 (431)
T ss_dssp ETTEEEEE-CCCCCCTTSSSSCCCCBCCCCSEEE-------------EECTTTT----------CCCCCHH-----HHHH
T ss_pred ECCEEEEE-eCCCCCCCCcccCCccccCCccEEE-------------EEcccCC----------cCCCChH-----HHHH
Confidence 99999999 9999432211100111233444443 7889988 3454432 2346
Q ss_pred HHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCC-ceeEEEEChhHHHHHHHHHhcHHHHhHHHHHHHhCCC
Q 005761 317 FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 395 (678)
Q Consensus 317 ~~~~~I~~tl~~GG~VLIP~~a~Gr~qELl~~L~~~~~~~~l-~~pIy~~s~~a~~~~~~~~~~~ewl~~~~~~~~~~~~ 395 (678)
+|++.|.+++++||+||||+|++||+|||+.+|+++|++ + ++|||++||||.+++++|+.++|||++..++.+..++
T Consensus 203 ~l~~~i~~~~~~gg~vlIp~fa~gR~qell~~l~~~~~~--~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (431)
T 3iek_A 203 EFLEILEKTLSQGGKVLIPTFAVERAQEILYVLYTHGHR--LPRAPIYLDSPMAGRVLSLYPRLVRYFSEEVQAHFLQGK 280 (431)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHGGG--SCCCCEEEECHHHHHHHHHGGGGGGGSCHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCeEEEEeccchHHHHHHHHHHHHHHh--ccCCCEEEeChHHHHHHHHHHHhHHHHHHHHHHHHhcCC
Confidence 688999999999999999999999999999999999988 6 7999999999999999999999999999999888888
Q ss_pred CCC--CceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcchhcccC---
Q 005761 396 PLF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVL--- 470 (678)
Q Consensus 396 ~pF--~~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~~~~tl~--- 470 (678)
+|| ++++++++ .++++.++..++||||||++|||++|+++++|++|++||+|+||| +|||+++|++
T Consensus 281 ~pf~~~~~~~~~~--------~~~~~~~~~~~~p~viia~~gm~~~G~~~~~l~~~~~~~~n~ii~-~gyq~~gt~g~~l 351 (431)
T 3iek_A 281 NPFRPAGLEVVEH--------TEASKALNRAPGPMVVLAGSGMLAGGRILHHLKHGLSDPRNALVF-VGYQPQGGLGAEI 351 (431)
T ss_dssp CTTCCTTEEECCS--------HHHHHHHHHSCSSEEEEESCTTSSSSHHHHHHHHHTTCTTCEEEE-CSCCCTTSHHHHH
T ss_pred CCCCCCCeEEeCC--------HHHHHHHhcCCCCeEEEecCCCCCCChHHHHHHHhcCCCCCeEEE-ECCCCCCChHHHh
Confidence 998 67777665 444445566799999999999999999999999999999999999 8999999973
Q ss_pred -----------CCCceeeEEEEe-ecccCCCHhhHHHHHHhhCCCEEEEecCCccccccccc----CCceEeecCCCcEE
Q 005761 471 -----------PFKPISMKVLQC-SFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDV----TSFSVSHYSENETI 534 (678)
Q Consensus 471 -----------~~~~v~~~v~~~-~fs~had~~~l~~li~~~~P~~vilvHg~~~~~~~l~~----~~~~v~~p~~ge~v 534 (678)
...+++|+|+++ +||||||+++|++|++.++ +|+|||||++.+..|++ .+.++++|.+||++
T Consensus 352 ~~~~~~v~~~g~~~~v~a~v~~~~~~saHad~~~l~~~~~~~~--~v~lvHge~~~~~~l~~~l~~~~~~~~~p~~~~~~ 429 (431)
T 3iek_A 352 IARPPAVRILGEEVPLRASVHTLGGFSGHAGQDELLDWLQGEP--RVVLVHGEEEKLLALGKLLALRGQEVSLARFGEGV 429 (431)
T ss_dssp HTCCSEEEETTEEEECCSEEEECGGGCSSCCHHHHHHHHTTCS--EEEEESSCHHHHHHHHHHHHHTTCEEEECCTTCCE
T ss_pred hcCCcEEEECCEEEEEEEEEEEECCccccCCHHHHHHHHHhCC--eEEEECCCHHHHHHHHHHHHHhCCcEEECCCCCEE
Confidence 235799999999 6999999999999999775 99999999999999973 45699999999998
Q ss_pred Ee
Q 005761 535 HI 536 (678)
Q Consensus 535 ~i 536 (678)
++
T Consensus 430 ~~ 431 (431)
T 3iek_A 430 PV 431 (431)
T ss_dssp EC
T ss_pred eC
Confidence 75
No 2
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=100.00 E-value=1.2e-65 Score=573.43 Aligned_cols=411 Identities=20% Similarity=0.300 Sum_probs=303.9
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|++++||++ ++++++||+|+.++.+||+|||+.... .+.. ..|+
T Consensus 12 m~i~~LG~~-~~vg~s~~li~~~~~~iLID~G~~~~~--------~~~~---------------------------~~~~ 55 (459)
T 2i7t_A 12 LLIRPLGAG-QEVGRSCIILEFKGRKIMLDCGIHPGL--------EGMD---------------------------ALPY 55 (459)
T ss_dssp EEEEEEESS-SSSSSCEEEEEETTEEEEECCCCCTTS--------CGGG---------------------------GSCC
T ss_pred EEEEEEecC-CCCCCCEEEEEECCeEEEEeCCCCcCc--------cccc---------------------------ccCc
Confidence 799999998 899999999999999999999997321 0000 1222
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCc
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~ 158 (678)
. ..+++.+||+|||||+ ||+||||++.+..+|+++||+|++|.++++.++.|+.++++.
T Consensus 56 l------~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~~~~~~~------------- 116 (459)
T 2i7t_A 56 I------DLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNI------------- 116 (459)
T ss_dssp G------GGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHHCC-----------------
T ss_pred c------cccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHHHHHHHHHHHHHHhcc-------------
Confidence 2 2346789999999999 999999999987899999999999999999988887544320
Q ss_pred ccchhhhhhhchhhhhhhcccCCCCCCCCCCchH--HHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEe
Q 005761 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIIS 236 (678)
Q Consensus 159 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~ 236 (678)
..+.++| +++..++++++.++|++++++ ++++++++++||++||++|.|+
T Consensus 117 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi~v~~~~~GH~~Gs~~~~i~ 168 (459)
T 2i7t_A 117 ---------------------------SADDMLYTETDLEESMDKIETINFHEVKEV-AGIKFWCYHAGHVLGAAMFMIE 168 (459)
T ss_dssp --------------------------------CCCHHHHHHHGGGEEEECTTCCEEE-TTEEEEEEECCSSTTCEEEEEE
T ss_pred ---------------------------cccccccCHHHHHHHHhccEEeCCCCEEEE-CCEEEEEEeCCCccCcEEEEEE
Confidence 0123556 778888899999999999999 5899999999999999999999
Q ss_pred eCCeeEEEecCCCCCcCCC--CcccccccCCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcccHHHHHH
Q 005761 237 GAKGNIAYISGSNFASGHA--MDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 314 (678)
Q Consensus 237 ~~~~~I~Y~sgD~~~~~h~--~~~d~~~l~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~~~~e~e~ 314 (678)
.++++|+| |||+...... ...+.. ..++|+|| +||||+++ .|..+. + +
T Consensus 169 ~~~~~il~-sGD~~~~~~~~~~~~~~~-~~~~D~Li-------------~Esty~~~----------~~~~~~---~--~ 218 (459)
T 2i7t_A 169 IAGVKLLY-TGDFSRQEDRHLMAAEIP-NIKPDILI-------------IESTYGTH----------IHEKRE---E--R 218 (459)
T ss_dssp ETTEEEEE-CCSCCCC-----CCCCCC-SSCCSEEE-------------EECTTTTC----------CCCCHH---H--H
T ss_pred ECCcEEEE-eCCCCCCCCcccCCCCcC-CCCCeEEE-------------ECCCCCCC----------CCCChH---H--H
Confidence 99999999 9998422110 000000 12333333 78899873 343322 2 3
Q ss_pred HHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCC-C-ceeEEEEChhHHHHHHHHHhcHHHHhHHHHHHHh
Q 005761 315 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS-L-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 392 (678)
Q Consensus 315 l~~~~~~I~~tl~~GG~VLIP~~a~Gr~qELl~~L~~~~~~~~-l-~~pIy~~s~~a~~~~~~~~~~~ewl~~~~~~~~~ 392 (678)
.++|++.|.+++++||+|+||+|++||+|||+++|+++|++++ + .+|||++|+||.+++++|+.+.+||++..++.+.
T Consensus 219 ~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~~~~~~~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~ 298 (459)
T 2i7t_A 219 EARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQIN 298 (459)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCSSSSHHHHHHHHHHHHHHCGGGTTSCEEEC---------------------------
T ss_pred HHHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHHHHHHhcCCCCCccEEEECHHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 3568899999999999999999999999999999999999864 5 7999999999999999999999999998887654
Q ss_pred CCCCCC--CceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcchhcccC
Q 005761 393 SGDPLF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVL 470 (678)
Q Consensus 393 ~~~~pF--~~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~~~~tl~ 470 (678)
.++|| +|++.+++ .++ ....+||||||++|||++|+++++|++|++||+|+||| +|||+++|++
T Consensus 299 -~~~p~~~~~~~~~~~--------~~~----~~~~~~~viia~~gm~~~g~~~~~l~~~~~~~~~~ii~-~gy~~~gt~g 364 (459)
T 2i7t_A 299 -INNPFVFKHISNLKS--------MDH----FDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVII-AGYCVEGTLA 364 (459)
T ss_dssp -------CCSEEECCC--------TTS----SCCCSSEEEEESCTTCSSHHHHHHHHHHTTCTTCEEEE-CSCCCTTSHH
T ss_pred -ccCCcCCCcceeeCC--------HHH----hcCCCCeEEEEcCcccCCCHHHHHHHHHcCCCCCeEEE-EecCCCCChH
Confidence 56787 56665543 211 13478999999999999999999999999999999999 8999998863
Q ss_pred ---------------CCCceeeEEEEeecccCCCHhhHHHHHHhhCCCEEEEecCCccccccccc-----C------Cce
Q 005761 471 ---------------PFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDV-----T------SFS 524 (678)
Q Consensus 471 ---------------~~~~v~~~v~~~~fs~had~~~l~~li~~~~P~~vilvHg~~~~~~~l~~-----~------~~~ 524 (678)
...+++|+|.+++||+|||+.+|.+||+.++|++|++|||+.+.+..|++ . +++
T Consensus 365 ~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~i~~~~p~~v~~vHGe~~~~~~~~~~l~~~~~~~~~~~~~ 444 (459)
T 2i7t_A 365 KHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIE 444 (459)
T ss_dssp HHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHHHSSCTTCCCE
T ss_pred HHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHHHHhcCCCeEEEeCCCHHHHHHHHHHHHHHhccccccCce
Confidence 23468999999999999999999999999999999999999998877752 1 589
Q ss_pred EeecCCCcEEEeCC
Q 005761 525 VSHYSENETIHIPS 538 (678)
Q Consensus 525 v~~p~~ge~v~i~~ 538 (678)
+++|++||+|++.+
T Consensus 445 ~~~p~~~~~~~~~~ 458 (459)
T 2i7t_A 445 VHNPRNTEAVTLNF 458 (459)
T ss_dssp EECCCTTCCEEEEE
T ss_pred EEeCCCCCEEEEEe
Confidence 99999999999875
No 3
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=100.00 E-value=9.4e-57 Score=520.20 Aligned_cols=419 Identities=18% Similarity=0.258 Sum_probs=329.9
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|++++||++ +++|++||+|+.++.+||+|||+...... .+. ...|.
T Consensus 189 m~i~~LG~~-~~vg~s~~LI~~~~~~ILID~G~~~~~~~------~g~---------------------------~~l~~ 234 (651)
T 3af5_A 189 IRITGLGGF-REVGRSALLVQTDESFVLVDFGVNVAMLN------DPY---------------------------KAFPH 234 (651)
T ss_dssp EEEEEEECS-SSSSCCEEEEEESSCEEEECCCCCGGGTT------CHH---------------------------HHSCC
T ss_pred eEEEEEecC-CCCCCcEEEEEECCcEEEEeCCCChhccc------cch---------------------------hhccc
Confidence 789999998 89999999999999999999999843100 000 01222
Q ss_pred ccccccccCC--CC--CCccEEEecCC--CCCChhhhhccccC-CCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCC
Q 005761 81 YKTVNNLHLW--NV--SFIDVVLISSP--MGMLGLPFLTRMEG-FSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAE 153 (678)
Q Consensus 81 ~~~~~~~~~~--d~--~~ID~IlISH~--dH~g~LP~l~~~~g-f~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~ 153 (678)
+.. ..+ +. .+||+|||||+ ||+||||+|.+ .+ |++|||||++|.++.+.++.|+.++++..
T Consensus 235 l~~----~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~-~~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~------- 302 (651)
T 3af5_A 235 FDA----PEFQYVLREGLLDAIIITHAHLDHCGMLPYLFR-YNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSN------- 302 (651)
T ss_dssp TTC----HHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHH-TTCCCSCEEECHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred ccc----hhhccCcccCCCCEEEECCCChHhhcCHHHHHh-cCCCCceEEEcHHHHHHHHHHHHHHHHHhhhc-------
Confidence 100 002 35 78999999999 99999999987 45 78999999999999999888887654310
Q ss_pred CCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchH--HHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccE
Q 005761 154 ESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGAC 231 (678)
Q Consensus 154 ~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~ 231 (678)
.+.+.| ++++.++.+++.+++++++++.|+++++++++||++||+
T Consensus 303 ---------------------------------~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~ 349 (651)
T 3af5_A 303 ---------------------------------GQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSA 349 (651)
T ss_dssp ---------------------------------TCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCE
T ss_pred ---------------------------------ccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCcCcE
Confidence 113445 778888888999999999999558999999999999999
Q ss_pred EEEEeeCCe--eEEEecCCCCCcC--CCCcccccccCCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcc
Q 005761 232 NWIISGAKG--NIAYISGSNFASG--HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDE 307 (678)
Q Consensus 232 ~~~I~~~~~--~I~Y~sgD~~~~~--h~~~~d~~~l~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~ 307 (678)
+|.|+.++. +|+| |||+.... +..+.+. .+.++|+|| +||||++.. ..|.++.
T Consensus 350 ~~~i~~~~~~~~ilf-tGD~~~~~~~ll~~~~~-~~~~~DvLI-------------~EsT~~~~~--------~~h~s~~ 406 (651)
T 3af5_A 350 IVHLHIGNGLHNIAI-TGDFKFIPTRLLEPANA-KFPRLETLV-------------MESTYGGAN--------DIQMPRE 406 (651)
T ss_dssp EEEEEETTTTTCEEE-CCSCCCSCCSSCCCCCC-BCSSCSEEE-------------EECTTCSTT--------CCCCCHH
T ss_pred EEEEEECCCceEEEE-eCCCCCCcccccccccc-cCCCCCEEE-------------ECCCCCCCC--------CCCCCHH
Confidence 999998888 9999 99994321 1111111 123444443 688998732 1144332
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCCceeEEEEChhHHHHHHHHHhcHHHHhHHH
Q 005761 308 SVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQR 387 (678)
Q Consensus 308 ~~~e~e~l~~~~~~I~~tl~~GG~VLIP~~a~Gr~qELl~~L~~~~~~~~l~~pIy~~s~~a~~~~~~~~~~~ewl~~~~ 387 (678)
+ ..++|++.|.+++++||+||||+|++||+|||+.+|.++|+++.+.+|||++| ++.+++++|..+.+||++..
T Consensus 407 ~-----~~~~l~~~i~~~l~~~g~vlIp~favgR~qell~~l~~~~~~~~l~~~I~~dg-~a~~~~~~~~~~~~~l~~~~ 480 (651)
T 3af5_A 407 E-----AEKRLIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIEVPIYLDG-MIWEATAIHTAYPEYLSRRL 480 (651)
T ss_dssp H-----HHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHHTTTCCCSCEEEES-SHHHHHHHHHTCGGGSCHHH
T ss_pred H-----HHHHHHHHHHHHHhCCCEEEEeccCccHHHHHHHHHHHhhhhcCCCCcEEEec-hHHHHHHHHHHhHHhcCHHH
Confidence 2 23568889999999999999999999999999999999998877789999996 99999999999999999998
Q ss_pred HHHHh-CCCCCC--CceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcc
Q 005761 388 QEKLF-SGDPLF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVD 464 (678)
Q Consensus 388 ~~~~~-~~~~pF--~~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~ 464 (678)
++.++ ...+|| +++..+++ .+..+.....++||||||++|||++|+++++|++|++||+|+||| +||+
T Consensus 481 ~~~~~~~~~~~f~~~~~~~v~~--------~~~~~~~~~~~~~~vIia~~gm~~gg~~~~~l~~~~~~~~~~vi~-sg~~ 551 (651)
T 3af5_A 481 REQIFKEGYNPFLSEIFHPVAN--------SRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPDPKNSIIF-VSYQ 551 (651)
T ss_dssp HHHTTTSSCCSTTCTTEEECCS--------HHHHHHHHHSCSCEEEEESCTTSSSSHHHHHHHHHTTCTTCEEEE-CSCC
T ss_pred HHHHHhccCCCccCCceEEcCC--------HHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHhCCCCCEEEE-eCCC
Confidence 77664 467888 44444432 111111123478999999999999999999999999999999999 8999
Q ss_pred hhcccC-----------------C--CCceeeEEEEee-cccCCCHhhHHHHHHhhC--CCEEEEecCCccccccccc--
Q 005761 465 AELAVL-----------------P--FKPISMKVLQCS-FLSGKKLQKVQPLLKILQ--PKLVLFPEEWRTHVSFSDV-- 520 (678)
Q Consensus 465 ~~~tl~-----------------~--~~~v~~~v~~~~-fs~had~~~l~~li~~~~--P~~vilvHg~~~~~~~l~~-- 520 (678)
.++|++ . ..+++|+|..+. ||+|||+++|.+|++.++ |++|++|||+...+..+++
T Consensus 552 ~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~~~~la~~~ 631 (651)
T 3af5_A 552 AEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSI 631 (651)
T ss_dssp CTTCHHHHHHHTCSEEEEECGGGCEEEEECCSEEEECGGGCSSCCHHHHHHHHHHCBSCCSEEEEESSCHHHHHHHHHHH
T ss_pred CCCcHHHHHHhccceeeehhcCCCceEEEeEEEEEEcCcccCcCCHHHHHHHHHHhhcCCCEEEEEcCCHHHHHHHHHHH
Confidence 988832 1 234788899998 999999999999999999 9999999999998877752
Q ss_pred ---CCceEeecCCCcEEEe
Q 005761 521 ---TSFSVSHYSENETIHI 536 (678)
Q Consensus 521 ---~~~~v~~p~~ge~v~i 536 (678)
.|+++++|.+||++++
T Consensus 632 ~~~~g~~~~~p~~g~~~~l 650 (651)
T 3af5_A 632 HRKFGISTRAPNNLDTIRL 650 (651)
T ss_dssp HHHHCCEEECCCTTCEEEC
T ss_pred HHhcCCeEEECCCCCEEEe
Confidence 3899999999999986
No 4
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=100.00 E-value=5.2e-56 Score=512.70 Aligned_cols=416 Identities=15% Similarity=0.238 Sum_probs=317.2
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|++++||++ +++|++||+|+.++.+||+|||+.... + . . ..|.
T Consensus 184 m~I~~LG~~-~evg~s~~LI~~~~~~ILID~G~~~~~---------~-~-----------------~---------~l~~ 226 (640)
T 2xr1_A 184 VRVTALGGC-KEVGRSCFLLSTPESRILIDCGVNVGS---------D-E-----------------N---------MTPY 226 (640)
T ss_dssp CEEEEEECS-SSSBCCEEEEECSSCEEEECCCCBCSS---------C-S-----------------S---------CCCC
T ss_pred eEEEEEecC-CCCCCcEEEEEECCeEEEEeCCCCccc---------c-c-----------------c---------cccc
Confidence 799999998 899999999999999999999998321 0 0 0 1122
Q ss_pred ccccccccCC-CCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCC
Q 005761 81 YKTVNNLHLW-NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSG 157 (678)
Q Consensus 81 ~~~~~~~~~~-d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~ 157 (678)
+. .... +..+||+|||||+ ||+||||+|.+ .+|+++||||++|.++.+.+++|+.++.+..
T Consensus 227 l~----~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~-~~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~----------- 290 (640)
T 2xr1_A 227 LY----VPEVFPLNQIDAVIVTHAHLDHQGLVPLLFK-YGYEGPVYCTPPTRDLMVLLQLDYIDVAAKE----------- 290 (640)
T ss_dssp TT----STTTCSGGGCCEEECCSSCHHHHTTHHHHHH-TTCCSCEEECHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred cc----ccccCCcccCcEEEECCCChhhhccHHHHHh-cCCCCeEEECHHHHHHHHHHHHHHHHHhhhc-----------
Confidence 10 0113 5678999999999 99999999987 3788999999999999999888887654310
Q ss_pred cccchhhhhhhchhhhhhhcccCCCCCCCCCCchH--HHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEE
Q 005761 158 PQWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWII 235 (678)
Q Consensus 158 ~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I 235 (678)
+ +.+.| ++++.++.+++.+++++++++.|+++++++++||++||++|.+
T Consensus 291 ------------------------g-----~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~~~~i 341 (640)
T 2xr1_A 291 ------------------------G-----KKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHF 341 (640)
T ss_dssp ------------------------T-----CCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEE
T ss_pred ------------------------c-----cCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcEEEEE
Confidence 0 12345 6788888889999999999995589999999999999999999
Q ss_pred eeCCe--eEEEecCCCCCcC--CCCcccccccCCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcccHHH
Q 005761 236 SGAKG--NIAYISGSNFASG--HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE 311 (678)
Q Consensus 236 ~~~~~--~I~Y~sgD~~~~~--h~~~~d~~~l~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~~~~e 311 (678)
+.++. +|+| |||+.... +..+.+. ...++|+|+ +||||++... .|.++.+
T Consensus 342 ~~~~~~~~ilf-tGD~~~~~~~ll~~~~~-~~~~~DvLi-------------~EsT~g~~~~--------~h~s~~~--- 395 (640)
T 2xr1_A 342 HIGDGLHNVVF-TGDYKYEKTRLFDPAVN-KFPRVETVI-------------SEATYGNANA--------FQPALKD--- 395 (640)
T ss_dssp EETTTTEEEEE-CCSCCSSCCSSCCCCCC-BCSCCSEEE-------------EECTTCSTTC--------CCCCHHH---
T ss_pred EECCceEEEEE-ECCCCCCCccccccccc-cCCCCcEEE-------------ECCCCCCCcc--------CCCCHHH---
Confidence 98887 9999 99994321 1111100 122334333 7889987321 1443322
Q ss_pred HHHHHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCC-ceeEEEEChhHHHHHHHHHhcHHHHhHHHHHH
Q 005761 312 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 390 (678)
Q Consensus 312 ~e~l~~~~~~I~~tl~~GG~VLIP~~a~Gr~qELl~~L~~~~~~~~l-~~pIy~~s~~a~~~~~~~~~~~ewl~~~~~~~ 390 (678)
...+|++.|.+++++||+||||+|++||+||++.+|.++|++..+ ++|||++| ++.+++++|..+.+||++..++.
T Consensus 396 --~~~~l~~~i~~~~~~~g~vlIp~favGR~qell~~l~~~~~~~~~~~~~V~~dg-~a~~~~~~~~~~~~~l~~~~~~~ 472 (640)
T 2xr1_A 396 --AEKHLQMVVKNTIERGGIAVIPAFAVGRSQEVMIVLEESIRKGLIPEVPVYLDG-MIWEATAIHATHPEYLNNDLRKL 472 (640)
T ss_dssp --HHHHHHHHC--------CEEEECCTTTHHHHHHHHHHHHHHHTSSCCCCEEEES-SHHHHHHHHHHCGGGSCHHHHHH
T ss_pred --HHHHHHHHHHHHHhcCCeEEEEecccchHHHHHHHHHHHHHhCCCCCCcEEEEh-HHHHHHHHHHHhHhhhcHHHHHH
Confidence 335688899999999999999999999999999999999998877 79999996 99999999999999999998776
Q ss_pred Hh-CCCCCC--CceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcchhc
Q 005761 391 LF-SGDPLF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAEL 467 (678)
Q Consensus 391 ~~-~~~~pF--~~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~~~~ 467 (678)
++ ...+|| +++..+++ .+........++||||||++|||++|+++++|++|++||+|+||| +||+.++
T Consensus 473 ~~~~~~~~f~~~~~~~~~~--------~~~~~~~~~~~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~-sg~~~~g 543 (640)
T 2xr1_A 473 IFQKGQNPFLSECFKPVDS--------HEARQKIIQNPQPCVILATSGMMNGGPVMEYFKAFAEDPRNTLVF-VGYQADG 543 (640)
T ss_dssp C------CTTCTTEEEEC---------CHHHHHC----CCCEEEESCTTSSSSHHHHHHHHHSSCTTCEEEE-CSCCCTT
T ss_pred HHhcccCcccCCceEEeCC--------HHHHHHHhcCCCCeEEEeCCCccCCChHHHHHHHhhCCCCCEEEE-ecCCCCC
Confidence 54 457888 44455443 111111112378999999999999999999999999999999999 8999988
Q ss_pred cc-----------------CC--CCceeeEEEEee-cccCCCHhhHHHHHHhhC--CCEEEEecCCccccccccc-----
Q 005761 468 AV-----------------LP--FKPISMKVLQCS-FLSGKKLQKVQPLLKILQ--PKLVLFPEEWRTHVSFSDV----- 520 (678)
Q Consensus 468 tl-----------------~~--~~~v~~~v~~~~-fs~had~~~l~~li~~~~--P~~vilvHg~~~~~~~l~~----- 520 (678)
|+ +. ..+++|+|..+. ||+|||+++|.+|++.++ |++|++|||+...+..+++
T Consensus 544 t~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~~~~~a~~~~~~ 623 (640)
T 2xr1_A 544 TIGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQVVDGFSGHSDRRQLMEYVKRMQPRPERVFTEHGDEKACVDLASSVYKK 623 (640)
T ss_dssp CHHHHHHTTCCC-----------CCCCCSEEEECCCCSCSCCHHHHHHHHHTCBSCCSEEEEESSCHHHHHHHHHHHHHH
T ss_pred CHHHHHhhccceeeeeccCCCceEEeeeEEEEEEccccccCCHHHHHHHHHHhccCCCEEEEECCCHHHHHHHHHHHHHH
Confidence 83 12 345889999998 999999999999999998 9999999999998877752
Q ss_pred CCceEeecCCCcEEEe
Q 005761 521 TSFSVSHYSENETIHI 536 (678)
Q Consensus 521 ~~~~v~~p~~ge~v~i 536 (678)
.|+++++|.+||++++
T Consensus 624 ~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 624 LKIETRALTNLETVRL 639 (640)
T ss_dssp HCCEEEECCTTCEEEC
T ss_pred cCCeEEeCCCCCEEEe
Confidence 3899999999999986
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=1.6e-55 Score=509.06 Aligned_cols=417 Identities=18% Similarity=0.248 Sum_probs=329.2
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|++++||++ +++|++||+|+.++.+||+|||+..... .+.. ..|.
T Consensus 180 m~i~~LG~~-~evg~s~~lI~~~~~~ILID~G~~~~~~-------~~~~---------------------------~~~~ 224 (636)
T 2ycb_A 180 ARLTAMGGF-REVGRSCLYLQTPNSRVLLDCGVNVAGG-------DDKN---------------------------SYPY 224 (636)
T ss_dssp CEEEEEESS-SSSSCCEEEEECSSCEEEEEECCCCSSC-------CHHH---------------------------HSCC
T ss_pred EEEEEEecC-CCCCCCEEEEEECCeEEEEeCCCCcccc-------cchh---------------------------hccc
Confidence 799999998 8999999999999999999999983310 0000 0122
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCc
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~ 158 (678)
+. ....+..+||+|||||+ ||+||||+|.+ .++++|||||++|.++.+.++.|+.++.+..
T Consensus 225 l~----~l~~~~~~Id~VlLTH~H~DHiGglp~L~~-~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~------------ 287 (636)
T 2ycb_A 225 LN----VPEFTLDSLDAVIITHAHLDHSGFLPYLYH-YGYDGPVYCTAPTRDLMTLLQLDHIDIAHRE------------ 287 (636)
T ss_dssp TT----STTCCTTTCCEEECSSSSHHHHTTHHHHHH-TTCCSCEEECHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred cc----cccCCcccCcEEEECCCChHHhcCHHHHHh-cCCCCeEEEcchHHHHHHHHHHHHHHhhhhc------------
Confidence 10 01246789999999999 99999999987 3788999999999999999888877654310
Q ss_pred ccchhhhhhhchhhhhhhcccCCCCCCCCCCchH--HHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEe
Q 005761 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIIS 236 (678)
Q Consensus 159 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~ 236 (678)
.+.+.| ++++.++.+++.+++++++++.|+++++++++||++||++|.|+
T Consensus 288 ----------------------------~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~ 339 (636)
T 2ycb_A 288 ----------------------------DEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMAHLH 339 (636)
T ss_dssp ----------------------------TCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCEEEEEE
T ss_pred ----------------------------CCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcEEEEEE
Confidence 112345 68888888999999999999966899999999999999999999
Q ss_pred eCCe--eEEEecCCCCCcC--CCCcccccccCCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcccHHHH
Q 005761 237 GAKG--NIAYISGSNFASG--HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM 312 (678)
Q Consensus 237 ~~~~--~I~Y~sgD~~~~~--h~~~~d~~~l~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~~~~e~ 312 (678)
.++. +|+| |||+.... +..+.+. ...++|+|| +||||++.. ..|.++..
T Consensus 340 ~~~~~~~ilf-tGD~~~~~~~ll~~~~~-~~~~~D~LI-------------~EsT~~~~~--------~~h~s~~~---- 392 (636)
T 2ycb_A 340 IGDGQHNMVY-TGDFKYEQSRLLEAAAN-RFPRIETLV-------------MESTYGGHE--------DVQPSRNR---- 392 (636)
T ss_dssp ETTTTTCEEE-CCSCCSSCCSSSCCCCC-CCSCCSEEE-------------EECTTCSGG--------GCCCCHHH----
T ss_pred ECCCeEEEEE-ECCCCCCcccccCCccc-CCCCCeEEE-------------ECCCCCCCC--------CCCCCHHH----
Confidence 8888 9999 99994321 1111100 123344433 788998731 11433322
Q ss_pred HHHHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCC-ceeEEEEChhHHHHHHHHHhcHHHHhHHHHHHH
Q 005761 313 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 391 (678)
Q Consensus 313 e~l~~~~~~I~~tl~~GG~VLIP~~a~Gr~qELl~~L~~~~~~~~l-~~pIy~~s~~a~~~~~~~~~~~ewl~~~~~~~~ 391 (678)
..++|++.+.+++++||+||||+|++||+|||+.+|.++|++..+ ++|||++| ++.+++++|..+.+||+...++.+
T Consensus 393 -~~~~l~~~i~~~~~~~g~vlIp~fa~GR~qell~~l~~~~~~~~~~~~~V~~dg-~~~~~~~~~~~~~~~l~~~~~~~~ 470 (636)
T 2ycb_A 393 -AEKELVKTIYSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVPVYIDG-MIWEANAIHTARPEYLSKDLRDQI 470 (636)
T ss_dssp -HHHHHHHHHHHHHHHTCCEEEECCTTTHHHHHHHHHHHHHHTTSSCCCCEEEEH-HHHHHHHHHHHSGGGSCHHHHHHH
T ss_pred -HHHHHHHHHHHHHHcCCEEEEEECCCcHHHHHHHHHHHHHHhCCCCCCeEEEeh-HHHHHHHHHHHhHHhhCHHHHHHH
Confidence 235578889999999999999999999999999999999998777 79999985 999999999999999999987766
Q ss_pred h-CCCCCC--CceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcchhcc
Q 005761 392 F-SGDPLF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELA 468 (678)
Q Consensus 392 ~-~~~~pF--~~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~~~~t 468 (678)
+ ...+|| +++..+++ ..+.+.+. .++||||||++|||++|+++++|++|++||+|+||| +||+.++|
T Consensus 471 ~~~~~~~f~~~~~~~~~~--------~~~~~~l~-~~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~-sg~~~~Gt 540 (636)
T 2ycb_A 471 FHMGHNPFISDIFHKVNG--------MDERREIV-EGEPSIILSTSGMLTGGNSLEYFKWLCEDPDNSLVF-VGYQAEGS 540 (636)
T ss_dssp HTTCCCGGGCTTEEEECC--------HHHHHHHH-HSSSCEEEESCSSSSSHHHHHHHHHHTTCTTSEEEE-CSCCCSSS
T ss_pred HhccCCcccCCceEEeCC--------HHHHHHhc-cCCCEEEEecCCccCCChHHHHHHHHhCCCCCEEEE-ecCCCCCC
Confidence 4 467888 44444442 11111121 378999999999999999999999999999999999 89999887
Q ss_pred cC-----------------C--CCceeeEEEEee-cccCCCHhhHHHHHHhhC--CCEEEEecCCccccccccc-----C
Q 005761 469 VL-----------------P--FKPISMKVLQCS-FLSGKKLQKVQPLLKILQ--PKLVLFPEEWRTHVSFSDV-----T 521 (678)
Q Consensus 469 l~-----------------~--~~~v~~~v~~~~-fs~had~~~l~~li~~~~--P~~vilvHg~~~~~~~l~~-----~ 521 (678)
++ . ..+++|+|..++ ||+|||+++|.+|++.++ |++|++|||+...+..+++ .
T Consensus 541 ~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~~~SgHad~~eL~~~i~~~~~~Pk~vi~vHGe~~~~~~~a~~~~~~~ 620 (636)
T 2ycb_A 541 LGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKILLCHGDNYKTLDLASSIYRTY 620 (636)
T ss_dssp HHHHHHTTCCEEEEECSSSCEEEEECCSEEEECCSCCSSCCHHHHHHHHHSCSSCCSEEEEESSCHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCceeeeeccCCceeEEEeEEEEEEECCcceeCCHHHHHHHHHHhccCCCEEEEECCCHHHHHHHHHHHHHHc
Confidence 32 1 234788999998 999999999999999999 9999999999998777752 3
Q ss_pred CceEeecCCCcEEEe
Q 005761 522 SFSVSHYSENETIHI 536 (678)
Q Consensus 522 ~~~v~~p~~ge~v~i 536 (678)
|+++++|.+||++++
T Consensus 621 g~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 621 RIETKTPLNLETVRI 635 (636)
T ss_dssp CCEEECCCTTCEEEC
T ss_pred CCcEEeCCCCCEEEe
Confidence 889999999999986
No 6
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=100.00 E-value=1.2e-48 Score=454.30 Aligned_cols=345 Identities=16% Similarity=0.233 Sum_probs=255.8
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|+|++|+||+++++++||+|+.++.+||+|||+.... ..+ | + + ..+
T Consensus 1 m~~t~L~gg~~ev~~n~~LIe~~~~~ILID~G~~~~~--------~~~----~----------------~---~---l~~ 46 (717)
T 2i7x_A 1 MTYKYNCCDDGSGTTVGSVVRFDNVTLLIDPGWNPSK--------VSY----E----------------Q---C---IKY 46 (717)
T ss_dssp CCEEEEECCSSSSSCCCEEEEETTEEEEECCCCCTTT--------SCH----H----------------H---H---HHH
T ss_pred CEEEEEeecCCCCCCCEEEEEECCeEEEEeCCCCccc--------chh----h----------------h---H---HHH
Confidence 8999998777899999999999999999999998320 000 0 0 0 001
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccC----CCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCC
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEG----FSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE 154 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~g----f~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~ 154 (678)
. ..... +||+|||||+ ||+||||+|.+.++ .++|||||++|+++++.+++|.++.+..
T Consensus 47 L------~~~~~-~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~t~~l~~~~l~d~~~~~~~--------- 110 (717)
T 2i7x_A 47 W------EKVIP-EIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVSTIDSYASAGV--------- 110 (717)
T ss_dssp H------HTTGG-GCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHHHHHHHHHHHHHHTTS---------
T ss_pred H------HhcCC-CCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecchhHHHHHHHHHHHHHhhcc---------
Confidence 0 11123 8999999999 99999999997532 3789999999999999999987654210
Q ss_pred CCCcccchhhhhhhchhhhhhhcccCCCCCCCCC-CchH--HHHHHHHhcceEecCCCeEEe---CCCeEEEEEecCCCc
Q 005761 155 SSGPQWMKWEELELLPSALRKIALGEDGSELGGG-CPCI--AHVKDCISKVQTLRFGEEACY---NGILIIKAFSSGLDI 228 (678)
Q Consensus 155 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~ly--~dv~~~~~~i~~v~y~e~v~i---~g~l~it~~~sGH~l 228 (678)
...+ .++| +++..++.+++.++|++++.+ .|+++|+++++||++
T Consensus 111 ------------------------------~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~ 160 (717)
T 2i7x_A 111 ------------------------------IGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCP 160 (717)
T ss_dssp ------------------------------SSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSST
T ss_pred ------------------------------ccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCC
Confidence 0001 1356 788889999999999999999 368999999999999
Q ss_pred ccEEEEEeeCCeeEEEecCCCCCc--CCCCcccccccCCCCeEeecCCCCCCCCCCc--ccCcccCCCcchhhhhccCCC
Q 005761 229 GACNWIISGAKGNIAYISGSNFAS--GHAMDFDYRAIQGSDLILYSDLSSLDSTEDI--DQSSFSDDNNNWEELMNSLSN 304 (678)
Q Consensus 229 Gs~~~~I~~~~~~I~Y~sgD~~~~--~h~~~~d~~~l~~~d~li~~~~~~~p~~~Dv--~EsTyg~~~~~~~~~~~~~h~ 304 (678)
||++|.|+.++.+|+| |||+... .+..+.+. +... -..+..+ ..+|+ +||||+. +.|+
T Consensus 161 Gs~~~~I~~~~~~Ivy-tGD~~~~~~~~l~~~~~--L~~~----g~~l~~l-~~~D~LI~EsTy~~----------~~h~ 222 (717)
T 2i7x_A 161 GGSIWCISTYSEKLVY-AKRWNHTRDNILNAASI--LDAT----GKPLSTL-MRPSAIITTLDRFG----------SSQP 222 (717)
T ss_dssp TCEEEEEECSSCEEEE-CSSCCSSCCSSCCCCTT--BCTT----SCBCSTT-SSCSEEEECCSCCC----------CSSC
T ss_pred CcEEEEEEeCCCEEEE-ECCCCCCcccccCcccc--cccc----chhHHhc-cCCcEEEEcCCCCC----------CCCC
Confidence 9999999999999999 9998432 12111111 0000 0001112 13444 7889977 3343
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHH-H---hCCC-ceeEEEEChhHHHHHHHHHhc
Q 005761 305 YDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFM-E---CSSL-KIPIYIISSVAEELLAYTNTI 379 (678)
Q Consensus 305 ~~~~~~e~e~l~~~~~~I~~tl~~GG~VLIP~~a~Gr~qELl~~L~~~~-~---~~~l-~~pIy~~s~~a~~~~~~~~~~ 379 (678)
.+ +++.+|++.|.+++++||+||||+|++||+|||+.+|.++| + +..+ ++|||++|+++.+++++|+.+
T Consensus 223 ~~------~~~~~l~~~i~~~l~~~G~VlIp~fa~gR~qell~~l~~~~~~~~~~~~~~~~pI~l~g~~a~~~~~i~~~~ 296 (717)
T 2i7x_A 223 FK------KRSKIFKDTLKKGLSSDGSVIIPVDMSGKFLDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSM 296 (717)
T ss_dssp HH------HHHHHHHHHHHHHTSTTCEEEEEECTTTHHHHHHHHHHHHHTTC-------CCCEEEECTTTTHHHHHHHTC
T ss_pred CH------HHHHHHHHHHHHHHhCCCeEEEEeccchHHHHHHHHHHHhhhhhhccccCCCceEEEECHHHHHHHHHHHHH
Confidence 22 23457889999999999999999999999999999999998 2 2345 799999999999999999999
Q ss_pred HHHHhHHHHHHHhCCC--CCCC---ceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCC
Q 005761 380 PEWLCKQRQEKLFSGD--PLFA---HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 454 (678)
Q Consensus 380 ~ewl~~~~~~~~~~~~--~pF~---~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~ 454 (678)
.+||++..++.+...+ .||. ++++ .+ . +.+...++||||+||+ ++|+++++|++|++||+
T Consensus 297 ~e~l~~~~~~~~~~~~~~~pf~~~~~l~~-~~--------~---~~l~~~~~p~VI~aSG---~gG~~~~~L~~~a~~~~ 361 (717)
T 2i7x_A 297 LEWLSPSLLKTWENRNNTSPFEIGSRIKI-IA--------P---NELSKYPGSKICFVSE---VGALINEVIIKVGNSEK 361 (717)
T ss_dssp GGGSCHHHHHHHHSSSSCCTTCCTTTEEE-CC--------G---GGGGGCCSCEEEEEES---CHHHHHHHHHHHSSCTT
T ss_pred HHHhChHHHHHHhcccccCCccccccCcc-CC--------H---HHHhhCCCCEEEEECC---CCHHHHHHHHHHcCCCc
Confidence 9999998866554433 4764 4444 22 2 2244557799999876 89999999999999999
Q ss_pred CcEEEccCcch
Q 005761 455 SLLVLENEVDA 465 (678)
Q Consensus 455 N~Iilt~gy~~ 465 (678)
|+||| +||+.
T Consensus 362 n~VIf-~g~~~ 371 (717)
T 2i7x_A 362 TTLIL-TKPSF 371 (717)
T ss_dssp EEEEE-CSSCC
T ss_pred CEEEE-EcCCC
Confidence 99999 56543
No 7
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=100.00 E-value=2.7e-40 Score=375.17 Aligned_cols=379 Identities=12% Similarity=0.112 Sum_probs=277.2
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|++++|||. +++|++||+++.++..||+|||+.+... ....++.+....++
T Consensus 9 i~i~~lGg~-~eiG~n~~li~~~~~~iLID~G~~~~~~----------------------------~~~g~d~iip~~~~ 59 (555)
T 3zq4_A 9 TAVFALGGL-GEIGKNTYAVQFQDEIVLIDAGIKFPED----------------------------ELLGIDYVIPDYTY 59 (555)
T ss_dssp EEEEEEESB-SSSSCCEEEEEETTEEEEEEECCBCCCT----------------------------TSTTCSEEEECCHH
T ss_pred EEEEEcCCC-CccCCEEEEEEECCeEEEEeCCCCCCcc----------------------------ccccccccccCHHH
Confidence 578999998 8999999999999999999999974320 00000111111111
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCc
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~ 158 (678)
. ..+..+||+|||||+ ||+||||+|.+. |++|||+|++|.++.+..+.+.- .
T Consensus 60 l-------~~~~~~Id~I~lTH~H~DHiggl~~l~~~--~~~pIy~t~~t~~ll~~~l~~~~--------~--------- 113 (555)
T 3zq4_A 60 L-------VKNEDKIKGLFITHGHEDHIGGIPYLLRQ--VNIPVYGGKLAIGLLRNKLEEHG--------L--------- 113 (555)
T ss_dssp H-------HTTTTTEEEEEESCCCHHHHTTHHHHHTT--CCCCEEECHHHHHHHHHHHHHHS--------T---------
T ss_pred H-------hcCccCCCEEEECCCchhhhCCHHHHHHh--cCceEEECHHHHHHHHHHHHHcC--------c---------
Confidence 1 135689999999999 999999999983 68999999999998877665420 0
Q ss_pred ccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCC-CcccEEEEEee
Q 005761 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL-DIGACNWIISG 237 (678)
Q Consensus 159 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH-~lGs~~~~I~~ 237 (678)
. .+ .+++.+++++++++ |++++++++++| ++||++|.|+.
T Consensus 114 --------------------------~---~~---------~~~~~v~~g~~~~i-g~~~v~~~~~~H~~pgs~~~~i~~ 154 (555)
T 3zq4_A 114 --------------------------L---RQ---------TKLNIIGEDDIVKF-RKTAVSFFRTTHSIPDSYGIVVKT 154 (555)
T ss_dssp --------------------------T---TT---------CCEEECCTTCCEEE-TTEEEEEEEEBCSSSSEEEEEEEE
T ss_pred --------------------------c---CC---------CceEEeCCCCEEEE-CCEEEEEEeCCCCCcCcEEEEEEE
Confidence 0 00 15788999999999 689999999999 78999999999
Q ss_pred CCeeEEEecCCCCCcCCCC--ccccccc-----CCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcccHH
Q 005761 238 AKGNIAYISGSNFASGHAM--DFDYRAI-----QGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE 310 (678)
Q Consensus 238 ~~~~I~Y~sgD~~~~~h~~--~~d~~~l-----~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~~~~ 310 (678)
++.+|+| |||+.....+. +.|...+ +++|+|| +||||+.... +.. .
T Consensus 155 ~~~~il~-tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li-------------~esT~~~~~~---------~~~----s 207 (555)
T 3zq4_A 155 PPGNIVH-TGDFKFDFTPVGEPANLTKMAEIGKEGVLCLL-------------SDSTNSENPE---------FTM----S 207 (555)
T ss_dssp TTEEEEE-CCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEE-------------EECTTTTCCS---------CCC----C
T ss_pred CCcEEEE-eCCCCCCCCcCcCccCHHHHHHhcccCCcEEE-------------ecCcccCCCC---------CCC----C
Confidence 9999999 99995432211 2232222 2455554 5778877311 111 1
Q ss_pred HHHHHHHHHHHHHHHHhc-CCeEEEecCC--hHHHHHHHHHHHHHHHhCCCceeEEEEChhHHHHHHHHHhcHHHHhHHH
Q 005761 311 EMEKLAFICSCAIDSVKA-GGSVLIPINR--VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQR 387 (678)
Q Consensus 311 e~e~l~~~~~~I~~tl~~-GG~VLIP~~a--~Gr~qELl~~L~~~~~~~~l~~pIy~~s~~a~~~~~~~~~~~ewl~~~~ 387 (678)
+ .++.+.+.+++++ +|+|+||+|+ +||+||++.++.++ ..+||++++...+++++++.+ .|+.
T Consensus 208 e----~~v~~~i~~~~~~~~grvii~~fasnv~R~q~il~~a~~~------gr~v~v~grs~~~~~~~~~~~-g~l~--- 273 (555)
T 3zq4_A 208 E----RRVGESIHDIFRKVDGRIIFATFASNIHRLQQVIEAAVQN------GRKVAVFGRSMESAIEIGQTL-GYIN--- 273 (555)
T ss_dssp H----HHHHHHHHHHHHHCCSCEEEECCTTCHHHHHHHHHHHHTT------TCEEEEESHHHHHHHHHHHGG-GSCC---
T ss_pred H----HHHHHHHHHHHHhCCCEEEEEEChhHHHHHHHHHHHHHHH------CCEEEEeCHHHHHHHHHHHHc-CCcc---
Confidence 1 2355678888876 9999999999 99999999998655 679999998888888888765 2221
Q ss_pred HHHHhCCCCCCCceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCC--------cEEE
Q 005761 388 QEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNS--------LLVL 459 (678)
Q Consensus 388 ~~~~~~~~~pF~~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N--------~Iil 459 (678)
++...++.. + +.....+++.||++|++ .|..+++|.+|+++++| +|||
T Consensus 274 ----------~p~~~~v~~---------~--~~~~~~~~~~vii~tgs---qGe~~~~L~r~a~~~~~~~~~~~~d~vi~ 329 (555)
T 3zq4_A 274 ----------CPKNTFIEH---------N--EINRMPANKVTILCTGS---QGEPMAALSRIANGTHRQISINPGDTVVF 329 (555)
T ss_dssp ----------CCGGGEECG---------G--GTTTSCGGGEEEEECCT---TCCTTSHHHHHHSSCCSSCCCCTTCEEEE
T ss_pred ----------CCcccEeCH---------H--HHhhCCCCCEEEEeCCC---CchHHHHHHHHhcCCCCccccCCCCEEEE
Confidence 111112211 1 11123356788888877 68889999999999888 9999
Q ss_pred ccCcchhcccC-------CCCceeeEEEE-----eecccCCCHhhHHHHHHhhCCCEEEEecCCcccccccc----cCCc
Q 005761 460 ENEVDAELAVL-------PFKPISMKVLQ-----CSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSD----VTSF 523 (678)
Q Consensus 460 t~gy~~~~tl~-------~~~~v~~~v~~-----~~fs~had~~~l~~li~~~~P~~vilvHg~~~~~~~l~----~~~~ 523 (678)
++|+.+++.. ......++|.+ +.+|+||++++|..|++.++|+.+|.+||+...+..++ +.|+
T Consensus 330 -s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 330 -SSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGI 408 (555)
T ss_dssp -CSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHHHSCEEEEEEESBCHHHHHHHHHHHHHTTC
T ss_pred -ECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCC
Confidence 8998776431 12334567754 79999999999999999999999999999987775554 3576
Q ss_pred ---eEeecCCCcEEEeCCC
Q 005761 524 ---SVSHYSENETIHIPSL 539 (678)
Q Consensus 524 ---~v~~p~~ge~v~i~~~ 539 (678)
+++.|+||+.+++...
T Consensus 409 ~~~~~~~~~nG~~~~l~~~ 427 (555)
T 3zq4_A 409 PEENCFIMDNGEVLALKGD 427 (555)
T ss_dssp CGGGBCCCCTTCEEEEETT
T ss_pred CcccEEEccCCCEEEEeCC
Confidence 6899999999999753
No 8
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=100.00 E-value=2.5e-38 Score=360.37 Aligned_cols=382 Identities=12% Similarity=0.063 Sum_probs=263.7
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|++++|||+ +++|++||+|+.++..||+|||+.+.... ..+. ..+ .|.
T Consensus 17 ~~i~~LGg~-~eig~n~~li~~~~~~iLID~G~~~~~~~-----~~g~-----------------------~~~---~p~ 64 (562)
T 3bk2_A 17 VEIIPLGGM-GEIGKNITVFRFRDEIFVLDGGLAFPEEG-----MPGV-----------------------DLL---IPR 64 (562)
T ss_dssp EEEEEEESB-SBSSCCEEEEEETTEEEEECCCCBCCCTT-----STTC-----------------------CEE---EEC
T ss_pred EEEEEecCC-CCcCCCEEEEEECCeEEEEECCCCCCccc-----cccc-----------------------ccc---ccc
Confidence 789999998 89999999999999999999998743100 0000 000 111
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccCC----CcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCC
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGF----SAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE 154 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf----~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~ 154 (678)
+. ....+..+||+|||||+ ||+||||+|.+.. + ++|||+|++|.++.+..+.+.
T Consensus 65 ~~----~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~-~~~~~~~pIy~~~~t~~~l~~~l~~~--------------- 124 (562)
T 3bk2_A 65 VD----YLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMI-FGKESPVPIYGARLTLGLLRGKLEEF--------------- 124 (562)
T ss_dssp CH----HHHHTGGGEEEEECCCCCHHHHTTHHHHHHHH-HCSCCCSEEEEEHHHHHHHHHHHHHT---------------
T ss_pred hh----hhhcCcccCcEEEECCCChHHhCCHHHHHHhh-ccccCCceEEeCHHHHHHHHHHHHHc---------------
Confidence 10 01124678999999999 9999999998732 2 689999999998876655421
Q ss_pred CCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCC-CcccEEE
Q 005761 155 SSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL-DIGACNW 233 (678)
Q Consensus 155 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH-~lGs~~~ 233 (678)
+ . .+ + ..+++.+++++++++.++++|++++++| ++||++|
T Consensus 125 ---------------------------~--~---~~-~------~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~ 165 (562)
T 3bk2_A 125 ---------------------------G--L---RP-G------AFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGV 165 (562)
T ss_dssp ---------------------------T--C---CS-T------TSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEE
T ss_pred ---------------------------C--C---Cc-C------CceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEE
Confidence 0 0 00 0 0157889999999995339999999999 6899999
Q ss_pred EEeeCCeeEEEecCCCCCcCCC---Cccccccc-----CCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCC
Q 005761 234 IISGAKGNIAYISGSNFASGHA---MDFDYRAI-----QGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNY 305 (678)
Q Consensus 234 ~I~~~~~~I~Y~sgD~~~~~h~---~~~d~~~l-----~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~ 305 (678)
.|+.++.+|+| |||+.....+ .+.|...+ +++|+|| +||||+... .|.+
T Consensus 166 ~i~~~~~~il~-tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li-------------~EsT~~~~~---------g~~~ 222 (562)
T 3bk2_A 166 VIRTPIGTIVH-TGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLI-------------ADATNAERP---------GYTP 222 (562)
T ss_dssp EEEETTEEEEE-CCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEE-------------EECTTTTCC---------SCCC
T ss_pred EEEECCeEEEE-cCCCCCCCCCCCCCcccHHHHHHhhccCCCEEE-------------ecccCCCCC---------CCCC
Confidence 99999999999 9999532211 11222111 3566655 567886421 1211
Q ss_pred cccHHHHHHHHHHHHHHHHHHh-cCCeEEEecCC--hHHHHHHHHHHHHHHHhCCCceeEEEEChhHHHHHHHHHhcHHH
Q 005761 306 DESVEEMEKLAFICSCAIDSVK-AGGSVLIPINR--VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 382 (678)
Q Consensus 306 ~~~~~e~e~l~~~~~~I~~tl~-~GG~VLIP~~a--~Gr~qELl~~L~~~~~~~~l~~pIy~~s~~a~~~~~~~~~~~ew 382 (678)
. + ..+.+.+.++++ .+|+|++|+|+ +||+||++..+.++ ..|||+.+.-..+++++|+.. +|
T Consensus 223 ~----e----~~v~~~l~~~~~~~~grvii~~fas~~~r~q~il~~a~~~------~r~V~v~g~s~~~~~~~~~~~-g~ 287 (562)
T 3bk2_A 223 S----E----MEIAKELDRVIGRAPGRVFVTTFASHIHRIQSVIWAAEKY------GRKVAMEGRSMLKFSRIALEL-GY 287 (562)
T ss_dssp C----H----HHHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHT------TCEEEEECHHHHHHHHHHHHT-TS
T ss_pred h----H----HHHHHHHHHHHHhCCCEEEEEEccccchHHHHHHHHHHHh------CCEEEEEChHHHHHHHHHHhc-Cc
Confidence 1 1 113344556665 68999999999 99999999988654 458888544444777777643 44
Q ss_pred HhHHHHHHHhCCCCCCCceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcC--------CCC
Q 005761 383 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG--------DHN 454 (678)
Q Consensus 383 l~~~~~~~~~~~~~pF~~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~--------d~~ 454 (678)
++. +++| +. ..+.....++++||+||+++ |.....+.+|+. +|+
T Consensus 288 l~~---------~~~~-----i~-----------~~~~~~~~~~~~vi~~tg~~---ge~~~~l~ria~~~h~~~~~~~~ 339 (562)
T 3bk2_A 288 LKV---------KDRL-----YT-----------LEEVKDLPDHQVLILATGSQ---GQPMSVLHRLAFEGHAKMAIKPG 339 (562)
T ss_dssp CCC---------SSCC-----BC-----------TGGGTTSCGGGEEEEECCTT---SCSHHHHHHHHTTCCSSCCCCTT
T ss_pred ccC---------CCCc-----cC-----------HHHHhcCCCCCEEEEEcCCC---chhHHHHHhhhhcccccccCCCC
Confidence 321 2333 11 11111123456777777653 554555777764 889
Q ss_pred CcEEEccCcchhcccC-------CCCceeeEEE-----EeecccCCCHhhHHHHHHhhCCCEEEEecCCcccccccc---
Q 005761 455 SLLVLENEVDAELAVL-------PFKPISMKVL-----QCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSD--- 519 (678)
Q Consensus 455 N~Iilt~gy~~~~tl~-------~~~~v~~~v~-----~~~fs~had~~~l~~li~~~~P~~vilvHg~~~~~~~l~--- 519 (678)
|+||| +||+.+++.+ ......++|. .+.||+|||+++|.+|++.++|+++|+|||+...+..++
T Consensus 340 ~~vi~-s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~~~~~~~~~~ 418 (562)
T 3bk2_A 340 DTVIL-SSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQMNFKWLA 418 (562)
T ss_dssp CEEEE-CSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBCHHHHHHHHHHH
T ss_pred CEEEE-ECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCCHHHHHHHHHHH
Confidence 99999 8999887742 1224456664 457999999999999999999999999999998776654
Q ss_pred -cCCc---eEeecCCCcEEEeCCCC
Q 005761 520 -VTSF---SVSHYSENETIHIPSLK 540 (678)
Q Consensus 520 -~~~~---~v~~p~~ge~v~i~~~~ 540 (678)
+.|+ +++.|.+|++++++...
T Consensus 419 ~~~g~~~~~~~~~~~G~~~~l~~~~ 443 (562)
T 3bk2_A 419 ESMSRPPEKTLIGENGAVYRLTRET 443 (562)
T ss_dssp HTSSSCCSEECCCCTTEEEEECSSC
T ss_pred HHcCCCcceEEECCCCCEEEEeCCC
Confidence 3576 69999999999998643
No 9
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=100.00 E-value=4.7e-31 Score=291.51 Aligned_cols=404 Identities=10% Similarity=0.031 Sum_probs=245.1
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCC-ccccccccCC
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPL-DANDLIFAEP 79 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p 79 (678)
|++++||++ +++|++||+|+.++.+||+|||........+ |... .. ++. ....+ ++..+...
T Consensus 7 m~i~~lG~~-~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~-~~~~-~~-~~~-----------~~~~~~~~~~l~~~-- 69 (429)
T 2az4_A 7 TTVTFHSGI-LTIGGTVIEVAYKDAHIFFDFGTEFRPELDL-PDDH-IE-TLI-----------NNRLVPELKDLYDP-- 69 (429)
T ss_dssp EEEEEEECT-TSSSCCEEEEEETTEEEEECCCCCCCTTCCC-SCCC-HH-HHH-----------HTTSSCCCSSCBCG--
T ss_pred eEEEEeeCC-CccCCeEEEEEECCeEEEEecCCCCCcccCC-Ccch-hh-hcc-----------CCcccCCchhhhcc--
Confidence 789999998 7999999999999999999999985321100 0000 00 000 00000 00000000
Q ss_pred cccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCC
Q 005761 80 WYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSG 157 (678)
Q Consensus 80 ~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~ 157 (678)
....|......+..+||+|||||+ ||+||||+|.+ ++|||+|+.|.++.+.+.++.
T Consensus 70 ~~~~p~~~~~~~~~~i~~v~lTH~H~DHiggl~~l~~----~~~iy~~~~~~~~~~~~~~~~------------------ 127 (429)
T 2az4_A 70 RLGYEYHGAEDKDYQHTAVFLSHAHLDHSRMINYLDP----AVPLYTLKETKMILNSLNRKG------------------ 127 (429)
T ss_dssp GGCCCCCSSCCCCCSEEEEECSCSCHHHHTTGGGBCT----TSCEEEEHHHHHHHHHHTTTS------------------
T ss_pred cccccchhhhhccccCCEEEECCchHHHhCcHhHhcC----CCCEEECHHHHHHHHHHHHhC------------------
Confidence 000000112356789999999999 99999999976 689999999988765422100
Q ss_pred cccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCC-CcccEEEEEe
Q 005761 158 PQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL-DIGACNWIIS 236 (678)
Q Consensus 158 ~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH-~lGs~~~~I~ 236 (678)
..|. +... +......+++.+++++++++ |+++|+++++|| +.||++|.|+
T Consensus 128 ~~~~--------~~~~--------------------~~~~~~~~~~~~~~g~~~~~-g~~~v~~~~~~H~~~gs~~~~i~ 178 (429)
T 2az4_A 128 DFLI--------PSPF--------------------EEKNFTREMIGLNKNDVIKV-GEISVEIVPVDHDAYGASALLIR 178 (429)
T ss_dssp CSSC--------CCTT--------------------SCTTCCCCCEEECTTCEEEE-TTEEEEEEECCCSSTTCEEEEEE
T ss_pred cccc--------cccc--------------------ccccccceEEEeCCCCeEEE-CCEEEEEEECCCCChhhEEEEEE
Confidence 0010 0000 00000125788999999999 589999999999 7899999999
Q ss_pred eCCeeEEEecCCCCCcCCCCc-c-cc-cccCCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcccHHHHH
Q 005761 237 GAKGNIAYISGSNFASGHAMD-F-DY-RAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 313 (678)
Q Consensus 237 ~~~~~I~Y~sgD~~~~~h~~~-~-d~-~~l~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~~~~e~e 313 (678)
.++.+++| |||+.....+.. . .. +.++++|+|| +||||+.............|.. +
T Consensus 179 ~~~~~i~~-tGD~~~~~~~~~~~~~~~~~~~~~d~Li-------------~Est~~~~~~~~~~~~~~~~~s-----~-- 237 (429)
T 2az4_A 179 TPDHFITY-TGDLRLHGHNREETLAFCEKAKHTELLM-------------MEGVSISFPEREPDPAQIAVVS-----E-- 237 (429)
T ss_dssp ETTEEEEE-CCSCCSSSTTHHHHHHHHHHHTTCSEEE-------------EECCGGGSCCCCCCTTBCCCCS-----H--
T ss_pred eCCcEEEE-CCCcccCCCchHHHHHHHHhccCCCEEE-------------ECCCCcCcccccccccCCCCCC-----H--
Confidence 99999999 999843211100 0 00 1235677776 4567754110000000011221 1
Q ss_pred HHHHHHHHHHHHHhc-CCeEEEecCC---hHHHHHHHHHHHHHHHhCCCceeEEEEChhHHHHHHHHHhcHHHHhHHHHH
Q 005761 314 KLAFICSCAIDSVKA-GGSVLIPINR---VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQE 389 (678)
Q Consensus 314 ~l~~~~~~I~~tl~~-GG~VLIP~~a---~Gr~qELl~~L~~~~~~~~l~~pIy~~s~~a~~~~~~~~~~~ewl~~~~~~ 389 (678)
.++.+.+.+++++ +|+++||.+. .+|+|+++ .+. +.|||++++++..+++++.....++..
T Consensus 238 --~~~~~~i~~~~~~~~~rlil~h~~~~~~~r~~~~a-------~~~--gr~v~~~g~~~~~~~~~~~~~~~~~~~---- 302 (429)
T 2az4_A 238 --EDLVQHLVRLELENPNRQITFNGYPANVERFAKII-------EKS--PRTVVLEANMAALLLEVFGIEVRYYYA---- 302 (429)
T ss_dssp --HHHHHHHHHHHHTCSSSCEEEEECTTCHHHHHHHH-------HHC--SSEEEEEHHHHHHHHHHHCCCCEEECS----
T ss_pred --HHHHHHHHHHHHhCCCcEEEEEeccchHHHHHHHH-------HHh--CCEEEEEChhHHHHHhhccccCeeEec----
Confidence 1234456666666 4569999988 88888882 122 469999999998888876321111110
Q ss_pred HHhCCCCCCCceEEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcchhccc
Q 005761 390 KLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAV 469 (678)
Q Consensus 390 ~~~~~~~pF~~~~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~~~~tl 469 (678)
+..-.. .+.... +-+.+..+..++++|++ | .|+ +. .+ .+++++|+ .+++..++.
T Consensus 303 ----~~~~~~---~~~~~~------~~~~~~~~~~~~~~ii~----~--~~~--~~--~l--~~~~~vi~-s~~~~~g~~ 356 (429)
T 2az4_A 303 ----ESGKIP---ELNPAL------EIPYDTLLKDKTDYLWQ----V--VNQ--FD--NL--QEGSLYIH-SDAQPLGDF 356 (429)
T ss_dssp ----SSSCCT---TSCGGG------BCCHHHHHHCSSSEEEE----C--CSC--GG--GS--CTTCEEEE-ESCSSCSTT
T ss_pred ----cccccc---ccCccc------eecHHHHhhCCCcEEEE----e--cCc--HH--hh--CCCCEEEE-eCCCCCccc
Confidence 000000 000000 11122344556666665 2 444 11 22 34578888 676654432
Q ss_pred C--------CCCceeeEEEEeecccCCCHhhHHHHHHhhCCCEEEEecCCcccccccccCCceEeecCCCcEEEe
Q 005761 470 L--------PFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHI 536 (678)
Q Consensus 470 ~--------~~~~v~~~v~~~~fs~had~~~l~~li~~~~P~~vilvHg~~~~~~~l~~~~~~v~~p~~ge~v~i 536 (678)
. ....+.++|..+.+|+|||+++|..+++.++|+.+|.|||+...+.. ..+.+++.|.+|+++++
T Consensus 357 ~~~~~~~~~~~~~~~~~v~~i~~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~--~~~~~~~~~~~g~~~~l 429 (429)
T 2az4_A 357 DPQYRVFLDLLAKKDITFVRLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLE--NPYGERILPERGEQIVL 429 (429)
T ss_dssp SHHHHHHHHHHHHTTCEEEECCCCSSCCHHHHHHHHHHHCCSEEEEESCSCGGGCC--CTTSEECCCCTTCEEEC
T ss_pred chHHHHHHHHHHhCCCEEEEEeecCCCCHHHHHHHHHhhCCCEEEECCCCchhhhh--cCCCcEEEeCCCcEEeC
Confidence 1 11356788889999999999999999999999999999999775544 44678999999999875
No 10
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.93 E-value=7.5e-26 Score=243.93 Aligned_cols=285 Identities=11% Similarity=0.098 Sum_probs=186.6
Q ss_pred CCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhc
Q 005761 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (678)
Q Consensus 92 ~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l 169 (678)
..+||+|||||+ ||+||||. ++++|||||++|.++.+..+. .
T Consensus 49 ~~~IdaI~lTH~H~DHiggl~~-----~~~~pIy~s~~t~~ll~~~l~----~--------------------------- 92 (367)
T 4b87_A 49 VEGCTAYFLTHFHSDHYAGLSK-----HFTFPVYCSEITGNLLKNKLH----V--------------------------- 92 (367)
T ss_dssp CTTCCEEECCCCCHHHHTTCST-----TCCSCEEECHHHHHHHHHHSC----C---------------------------
T ss_pred ccCCcEEEECcChHHHhCCccc-----ccCCcEEECHHHHHHHHHHhc----c---------------------------
Confidence 568999999999 99999993 568999999999886542210 0
Q ss_pred hhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEee-CCeeEEEecCC
Q 005761 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISG-AKGNIAYISGS 248 (678)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~~-~~~~I~Y~sgD 248 (678)
. . ..++.+++++++.+ |+++|+++++||++|+++|.|+. ++.+|+| |||
T Consensus 93 ------------~-------~---------~~~~~l~~g~~~~i-g~~~v~~~~agH~~gs~~~~i~~~~g~~il~-tGD 142 (367)
T 4b87_A 93 ------------Q-------E---------QYIHPLPLDTECIV-NGVKVVLLDANHCPGAVMILFYLPNGTVILH-TGD 142 (367)
T ss_dssp ------------C-------G---------GGEEECCBTSCEEE-TTEEEEEEECSSSTTCEEEEEECTTSCEEEE-CCS
T ss_pred ------------c-------c---------ceEEEeCCCCEEEE-CCEEEEEEeCCCcCCcEEEEEEcCCCcEEEE-ecC
Confidence 0 0 25778999999999 68999999999999999999986 5667999 999
Q ss_pred CCCcCCCCcccccccCCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcccHHHHHHHHHHHHHHHHHHhc
Q 005761 249 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKA 328 (678)
Q Consensus 249 ~~~~~h~~~~d~~~l~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~~~~e~e~l~~~~~~I~~tl~~ 328 (678)
+.........+. ..+++|+|| +||||+++.. .|++++ +.++++++.+.+++++
T Consensus 143 ~~~~~~~~~~~l-~~~~~D~Li-------------~EsTy~~~~~--------~~ps~~-----~~~~~~~~~i~~~~~~ 195 (367)
T 4b87_A 143 FRADPSMERSLL-ADQKVHMLY-------------LDTTYCSPEY--------TFPSQQ-----EVIRFAINTAFEAVTL 195 (367)
T ss_dssp CCCCGGGGGSGG-GTSCCCEEE-------------ECCTTCSTTC--------CCCCHH-----HHHHHHHHHHHHHHHH
T ss_pred cccCcccchhhh-ccCCCCEEE-------------EecccCCCCC--------CCCCHH-----HHHHHHHHHHHHHHHh
Confidence 943221111000 013455554 6788987432 233322 2334577788888888
Q ss_pred CCeE--EEecCChHHHHHHHHHHHHHHHhCCCceeEEEEChhHHHHHHHHHhcHHHHhHHHHHHHhCCCCCCCceEEeec
Q 005761 329 GGSV--LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKE 406 (678)
Q Consensus 329 GG~V--LIP~~a~Gr~qELl~~L~~~~~~~~l~~pIy~~s~~a~~~~~~~~~~~ewl~~~~~~~~~~~~~pF~~~~~~~~ 406 (678)
+|++ ++|+|++||.|+++.++.++ +.+|++.. ...+++..++ + +.... + +.+
T Consensus 196 ~g~~~v~~~a~~igr~q~ll~ia~~~------g~ki~v~~-~~~~il~~l~----~--~~~~~-~------------~t~ 249 (367)
T 4b87_A 196 NPHALVVCGTYSIGKEKVFLAIADVL------GSKVGMSQ-EKYKTLQCLN----I--PEINS-L------------ITT 249 (367)
T ss_dssp CTTEEEEEEESSSCCHHHHHHHHHHT------TCCEECCH-HHHHHHHTTC----C--TTHHH-H------------EES
T ss_pred CCCeEEEEccchhHHHHHHHHHHHHh------CCEEEEeH-HHHHHHHhcC----C--chhhh-h------------ccc
Confidence 8865 57889999999999999765 78999863 2222222111 0 00110 1 111
Q ss_pred cccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEE-ccCcchhcc---cCCCC---ceeeEE
Q 005761 407 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-ENEVDAELA---VLPFK---PISMKV 479 (678)
Q Consensus 407 ~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iil-t~gy~~~~t---l~~~~---~v~~~v 479 (678)
+...-.|-+++...++......++.+....-.+.|-| ++||..... +..+. .-++.+
T Consensus 250 ----------------d~~~~~vh~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~ptgw~~~~~~~~~~~~~~~~~~~~~~ 313 (367)
T 4b87_A 250 ----------------DMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISI 313 (367)
T ss_dssp ----------------CGGGCSEEEEEGGGCSHHHHHHHHHSGGGCCCEEEEEEECC----------CCCCCEEETTEEE
T ss_pred ----------------CCccceEEEeecCcCCHHHHHHHHHHhhcccccEEEEcCcccccCCCCCcccccccccCCceEE
Confidence 0112234555544455445556666665555555534 788865432 22222 235788
Q ss_pred EEeecccCCCHhhHHHHHHhhCCCEEEEecCC
Q 005761 480 LQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 511 (678)
Q Consensus 480 ~~~~fs~had~~~l~~li~~~~P~~vilvHg~ 511 (678)
..+|+|.|+++.+|.++++.++|++||-+|+-
T Consensus 314 ~~vpySeHss~~EL~~fv~~l~p~~iiptv~~ 345 (367)
T 4b87_A 314 YGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNV 345 (367)
T ss_dssp EEECCCSSCCHHHHHHHHHHHCCSEEEECSSC
T ss_pred EEEeccCCCCHHHHHHHHHhcCCCeEECeecC
Confidence 88999999999999999999999999999954
No 11
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.90 E-value=3.1e-23 Score=220.83 Aligned_cols=270 Identities=12% Similarity=0.132 Sum_probs=168.9
Q ss_pred CCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhch
Q 005761 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (678)
Q Consensus 93 ~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~ 170 (678)
.+||+|||||+ ||+||||++. ++|||||+.|+++.+..+.+
T Consensus 23 ~~i~ai~lTH~H~DHiggl~~l~-----~~pVy~s~~t~~ll~~~l~~-------------------------------- 65 (336)
T 3zdk_A 23 GTARLFFLSHMHSDHTVGLSSTW-----ARPLYCSPITAHLLHRHLQV-------------------------------- 65 (336)
T ss_dssp CSSCEEECCCCCGGGSTTCSTTC-----CSCEEECHHHHHHHHHHHCC--------------------------------
T ss_pred CCCCEEEECCChHHHHCchHHHc-----CCCEEecHHHHHHHHHhhhh--------------------------------
Confidence 57999999999 9999999975 58999999999987653310
Q ss_pred hhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeC------CCeEEEEEecCCCcccEEEEEeeCCeeEEE
Q 005761 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN------GILIIKAFSSGLDIGACNWIISGAKGNIAY 244 (678)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~------g~l~it~~~sGH~lGs~~~~I~~~~~~I~Y 244 (678)
.. ..++.+++++++.+. |+++|+++++||++||+++.|+.++++|+|
T Consensus 66 ----------~~-----------------~~~~~~~~~~~~~i~~~~~~~g~~~v~~~~~~H~~gs~~~~i~~~~~~i~~ 118 (336)
T 3zdk_A 66 ----------SK-----------------QWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTILY 118 (336)
T ss_dssp ----------CT-----------------TTEEECCTTSEEEEESSSSSSCEEEEEEEECSSSTTCEEEEEEETTEEEEE
T ss_pred ----------cc-----------------cceEecCCCCeEEecCcccccCCEEEEEEECCCCcceEEEEEEeCCceEEE
Confidence 00 135677788877651 689999999999999999999999999999
Q ss_pred ecCCCCCcCCCCcccc---cccCCCCeEeecCCCCCCCCCCcccCcccCCCcchhhhhccCCCCcccHHHHHHHHHHHHH
Q 005761 245 ISGSNFASGHAMDFDY---RAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSC 321 (678)
Q Consensus 245 ~sgD~~~~~h~~~~d~---~~l~~~d~li~~~~~~~p~~~Dv~EsTyg~~~~~~~~~~~~~h~~~~~~~e~e~l~~~~~~ 321 (678)
|||+..... ..+. ...+++|+|| +||||++... .++++. +..+++.+.
T Consensus 119 -tGD~~~~~~--~~~~~~l~~~~~vD~Li-------------~DsT~~~~~~--------~~pse~-----~v~~~l~~~ 169 (336)
T 3zdk_A 119 -TGDFRYTPS--MLKEPALTLGKQIHTLY-------------LDNTNCNPAL--------VLPSRQ-----EAAHQIVQL 169 (336)
T ss_dssp -CCSCCCCGG--GGGCGGGSSCCCCSEEE-------------ECCTBCCTTC--------CCCCHH-----HHHHHHHHH
T ss_pred -eCCCCCCcc--cccchhhhccCCccEEE-------------EecCCCCCCC--------CCCCHH-----HHHHHHHHH
Confidence 999943211 1111 1134455554 6788877422 122221 122233333
Q ss_pred HHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCCceeEEEEChhHHHHHHHHHhcHHHHhHHHHHHHhCCCCCCCce
Q 005761 322 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 401 (678)
Q Consensus 322 I~~tl~~GG~VLIP~~a~Gr~qELl~~L~~~~~~~~l~~pIy~~s~~a~~~~~~~~~~~ewl~~~~~~~~~~~~~pF~~~ 401 (678)
+.++ .||+|+||+|++||.|+++.+..++ +.+|++.+.. +..++.+ ++ + +.|
T Consensus 170 i~~~--~~g~vii~~f~vgR~q~i~~~a~~~------grkV~v~gr~----~~~~~~l-g~-----------~-~~~--- 221 (336)
T 3zdk_A 170 IRKH--PQHNIKIGLYSLGKESLLEQLALEF------QTWVVLSPRR----LELVQLL-GL-----------A-DVF--- 221 (336)
T ss_dssp HHTC--TTSEEEEEECSSSCHHHHHHHHHHH------TCCEECCHHH----HHHHHHT-TC-----------C-SCE---
T ss_pred HHhC--CCCcEEEeecchHHHHHHHHHHHHc------CCEEEEEhHH----HHHHHhc-CC-----------c-ccc---
Confidence 4332 3789999999999999999988766 6899997422 2222111 10 0 111
Q ss_pred EEeeccccccccccCChhhhccCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcchhcccCCCCceeeEEEE
Q 005761 402 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQ 481 (678)
Q Consensus 402 ~~~~~~~l~~~~~i~~~~~~~~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~~~~tl~~~~~v~~~v~~ 481 (678)
+.....-. +. ..+.++++ ..-+.+|+.+.+..-|.++|....+ . ...+..
T Consensus 222 --~~~~~~~~---i~--------~~~~~~i~----------~~al~r~~~~~~~i~i~~S~~~ipg---~----~~~~~~ 271 (336)
T 3zdk_A 222 --TVEEKAGR---IH--------AVDHMEIC----------HSNMLRWNQTHPTIAILPTSRKIHS---S----HPDIHV 271 (336)
T ss_dssp --ESCGGGCS---EE--------EEEGGGCS----------HHHHHHHHHHSCEEEEEECSSCCCC---S----STTEEE
T ss_pred --CCHhHcCC---CC--------cchhheeH----------HHHHHhhhCcCCeEEEEeccccccC---C----ccCcee
Confidence 11100000 00 00001111 2344566522222223333321111 0 012467
Q ss_pred eecccCCCHhhHHHHHHhhCCCEEEEec-CCcc
Q 005761 482 CSFLSGKKLQKVQPLLKILQPKLVLFPE-EWRT 513 (678)
Q Consensus 482 ~~fs~had~~~l~~li~~~~P~~vilvH-g~~~ 513 (678)
++.|+|+++.+|..+++-++|+.++-+| |+..
T Consensus 272 vh~S~Ha~~~EL~~~~~~~~P~~~iPvh~ge~~ 304 (336)
T 3zdk_A 272 IPYSDHSSYSELRAFVAALKPCQVVPIVSRRPC 304 (336)
T ss_dssp ECCCSSCBHHHHHHHHHHHCCSCEEESCTTSCC
T ss_pred eEecCCCCHHHHHHHHHHhCCCEEEEEECCcCc
Confidence 8999999999999999999999999999 9864
No 12
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.62 E-value=7.4e-16 Score=162.86 Aligned_cols=137 Identities=17% Similarity=0.153 Sum_probs=97.8
Q ss_pred CEEEEecCCCCCC----CCceEEEEE---CCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCcccc
Q 005761 1 MKFTCLCQGGGFN----FPPCHILNV---SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDAND 73 (678)
Q Consensus 1 mkl~~Lg~~~~~~----~~sc~lL~~---~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (678)
|+|++||++++.+ +.+||+|+. ++.+||+|||......
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~~~~----------------------------------- 45 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQ----------------------------------- 45 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHHHH-----------------------------------
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHHHHH-----------------------------------
Confidence 9999999984322 479999999 9999999999873210
Q ss_pred ccccCCcccccccccCCCCCCccEEEecCC--CCCChhhhhccccC-----CCcEEEecHHHHHHHHHhHHHHHHHHHhh
Q 005761 74 LIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEG-----FSAKIYITEAAARIGQLMMEELICMNMEY 146 (678)
Q Consensus 74 ~~~~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~g-----f~~~IY~T~pT~~l~~~ll~d~~~~~~~~ 146 (678)
.. ...++..+||+|||||. ||++|||.|.+..+ ...+||+++.+.++.+.++. ...
T Consensus 46 ------l~-----~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~----~~~-- 108 (320)
T 1y44_A 46 ------ML-----HTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLA----VTK-- 108 (320)
T ss_dssp ------HT-----TSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHH----HTT--
T ss_pred ------HH-----HcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHH----hhc--
Confidence 00 01124568999999999 99999999876322 24689999999776544322 100
Q ss_pred hhhcCCCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCC
Q 005761 147 RQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL 226 (678)
Q Consensus 147 ~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH 226 (678)
.|. . .+ -+++.++.++.+++ |+++|++++++|
T Consensus 109 ------------~~~--------------------~------~~---------~~~~~~~~g~~~~~-~~~~v~~~p~~H 140 (320)
T 1y44_A 109 ------------THL--------------------T------YP---------LAIQEIEEGIVFED-DQFIVTAVSVIH 140 (320)
T ss_dssp ------------CCC--------------------S------SC---------EEEEECCSEEEEEC-SSEEEEEEECBS
T ss_pred ------------cCC--------------------C------Cc---------eEEEEcCCCceEec-CCEEEEEEEccC
Confidence 000 0 00 14566777788888 579999999999
Q ss_pred CcccEEEEEee
Q 005761 227 DIGACNWIISG 237 (678)
Q Consensus 227 ~lGs~~~~I~~ 237 (678)
..++.+|.++.
T Consensus 141 ~~~~~gy~i~~ 151 (320)
T 1y44_A 141 GVEAFGYRVQE 151 (320)
T ss_dssp SSSBEEEEEEE
T ss_pred CCCcceEEEec
Confidence 99999999973
No 13
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.60 E-value=7.5e-16 Score=161.57 Aligned_cols=137 Identities=19% Similarity=0.231 Sum_probs=98.3
Q ss_pred CEEEEecCCCCCC----CCceEEEEE----CCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccc
Q 005761 1 MKFTCLCQGGGFN----FPPCHILNV----SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDAN 72 (678)
Q Consensus 1 mkl~~Lg~~~~~~----~~sc~lL~~----~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (678)
|+|++||++++.+ +.+||+|+. ++.+||+|||......
T Consensus 2 m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~---------------------------------- 47 (306)
T 2cbn_A 2 MNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQ---------------------------------- 47 (306)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTHHHH----------------------------------
T ss_pred eEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHHHHH----------------------------------
Confidence 8999999984333 369999999 8899999999873210
Q ss_pred cccccCCcccccccccCCCCCCccEEEecCC--CCCChhhhhccccC-----CCcEEEecHHHHHHHHHhHHHHHHHHHh
Q 005761 73 DLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEG-----FSAKIYITEAAARIGQLMMEELICMNME 145 (678)
Q Consensus 73 ~~~~~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~g-----f~~~IY~T~pT~~l~~~ll~d~~~~~~~ 145 (678)
+. ...++...||+|||||. ||++|||.|.+..+ ...+||+++.+.++.+.++... .
T Consensus 48 -------l~-----~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~----~- 110 (306)
T 2cbn_A 48 -------LL-----HTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRIS----G- 110 (306)
T ss_dssp -------HH-----TSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHT----T-
T ss_pred -------HH-----HhCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhh----c-
Confidence 00 01135678999999999 99999999876321 3468999999987655443210 0
Q ss_pred hhhhcCCCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecC
Q 005761 146 YRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 225 (678)
Q Consensus 146 ~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sG 225 (678)
.|. . .+ -+++.++.++.+++ |+++|+++++-
T Consensus 111 -------------~~~--------------------~------~~---------~~~~~~~~g~~~~~-~~~~v~~~~~~ 141 (306)
T 2cbn_A 111 -------------SWT--------------------D------YP---------LEIVEIGAGEILDD-GLRKVTAYPLE 141 (306)
T ss_dssp -------------CCC--------------------S------SC---------EEEEECCSEEEEEC-SSEEEEEEECB
T ss_pred -------------cCC--------------------C------ce---------EEEEEcCCCcEeec-CCEEEEEEEcc
Confidence 000 0 00 14566777788888 58999999999
Q ss_pred CCcccEEEEEee
Q 005761 226 LDIGACNWIISG 237 (678)
Q Consensus 226 H~lGs~~~~I~~ 237 (678)
|..++.+|+++.
T Consensus 142 H~~~~~gy~i~~ 153 (306)
T 2cbn_A 142 HPLECYGYRIEE 153 (306)
T ss_dssp SSSCCEEEEEEE
T ss_pred CCCCccEEEEEe
Confidence 999999999973
No 14
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.57 E-value=3.1e-15 Score=154.03 Aligned_cols=160 Identities=19% Similarity=0.156 Sum_probs=116.0
Q ss_pred CEEEEecCCCCCC----CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccc
Q 005761 1 MKFTCLCQGGGFN----FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIF 76 (678)
Q Consensus 1 mkl~~Lg~~~~~~----~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (678)
|+|++||++++.+ +.+|++|+.++..||+|||..... . +
T Consensus 25 m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~~~---------~--------------------------l-- 67 (268)
T 1zkp_A 25 MKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVLA---------Q--------------------------L-- 67 (268)
T ss_dssp EEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTHHH---------H--------------------------H--
T ss_pred cEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHHHH---------H--------------------------H--
Confidence 8999999873322 489999999999999999987321 0 0
Q ss_pred cCCcccccccccCCCCCCccEEEecCC--CCCChhhhhcccc---------CCCcEEEecHHHHHHHHHhHHHHHHHHHh
Q 005761 77 AEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRME---------GFSAKIYITEAAARIGQLMMEELICMNME 145 (678)
Q Consensus 77 ~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~---------gf~~~IY~T~pT~~l~~~ll~d~~~~~~~ 145 (678)
.. . ++..+||+|||||. ||++|+|.+.+.. +-..+||+++.+.+..+...
T Consensus 68 --~~-------~-~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~--------- 128 (268)
T 1zkp_A 68 --QK-------Y-ITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLT--------- 128 (268)
T ss_dssp --TT-------T-CCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTC---------
T ss_pred --HH-------h-CCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcc---------
Confidence 00 1 24568999999999 9999999887631 22579999998865322100
Q ss_pred hhhhcCCCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecC
Q 005761 146 YRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 225 (678)
Q Consensus 146 ~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sG 225 (678)
|. + ..++..+..++++++ |+++|+++++.
T Consensus 129 --------------~~----------------------------~--------~~~~~~~~~g~~~~~-g~~~v~~~~~~ 157 (268)
T 1zkp_A 129 --------------HE----------------------------P--------HTKGIPYNPEETLQI-GPFSISFLKTV 157 (268)
T ss_dssp --------------BT----------------------------T--------TEEEEECCTTSCEEE-TTEEEEEEECC
T ss_pred --------------cC----------------------------C--------ccceEEecCCCeEEE-CCEEEEEEECC
Confidence 10 0 014567778888999 68999999999
Q ss_pred CCcccEEEEEeeCCeeEEEecCCCCCcCCCCcccccccCCCCeEeec
Q 005761 226 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (678)
Q Consensus 226 H~lGs~~~~I~~~~~~I~Y~sgD~~~~~h~~~~d~~~l~~~d~li~~ 272 (678)
|..|+++|.|+.++++++| |||+....... ..++++|+++.+
T Consensus 158 H~~~~~~~~i~~~~~~i~~-~GD~~~~~~~~----~~~~~~d~li~e 199 (268)
T 1zkp_A 158 HPVTCFAMRITAGNDIVVY-SADSSYIPEFI----PFTKDADLFICE 199 (268)
T ss_dssp SSSCCEEEEEEETTEEEEE-CCSCCCCTTHH----HHHTTCSEEEEE
T ss_pred CCCCceEEEEEECCeEEEE-eCCCCCCHHHH----HHHcCCCEEEEE
Confidence 9999999999999999999 99995322111 224678888764
No 15
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.56 E-value=2.4e-15 Score=154.28 Aligned_cols=158 Identities=13% Similarity=0.118 Sum_probs=113.9
Q ss_pred CEEEEecCCCCC----------------------CCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcc
Q 005761 1 MKFTCLCQGGGF----------------------NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSD 58 (678)
Q Consensus 1 mkl~~Lg~~~~~----------------------~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~ 58 (678)
|++++||+|+.. -+.+||+|+.++.+||+|||.... .
T Consensus 3 ~~~~~LGtg~~~g~P~~~c~C~~C~~ar~~~~~~r~~s~~li~~~~~~iLiD~G~~~~------------~--------- 61 (258)
T 3g1p_A 3 LTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDL------------A--------- 61 (258)
T ss_dssp EEEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGCBCBSEEEEEETTEEEEECCCCTTH------------H---------
T ss_pred eEEEEEEeCCCCCCccCCcCChhhhhhhhCccccccCceEEEEECCcEEEEECCchHH------------H---------
Confidence 789999998433 247899999999999999994310 0
Q ss_pred cccccccCCCCccccccccCCcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhH
Q 005761 59 SQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMM 136 (678)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll 136 (678)
..++..+||+|||||. ||++|++.+....+...+||+++.+..+
T Consensus 62 -----------------------------~~~~~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~----- 107 (258)
T 3g1p_A 62 -----------------------------DRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGC----- 107 (258)
T ss_dssp -----------------------------HHCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCS-----
T ss_pred -----------------------------hhcCcccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhH-----
Confidence 0123468999999999 9999999997644446899999887521
Q ss_pred HHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhc-ceEecCCCeEEeCC
Q 005761 137 EELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISK-VQTLRFGEEACYNG 215 (678)
Q Consensus 137 ~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~-i~~v~y~e~v~i~g 215 (678)
.+++ + . . . +.. ...++.++++++ |
T Consensus 108 ~~~~---~-------------------------------------~--~-~-----------~~~~~~~~~~g~~~~~-g 132 (258)
T 3g1p_A 108 DDLF---K-------------------------------------H--P-G-----------LLDFSHTVEPFVVFDL-Q 132 (258)
T ss_dssp TTTT---T-------------------------------------S--C-T-----------TEEEEEECCTTCCEEE-T
T ss_pred HHHh---c-------------------------------------C--C-C-----------ccccccccCCCCeEEE-C
Confidence 0000 0 0 0 0 012 257788999999 5
Q ss_pred CeEEEEEecCCCcccEEEEEeeCCeeEEEecCCCCCcCCCCccccccc--CCCCeEeec
Q 005761 216 ILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAI--QGSDLILYS 272 (678)
Q Consensus 216 ~l~it~~~sGH~lGs~~~~I~~~~~~I~Y~sgD~~~~~h~~~~d~~~l--~~~d~li~~ 272 (678)
+++|+++++.|..|+++|+|+.++++++| |||+.... +.-...+ +++|+++.+
T Consensus 133 ~~~v~~~~~~H~~~~~g~~i~~~~~~i~~-~GDt~~~~---~~~~~~l~~~~~Dlli~e 187 (258)
T 3g1p_A 133 GLQVTPLPLNHSKLTFGYLLETAHSRVAW-LSDTAGLP---EKTLKFLRNNQPQVMVMD 187 (258)
T ss_dssp TEEEEEEECCSSSCCEEEEEECSSCEEEE-ECSCSSCC---HHHHHHHHHTCCSEEEEE
T ss_pred CEEEEEEECCCCCCceEEEEEeCCcEEEE-ECCCCCCC---HHHHHHHHhCCCCEEEEe
Confidence 89999999999999999999999999999 99984211 1001224 578888765
No 16
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.52 E-value=2.7e-14 Score=154.11 Aligned_cols=90 Identities=21% Similarity=0.211 Sum_probs=68.5
Q ss_pred CEEEEecCCCCCC----CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccc
Q 005761 1 MKFTCLCQGGGFN----FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIF 76 (678)
Q Consensus 1 mkl~~Lg~~~~~~----~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (678)
|+|++||++++.+ +.+||+|+.++.++|+|||......
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g~~~~-------------------------------------- 42 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQ-------------------------------------- 42 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTTHHHH--------------------------------------
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChhHHHH--------------------------------------
Confidence 9999999884432 5899999999999999999773210
Q ss_pred cCCcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCC---------CcEEEecHHHHHHHHHhH
Q 005761 77 AEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGF---------SAKIYITEAAARIGQLMM 136 (678)
Q Consensus 77 ~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf---------~~~IY~T~pT~~l~~~ll 136 (678)
.. ...+++..||+|||||. ||++|||.|....++ ..+||++..+.+..+.++
T Consensus 43 ---l~-----~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l 105 (368)
T 3zwf_A 43 ---LM-----KSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTM 105 (368)
T ss_dssp ---HH-----HSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHH
T ss_pred ---HH-----HcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHH
Confidence 00 01235678999999999 999999998764322 468999999988766554
No 17
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.44 E-value=1.8e-13 Score=143.04 Aligned_cols=125 Identities=14% Similarity=0.158 Sum_probs=85.7
Q ss_pred CCCCccEEEecCC--CCCChhhhhcccc---CCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhh
Q 005761 91 NVSFIDVVLISSP--MGMLGLPFLTRME---GFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 165 (678)
Q Consensus 91 d~~~ID~IlISH~--dH~g~LP~l~~~~---gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~ 165 (678)
+...||+|||||. ||++|||.|.+.. +...+||+++.+.+..+..+... . ..|.
T Consensus 96 ~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~----------~-------~~~~---- 154 (293)
T 3md7_A 96 GVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYC----------F-------ETPV---- 154 (293)
T ss_dssp TCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGG----------T-------SCCT----
T ss_pred CCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhh----------h-------cccc----
Confidence 3578999999999 9999999886522 45789999999877543322100 0 0000
Q ss_pred hhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCC----eEEEEEecCCC-cccEEEEEeeCCe
Q 005761 166 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI----LIIKAFSSGLD-IGACNWIISGAKG 240 (678)
Q Consensus 166 ~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~----l~it~~~sGH~-lGs~~~~I~~~~~ 240 (678)
+. .+.+. -+++.++.++++++ |+ ++|+++++.|. .++++|+|+
T Consensus 155 ----------------~~---~~~~~--------~~~~~l~~g~~~~~-g~~~~~~~v~~~~~~H~~~~~~g~~i~---- 202 (293)
T 3md7_A 155 ----------------GS---SYPPI--------LSMHDIAPETPFSI-EGAGGAIRFEPFSQVHGDIESLGFRIG---- 202 (293)
T ss_dssp ----------------TC---CCCCC--------EEEEECCTTCCEEE-CCTTCCEEEEEEEEEETTEEEEEEEET----
T ss_pred ----------------cc---CCCCc--------eEEEEcCCCCcEEE-CCCCCcEEEEEEEecCCCCCEEEEEEe----
Confidence 00 00000 14677888999999 46 99999999998 799999998
Q ss_pred eEEEecCCCC-CcCCCCcccccccCCCCeEeecC
Q 005761 241 NIAYISGSNF-ASGHAMDFDYRAIQGSDLILYSD 273 (678)
Q Consensus 241 ~I~Y~sgD~~-~~~h~~~~d~~~l~~~d~li~~~ 273 (678)
+++| |||+. ..... ...++++|+|+.+.
T Consensus 203 ~~~y-~gDt~~~~~~~----~~~~~~~Dlli~e~ 231 (293)
T 3md7_A 203 SVVY-CTDVSAFPEQS----LQYIKDADVLIIGA 231 (293)
T ss_dssp TEEE-ECSCSBCCGGG----HHHHTTCSEEEEEC
T ss_pred EEEE-ECCCCCCCHHH----HHHhcCCCEEEEeC
Confidence 8999 99983 11111 12367899998764
No 18
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.40 E-value=2.6e-13 Score=143.63 Aligned_cols=177 Identities=14% Similarity=0.083 Sum_probs=117.1
Q ss_pred CEEEEecCCCCC------------------------CCCceEEEEECCEE-EEEeCCCCCccccccCCCCCccccccccc
Q 005761 1 MKFTCLCQGGGF------------------------NFPPCHILNVSGFH-VLFDCPLDLSALTVFSPLPNDFYKAICKE 55 (678)
Q Consensus 1 mkl~~Lg~~~~~------------------------~~~sc~lL~~~~~~-iLlDcG~~~~~~~~f~p~~~~~~~~~~~~ 55 (678)
||+++||+|++. -+++|++|+.++.+ ||+|||.+....+ .
T Consensus 3 M~~~~LGtg~s~G~P~~~C~C~~C~~a~~~~~~~~~R~~ss~li~~~~~~~iLiD~G~~~~~~l--------~------- 67 (321)
T 3jxp_A 3 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHWILCNASPDIRAQL--------Q------- 67 (321)
T ss_dssp EEEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCCCBCBCEEEEESSSSSEEEECCCTTHHHHH--------H-------
T ss_pred EEEEEEEeCCCCCCCcCCcCCccchhhhhCCCCCCcccceEEEEEeCCceEEEEeCCchHHHHH--------H-------
Confidence 799999988311 13689999999886 9999998743210 0
Q ss_pred CcccccccccCCCCccccccccCCcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHH
Q 005761 56 NSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQ 133 (678)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~ 133 (678)
...... | ...++...||+|||||. ||++|||+|.+ +...+||+++.|.+..+
T Consensus 68 ---------------------~~~~l~-~--~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~--~~~~~vy~~~~~~~~l~ 121 (321)
T 3jxp_A 68 ---------------------AFAPMQ-P--ARALRDTGINAIVLLDSQIDHTTGLLSLRE--GCPHQVWCTDMVHQDLT 121 (321)
T ss_dssp ---------------------TCGGGC-C--CSSSSCCSEEEEECSCCCHHHHGGGGGGGG--GCCEEEEECHHHHHHTT
T ss_pred ---------------------hccccc-c--cccCCcccCCEEEECCCChhhhhhHHHHHh--cCCCeEEECHHHHHHHH
Confidence 000000 0 01246789999999999 99999999965 45789999999976543
Q ss_pred HhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEe
Q 005761 134 LMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213 (678)
Q Consensus 134 ~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i 213 (678)
..+. ...... .. . .. -+++.+..++++++
T Consensus 122 ~~~~-~f~~~~------------------------------------~~--~---~~---------i~~~~i~~g~~~~i 150 (321)
T 3jxp_A 122 TGFP-LFNMLS------------------------------------HW--N---GG---------LQWNRIELEGSFVI 150 (321)
T ss_dssp TTSC-HHHHHT------------------------------------TT--T---TC---------EEEEECCSSSCEEC
T ss_pred hhCc-cccccc------------------------------------cc--c---Cc---------eeEEEcCCCCeEEe
Confidence 2111 000000 00 0 00 03567777889998
Q ss_pred --CCCeEEEEEecC--------CC-----cccEEEEEe--eCCeeEEEecCCCCCcCCCCcccccccCCCCeEeecC
Q 005761 214 --NGILIIKAFSSG--------LD-----IGACNWIIS--GAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 273 (678)
Q Consensus 214 --~g~l~it~~~sG--------H~-----lGs~~~~I~--~~~~~I~Y~sgD~~~~~h~~~~d~~~l~~~d~li~~~ 273 (678)
.|+++|++++.- |. ..+++|+|+ .++++|+| +||+... .+--...++++|+||.+.
T Consensus 151 ~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y-~~Dt~~~---~~~~~~~~~~~D~li~ea 223 (321)
T 3jxp_A 151 DACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFY-APGLGQV---DEKLLAMMHGADCLLVDG 223 (321)
T ss_dssp TTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEE-ESSCCCC---CHHHHHHHHHCSEEEEEC
T ss_pred ccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEE-ECCCCCC---CHHHHHHhcCCCEEEEeC
Confidence 247999999996 65 478999999 88999999 8997311 000013367899998763
No 19
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.40 E-value=1.8e-13 Score=141.25 Aligned_cols=160 Identities=18% Similarity=0.192 Sum_probs=108.2
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|+++.+..+ + ..+|+++ ++..||+|||..... .+
T Consensus 1 m~i~~~~~g-~--~~~~~~i--~~~~iLiD~G~~~~~---------------------------------------~l-- 34 (280)
T 2e7y_A 1 MNIIGFSKA-L--FSTWIYY--SPERILFDAGEGVST---------------------------------------TL-- 34 (280)
T ss_dssp CCEEEEEET-T--TEEEEEE--GGGTEEEEECTTHHH---------------------------------------HH--
T ss_pred CEEEEEecC-C--ceEEEEE--CCcEEEEECCcchHH---------------------------------------Hh--
Confidence 788888654 2 3566666 578999999987321 00
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccc----cC---CCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcC
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRM----EG---FSAKIYITEAAARIGQLMMEELICMNMEYRQFYG 151 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~----~g---f~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~ 151 (678)
..+..+||+|||||. ||++|||.|... .+ -..+||+++.+. ..+..+..+..+ +
T Consensus 35 --------~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~~~~~~~--------~ 97 (280)
T 2e7y_A 35 --------GSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR-AVEEYTEFIKRA--------N 97 (280)
T ss_dssp --------GGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH-HHHHHHHHHHHH--------C
T ss_pred --------ccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccHH-HHHHHHHHHhhc--------c
Confidence 012457899999999 999999998531 21 247999999987 544433221100 0
Q ss_pred CCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCC----CeEEEEEecCCC
Q 005761 152 AEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNG----ILIIKAFSSGLD 227 (678)
Q Consensus 152 ~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g----~l~it~~~sGH~ 227 (678)
+ . . . .+ .+++.++.++++++.+ +++|+++++||.
T Consensus 98 ~------------------~-~--------~------~~---------~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~ 135 (280)
T 2e7y_A 98 P------------------D-L--------R------FS---------FNVHPLKEGERVFLRNAGGFKRYVQPFRTKHV 135 (280)
T ss_dssp G------------------G-G--------T------TT---------EEEEEECTTCCEECCCSSCSCEEEEEEECCSC
T ss_pred c------------------C-C--------C------Cc---------eEEEEcCCCCEEEeCCcccCCEEEEEEEccCC
Confidence 0 0 0 0 00 1467788999999953 799999999999
Q ss_pred cc--cEEEEEee---------------------------------CCeeEEEecCCCCCcCCCCcccccccCCCCeEeec
Q 005761 228 IG--ACNWIISG---------------------------------AKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (678)
Q Consensus 228 lG--s~~~~I~~---------------------------------~~~~I~Y~sgD~~~~~h~~~~d~~~l~~~d~li~~ 272 (678)
.| +++|+|+. ++++|+| |||+... ....++++|+||.+
T Consensus 136 ~~~~~~g~~i~~~~~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~y-sgDt~~~------~~~~~~~~d~li~e 208 (280)
T 2e7y_A 136 SSEVSFGYHIFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTI-SGDSLAL------DPEEIRGTELLIHE 208 (280)
T ss_dssp SSSCCEEEEEEEEEEEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEE-CCSCSSC------CHHHHTTCSCEEEE
T ss_pred CCCceEEEEEEEcccccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEE-ECCCChH------HHHhhcCCCEEEEe
Confidence 99 99999963 3568999 9999533 12335678887754
No 20
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.37 E-value=9.9e-12 Score=125.61 Aligned_cols=139 Identities=12% Similarity=0.165 Sum_probs=102.8
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|+++.||. +||+|+.++.+||+|||..... +
T Consensus 30 ~~it~lg~-------s~~li~~~~~~iliDpg~~~~~------------------------------------------~ 60 (235)
T 3kl7_A 30 LTITFIKH-------GSLMLTYDNHSIQVDPVSEYAD------------------------------------------Y 60 (235)
T ss_dssp EEEEEEET-------TEEEEEETTEEEEESCCTTTCC------------------------------------------T
T ss_pred eEEEEEcc-------eEEEEEECCEEEEECCCCCccc------------------------------------------h
Confidence 67778774 5999999999999999987210 1
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCc
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~ 158 (678)
.+...+|+|||||. ||+ +++.+........+||+++.+.+..
T Consensus 61 ---------~~~~~id~VliTH~H~DH~-~~~~l~~~~~~~~~v~~~~~~~~~l-------------------------- 104 (235)
T 3kl7_A 61 ---------TTFPKADIILITHEHGDHL-DPKAIQAVEKSDTEIIANENSQKKL-------------------------- 104 (235)
T ss_dssp ---------TSSCCCSEEEECCSSTTTC-CHHHHHHHCCTTCEEEECHHHHHHH--------------------------
T ss_pred ---------hhCCCCCEEEECCCccccC-CHHHHHHhhcCCCEEEEcHHHHHHh--------------------------
Confidence 13457999999998 999 5665554334578999998875431
Q ss_pred ccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCC-eEEeCCCeEEEEEecCCCcc--------
Q 005761 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGE-EACYNGILIIKAFSSGLDIG-------- 229 (678)
Q Consensus 159 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e-~v~i~g~l~it~~~sGH~lG-------- 229 (678)
.++..++.++ ++++ |+++|+++++-|..+
T Consensus 105 -----------------------------------------~~~~~l~~g~~~~~~-g~~~i~~~p~~H~~~~~~~~~~~ 142 (235)
T 3kl7_A 105 -----------------------------------------GKGKVLKNGDTDTSI-SYMKIEAVPAYNTTPGRDKYHPR 142 (235)
T ss_dssp -----------------------------------------TCSEECCTTCEECCS-TTCEEEEEECCCCSTTGGGTSCT
T ss_pred -----------------------------------------cCcEEecCCCEEEEE-CCEEEEEEEeecCCCccccccCC
Confidence 1244567778 8888 589999999988763
Q ss_pred --cEEEEEeeCCeeEEEecCCCCCcCCCCcccccccCCCCeEeec
Q 005761 230 --ACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (678)
Q Consensus 230 --s~~~~I~~~~~~I~Y~sgD~~~~~h~~~~d~~~l~~~d~li~~ 272 (678)
+++|+|+.++.+|+| +||+.... +...+.++|+++++
T Consensus 143 ~~~~g~~i~~~g~~i~~-~GDt~~~~-----~~~~l~~~Dv~il~ 181 (235)
T 3kl7_A 143 HRDNGYILTFDGLRVYI-AGDTEDIP-----EMKDLKDIDIAFLP 181 (235)
T ss_dssp TTSEEEEEEETTEEEEE-CCSCCSCG-----GGGGCCSCSEEEEE
T ss_pred CCceEEEEEeCCeEEEE-ECCCCchh-----hHHhhcCCCEEEEC
Confidence 589999999999999 99984322 22335678888764
No 21
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.24 E-value=5.4e-11 Score=122.44 Aligned_cols=108 Identities=10% Similarity=0.023 Sum_probs=76.4
Q ss_pred CCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhh
Q 005761 90 WNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (678)
Q Consensus 90 ~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (678)
+++.+||+|++||. ||+|+++.+ ...+||+++.+.+........ ..
T Consensus 99 ~~~~~i~~VilTH~H~DH~gg~~~~-----~~~~v~~~~~~~~~~~~~~~~----~~----------------------- 146 (276)
T 2r2d_A 99 LSPDDISTVVLSHLHNDHAGCVEYF-----GKSRLIAHEDEFATAVRYFAT----GD----------------------- 146 (276)
T ss_dssp CCGGGCSEEECSCCSTTTSTTGGGC-----SSSEEEEEHHHHHHHHHHHHT----TC-----------------------
T ss_pred CCHHHCCEEEecCcccccCCChhhC-----CCCEEEECHHHHHHHhccccc----cc-----------------------
Confidence 56778999999999 999999987 358999999887653321110 00
Q ss_pred hchhhhhhhcccCCCCCCCCCCchH-HHHHHH---HhcceEec-CCCeEEeCCCeEEEEE-ecCCCcccEEEEEeeCC-e
Q 005761 168 LLPSALRKIALGEDGSELGGGCPCI-AHVKDC---ISKVQTLR-FGEEACYNGILIIKAF-SSGLDIGACNWIISGAK-G 240 (678)
Q Consensus 168 ~l~~~~~~~~~~~~~~~~~~~~~ly-~dv~~~---~~~i~~v~-y~e~v~i~g~l~it~~-~sGH~lGs~~~~I~~~~-~ 240 (678)
. . ...+ .++... -.+++.++ +++.+++.+++++.+. + ||..|++++.++.++ +
T Consensus 147 --------------~--~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p-gHt~g~~~~~~~~~~~~ 206 (276)
T 2r2d_A 147 --------------H--S---SPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT-GHASGMLGLAVRLEKQP 206 (276)
T ss_dssp --------------C--S---SSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES-SSSSSEEEEEEECSSSC
T ss_pred --------------c--c---cccchHHhhhhccccccceeccCCCceeEecCCEEEEeCCC-CCCceeEEEEEEcCCCc
Confidence 0 0 0000 122211 12456676 6889999657999999 6 999999999999877 8
Q ss_pred eEEEecCCCC
Q 005761 241 NIAYISGSNF 250 (678)
Q Consensus 241 ~I~Y~sgD~~ 250 (678)
+++| +||..
T Consensus 207 ~vl~-~GD~~ 215 (276)
T 2r2d_A 207 GFLL-VSDAC 215 (276)
T ss_dssp EEEE-EETTS
T ss_pred eEEE-Eechh
Confidence 9999 99983
No 22
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.17 E-value=2e-11 Score=121.92 Aligned_cols=152 Identities=14% Similarity=0.085 Sum_probs=98.4
Q ss_pred CEEEEecCCCCC--------CCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccc
Q 005761 1 MKFTCLCQGGGF--------NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDAN 72 (678)
Q Consensus 1 mkl~~Lg~~~~~--------~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (678)
|+++|+|.+|.- ...+||+|+.++..||+|||..... .
T Consensus 13 ~~~~~~~~~g~~~~p~~~~~~~~n~~li~~~~~~iLID~G~~~~~-----------~----------------------- 58 (221)
T 1ztc_A 13 MELKILVTGGNVFVPGRLNAHFSTVVYLEHKDRRIIIDPGNLSSM-----------D----------------------- 58 (221)
T ss_dssp EEEEEEECCBEEEETTTEECCBCCEEEEEETTEEEEECCCCGGGH-----------H-----------------------
T ss_pred eeEEEEEecceEEecCCCCCCceEEEEEEeCCeEEEEECCCCcch-----------H-----------------------
Confidence 788888876211 2468999999999999999985210 0
Q ss_pred cccccCCcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhc
Q 005761 73 DLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFY 150 (678)
Q Consensus 73 ~~~~~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~ 150 (678)
.+...+. ...+++.+||+|++||. ||+++++++. ..+||+++.. +++.. +
T Consensus 59 ~l~~~l~-------~~g~~~~~i~~ViiTH~H~DH~gg~~~~~-----~~~v~~~~~~-------~~~~~---~------ 110 (221)
T 1ztc_A 59 ELEEKFS-------ELGISPDDITDVLFTHVHLDHIFNSVLFE-----NATFYVHEVY-------KTKNY---L------ 110 (221)
T ss_dssp HHHHHHH-------HHTCCGGGCCEEECSCCCHHHHGGGGGCT-----TCEEEEEGGG-------GGSCG---G------
T ss_pred HHHHHHH-------HcCCCHHHCcEEEEcCCccccCCchhhCC-----CCEEEEeHHH-------hhhhh---h------
Confidence 0000000 12245678999999999 9999999875 4799999871 11100 0
Q ss_pred CCCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCccc
Q 005761 151 GAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGA 230 (678)
Q Consensus 151 ~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs 230 (678)
.|... . ..+|..+.....++..++.++.+.. +.+++.+.+ ||..|+
T Consensus 111 --------~~~~~--~----------------------~~~~~~~~~~~~~~~~~~~g~~l~~-~~~~v~~~p-GHt~g~ 156 (221)
T 1ztc_A 111 --------SFGTI--V----------------------GRIYSKVISSWKNVVLLKGEESLFD-EKVKVFHTP-WHAREH 156 (221)
T ss_dssp --------GGCHH--H----------------------HHHHHHHHHTCCSEEEECSCCEETT-TTEEEEECC-SSSTTC
T ss_pred --------hhccc--h----------------------hhhhhhccccccceEEeCCCCEEEC-CeEEEEEcC-CCCccc
Confidence 00000 0 0011111111134667777777642 378998887 999999
Q ss_pred EEEEEeeCC-eeEEEecCCC
Q 005761 231 CNWIISGAK-GNIAYISGSN 249 (678)
Q Consensus 231 ~~~~I~~~~-~~I~Y~sgD~ 249 (678)
+++.++.++ .+++| |||.
T Consensus 157 ~~~~~~~~~~~~vlf-tGD~ 175 (221)
T 1ztc_A 157 LSFLLDTENAGRVLI-TGDI 175 (221)
T ss_dssp EEEEEEETTTEEEEE-CGGG
T ss_pred EEEEEEcCCCCeEEE-EeCc
Confidence 999999876 79999 9998
No 23
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.13 E-value=5.1e-11 Score=123.71 Aligned_cols=150 Identities=13% Similarity=0.105 Sum_probs=101.0
Q ss_pred EEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCccc
Q 005761 3 FTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYK 82 (678)
Q Consensus 3 l~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 82 (678)
++++|.. +.+||+|+.++..||+|||..... . .+. ...+
T Consensus 47 v~~~~~~----~~n~~li~~~~~~iLID~G~~~~~-----------~-----------------------~~~---~~l~ 85 (294)
T 3m8t_A 47 IYYVGTD----GIAVYVIKTSQGLILMDTAMPQST-----------G-----------------------MIK---DNIA 85 (294)
T ss_dssp EEECCCS----SSCCEEEEETTEEEEECCCCGGGH-----------H-----------------------HHH---HHHH
T ss_pred EEEeCCC----CeEEEEEEECCceEEEECCCchhH-----------H-----------------------HHH---HHHH
Confidence 5566543 678999999999999999985210 0 000 0110
Q ss_pred ccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCccc
Q 005761 83 TVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW 160 (678)
Q Consensus 83 ~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w 160 (678)
...+++.+||+|++||. ||+||++.|.+. +..+||+++.+.+..+.... .+... ..+
T Consensus 86 ----~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~------------~~~~~---~~~ 144 (294)
T 3m8t_A 86 ----KLGFKVADIKLILNTHAHLDHTGGFAEIKKE--TGAQLVAGERDKPLLEGGYY------------PGDEK---NED 144 (294)
T ss_dssp ----HTTCCGGGEEEEECSCCCHHHHTTHHHHHHH--HCCEEEEEGGGHHHHHHTCB------------TTBTT---CGG
T ss_pred ----HcCCCHHHCcEEEECCCCccccccHHHHhhc--cCCEEEEChHHHHHHhcccc------------cCccc---ccc
Confidence 12234568999999999 999999999874 46899999999775432100 00000 000
Q ss_pred chhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe-cCCCcccEEEEEeeCC
Q 005761 161 MKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDIGACNWIISGAK 239 (678)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~-sGH~lGs~~~~I~~~~ 239 (678)
. .+.+ ....+.+..++.+.+ |+++++++. .||..|++++.++.++
T Consensus 145 ~-------------------------~~~~--------~~~~~~~~~g~~~~~-g~~~i~~~~~pgHt~g~~~~~~~~~~ 190 (294)
T 3m8t_A 145 L-------------------------AFPA--------VKVDRAVKEGDRVTL-GDTTLTAHATPGHSPGCTSWEMTVKD 190 (294)
T ss_dssp G-------------------------CCCC--------CCCSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEEEEEE
T ss_pred C-------------------------CCCC--------CCCceEeCCCCEEEe-CCEEEEEEeCCCCCccCEEEEEEccC
Confidence 0 0000 013467888999999 578888887 6899999999998655
Q ss_pred e----eEEEecCCC
Q 005761 240 G----NIAYISGSN 249 (678)
Q Consensus 240 ~----~I~Y~sgD~ 249 (678)
. +++| |||.
T Consensus 191 ~~~~~~~lf-~GD~ 203 (294)
T 3m8t_A 191 GKEDREVLF-FCSG 203 (294)
T ss_dssp TTEEEEEEE-CCCC
T ss_pred CCccceEEE-EcCc
Confidence 4 8999 9998
No 24
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.13 E-value=5.5e-11 Score=120.93 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=67.0
Q ss_pred CCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhh
Q 005761 90 WNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (678)
Q Consensus 90 ~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (678)
+++.+||+|++||. ||+||++.+. +.+||+++.+.+....- . . +..
T Consensus 96 ~~~~~I~~VilTH~H~DH~gg~~~~~-----~~~i~~~~~~~~~~~~~--------~---~-----------~~~----- 143 (254)
T 3dha_A 96 YEPDDLLYIISSHLHFDHAGGNGAFT-----NTPIIVQRTEYEAALHR--------E---E-----------YMK----- 143 (254)
T ss_dssp CCGGGCSEEECSCCSHHHHTTGGGCS-----SSCEEEEHHHHHHHHHC--------T---T-----------SCG-----
T ss_pred CCHHHCCEEEcCCChhhcCCChHHCC-----CCEEEECHHHHHHhhcc--------c---c-----------ccc-----
Confidence 46678999999999 9999999875 47999999987653210 0 0 000
Q ss_pred hchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEeeC-CeeEEEec
Q 005761 168 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGA-KGNIAYIS 246 (678)
Q Consensus 168 ~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~~~-~~~I~Y~s 246 (678)
.. . ... ..+..+. ++...+ +++++...+ ||..|++.+.++.+ +++++| |
T Consensus 144 ---~~---------~--~~~------------~~~~~~~-~~~~~~-~~i~~~~~p-GHt~g~~~~~~~~~~~~~vl~-~ 193 (254)
T 3dha_A 144 ---EC---------I--LPH------------LNYKIIE-GDYEVV-PGVQLLYTP-GHSPGHQSLFIETEQSGSVLL-T 193 (254)
T ss_dssp ---GG---------S--CTT------------SCEEEEC-SSEEEE-TTEEEEECC-SSSTTCEEEEEEETTTEEEEE-E
T ss_pred ---cc---------c--Ccc------------cceEEec-CCcccc-CCEEEEECC-CCCCCCEEEEEEeCCCCEEEE-E
Confidence 00 0 000 0222332 444445 568888766 99999999999876 679999 9
Q ss_pred CCCC
Q 005761 247 GSNF 250 (678)
Q Consensus 247 gD~~ 250 (678)
||..
T Consensus 194 GD~~ 197 (254)
T 3dha_A 194 IDAS 197 (254)
T ss_dssp ETTC
T ss_pred eccc
Confidence 9983
No 25
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.10 E-value=1.3e-09 Score=111.93 Aligned_cols=167 Identities=12% Similarity=0.099 Sum_probs=103.7
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|++|.+|. +|++|+.+|.+||+|+++.-... |.+. .+.. ..+ + ..|.
T Consensus 5 m~it~lGh-------a~~li~~~g~~iLiDp~~s~~~~--~~~~-~~~~---------------~~~------~--~~~~ 51 (264)
T 3rpc_A 5 TQYTHIRN-------ATGKLTIKNTTFLIDPFLAPKDT--YPGF-EGTF---------------NYQ------Q--RMPM 51 (264)
T ss_dssp CEEEEEET-------TEEEEEETTEEEEESCCCCCTTC--BCCC-TTBT---------------TTT------S--CBSS
T ss_pred EEEEEEeC-------cEEEEEECCEEEEeCcccCCCcC--ccCC-CCcc---------------ccc------c--cCCC
Confidence 88999985 49999999999999998874211 0000 0000 000 0 0011
Q ss_pred ccccccccCCC-CCCccEEEecCC--CCCChhhhhccccCCCcEEEec-HHHHHHHHHhHHHHHHHHHhhhhhcCCCCCC
Q 005761 81 YKTVNNLHLWN-VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYIT-EAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (678)
Q Consensus 81 ~~~~~~~~~~d-~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T-~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~ 156 (678)
...| ...-+ +..+|+|||||. ||+++++.+.. ....+||++ ..+.+..+.
T Consensus 52 ~~~~--~~~~~l~~~id~iliTH~H~DH~~~~~~~~~--~~~~~v~~~~~~~~~~l~~---------------------- 105 (264)
T 3rpc_A 52 VDLP--LSMDDLLSNVTAVVVTHTHLDHWDDTAINSI--PKSLPIFVQNTADKELITS---------------------- 105 (264)
T ss_dssp SCCS--SCHHHHHTTCCEEECSCCCGGGSCHHHHHHS--CTTSCEEESSHHHHHHHHH----------------------
T ss_pred CCCC--CCHHHccccCCEEEECCCchhhCCCHHHHhh--ccCCeEEEeCHHHHHHHHh----------------------
Confidence 0000 00001 237999999998 99999998876 346899999 665443210
Q ss_pred CcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcc-------
Q 005761 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIG------- 229 (678)
Q Consensus 157 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lG------- 229 (678)
.+. .+++.+ ++++++ |+++|+++++-|..+
T Consensus 106 ------------------------~g~----------------~~~~~~--~~~~~~-~~~~i~~~pa~H~~~~~~~~p~ 142 (264)
T 3rpc_A 106 ------------------------QGF----------------IDVRII--FESLEF-NGITLRKTGGSHGTVEMYANPV 142 (264)
T ss_dssp ------------------------TTC----------------SCEEEC--SSEEEE-TTEEEEEECCCSSCHHHHTSTT
T ss_pred ------------------------cCC----------------CeeEEe--cccEEE-CCEEEEEeccccCCcccccccc
Confidence 010 123333 688999 589999999999986
Q ss_pred -------cEEEEEeeC-CeeEEEecCCCCCcCCCCcccccccCCCCeEeec
Q 005761 230 -------ACNWIISGA-KGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (678)
Q Consensus 230 -------s~~~~I~~~-~~~I~Y~sgD~~~~~h~~~~d~~~l~~~d~li~~ 272 (678)
+++|+|+.+ +++|.| +||+....+...+ ....++|+++++
T Consensus 143 ~~~~~~~~~g~~i~~~~~~~i~~-~GDt~~~~~~~~~--~~~~~~Dv~il~ 190 (264)
T 3rpc_A 143 LAPLAGDAMGVIFEAADEPTVYL-VGDTVWTSDVEKA--LLRFDPNVIIMN 190 (264)
T ss_dssp HHHHHCCCCEEEEECTTSCCEEE-CCSCCSCHHHHHH--HHHHCCSEEEEE
T ss_pred ccccccccEEEEEEeCCccEEEE-ECCcCchHHHHHH--HHHhCCCEEEEe
Confidence 489999987 788888 9998433221110 001247888864
No 26
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.09 E-value=7.4e-10 Score=118.96 Aligned_cols=98 Identities=14% Similarity=0.106 Sum_probs=71.9
Q ss_pred CCCccEEEecCC--CCCC--hhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhh
Q 005761 92 VSFIDVVLISSP--MGML--GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (678)
Q Consensus 92 ~~~ID~IlISH~--dH~g--~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (678)
..+||+|||||. ||++ ++..+.+...-..+||++..+.+..+ ..
T Consensus 107 l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~----~~---------------------------- 154 (360)
T 2wyl_A 107 IRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWI----GW---------------------------- 154 (360)
T ss_dssp CCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHH----HH----------------------------
T ss_pred cCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHH----Hc----------------------------
Confidence 578999999999 9997 46666553222689999988765321 10
Q ss_pred hchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCC------------c-------
Q 005761 168 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD------------I------- 228 (678)
Q Consensus 168 ~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~------------l------- 228 (678)
+ . + ..+++.++.++++++ |+++|+++++-|. .
T Consensus 155 --------------g--~----~--------~~~~~~l~~g~~~~~-g~~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~ 205 (360)
T 2wyl_A 155 --------------G--V----P--------KERCIVVKPGDVVKV-KDIEIHALDAFDRTALITLPADQKAAGVLPDGM 205 (360)
T ss_dssp --------------T--C----C--------GGGEEECCTTCEEEE-TTEEEEEEECCCC------------------CC
T ss_pred --------------C--C----C--------hheEEEcCCCCEEEE-CCEEEEEEeccCccccccccccccccccccccc
Confidence 0 0 0 015778889999999 5799999999553 2
Q ss_pred --ccEEEEEeeCCeeEEEecCCCCC
Q 005761 229 --GACNWIISGAKGNIAYISGSNFA 251 (678)
Q Consensus 229 --Gs~~~~I~~~~~~I~Y~sgD~~~ 251 (678)
++++|+|+.++.+|+| +||+..
T Consensus 206 ~~~~~g~~i~~~g~~i~~-sGDt~~ 229 (360)
T 2wyl_A 206 DDRAVNYLFKTPGGSLYH-SGDSHY 229 (360)
T ss_dssp TTTBEEEEEEETTEEEEE-CTTCCC
T ss_pred CcccEEEEEEECCcEEEE-eCCCCc
Confidence 3899999999999999 999843
No 27
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.07 E-value=1.3e-10 Score=114.54 Aligned_cols=147 Identities=12% Similarity=0.099 Sum_probs=97.6
Q ss_pred CEEEEecCCCCCCCCceEEEEE--CCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccC
Q 005761 1 MKFTCLCQGGGFNFPPCHILNV--SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~--~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (678)
|+++++-.+ ..+.+||+|+. ++..||+|||.....+.
T Consensus 1 m~i~~~~~~--~~~~n~~li~~~~~~~~iLiD~G~~~~~l~--------------------------------------- 39 (210)
T 2xf4_A 1 MNYRIIPVT--AFSQNCSLIWCEQTRLAALVDPGGDAEKIK--------------------------------------- 39 (210)
T ss_dssp CEEEEEEET--TTTEEEEEEECTTTCEEEEECCCSCHHHHH---------------------------------------
T ss_pred CeEEEEeeC--CcccEEEEEEecCCCcEEEEcCCCCHHHHH---------------------------------------
Confidence 788887653 45789999984 67899999996522110
Q ss_pred CcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCC
Q 005761 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (678)
Q Consensus 79 p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~ 156 (678)
...+ ... ..||+|++||. ||++|++.+.+.. ..+||+++.+.+.....+.... . .++-
T Consensus 40 ~~l~------~~g-~~i~~ii~TH~H~DH~gg~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~---~----~~~~---- 99 (210)
T 2xf4_A 40 QEVD------ASG-VTLMQILLTHGHLDHVGAASELAQHY--GVPVIGPEKEDEFWLQGLPAQS---R----MFGL---- 99 (210)
T ss_dssp HHHH------HHT-CEEEEEECSCSCHHHHTTHHHHHHHH--TCCEECCCGGGHHHHHTHHHHH---H----HTTC----
T ss_pred HHHH------HcC-CceeEEEECCCChhhhcCHHHHHHHc--CCcEEEecchHHHHhccchhhh---h----hcCC----
Confidence 0110 001 14899999999 9999999998743 5799999998765433222111 0 0000
Q ss_pred CcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe-cCCCcccEEEEE
Q 005761 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDIGACNWII 235 (678)
Q Consensus 157 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~-sGH~lGs~~~~I 235 (678)
+ . ..+ ....+.++.++++.+ |+.+++++. .||..|++.+.+
T Consensus 100 -------------~-----------~-----~~~--------~~~~~~~~~g~~~~~-g~~~i~~~~~pgHt~g~~~~~~ 141 (210)
T 2xf4_A 100 -------------D-----------E-----CQP--------LTPDRWLNDGDRVSV-GNVTLQVLHCPGHTPGHVVFFD 141 (210)
T ss_dssp -------------C-----------C-----CCC--------CCCSBCCCTTCEEEE-TTEEEEEEECCSSSTTCEEEEE
T ss_pred -------------c-----------c-----cCC--------CCCceEECCCCEEEE-CCeEEEEEECCCCCCCcEEEEe
Confidence 0 0 000 012345677889999 578888875 489999999987
Q ss_pred eeCCeeEEEecCCC
Q 005761 236 SGAKGNIAYISGSN 249 (678)
Q Consensus 236 ~~~~~~I~Y~sgD~ 249 (678)
+ +.+++| |||.
T Consensus 142 ~--~~~~lf-~GD~ 152 (210)
T 2xf4_A 142 E--QSQLLI-SGDV 152 (210)
T ss_dssp T--TTTEEE-EETS
T ss_pred C--CCCEEE-ECCE
Confidence 5 678999 9998
No 28
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.07 E-value=1.6e-10 Score=119.52 Aligned_cols=157 Identities=12% Similarity=0.035 Sum_probs=94.7
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
+.+||+|+.++..||+|||....... ......+. . . ....+. +.. ....+++.
T Consensus 47 ~~n~~lI~~~~~~iLID~G~~~~~~~------~~~~~~~~---~-------~----~~~~l~---~~l----~~~g~~~~ 99 (280)
T 3esh_A 47 PTHPILIQTAQYNLIIDAGIGNGKLS------EKQLRNFG---V-------D----EESHII---ADL----ANYNLTPK 99 (280)
T ss_dssp ECCCEEEECSSCEEESCCTTCSSCSC------HHHHHHTT---C-------S----SCCCHH---HHH----HTTTCCTT
T ss_pred eEEEEEEEECCEEEEEECCCCCcccc------cccccccC---C-------c----ccchHH---HHH----HHcCCCHH
Confidence 45899999999999999998843100 00000000 0 0 000011 011 01335677
Q ss_pred CccEEEecCC--CCCChhhhhccccCC-CcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCC-Ccccchhhhhhhc
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS-GPQWMKWEELELL 169 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~gf-~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~-~~~w~~~~~~~~l 169 (678)
+||+||+||. ||+||++++.+...| +.+||+++.+.++...- .... ...|.
T Consensus 100 ~Id~IllTH~H~DHigg~~~l~~~~~fp~a~i~~~~~~~~~~~~~-----------------~~~~~~~~~~-------- 154 (280)
T 3esh_A 100 DIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAP-----------------NIRSKSTYWD-------- 154 (280)
T ss_dssp SCCEEECSCCCHHHHGGGSCTTSCCSSTTCEEEEEHHHHHHHHSC-----------------CTTGGGTSCG--------
T ss_pred HCCEEEeCCCcccccCcccccccccCCCCCEEEECHHHHHHhhCc-----------------ccccccchhh--------
Confidence 9999999999 999999999874456 79999999886642210 0000 00000
Q ss_pred hhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEeeCCeeEEEecCCC
Q 005761 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249 (678)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~~~~~~I~Y~sgD~ 249 (678)
..|.+. ..+++.+ .+..++.+++++.. ..||..|++++.++.++++++| |||.
T Consensus 155 ----------------~~~~~~-------~~~~~~~--~~~~~l~~gi~~~~-~pGHt~g~~~~~i~~~~~~vlf-tGD~ 207 (280)
T 3esh_A 155 ----------------KNKGDY-------SNKLILF--EKHFEPVPGIKMQH-SGGHSFGHTIITIESQGDKAVH-MGDI 207 (280)
T ss_dssp ----------------GGCCGG-------GGGEEEE--SSEECSSTTEEEEE-CCSSSTTCEEEEEEETTEEEEE-CGGG
T ss_pred ----------------hhhhhh-------hheEEEe--CCCCeEcCCEEEEE-cCCCCcccEEEEEEECCcEEEE-EEcc
Confidence 001110 1234443 34455655677744 4799999999999999999999 9998
No 29
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.07 E-value=3e-10 Score=116.23 Aligned_cols=152 Identities=13% Similarity=0.063 Sum_probs=99.2
Q ss_pred EEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCccc
Q 005761 3 FTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYK 82 (678)
Q Consensus 3 l~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 82 (678)
++++|.. +.+||+|+.++..||+|||..... ..+.. ..+
T Consensus 17 v~~i~~~----~~n~~li~~~~~~iLID~G~~~~~----------------------------------~~l~~---~l~ 55 (263)
T 1k07_A 17 LYYVGTD----DLASYLIVTPRGNILINSDLEANV----------------------------------PMIKA---SIK 55 (263)
T ss_dssp EEECCBS----SBCCEEEEETTEEEEECCCCGGGH----------------------------------HHHHH---HHH
T ss_pred EEEECCC----CeEEEEEEeCCceEEEECCCcccH----------------------------------HHHHH---HHH
Confidence 5566543 578999999999999999986210 00000 000
Q ss_pred ccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCccc
Q 005761 83 TVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW 160 (678)
Q Consensus 83 ~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w 160 (678)
...+++.+||+|++||. ||+||++.+.+. +..+||+++.+.+..+.... . . ..|
T Consensus 56 ----~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~----~------------~--~~~ 111 (263)
T 1k07_A 56 ----KLGFKFSDTKILLISHAHFDHAAGSELIKQQ--TKAKYMVMDEDVSVILSGGK----S------------D--FHY 111 (263)
T ss_dssp ----HTTCCGGGEEEEECSSSSHHHHTTHHHHHHH--HCCEEEEEHHHHHHHHTTTT----T------------C--TTT
T ss_pred ----HcCCCHHHCcEEEeCCCCccccccHHHHHHh--cCCEEEEcHHHHHHHhcccc----c------------c--ccc
Confidence 12234568999999999 999999999874 46899999998775332100 0 0 000
Q ss_pred chhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe-cCCCcccEEEEEeeC-
Q 005761 161 MKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDIGACNWIISGA- 238 (678)
Q Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~-sGH~lGs~~~~I~~~- 238 (678)
. ..... .+.+ ......+..++.+.+ |+++++++. .||..|++++.++.+
T Consensus 112 ~---------~~~~~-----------~~~~--------~~~~~~~~~g~~~~~-g~~~i~~i~~pGHt~g~~~~~~~~~~ 162 (263)
T 1k07_A 112 A---------NDSST-----------YFTQ--------STVDKVLHDGERVEL-GGTVLTAHLTPGHTRGCTTWTMKLKD 162 (263)
T ss_dssp T---------TCGGG-----------CCCC--------CCCSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEEEEEE
T ss_pred C---------ccccc-----------cCCC--------CCcceEeCCCCEEEE-CCeEEEEEECCCCCCCcEEEEEeccc
Confidence 0 00000 0000 013567888999999 577888765 489999999999864
Q ss_pred -C--eeEEEecCCC
Q 005761 239 -K--GNIAYISGSN 249 (678)
Q Consensus 239 -~--~~I~Y~sgD~ 249 (678)
+ .+++| +||.
T Consensus 163 ~~~~~~~lf-~GD~ 175 (263)
T 1k07_A 163 HGKQYQAVI-IGSI 175 (263)
T ss_dssp TTEEEEEEE-ECCC
T ss_pred CCceeEEEE-ECCc
Confidence 4 48999 9997
No 30
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.04 E-value=1.8e-09 Score=116.70 Aligned_cols=97 Identities=21% Similarity=0.186 Sum_probs=72.4
Q ss_pred CCCccEEEecCC--CCCC--hhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhh
Q 005761 92 VSFIDVVLISSP--MGML--GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (678)
Q Consensus 92 ~~~ID~IlISH~--dH~g--~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (678)
..+||+|||||. ||++ ++..+.+...-..+||++..+.+..+ ..
T Consensus 131 ~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~----~~---------------------------- 178 (379)
T 3bv6_A 131 IKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWL----GW---------------------------- 178 (379)
T ss_dssp CCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHH----HH----------------------------
T ss_pred CCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHH----Hc----------------------------
Confidence 578999999999 9997 56666553222689999988765321 10
Q ss_pred hchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCC-------------c------
Q 005761 168 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD-------------I------ 228 (678)
Q Consensus 168 ~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~-------------l------ 228 (678)
+ . + ..+++.++.++++++ |+++|+++++.|. .
T Consensus 179 --------------g--~----~--------~~~~~~l~~g~~~~~-g~~~v~~~~~~H~~~~~~~p~~h~~~~G~~~~~ 229 (379)
T 3bv6_A 179 --------------G--V----P--------QERCIVAKVGDVLEI-GDVKIRVLDSFDRTALVTLPKGVSSYDKAILDG 229 (379)
T ss_dssp --------------T--C----C--------GGGEEECCTTCEEEE-TTEEEEEEECCCHHHHTCCCTTSCSSCGGGGGC
T ss_pred --------------C--C----C--------hhhEEEeCCCCEEEE-CCEEEEEEecccccccccccccccccccccccc
Confidence 0 0 0 015778899999999 5799999999763 2
Q ss_pred ---ccEEEEEeeCCeeEEEecCCCC
Q 005761 229 ---GACNWIISGAKGNIAYISGSNF 250 (678)
Q Consensus 229 ---Gs~~~~I~~~~~~I~Y~sgD~~ 250 (678)
++++|+|+.++.+|+| +||+.
T Consensus 230 ~~~~~~g~~i~~~g~~i~~-sGDt~ 253 (379)
T 3bv6_A 230 MDERAVNYLIETSGGSVYH-SGDSH 253 (379)
T ss_dssp HHHHBEEEEEEETTEEEEE-CTTCC
T ss_pred cCCceEEEEEEeCCeEEEE-eCCCC
Confidence 3899999999999999 99984
No 31
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.01 E-value=2.2e-09 Score=109.32 Aligned_cols=152 Identities=13% Similarity=0.102 Sum_probs=96.9
Q ss_pred EEEEecCC--CCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCC
Q 005761 2 KFTCLCQG--GGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEP 79 (678)
Q Consensus 2 kl~~Lg~~--~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 79 (678)
.++++..+ +.....+||+|+-++..||+|||..... +
T Consensus 5 ~i~~i~~~~~g~~~~~~~~li~~~~~~iLiD~G~~~~~-----------------------------------------~ 43 (261)
T 3adr_A 5 GLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSI-----------------------------------------A 43 (261)
T ss_dssp EEEEEECSCTTCGGGSEEEEEECSSCEEEECCCCTTCC-----------------------------------------C
T ss_pred CeEEEeccCCCCCCceEEEEEEcCCcEEEEeCCCCCCh-----------------------------------------h
Confidence 56666543 1223567999986688999999987320 0
Q ss_pred cccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHH------hHHHHHHHHHhhhhhcC
Q 005761 80 WYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQL------MMEELICMNMEYRQFYG 151 (678)
Q Consensus 80 ~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~------ll~d~~~~~~~~~~~~~ 151 (678)
. . .+ ..+||+|++||. ||+||++++.+. |..+||+++.+.+..+. +++...+.
T Consensus 44 ~------l-~~-~~~i~~vi~TH~H~DH~gg~~~l~~~--~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~--------- 104 (261)
T 3adr_A 44 D------F-SF-LDKLDYIVLTHLHIDHIGLLPELLQV--YKAKVLVKSGFKKYLTSEDGLKKLNESAEKV--------- 104 (261)
T ss_dssp C------C-TT-CSCCCEEECSCCSGGGTTTHHHHHHH--SCCEEEEETTCTHHHHSHHHHHHHHHHHHHH---------
T ss_pred h------c-CC-CCCCcEEEECCCCccccCCHHHHHHH--hCCeEEECHHHHHHhcCchhHHHHHHHHHHH---------
Confidence 1 0 12 568999999999 999999999874 37899999988665431 11111000
Q ss_pred CCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe-cCCCccc
Q 005761 152 AEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDIGA 230 (678)
Q Consensus 152 ~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~-sGH~lGs 230 (678)
|.. +..... .. .... + ..++..++.++.+.+ |++++++++ .||..|+
T Consensus 105 --------~~~------~~~~~~-------~~-~~~~-~--------~~~~~~~~~g~~~~~-g~~~i~~~~~pGHt~~~ 152 (261)
T 3adr_A 105 --------LGD------LYYVYG-------GL-EKKL-D--------QDKVIEVEGNEEFDL-GGYRMRLIYTPGHARHH 152 (261)
T ss_dssp --------HTH------HHHHHC-------CC-CSCC-C--------GGGEEEECSCCEEEC-SSSEEEEEECTTSCTTC
T ss_pred --------HHH------HHHHhc-------cc-ccCC-C--------ccceEecCCCCEEEE-CCEEEEEEECCCCCCcc
Confidence 000 000000 00 0000 0 024667888999999 578888886 4799999
Q ss_pred EEEEEeeCCeeEEEecCCCC
Q 005761 231 CNWIISGAKGNIAYISGSNF 250 (678)
Q Consensus 231 ~~~~I~~~~~~I~Y~sgD~~ 250 (678)
.++.+ .+++| |||..
T Consensus 153 ~~~~~----~~~lf-~GD~~ 167 (261)
T 3adr_A 153 MSVLV----DDFLF-TGDSA 167 (261)
T ss_dssp EEEEE----TTEEE-EETSS
T ss_pred EEEEE----CCEEE-EcCcc
Confidence 99965 37999 99983
No 32
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.01 E-value=7.4e-10 Score=109.11 Aligned_cols=143 Identities=13% Similarity=0.099 Sum_probs=94.7
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|+++++..+ ..+.+||+|+.++..+|+|||.....+. ..
T Consensus 1 M~i~~~~~g--~~~~n~~li~~~~~~iliD~G~~~~~l~---------------------------------------~~ 39 (207)
T 2zwr_A 1 MRVFPVTLG--PLQENAYLVETGEGPVLIDPGDEPEKLL---------------------------------------AL 39 (207)
T ss_dssp CEEEEEEET--TTTEEEEEEEETTEEEEECCCSCHHHHH---------------------------------------HH
T ss_pred CeEEEEecC--CcccEEEEEEeCCcEEEEeCCCCHHHHH---------------------------------------HH
Confidence 899999764 4588999999999999999997532110 01
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCc
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~ 158 (678)
.+ ... ..||+|++||. ||++|++.+.+. |..+||+++.+.+..+...... . .++.
T Consensus 40 l~------~~g-~~i~~vilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~----~----~~g~------ 96 (207)
T 2zwr_A 40 FQ------TTG-LIPLAILLTHAHFDHVGAVAPLVEA--LDLPVYLHPLDLPLYEGADLAA----R----AWGL------ 96 (207)
T ss_dssp HH------HHT-CCCSCEECSCCCGGGTTTHHHHHHH--HCCCEEECGGGHHHHHTHHHHH----H----HTTC------
T ss_pred HH------HcC-CcccEEEECCCChHHHccHHHHHHH--hCCcEEECHHHHHHHhCchhhh----h----hcCC------
Confidence 00 001 24899999999 999999999874 3689999999987644322111 0 0000
Q ss_pred ccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEeeC
Q 005761 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGA 238 (678)
Q Consensus 159 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~~~ 238 (678)
....+ + ...+.++.++.+. .+++... .||..|++.+.++
T Consensus 97 -------------------------~~~~~-~---------~~~~~~~~g~~i~---~~~~~~~-pGHt~g~~~~~~~-- 135 (207)
T 2zwr_A 97 -------------------------AIPKP-P---------LPVRPLEEGMRLF---GFQVLHL-PGHSPGHVAFYDP-- 135 (207)
T ss_dssp -------------------------CCCCC-C---------SCCEECCTTCEET---TEEEEEC-CSSSTTCEEEEET--
T ss_pred -------------------------CCCcC-C---------CCceEeCCCCEEE---EEEEEeC-CCCCCCcEEEEEC--
Confidence 00000 0 0233455566544 5676654 4899999999985
Q ss_pred CeeEEEecCCC
Q 005761 239 KGNIAYISGSN 249 (678)
Q Consensus 239 ~~~I~Y~sgD~ 249 (678)
+.+++| |||.
T Consensus 136 ~~~~lf-~GD~ 145 (207)
T 2zwr_A 136 EGAQVF-SGDL 145 (207)
T ss_dssp TTTEEE-EETS
T ss_pred CCCEEE-Eecc
Confidence 678999 9998
No 33
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.00 E-value=5e-10 Score=115.11 Aligned_cols=181 Identities=15% Similarity=0.015 Sum_probs=98.1
Q ss_pred CEEEEecCCCC-----------------CCCCceEEEEECCEEEEEeCCCCCccc---cccCCCCCcccccccccCcccc
Q 005761 1 MKFTCLCQGGG-----------------FNFPPCHILNVSGFHVLFDCPLDLSAL---TVFSPLPNDFYKAICKENSDSQ 60 (678)
Q Consensus 1 mkl~~Lg~~~~-----------------~~~~sc~lL~~~~~~iLlDcG~~~~~~---~~f~p~~~~~~~~~~~~~~~~~ 60 (678)
|++++|+.|.- ..+.+||+|+.++..||+|||...... ..|.+ + . ++
T Consensus 4 ~~i~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~-~-~----~~------- 70 (274)
T 3aj3_A 4 TKVYLLDGGSLVLDGYHVFWNRGPGGEVRFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEK-P-I----QE------- 70 (274)
T ss_dssp CEEEEEEEEEEEEEHHHHTTTTCCCSEEEEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGC-C-B----CC-------
T ss_pred cEEEEEcCceEEechHheecCCCCCcEEEeeEEEEEEEeCCccEEEECCCCcccccCccccCC-c-c----cC-------
Confidence 58888877510 123589999999999999999984310 00000 0 0 00
Q ss_pred cccccCCCCccccccccCCcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHH
Q 005761 61 NRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEE 138 (678)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d 138 (678)
+...+...+ ....+++.+||+|++||. ||+|+++++. +.+||+++.+.+........
T Consensus 71 ---------~~~~l~~~l-------~~~g~~~~~i~~VilTH~H~DH~gg~~~~~-----~a~v~~~~~~~~~~~~~~~~ 129 (274)
T 3aj3_A 71 ---------KHQTIPGAL-------GLLGLEPRDIDVVVNSHFHFDHCGGNKYFP-----HAKKICHRSEVPQACNPQPF 129 (274)
T ss_dssp ---------GGGSHHHHH-------HHTTCCGGGCCEEECSCCSGGGTTTGGGCT-----TSEEEEETTHHHHHHSCCGG
T ss_pred ---------ccccHHHHH-------HHcCCCHHHCCEEEecCcCcccCCchhhCC-----CCEEEECHHHHHHHhCcCCc
Confidence 000010000 012345678999999999 9999999872 57999999887643211000
Q ss_pred HHHHHHhhhhhcCCCCCCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCC-e
Q 005761 139 LICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI-L 217 (678)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~-l 217 (678)
. ...+.+ ..|.. .++...... .. . ...+ .. .-.++..++ +.+++ |+ +
T Consensus 130 ----~---~~~~~~-----~~~~~-----~~~~~~~~~-~~--~--~~~~-~~------~~~~~~~~~--~~~~l-~g~~ 177 (274)
T 3aj3_A 130 ----E---HLGYSD-----LSFSA-----EAAEARGAT-AQ--L--LEGT-TR------ANSTFEGID--GDVDL-ARGV 177 (274)
T ss_dssp ----G---TTTTCC-----CTTCH-----HHHHHHTCG-GG--C--CTTC-CS------TTSCEEEEC--SSEEE-ETTE
T ss_pred ----c---ccccCh-----hhhcc-----ccccccccc-cc--c--cccc-cc------CCCCceEcC--Ccccc-CCEE
Confidence 0 000000 00100 000000000 00 0 0000 00 001344443 45778 55 8
Q ss_pred EEEEEecCCCcccEEEEEeeC-CeeEEEecCCC
Q 005761 218 IIKAFSSGLDIGACNWIISGA-KGNIAYISGSN 249 (678)
Q Consensus 218 ~it~~~sGH~lGs~~~~I~~~-~~~I~Y~sgD~ 249 (678)
++.+.+ ||..|++++.++.+ +++++| |||.
T Consensus 178 ~v~~~p-GHt~g~~~~~~~~~~~~~~lf-~GD~ 208 (274)
T 3aj3_A 178 KLISTP-GHSIGHYSLLVEFPRRKPILF-TIDA 208 (274)
T ss_dssp EEEECT-TSSTTCEEEEECCSSSCCEEE-EETT
T ss_pred EEEECC-CCCceeeEEEEECCCCCEEEE-Eech
Confidence 887775 89999999999876 679999 9997
No 34
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=98.99 E-value=4e-10 Score=111.78 Aligned_cols=128 Identities=16% Similarity=0.069 Sum_probs=91.9
Q ss_pred CCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCC
Q 005761 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (678)
Q Consensus 13 ~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~ 92 (678)
.+.+||+|+.++..||+|||...... ..+ ..+.+ ....
T Consensus 29 ~~~n~~li~~~~~~iLiD~G~~~~~~---------------------------------~~~---~~~l~------~~~~ 66 (219)
T 3l6n_A 29 YSANSMYLVTKKGVVLFDVPWEKVQY---------------------------------QSL---MDTIK------KRHN 66 (219)
T ss_dssp EEEEEEEEEETTEEEEESCCSSGGGH---------------------------------HHH---HHHHH------HHHS
T ss_pred ccceEEEEEeCCEEEEEeCCCChHHH---------------------------------HHH---HHHHH------HhcC
Confidence 35799999999999999999763210 000 00110 0012
Q ss_pred CCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhch
Q 005761 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (678)
Q Consensus 93 ~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~ 170 (678)
.+||+|++||. ||+||++++.+ +..+||+++.+.+..+..
T Consensus 67 ~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~~~----------------------------------- 108 (219)
T 3l6n_A 67 LPVVAVFATHSHDDRAGDLSFFNN---KGIKTYATAKTNEFLKKD----------------------------------- 108 (219)
T ss_dssp CCEEEEECSSSSTTTTCCTHHHHH---TTCEEEECHHHHHHHHHT-----------------------------------
T ss_pred CceeEEEecCCCcccccCHHHHHh---CCCEEEEcHHHHHHHHhc-----------------------------------
Confidence 57999999999 99999999986 478999999886542210
Q ss_pred hhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe--cCCCcccEEEEEeeCCeeEEEecCC
Q 005761 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS--SGLDIGACNWIISGAKGNIAYISGS 248 (678)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~--sGH~lGs~~~~I~~~~~~I~Y~sgD 248 (678)
+. + .....++.++++.+ |+++++++. .||..|++++.+. ..+++| |||
T Consensus 109 -----------~~------~---------~~~~~~~~g~~~~~-g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf-~GD 158 (219)
T 3l6n_A 109 -----------GK------A---------TSTEIIKTGKPYRI-GGEEFVVDFLGEGHTADNVVVWFP--KYNVLD-GGC 158 (219)
T ss_dssp -----------TC------C---------CCSEECCTTSEEEE-TTEEEEEECCCCSSSSSCCEEEET--TTTEEE-EET
T ss_pred -----------CC------C---------CCcEecCCCCEEEE-CCEEEEEEeCCCCCCCCCEEEEEC--CCCEEE-ECC
Confidence 00 0 13456778889999 578999885 7999999999885 567999 999
Q ss_pred CC
Q 005761 249 NF 250 (678)
Q Consensus 249 ~~ 250 (678)
..
T Consensus 159 ~~ 160 (219)
T 3l6n_A 159 LV 160 (219)
T ss_dssp TS
T ss_pred ee
Confidence 83
No 35
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=98.87 E-value=3.8e-09 Score=112.12 Aligned_cols=151 Identities=13% Similarity=0.083 Sum_probs=91.3
Q ss_pred ceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCCCc
Q 005761 16 PCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFI 95 (678)
Q Consensus 16 sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~I 95 (678)
+||+|+.++..||+|||.... |.+... .+...+. ...+++.+|
T Consensus 98 n~~LI~~~~~~iLIDtG~~~~----~~~~~~--------------------------~l~~~L~-------~~Gi~~~~I 140 (331)
T 1p9e_A 98 TGYLVNTGSKLVLVDTGAAGL----FGPTLG--------------------------RLAANLK-------AAGYQPEQV 140 (331)
T ss_dssp EEEEEECSSCEEEECCCCTTS----SCTTCC--------------------------CHHHHHH-------HTTCCGGGC
T ss_pred EEEEEEECCEEEEEECCCCCc----CCcchh--------------------------HHHHHHH-------HcCCCHHHC
Confidence 499999999999999998732 110000 0100110 123567789
Q ss_pred cEEEecCC--CCCChhhhhccccCC-CcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchhh
Q 005761 96 DVVLISSP--MGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSA 172 (678)
Q Consensus 96 D~IlISH~--dH~g~LP~l~~~~gf-~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~ 172 (678)
|+|++||. ||+||++.+.. ..| +.+||+++.+.+.... .. .. . + .|.. |
T Consensus 141 d~VilTH~H~DHiggl~~~~~-~~fp~a~v~~~~~~~~~~~~---~~-~~-~---~--~~~~-----~------------ 192 (331)
T 1p9e_A 141 DEIYITHMHPDHVGGLMVGEQ-LAFPNAVVRADQKEADFWLS---QT-NL-D---K--APDD-----E------------ 192 (331)
T ss_dssp CEEECSCCCHHHHGGGEETTE-ESSTTCEEECBHHHHHHHSC---HH-HH-T---T--CSST-----T------------
T ss_pred CEEEeCCcccccCCccccccc-ccCCCCEEEECHHHHHHHhC---ch-hh-c---c--Cchh-----h------------
Confidence 99999999 99999985432 234 6899999998764211 00 00 0 0 0000 0
Q ss_pred hhhhcccCCCCCCCCCCchHH----HHHHH--HhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEeeCCeeEEEec
Q 005761 173 LRKIALGEDGSELGGGCPCIA----HVKDC--ISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYIS 246 (678)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~ly~----dv~~~--~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~~~~~~I~Y~s 246 (678)
....+. .+... -.+++.++.++.+. .++++.+.+ ||..|++.+.++.++++++| +
T Consensus 193 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~--~gi~vi~tp-GHtpG~~~~~i~~~~~~vlf-~ 253 (331)
T 1p9e_A 193 ---------------SKGFFKGAMASLNPYVKAGKFKPFSGNTDLV--PGIKALASH-GHTPGHTTYVVESQGQKLAL-L 253 (331)
T ss_dssp ---------------SCHHHHHHHHHHHHHHHTTCBCCBCSSEECS--TTEEEEECT-TSSTTCEEEEEEETTEEEEE-C
T ss_pred ---------------hhHHHHHHHHHhhhhcccCceEEeCCCCEEc--ccEEEEEcC-CCChhCEEEEEEECCcEEEE-E
Confidence 001111 11111 13455566555443 357777654 99999999999998999999 9
Q ss_pred CCCC
Q 005761 247 GSNF 250 (678)
Q Consensus 247 gD~~ 250 (678)
||..
T Consensus 254 GD~~ 257 (331)
T 1p9e_A 254 GDLI 257 (331)
T ss_dssp TTSC
T ss_pred ECcc
Confidence 9983
No 36
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=98.83 E-value=4e-09 Score=108.15 Aligned_cols=142 Identities=18% Similarity=0.122 Sum_probs=90.0
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
+.+||+|+.++..||+|||..... . .+. +..+ ...+++.
T Consensus 37 ~~~~~li~~~~~~iLID~G~~~~~-----------~-----------------------~l~---~~l~----~~g~~~~ 75 (269)
T 1sml_A 37 DLTALLVQTPDGAVLLDGGMPQMA-----------S-----------------------HLL---DNMK----ARGVTPR 75 (269)
T ss_dssp TBCCEEEEETTEEEEECCBSGGGH-----------H-----------------------HHH---HHHH----HTTCCGG
T ss_pred CcEEEEEEeCCceEEEECCCCccH-----------H-----------------------HHH---HHHH----HcCCChH
Confidence 468999999999999999976210 0 000 0110 1223456
Q ss_pred CccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchh
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ 171 (678)
+||+|++||. ||+||++.|.+. +..+||+++.+.+..+... ... ..|..
T Consensus 76 ~i~~IilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~l~~~~---------------~~~---~~~~~--------- 126 (269)
T 1sml_A 76 DLRLILLSHAHADHAGPVAELKRR--TGAKVAANAESAVLLARGG---------------SDD---LHFGD--------- 126 (269)
T ss_dssp GEEEEECSCCSHHHHTTHHHHHHH--SSCEEEECHHHHHHHHTTT---------------CSB---TTTBT---------
T ss_pred HCcEEEeCCCCccccCCHHHHHHh--cCCeEEECHHHHHHHhcCC---------------ccc---ccccc---------
Confidence 8999999999 999999999874 4689999998865432110 000 00000
Q ss_pred hhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEEee--CCe--eEEEec
Q 005761 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISG--AKG--NIAYIS 246 (678)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I~~--~~~--~I~Y~s 246 (678)
. ..+.+. ...+.++-++.+.+ |+++++++.. ||..|+.++.++. ++. .++|
T Consensus 127 ----------~---~~~~~~--------~~~~~~~~g~~~~~-g~~~i~~~~~pGHt~g~~~~~~~~~~~~~~~~l~~-- 182 (269)
T 1sml_A 127 ----------G---ITYPPA--------NADRIVMDGEVITV-GGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAY-- 182 (269)
T ss_dssp ----------S---SCCCCC--------CCSEECCTTCEEEE-TTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEE--
T ss_pred ----------c---cCCCCC--------CCCeEeCCCCEEEE-CCEEEEEEECCCCCcccEEEEEecccCCceeEEEE--
Confidence 0 000000 12456778889999 5788887754 8999999999865 233 4444
Q ss_pred CCC
Q 005761 247 GSN 249 (678)
Q Consensus 247 gD~ 249 (678)
||.
T Consensus 183 gD~ 185 (269)
T 1sml_A 183 ADS 185 (269)
T ss_dssp CCC
T ss_pred ecc
Confidence 676
No 37
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=98.82 E-value=1.1e-08 Score=106.71 Aligned_cols=160 Identities=19% Similarity=0.251 Sum_probs=101.0
Q ss_pred CEEEEecCCCCCCCCceEEEEE--CCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccC
Q 005761 1 MKFTCLCQGGGFNFPPCHILNV--SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~--~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (678)
|+|+.+-.+ ..+.+||+|.. ++..+|+|||++... .....+ + . +...+..
T Consensus 5 m~i~~~~~~--~~~~~~yli~~~~~~~~ilID~g~~~~~------~~~~~~---~-----------~----~~~~l~~-- 56 (298)
T 4efz_A 5 MTVEGFFDP--ATCTISYLLFDSGSGECALIDSVLDYDP------KSGRTR---T-----------A----SADQLIA-- 56 (298)
T ss_dssp CEEEEEECT--TTCBEEEEEECTTTCEEEEESCCBEEET------TTTEEE---C-----------H----HHHHHHH--
T ss_pred eEEEEEecC--CcccEEEEEEECCCCeEEEEcCCCCccc------cccccC---c-----------c----cHHHHHH--
Confidence 778777543 44788999976 567999999987431 000000 0 0 0000110
Q ss_pred CcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCC
Q 005761 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (678)
Q Consensus 79 p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~ 156 (678)
+.+ ... .+|++||+||. ||++|+++|.+.+ .++||+++.+.++.+.... .++...
T Consensus 57 -~l~------~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~--~a~i~~~~~~~~~~~~~~~-----------~~~~~~-- 113 (298)
T 4efz_A 57 -RVA------ALG-ARVRWLLETHVHADHLSAAPYLKTRV--GGEIAIGRHVTRVQDVFGK-----------LFNAGP-- 113 (298)
T ss_dssp -HHH------HHT-CEEEEEECSSCCSSSBCCHHHHHHHH--CCEEEEETTHHHHHHHHHH-----------HTTCCT--
T ss_pred -HHH------HCC-CcceEEEECCCchhhhhhHHHHHHHh--CCcEEEChhHHHHHHHHHH-----------hcCCcc--
Confidence 110 011 24999999999 9999999998844 6899999988765432111 000000
Q ss_pred CcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEE
Q 005761 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (678)
Q Consensus 157 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I 235 (678)
.+ +. .. . ...+.+..++++.+ |+++++++.+ ||..|++.+.+
T Consensus 114 --~~---------~~---------~~------~----------~~~~~~~~g~~l~~-g~~~i~vi~tPGHT~g~~~~~~ 156 (298)
T 4efz_A 114 --AF---------AH---------DG------S----------QFDRLLDDGDTLAL-GALSIRAMHTPGHTPACMTYVV 156 (298)
T ss_dssp --TS---------CS---------SS------T----------TSSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEE
T ss_pred --cc---------cc---------cc------c----------CCCEEeCCCCEEEE-CCEEEEEEECCCCCcccEEEEE
Confidence 00 00 00 0 11257888999999 6788887765 89999999999
Q ss_pred eeCCee------EEEecCCC
Q 005761 236 SGAKGN------IAYISGSN 249 (678)
Q Consensus 236 ~~~~~~------I~Y~sgD~ 249 (678)
..++++ ++| |||.
T Consensus 157 ~~~~~~~~~~~~~lf-tGD~ 175 (298)
T 4efz_A 157 TEAHAAHDARDAAAF-VGDT 175 (298)
T ss_dssp EETTCCGGGCBCEEE-CCSS
T ss_pred CCCcccccCCceEEE-EcCc
Confidence 887655 999 9998
No 38
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=98.82 E-value=2.2e-09 Score=111.63 Aligned_cols=135 Identities=14% Similarity=0.169 Sum_probs=88.1
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
+.+||+|+.++..||+|||..... . .+. ...+ ...+++.
T Consensus 57 ~~~~~li~~~~~~iLiD~G~~~~~-----------~-----------------------~~~---~~l~----~~g~~~~ 95 (303)
T 4ax1_B 57 GISALLVTSDAGHILVDAATPQAG-----------P-----------------------QIL---ANIR----ALGFRPE 95 (303)
T ss_dssp SSCCEEECCTTCEEEECCBSTTCH-----------H-----------------------HHH---HHHH----HTTCCGG
T ss_pred CceEEEEEeCCcEEEEECCCcccH-----------H-----------------------HHH---HHHH----HcCCCHH
Confidence 678999999999999999975210 0 000 0100 1123456
Q ss_pred CccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchh
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ 171 (678)
+||+|++||. ||+++++.+.+. +..+||+++.+.++.+.... ....+.|..
T Consensus 96 ~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~l~~~~~----------------~~~~~~~~~--------- 148 (303)
T 4ax1_B 96 DVRAIVFSHEHFDHAGSLAELQKA--TGAPVYARAPAIDTLKRGLP----------------DRTDPNFEV--------- 148 (303)
T ss_dssp GEEEEECSCSSHHHHTTHHHHHHH--HCCCEEEEHHHHHHHHHTSC----------------CTTSTTGGG---------
T ss_pred HCcEEEcCCCCccccCCHHHHHhh--cCCEEEEcHHHHHHHhcccc----------------Ccccccccc---------
Confidence 7999999999 999999999874 46899999998775432110 000000000
Q ss_pred hhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe-cCCCcccEEEEEeeC
Q 005761 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDIGACNWIISGA 238 (678)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~-sGH~lGs~~~~I~~~ 238 (678)
.. ...+ ....+.+..++++++ |+++++++. .||..|+..+.+...
T Consensus 149 ---------~~----~~~~--------~~~~~~~~~g~~~~~-g~~~v~~~~~pgHt~g~~~~~~~~~ 194 (303)
T 4ax1_B 149 ---------AE----PVAP--------VANIVTLADDGVVSV-GPLALTAVASPGHTPGGTSWTWRSC 194 (303)
T ss_dssp ---------CC----CCCC--------CSCEEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEEEEE
T ss_pred ---------cc----CcCC--------CCCcEEeCCCCEEEE-CCeEEEEEeCCCCCccceEEEEEec
Confidence 00 0000 124678889999999 578888775 689999999998753
No 39
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=98.80 E-value=2.1e-08 Score=104.69 Aligned_cols=159 Identities=12% Similarity=0.035 Sum_probs=96.4
Q ss_pred EEEecCCCCCCCCceEEE-EECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcc
Q 005761 3 FTCLCQGGGFNFPPCHIL-NVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWY 81 (678)
Q Consensus 3 l~~Lg~~~~~~~~sc~lL-~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 81 (678)
++.+|.. +.+||++ ..++..+|+|||..... .. +...+..
T Consensus 16 v~~ig~~----~~n~~li~~~~~~~iLID~G~~~~~--------~~--------------------------~~~~l~~- 56 (303)
T 2vw8_A 16 LCLLGDV----QVPVFLLRLGEASWALVEGGISRDA--------EL--------------------------VWADLCR- 56 (303)
T ss_dssp EEEESCT----TSCEEEEEEETTEEEEECCCCGGGH--------HH--------------------------HHHHHHH-
T ss_pred eEEecCC----CceEEEEEeCCCceEEEECCCCCcH--------HH--------------------------HHHHHHH-
Confidence 4566432 6789999 48889999999986210 00 0000000
Q ss_pred cccccccCC-CCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHH-HHH-HHHHhhhhhcCCCCCC
Q 005761 82 KTVNNLHLW-NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMME-ELI-CMNMEYRQFYGAEESS 156 (678)
Q Consensus 82 ~~~~~~~~~-d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~-d~~-~~~~~~~~~~~~~~~~ 156 (678)
. + +..+|++|++||. ||+||++.+.+.. -..+||+++.+.+..+.... ... .+....
T Consensus 57 ------~-~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~-~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 118 (303)
T 2vw8_A 57 ------W-VADPSQVHYWLITHKHYDHCGLLPYLCPRL-PNVQVLASERTCQAWKSESAVRVVERLNRQL---------- 118 (303)
T ss_dssp ------H-CSCGGGEEEEECCCCSTTTTTTHHHHGGGC-TTCEEEEEHHHHHHTTCHHHHHHHHHHHHHT----------
T ss_pred ------H-hcCcccceEEEeccCCccccCCHHHHHHhC-CCCeEEECHHHHHHHhccchhhHHHHHHHHH----------
Confidence 0 1 3568999999998 9999999998732 16899999999775432110 000 000000
Q ss_pred CcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEE
Q 005761 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (678)
Q Consensus 157 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I 235 (678)
...|... . .. .+ +. . ..++.+..++.+++.|+.+++++.. ||..|++.+.+
T Consensus 119 ~~~~~~~------------------~---~~-~~-~~----~-~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~~~~~~ 170 (303)
T 2vw8_A 119 LRAEQRL------------------P---EA-CA-WD----A-LPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYD 170 (303)
T ss_dssp CCTTCCC------------------C---CC-CC-GG----G-SCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEE
T ss_pred HHhhccc------------------c---cc-cC-CC----C-CCceEcCCCCEEecCCCeEEEEEECCCCCcccEEEEE
Confidence 0001000 0 00 00 00 0 1346778889999954477776655 99999999988
Q ss_pred eeCCeeEEEecCCC
Q 005761 236 SGAKGNIAYISGSN 249 (678)
Q Consensus 236 ~~~~~~I~Y~sgD~ 249 (678)
. ..+++| |||.
T Consensus 171 ~--~~~~lf-~GD~ 181 (303)
T 2vw8_A 171 V--RRRRLF-CGDA 181 (303)
T ss_dssp T--TTTEEE-EETT
T ss_pred C--CCCEEE-EcCc
Confidence 5 568999 9998
No 40
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.80 E-value=3e-09 Score=115.55 Aligned_cols=97 Identities=16% Similarity=0.116 Sum_probs=72.9
Q ss_pred CCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhh
Q 005761 90 WNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (678)
Q Consensus 90 ~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (678)
++..+||+|++||. ||+||++.|.+... ..+||+++.+.+..+..+ ..
T Consensus 67 ~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~~~~~~~~----~~------------------------- 116 (402)
T 1e5d_A 67 IDPKKIDYLVIQHLELDHAGALPALIEACQ-PEKIFTSSLGQKAMESHF----HY------------------------- 116 (402)
T ss_dssp SCGGGCCEEEECCCSHHHHTTHHHHHHHHC-CSEEEEEHHHHHHHHHHH----CC-------------------------
T ss_pred CCcccCCEEEeCCCCccccccHHHHHHHCC-CCEEEEChHHHHHHHHHh----CC-------------------------
Confidence 35678999999999 99999999987331 589999999977543211 00
Q ss_pred hchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec--CCCcccEEEEEeeCCeeEEEe
Q 005761 168 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS--GLDIGACNWIISGAKGNIAYI 245 (678)
Q Consensus 168 ~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s--GH~lGs~~~~I~~~~~~I~Y~ 245 (678)
+ . .+++.++.++.+++ |+++++++++ ||..|++.+.+ +..+++|
T Consensus 117 --~----------------~------------~~~~~~~~g~~~~~-g~~~~~~~~~p~gH~~~~~~~~~--~~~~~l~- 162 (402)
T 1e5d_A 117 --K----------------D------------WPVQVVKHGETLSL-GKRTVTFYETRMLHWPDSMVSWF--ADEKVLI- 162 (402)
T ss_dssp --S----------------S------------CCEEEECTTCEEEC-SSCEEEEEECTTSSSTTCEEEEE--TTTTEEE-
T ss_pred --C----------------C------------CceEEcCCCCEEEE-CCCEEEEEeCCCCCCCCcEEEEE--CCCCEEE-
Confidence 0 0 14567888999999 5777887766 79999998876 4678999
Q ss_pred cCCCC
Q 005761 246 SGSNF 250 (678)
Q Consensus 246 sgD~~ 250 (678)
|||..
T Consensus 163 ~GD~~ 167 (402)
T 1e5d_A 163 SNDIF 167 (402)
T ss_dssp EETTT
T ss_pred ecccc
Confidence 99983
No 41
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=98.80 E-value=5.4e-09 Score=104.06 Aligned_cols=127 Identities=13% Similarity=0.093 Sum_probs=89.3
Q ss_pred CCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCC
Q 005761 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (678)
Q Consensus 13 ~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~ 92 (678)
.+.+||+|+.++..+|+|||...... ..+. ...+ ....
T Consensus 25 ~~~n~~li~~~~~~iLiD~G~~~~~~---------------------------------~~~~---~~l~-----~~~g- 62 (223)
T 1m2x_A 25 YAANAVYLVTDKGVVVIDCPWGEDKF---------------------------------KSFT---DEIY-----KKHG- 62 (223)
T ss_dssp EEEEEEEEEETTEEEEESCCSSGGGH---------------------------------HHHH---HHHH-----HHHC-
T ss_pred ccccEEEEEeCCEEEEEeCCCChhHH---------------------------------HHHH---HHHH-----HHhC-
Confidence 35789999999999999999862210 0000 0110 0001
Q ss_pred CCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhch
Q 005761 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (678)
Q Consensus 93 ~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~ 170 (678)
.+||+|++||. ||+||++.+.+ ...+||+++.+.+..+..
T Consensus 63 ~~i~~vi~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~~~----------------------------------- 104 (223)
T 1m2x_A 63 KKVIMNIATHSHDDRAGGLEYFGK---IGAKTYSTKMTDSILAKE----------------------------------- 104 (223)
T ss_dssp CCEEEEECSSSSTTTTTTHHHHHH---TTCEEEEEHHHHHHHHHT-----------------------------------
T ss_pred CCeEEEEeccCCccccCchhhHhh---CCCeEEEcHHHHHHHHhc-----------------------------------
Confidence 47999999998 99999999987 468999999986542210
Q ss_pred hhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEE--ecCCCcccEEEEEeeCCeeEEEecCC
Q 005761 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF--SSGLDIGACNWIISGAKGNIAYISGS 248 (678)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~--~sGH~lGs~~~~I~~~~~~I~Y~sgD 248 (678)
+. . .....+..++.+.+ |+.+++++ ..||..|++.+.++ ..+++| |||
T Consensus 105 -----------~~-~--------------~~~~~~~~g~~~~~-g~~~i~~~~~~pgHt~~~~~~~~~--~~~~lf-~GD 154 (223)
T 1m2x_A 105 -----------NK-P--------------RAQYTFDNNKSFKV-GKSEFQVYYPGKGHTADNVVVWFP--KEKVLV-GGC 154 (223)
T ss_dssp -----------TC-C--------------CCSEEESSCEEEEE-TTEEEEEECCCSSSSSSCCEEEET--TTTEEE-EET
T ss_pred -----------Cc-c--------------CCceecCCCceEEE-CCEEEEEEecCCCCCCCCEEEEEC--CCCEEE-Eec
Confidence 00 0 01245667888888 57899987 47999999999875 568999 999
Q ss_pred C
Q 005761 249 N 249 (678)
Q Consensus 249 ~ 249 (678)
.
T Consensus 155 ~ 155 (223)
T 1m2x_A 155 I 155 (223)
T ss_dssp T
T ss_pred c
Confidence 7
No 42
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=98.78 E-value=1.2e-08 Score=102.98 Aligned_cols=163 Identities=12% Similarity=0.168 Sum_probs=94.9
Q ss_pred EEEecCCCCCCCCceEEEEEC-CEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcc
Q 005761 3 FTCLCQGGGFNFPPCHILNVS-GFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWY 81 (678)
Q Consensus 3 l~~Lg~~~~~~~~sc~lL~~~-~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 81 (678)
++++.+. ...+.+||+|+.+ +..+|+|||..... . ..+. ...
T Consensus 19 v~~i~~~-~~~~~n~~li~~~~~~~iLiD~G~~~~~----------~-----------------------~~l~---~~l 61 (246)
T 2fhx_A 19 VFVVTDR-DFYSSNVLVAKMLDGTVVIVSSPFENLG----------T-----------------------QTLM---DWV 61 (246)
T ss_dssp EEEEEET-TTTTEEEEEEECTTSEEEEESCCSSHHH----------H-----------------------HHHH---HHH
T ss_pred EEEEECc-CCCCCCEEEEEeCCCeEEEEeCCCCHHH----------H-----------------------HHHH---HHH
Confidence 3455443 3346789999876 47899999986210 0 0000 011
Q ss_pred cccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcc
Q 005761 82 KTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQ 159 (678)
Q Consensus 82 ~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~ 159 (678)
+ ..++...+ .|++||+ ||+||++++.+ +..+||+++.+.+..+........... +.+
T Consensus 62 ~-----~~~~~~~~-~vi~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~--------- 120 (246)
T 2fhx_A 62 A-----KTMKPKKV-VAINTHFHLDGTGGNEIYKK---MGAETWSSDLTKQLRLEENKKDRIKAA---EFY--------- 120 (246)
T ss_dssp H-----HHHCCSEE-EEECCSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHHHHHHHHHH---HHC---------
T ss_pred H-----HhcCCCcE-EEEeCCCCccccChHHHHhh---cCCEEEEcHHHHHHHHhcchhhhHHHH---hhh---------
Confidence 0 01234455 6999999 99999999976 468999999998876543322111000 000
Q ss_pred cchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEE--ecCCCcccEEEEEee
Q 005761 160 WMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF--SSGLDIGACNWIISG 237 (678)
Q Consensus 160 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~--~sGH~lGs~~~~I~~ 237 (678)
.... ++...... .. .+ .+++..+.-++.+++ |+.+++++ ..||..|++.+.+.
T Consensus 121 -~~~~----~~~~~~~~----~~------~~--------~~~~~~~~~g~~l~~-g~~~i~~~~~~pGHt~g~~~~~~~- 175 (246)
T 2fhx_A 121 -KNED----LKRRILSS----HP------VP--------ADNVFDLKQGKVFSF-SNELVEVSFPGPAHSPDNVVVYFP- 175 (246)
T ss_dssp -CCHH----HHHHHHHT----CC------CC--------CSEEECTTTCEEEEE-TTEEEEEECCCCSSSTTCCEEEET-
T ss_pred -cccc----chhhhccc----cc------CC--------CCceeecCCCCEEEE-CCEEEEEEeCCCCCCCCCEEEEEc-
Confidence 0000 00000000 00 00 013345666788888 57888887 36999999999875
Q ss_pred CCeeEEEecCCCC
Q 005761 238 AKGNIAYISGSNF 250 (678)
Q Consensus 238 ~~~~I~Y~sgD~~ 250 (678)
..+++| |||..
T Consensus 176 -~~~~lf-~GD~~ 186 (246)
T 2fhx_A 176 -KKKLLF-GGCMI 186 (246)
T ss_dssp -TTTEEE-EETTC
T ss_pred -CCCEEE-ECCEe
Confidence 568999 99983
No 43
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.76 E-value=1.3e-08 Score=101.21 Aligned_cols=89 Identities=7% Similarity=-0.083 Sum_probs=62.9
Q ss_pred EEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCccc
Q 005761 3 FTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYK 82 (678)
Q Consensus 3 l~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 82 (678)
++.+.++ ...+.+||+|+.++..||+|||..... . ..+. ...
T Consensus 12 v~~~~~~-~~~~~n~~li~~~~~~iLiD~G~~~~~-----------~----------------------~~~~---~~l- 53 (227)
T 3iog_A 12 VYVVEDN-YYVQENSMVYFGAKGVTVVGATWTPDT-----------A----------------------RELH---KLI- 53 (227)
T ss_dssp EEEEEEC-SSSCEEEEEEECSSCEEEESCCSSHHH-----------H----------------------HHHH---HHH-
T ss_pred EEEEECC-CcccCcEEEEEeCCeEEEEECCCChHH-----------H----------------------HHHH---HHH-
Confidence 3445443 356789999999889999999975221 0 0010 011
Q ss_pred ccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHH
Q 005761 83 TVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMME 137 (678)
Q Consensus 83 ~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~ 137 (678)
..+...+|++|++||. ||+||++.+.+ +..+||+++.+.++.+....
T Consensus 54 -----~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~~~~~ 102 (227)
T 3iog_A 54 -----KRVSRKPVLEVINTNYHTDRAGGNAYWKS---IGAKVVSTRQTRDLMKSDWA 102 (227)
T ss_dssp -----HTTCCSCEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHHH
T ss_pred -----HHhcCCCeEEEEeCCCchhhcChHHHHhh---CCCeEEECHHHHHHHHHhhH
Confidence 1134678999999999 99999999875 57899999999887765444
No 44
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=98.75 E-value=1.2e-08 Score=107.00 Aligned_cols=166 Identities=14% Similarity=0.086 Sum_probs=96.1
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
..+||+|+.++..+|+|||..... ... .+. ...+ ...+++.
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~---------~~~-----------------------~l~---~~l~----~~g~~~~ 61 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRA---------ARG-----------------------ALE---LHLA----ELGLCFQ 61 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHH---------HHH-----------------------HHH---HHHH----HTTCCGG
T ss_pred cEEEEEEEcCCceEEEECCCCCHH---------HHH-----------------------HHH---HHHH----HcCCChh
Confidence 478999999889999999987321 000 000 0000 1123456
Q ss_pred CccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHH---HHHHHhhhhhcCCCCCCCcccchhhhhhh
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEEL---ICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~---~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (678)
+|++|++||. ||+||++.+.+. ..+||+++.+.+..+...... ...........|.... + ...
T Consensus 62 ~i~~Vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~-----~~~ 129 (317)
T 2zo4_A 62 DVKTILLTHHHPDHYGLSGFFEGL---GARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEG----A-----LQG 129 (317)
T ss_dssp GCCEEEESCCSHHHHTTHHHHHHT---TCEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC--------------
T ss_pred hcCEEEEcCCCCcccccHHHHHhC---CCEEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHH----H-----HHH
Confidence 7999999999 999999999874 689999999976554322100 0000000000000000 0 000
Q ss_pred chhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEEeeCCeeEEEecC
Q 005761 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGAKGNIAYISG 247 (678)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I~~~~~~I~Y~sg 247 (678)
+........ .. . ........+.-++.+.+ |+.+++++.+ ||..|++++.+ +..+++| ||
T Consensus 130 ~~~~~~~~~---~~--~-----------~~~~~~~~~~~g~~l~~-gg~~~~~i~tpGHt~g~~~~~~--~~~~~lf-~G 189 (317)
T 2zo4_A 130 IRETVEKTR---ER--V-----------HPPQNPLPLRDGEALEV-AGKRLRVLWTPGHADGHAAFYL--EEEGVLL-AG 189 (317)
T ss_dssp --CHHHHHH---TT--C-----------CCCSSCEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEE--TTTTEEE-EE
T ss_pred HHHhccccc---cc--C-----------CCCCCceEECCCCEEEe-CCceEEEEECCCCCcccEEEEe--CCCCEEE-EC
Confidence 000000000 00 0 00023567888999999 5788888876 99999999976 5678999 99
Q ss_pred CCC
Q 005761 248 SNF 250 (678)
Q Consensus 248 D~~ 250 (678)
|..
T Consensus 190 D~~ 192 (317)
T 2zo4_A 190 DAL 192 (317)
T ss_dssp TSC
T ss_pred CEe
Confidence 983
No 45
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.75 E-value=5.3e-08 Score=97.13 Aligned_cols=59 Identities=14% Similarity=0.044 Sum_probs=40.4
Q ss_pred eEEeCCCeEEEEEecCCCcc-------cEEEEEeeCCeeEEEecCCCCCcCCCCcccccccCCCCeEeec
Q 005761 210 EACYNGILIIKAFSSGLDIG-------ACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (678)
Q Consensus 210 ~v~i~g~l~it~~~sGH~lG-------s~~~~I~~~~~~I~Y~sgD~~~~~h~~~~d~~~l~~~d~li~~ 272 (678)
.+++ |+++|+++++.|..+ +++|+|+.++.+|+| +||+....... -...++++|+++++
T Consensus 80 ~~~~-~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i~~-~GDt~~~~~~~--~~~~~~~~Dvlil~ 145 (220)
T 1vjn_A 80 AYTV-NGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCH-LGDLGHVLTPA--QVEEIGEIDVLLVP 145 (220)
T ss_dssp EEEE-TTEEEEEEEEEEC-------CEEEEEEEEETTEEEEE-CTTCCSCCCHH--HHHHHCCCSEEEEE
T ss_pred eEEE-CCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEEEE-eCCCCCcchHH--HHHhhCCCCEEEEc
Confidence 3456 579999999999873 589999999999999 99984221100 01224578888764
No 46
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.72 E-value=2.7e-09 Score=107.71 Aligned_cols=137 Identities=12% Similarity=0.101 Sum_probs=89.0
Q ss_pred CCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCC
Q 005761 12 FNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWN 91 (678)
Q Consensus 12 ~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d 91 (678)
..+.+||+|+.++..||+|||...... ..+. .+.+ ..-
T Consensus 45 ~~~~n~~li~~~~~~iLID~G~~~~~~---------------------------------~~l~---~~l~------~~~ 82 (243)
T 4hl2_A 45 AVASNGLIVRDGGRVLVVDTAWTDDQT---------------------------------AQIL---NWIK------QEI 82 (243)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH---------------------------------HHHH---HHHH------HHT
T ss_pred cccceEEEEEECCcEEEEECCCCCccH---------------------------------HHHH---HHHH------Hhh
Confidence 456899999999999999999752110 0000 0110 000
Q ss_pred CCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhc
Q 005761 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (678)
Q Consensus 92 ~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l 169 (678)
...||+|++||. ||+||++.+.+. ..+||+++.+.++.+.. .... ..
T Consensus 83 ~~~i~~vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~~~~~-----------------~~~~-~~---------- 131 (243)
T 4hl2_A 83 NLPVALAVVTHAHQDKMGGMDALHAA---GIATYANALSNQLAPQE-----------------GMVA-AQ---------- 131 (243)
T ss_dssp CCCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEEHHHHHHGGGT-----------------TCCC-CS----------
T ss_pred CCCeeEEEECCCCccccCCHHHHHhC---CCeEEECHHHHHHHhcc-----------------cccc-cc----------
Confidence 125999999999 999999999873 78999999886542210 0000 00
Q ss_pred hhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEeeCCeeEEEecCCC
Q 005761 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249 (678)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~~~~~~I~Y~sgD~ 249 (678)
..+. +.....+..++.+.+ |++++.....||..|++.+.+. ..+++| |||.
T Consensus 132 --------------------~~~~-----~~~~~~~~~g~~~~~-g~~~v~~~~pGHt~g~~~~~~~--~~~~lf-~GD~ 182 (243)
T 4hl2_A 132 --------------------HSLT-----FAANGWVEPATAPNF-GPLKVFYPGPGHTSDNITVGID--GTDIAF-GGCL 182 (243)
T ss_dssp --------------------EEEC-----BCTTSBBCGGGSTTC-TTEEEECCCSSSSTTCCEEEET--TTTEEE-CTTT
T ss_pred --------------------cccc-----cccceEecCCCeEEE-CCEEEEeCCCCCCcCCEEEEEc--CCCEEE-Ecce
Confidence 0000 011234555666777 5788855688999999999985 568999 9998
Q ss_pred C
Q 005761 250 F 250 (678)
Q Consensus 250 ~ 250 (678)
.
T Consensus 183 ~ 183 (243)
T 4hl2_A 183 I 183 (243)
T ss_dssp C
T ss_pred e
Confidence 3
No 47
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=98.72 E-value=1.7e-08 Score=102.50 Aligned_cols=130 Identities=13% Similarity=0.079 Sum_probs=90.6
Q ss_pred CEEEEecCCCCCCCCceEEEEEC----CEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVS----GFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIF 76 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~----~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (678)
|++..+-.. ..+.+||+|+.+ +..||+|+|..... .+
T Consensus 3 m~~~~~~~~--~~~~~~yli~~~~~~~~~~ilID~g~~~~~-----------------------------------~~-- 43 (245)
T 2gcu_A 3 LLFRQLFEN--ESSTFTYLLADVSHPDKPALLIDPVDKTVD-----------------------------------RD-- 43 (245)
T ss_dssp EEEEEEEET--TTTEEEEEEEETTSTTCEEEEESCBGGGHH-----------------------------------HH--
T ss_pred cEEEEeecC--CCceEEEEEEcCCCCCCcEEEEeCCCchHH-----------------------------------HH--
Confidence 556666543 346889999984 68999999985110 00
Q ss_pred cCCcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCC
Q 005761 77 AEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE 154 (678)
Q Consensus 77 ~~p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~ 154 (678)
.++.+ ... ..|++||+||. ||++|++.|.+. ....+||+++.+..
T Consensus 44 -~~~l~------~~g-~~i~~Il~TH~H~DH~gg~~~l~~~-~~~~~v~~~~~~~~------------------------ 90 (245)
T 2gcu_A 44 -LKLID------ELG-LKLIYAMNTHVHADHVTGTGLLKTK-LPGVKSVISKASGS------------------------ 90 (245)
T ss_dssp -HHHHH------HHT-CEEEEEECSSCCSSSCBSHHHHHHH-STTCEEEEEGGGCC------------------------
T ss_pred -HHHHH------HCC-CeeeEEEeCCCChhhhhhHHHHHHh-CCCCeEEecccccc------------------------
Confidence 00110 011 15899999999 999999999762 13579999876420
Q ss_pred CCCcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEE
Q 005761 155 SSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNW 233 (678)
Q Consensus 155 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~ 233 (678)
...+.+.-++.+.+ |+++++++.+ ||..|++.+
T Consensus 91 ---------------------------------------------~~~~~~~~g~~~~~-g~~~i~v~~tpGHt~g~~~~ 124 (245)
T 2gcu_A 91 ---------------------------------------------KADLFLEPGDKVSI-GDIYLEVRATPGHTAGCVTY 124 (245)
T ss_dssp ---------------------------------------------CCSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEE
T ss_pred ---------------------------------------------cCCEEcCCCCEEEE-CCEEEEEEECCCCCCCCEEE
Confidence 01235667888888 5788888765 999999999
Q ss_pred EEeeCC----eeEEEecCCC
Q 005761 234 IISGAK----GNIAYISGSN 249 (678)
Q Consensus 234 ~I~~~~----~~I~Y~sgD~ 249 (678)
.++.++ .+++| |||.
T Consensus 125 ~~~~~~~~~~~~~lf-tGD~ 143 (245)
T 2gcu_A 125 VTGEGADQPQPRMAF-TGDA 143 (245)
T ss_dssp EECCSTTSCSSCEEE-EETT
T ss_pred EECCccccccccEEE-ECCc
Confidence 997652 48999 9998
No 48
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.71 E-value=1.6e-08 Score=106.43 Aligned_cols=87 Identities=11% Similarity=0.124 Sum_probs=67.7
Q ss_pred CCccEEEecCC--CCCChhhhhccccC-----CCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhh
Q 005761 93 SFIDVVLISSP--MGMLGLPFLTRMEG-----FSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 165 (678)
Q Consensus 93 ~~ID~IlISH~--dH~g~LP~l~~~~g-----f~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~ 165 (678)
.+|++||+||. ||++|++.|.+.+. ...+||+++.+. +
T Consensus 83 ~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~v~~~~~~~------------~----------------------- 127 (311)
T 2p18_A 83 YTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVVVVGGANDS------------I----------------------- 127 (311)
T ss_dssp CEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCEEEEEGGGT------------C-----------------------
T ss_pred CCccEEEeCCCCccccCCHHHHHHhhhhcccCCCCEEEEechhc------------C-----------------------
Confidence 58999999999 99999999987431 147899886531 0
Q ss_pred hhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEEeeCC---e-
Q 005761 166 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGAK---G- 240 (678)
Q Consensus 166 ~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I~~~~---~- 240 (678)
| .....+.-++.+.+ |+++++++.+ ||..|++.+.++.+. .
T Consensus 128 ----~-----------------------------~~~~~l~~g~~l~l-g~~~l~vi~tPGHT~g~i~~~~~~~~~~~~~ 173 (311)
T 2p18_A 128 ----P-----------------------------AVTKPVREGDRVQV-GDLSVEVIDAPCHTRGHVLYKVQHPQHPNDG 173 (311)
T ss_dssp ----T-----------------------------TCSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEEECTTCGGGC
T ss_pred ----C-----------------------------CCceEeCCCCEEEE-CCeEEEEEECCCCCcccEEEEEecCCcCCcC
Confidence 0 02345677888999 5788888876 999999999998766 7
Q ss_pred eEEEecCCC
Q 005761 241 NIAYISGSN 249 (678)
Q Consensus 241 ~I~Y~sgD~ 249 (678)
+++| |||.
T Consensus 174 ~~lf-tGD~ 181 (311)
T 2p18_A 174 VALF-TGDT 181 (311)
T ss_dssp EEEE-EETT
T ss_pred CEEE-EcCc
Confidence 9999 9998
No 49
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=98.70 E-value=2.8e-08 Score=99.15 Aligned_cols=89 Identities=9% Similarity=-0.042 Sum_probs=63.1
Q ss_pred EEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCccc
Q 005761 3 FTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYK 82 (678)
Q Consensus 3 l~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 82 (678)
++.++++ ...+.+||+|+.++..||+|||...... ..+.. ..
T Consensus 15 v~~i~~~-~~~~~n~~li~~~~~~iLiD~G~~~~~~---------------------------------~~~~~---~l- 56 (233)
T 3q6v_A 15 LYIVEDK-EYVQENSMVYIGTDGITIIGATWTPETA---------------------------------ETLYK---EI- 56 (233)
T ss_dssp EEEEEEC-SSSCEEEEEEECSSCEEEESCCSSHHHH---------------------------------HHHHH---HH-
T ss_pred EEEEeCC-CcCCCcEEEEEeCCeEEEEECCCCHHHH---------------------------------HHHHH---HH-
Confidence 4556554 4567899999998899999999873210 00000 10
Q ss_pred ccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHH
Q 005761 83 TVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMME 137 (678)
Q Consensus 83 ~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~ 137 (678)
..+...+|++|++||. ||+||++.+.+ ...+||+++.+.++.+....
T Consensus 57 -----~~~~~~~i~~ii~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~~~~~ 105 (233)
T 3q6v_A 57 -----RKVSPLPINEVINTNYHTDRAGGNAYWKT---LGAKIVATQMTYDLQKSQWG 105 (233)
T ss_dssp -----HHHCCCCEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHHH
T ss_pred -----HHhcCCCcEEEEECCCChhhhChHHHHhh---CCCEEEEcHHHHHHHHhhhH
Confidence 1123568999999999 99999999874 46899999999887665443
No 50
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=98.68 E-value=2.2e-08 Score=113.50 Aligned_cols=176 Identities=11% Similarity=-0.007 Sum_probs=99.0
Q ss_pred CEEEEecCCCCCCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCc
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (678)
|+|++|.-+ .-.++|+||+.++..||+|||..... | .+..++.|- .... . ......-...+ .|+
T Consensus 6 ~~I~~ldvG--~gqg~~~lI~~~~~~iLID~G~~~~~-----~--~~~~~~~~~-~~~~--~-~~~~~~~~~~l---~~~ 69 (547)
T 2bib_A 6 NKIHFINVQ--EGGSDAIILESNGHFAMVDTGEDYDF-----P--DGSDSRYPW-REGI--E-TSYKHVLTDRV---FRR 69 (547)
T ss_dssp EEEEEECBS--SSBCCEEEEEETTEEEEEECCCCSCC-----C--CSSSTTSCC-CTTC--C-CCGGGCCHHHH---HHH
T ss_pred ceEEEEEcC--CCCceEEEEEeCCeEEEEeCCCCCcc-----c--ccccccccc-cccc--c-ccccchhHHHH---HHH
Confidence 578888654 22578999999999999999987421 0 000000000 0000 0 00000000001 122
Q ss_pred ccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCc
Q 005761 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (678)
Q Consensus 81 ~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~ 158 (678)
. .......||+|||||+ ||+++|+.|.+... ..+||+++.+........ .
T Consensus 70 L------~~~gi~~id~vilTH~H~DHiggl~~l~~~~~-~~~i~~~~~~~~~~~~~~---------------------~ 121 (547)
T 2bib_A 70 L------KELSVQKLDFILVTHTHSDHIGNVDELLSTYP-VDRVYLKKYSDSRITNSE---------------------R 121 (547)
T ss_dssp H------HHTTCCCBSCEECCCSCHHHHTTHHHHHHHSC-BSEEECCCCCGGGBSCGG---------------------G
T ss_pred H------HhcCcccccEEEEcCCCccccCCHHHHHHhCC-ccEEEECcccccccCChH---------------------H
Confidence 1 1234578999999999 99999999987432 236999876543210000 0
Q ss_pred ccchhhhhhhchhhhhhhcccCCCCCCCCCCch--HHHHHHHHh--cce----EecCCCeEEeCCCeEEEEEec---CC-
Q 005761 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPC--IAHVKDCIS--KVQ----TLRFGEEACYNGILIIKAFSS---GL- 226 (678)
Q Consensus 159 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--y~dv~~~~~--~i~----~v~y~e~v~i~g~l~it~~~s---GH- 226 (678)
.|... |+++.+.+. .+. .+.-++.+++ |+++|++++. .|
T Consensus 122 ----------------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~-g~~~i~~l~~~~~~h~ 172 (547)
T 2bib_A 122 ----------------------------LWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQF-GDMDIQLYNYENETDS 172 (547)
T ss_dssp ----------------------------CTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEE-TTEEEEEESCSCCBCT
T ss_pred ----------------------------HHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEec-CCeeEEEecCccccCc
Confidence 00001 111111110 111 2456778888 5899998862 23
Q ss_pred ----------CcccEEEEEeeCCeeEEEecCCCC
Q 005761 227 ----------DIGACNWIISGAKGNIAYISGSNF 250 (678)
Q Consensus 227 ----------~lGs~~~~I~~~~~~I~Y~sgD~~ 250 (678)
-.+|+.++|+.++.+++| |||..
T Consensus 173 ~~~~~~~~~~n~~S~vl~i~~~~~~iLf-tGD~~ 205 (547)
T 2bib_A 173 SGELKKIWDDNSNSLISVVKVNGKKIYL-GGDLD 205 (547)
T ss_dssp TSCBCCBSSGGGGCCEEEEEETTEEEEE-CTTCC
T ss_pred cccccccCCCCCCcEEEEEEECCEEEEe-cCCcc
Confidence 257999999999999999 99994
No 51
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=98.68 E-value=7.1e-09 Score=103.47 Aligned_cols=126 Identities=18% Similarity=0.111 Sum_probs=87.6
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
+.+||+|+.++..+|+|||...... . .+ ..+.+ . ....
T Consensus 40 ~~n~~li~~~~~~iliD~G~~~~~~----------~-----------------------~~---~~~l~-----~-~~~~ 77 (227)
T 1mqo_A 40 PSNGLVLNTSKGLVLVDSSWDDKLT----------K-----------------------EL---IEMVE-----K-KFQK 77 (227)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHH----------H-----------------------HH---HHHHH-----H-HHTS
T ss_pred cceEEEEEeCCeEEEEECCCChHHH----------H-----------------------HH---HHHHH-----H-hcCC
Confidence 4689999999999999999873200 0 00 00110 0 0146
Q ss_pred CccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchh
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ 171 (678)
+|++|++||. ||++|++.+.+. ..+||+++.+.++.+..
T Consensus 78 ~i~~ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~~~~~------------------------------------ 118 (227)
T 1mqo_A 78 RVTDVIITHAHADRIGGIKTLKER---GIKAHSTALTAELAKKN------------------------------------ 118 (227)
T ss_dssp CEEEEECCCCSHHHHTTHHHHHHH---TCEEECBHHHHHHHHHT------------------------------------
T ss_pred CceEEEeCCCCchhccchHHHhhC---CcEEEeccchHHHHHhc------------------------------------
Confidence 8999999999 999999999874 58999999886543210
Q ss_pred hhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEE--ecCCCcccEEEEEeeCCeeEEEecCCC
Q 005761 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF--SSGLDIGACNWIISGAKGNIAYISGSN 249 (678)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~--~sGH~lGs~~~~I~~~~~~I~Y~sgD~ 249 (678)
+. . ..+..+..++.+.+ |+++++++ ..||..|++.+.+. ..+++| |||.
T Consensus 119 ----------~~-~--------------~~~~~~~~~~~~~~-g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf-~GD~ 169 (227)
T 1mqo_A 119 ----------GY-E--------------EPLGDLQTVTNLKF-GNMKVETFYPGKGHTEDNIVVWLP--QYNILV-GGCL 169 (227)
T ss_dssp ----------TC-C--------------CCCCCBCSEEEEEE-TTEEEEEECCCCSSSSSCCEEEET--TTTEEE-EETT
T ss_pred ----------CC-C--------------CCccccCCCCeeeE-CCEEEEEEecCCCCCCCCEEEEEC--CCCEEE-Eeee
Confidence 00 0 01223444667788 67889876 47999999999874 568999 9998
No 52
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.68 E-value=2e-08 Score=109.03 Aligned_cols=97 Identities=16% Similarity=0.044 Sum_probs=71.8
Q ss_pred CCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhh
Q 005761 91 NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (678)
Q Consensus 91 d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (678)
+..+||+|++||. ||++|++.+.+.. -..+||+++.+.+..+.. ...
T Consensus 72 ~~~~i~~ii~TH~H~DH~gg~~~l~~~~-p~~~v~~~~~~~~~~~~~----~~~-------------------------- 120 (404)
T 2ohh_A 72 GMERVDYIIQNHVEKDHSGVLVELHRRF-PEAPIYCTEVAVKGLLKH----YPS-------------------------- 120 (404)
T ss_dssp TCCCCCEEECSCCSHHHHTTHHHHHHHS-TTCCEEECHHHHHHHHHH----CGG--------------------------
T ss_pred CccCCCEEEeCCCCCcccchHHHHHHHC-CCCEEEECHHHHHHHHHH----hcc--------------------------
Confidence 4678999999998 9999999998732 158999999887643211 000
Q ss_pred chhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec--CCCcccEEEEEeeCCeeEEEec
Q 005761 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS--GLDIGACNWIISGAKGNIAYIS 246 (678)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s--GH~lGs~~~~I~~~~~~I~Y~s 246 (678)
|. . ..++.+..++.+++ |+.+++++.+ ||..|+..+.+. ..+++| |
T Consensus 121 -~~----------~-----------------~~~~~~~~g~~~~~-g~~~i~~~~~p~gH~~~~~~~~~~--~~~~lf-~ 168 (404)
T 2ohh_A 121 -LR----------E-----------------AEFMTVKTGDVLDL-GGKTLTFLETPLLHWPDSMFTLLD--EDGILF-S 168 (404)
T ss_dssp -GG----------G-----------------SCEEECCTTCEEEC-SSCEEEEEECTTSSSTTCEEEEEE--TTTEEE-C
T ss_pred -cc----------c-----------------CCceEcCCCCEEEE-CCEEEEEEeCCCCCCCCceEEEEC--CCcEEE-e
Confidence 00 0 13567788899999 5778888776 799999999875 468999 9
Q ss_pred CCCC
Q 005761 247 GSNF 250 (678)
Q Consensus 247 gD~~ 250 (678)
||..
T Consensus 169 GD~~ 172 (404)
T 2ohh_A 169 NDAF 172 (404)
T ss_dssp TTTT
T ss_pred cCcc
Confidence 9983
No 53
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=98.67 E-value=1.2e-08 Score=102.19 Aligned_cols=127 Identities=14% Similarity=0.165 Sum_probs=88.8
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
+.+||+|+.++..||+|||...... ..+. ...+ .....
T Consensus 36 ~~n~~li~~~~~~iLiD~G~~~~~~---------------------------------~~~~---~~l~------~~~~~ 73 (232)
T 1a7t_A 36 PSNGMIVINNHQAALLDTPINDAQT---------------------------------EMLV---NWVT------DSLHA 73 (232)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHH---------------------------------HHHH---HHHH------HHHCC
T ss_pred cceEEEEEeCCEEEEEeCCCCHHHH---------------------------------HHHH---HHHH------HhcCC
Confidence 4689999999999999999862110 0000 0110 00135
Q ss_pred CccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchh
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ 171 (678)
+|++|++||. ||+||++.+.+ ...+||+++.+.++.+..
T Consensus 74 ~i~~ii~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~~~------------------------------------ 114 (232)
T 1a7t_A 74 KVTTFIPNHWHGDCIGGLGYLQR---KGVQSYANQMTIDLAKEK------------------------------------ 114 (232)
T ss_dssp EEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHH------------------------------------
T ss_pred CeEEEEeCCCCccccCCHHHHHh---CCCeEEEcHHHHHHHHhc------------------------------------
Confidence 7999999999 99999999887 368999999886542210
Q ss_pred hhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe--cCCCcccEEEEEeeCCeeEEEecCCC
Q 005761 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS--SGLDIGACNWIISGAKGNIAYISGSN 249 (678)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~--sGH~lGs~~~~I~~~~~~I~Y~sgD~ 249 (678)
+ . + .....+.-++.+.+ |+.+++++. .||..|++.+.+. ..+++| |||.
T Consensus 115 ----------~--~----~---------~~~~~~~~g~~~~~-g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf-~GD~ 165 (232)
T 1a7t_A 115 ----------G--L----P---------VPEHGFTDSLTVSL-DGMPLQCYYLGGGHATDNIVVWLP--TENILF-GGCM 165 (232)
T ss_dssp ----------T--C----C---------CCSEEESSEEEEEE-TTEEEEEECCCCSSSTTCCEEEET--TTTEEE-EETT
T ss_pred ----------C--C----C---------CCceecCCCCEEEE-CCeEEEEEeCCCCCCCCCEEEEEC--CCCEEE-EcCc
Confidence 0 0 0 01345666778888 578898884 7999999999875 458999 9998
Q ss_pred C
Q 005761 250 F 250 (678)
Q Consensus 250 ~ 250 (678)
.
T Consensus 166 ~ 166 (232)
T 1a7t_A 166 L 166 (232)
T ss_dssp S
T ss_pred c
Confidence 3
No 54
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.67 E-value=5.6e-09 Score=116.25 Aligned_cols=138 Identities=14% Similarity=0.106 Sum_probs=96.6
Q ss_pred CEEEEecCCCCCCCCceEEE--EECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccC
Q 005761 1 MKFTCLCQGGGFNFPPCHIL--NVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL--~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (678)
|+++.+-.+ ..+.+||+| +.++..||+|+|.+...+..
T Consensus 4 m~i~~~~~~--~~~~n~yli~~~~~~~~ilID~g~~~~~~~~-------------------------------------- 43 (474)
T 3tp9_A 4 MYLRRFYDE--GLAHASYLVGCQETGEACVIDPARDVEPYLL-------------------------------------- 43 (474)
T ss_dssp EEEEEEEET--TTTEEEEEEEETTTCEEEEESCCSCCHHHHH--------------------------------------
T ss_pred eEEEEEecC--CceeEEEEEEECCCCEEEEEcCCCChHHHHH--------------------------------------
Confidence 667666443 346899999 66789999999977332110
Q ss_pred CcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCC
Q 005761 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (678)
Q Consensus 79 p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~ 156 (678)
..+ .. -.+|++||+||. ||++|++.|.+. +..+||+++.+...
T Consensus 44 -~l~----~~---~~~i~~Il~TH~H~DH~gg~~~l~~~--~~~~i~~~~~~~~~------------------------- 88 (474)
T 3tp9_A 44 -TAK----RE---GLRIVAALETHIHADFVSGAREMADR--AGAAICVSDEGPPE------------------------- 88 (474)
T ss_dssp -HHH----HH---TCEEEEEECSSCCSSSCCCHHHHHHH--HCCEEEEECCSCGG-------------------------
T ss_pred -HHH----Hc---CCeeEEEEcCcCchhhhCCHHHHHHH--HCCcEEEcCcchhh-------------------------
Confidence 100 01 126899999999 999999999874 46899998865321
Q ss_pred CcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEE
Q 005761 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (678)
Q Consensus 157 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I 235 (678)
|... .. + ....+.+.-++.+.+ |+++++++.. ||..|++.+.+
T Consensus 89 ---~~~~-----~~-------------------~--------~~~~~~~~~g~~~~~-g~~~i~~i~tPGHt~g~~~~~~ 132 (474)
T 3tp9_A 89 ---WKSE-----YV-------------------K--------AYPHRLLKDGDELHF-GNVRIVVMHTPGHTPEHVSYLL 132 (474)
T ss_dssp ---GCCG-----GG-------------------G--------GSSEEEECTTCEEEE-TTEEEEEEECCSSSSSCEEEEE
T ss_pred ---hccc-----cc-------------------c--------cccceECCCCCEEEE-CCEEEEEEECCCCCCCCEEEEE
Confidence 0000 00 0 012367788999999 5788887765 89999999999
Q ss_pred eeCCe-----eEEEecCCCC
Q 005761 236 SGAKG-----NIAYISGSNF 250 (678)
Q Consensus 236 ~~~~~-----~I~Y~sgD~~ 250 (678)
..++. +++| |||+.
T Consensus 133 ~~~~~~~~~~~~lf-tGD~l 151 (474)
T 3tp9_A 133 YDGKTSPDVPMALF-SGDFV 151 (474)
T ss_dssp EETTTEEEEEEEEE-EETSE
T ss_pred ecCCCCCCCceEEE-eCCcc
Confidence 87655 8999 99983
No 55
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.66 E-value=1.7e-08 Score=109.37 Aligned_cols=96 Identities=7% Similarity=-0.024 Sum_probs=71.2
Q ss_pred CCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhh
Q 005761 90 WNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (678)
Q Consensus 90 ~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (678)
++..+||+|++||. ||+||++.+.+.. -..+||+++.+.+..+.. .
T Consensus 68 ~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~~l~~~----~--------------------------- 115 (398)
T 1ycg_A 68 KDPVKLDYLVVNHTESDHAGAFPAIMELC-PDAHVLCTQRAFDSLKAH----Y--------------------------- 115 (398)
T ss_dssp CSSCCCSEEEESCCSHHHHTTHHHHHHHC-TTCEEEECHHHHHHHHHH----T---------------------------
T ss_pred cCcccCCEEEeCCCCcchhhhHHHHHHHC-CCCEEEEcHHHHHHHHHH----h---------------------------
Confidence 35678999999999 9999999998732 158999999987643211 0
Q ss_pred hchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec--CCCcccEEEEEeeCCeeEEEe
Q 005761 168 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS--GLDIGACNWIISGAKGNIAYI 245 (678)
Q Consensus 168 ~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s--GH~lGs~~~~I~~~~~~I~Y~ 245 (678)
+ ... ..++.++.++.+++ |+++++++.+ ||..|+..+.+ +..+++|
T Consensus 116 --------------~--~~~------------~~~~~~~~g~~~~~-g~~~~~~~~~p~gH~~~~~~~~~--~~~~~lf- 163 (398)
T 1ycg_A 116 --------------S--HID------------FNYTIVKTGTSVSL-GKRSLTFIEAPMLHWPDSMFTYV--PEEALLL- 163 (398)
T ss_dssp --------------C--SCC------------CEEEECCTTCEEEC-SSCEEEEEECTTSSSTTCEEEEE--TTTTEEE-
T ss_pred --------------C--CCC------------cceEEeCCCCEEee-CCcEEEEEeCCCCCCCCcEEEEE--CCCcEEE-
Confidence 0 000 13567788899999 5777777754 79999998875 4678999
Q ss_pred cCCC
Q 005761 246 SGSN 249 (678)
Q Consensus 246 sgD~ 249 (678)
|||.
T Consensus 164 ~GD~ 167 (398)
T 1ycg_A 164 PNDA 167 (398)
T ss_dssp EETT
T ss_pred eccc
Confidence 9998
No 56
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=98.64 E-value=2.2e-08 Score=102.40 Aligned_cols=124 Identities=11% Similarity=0.079 Sum_probs=88.3
Q ss_pred CEEEEecCCCCCCCCceEEEEE-CCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCC
Q 005761 1 MKFTCLCQGGGFNFPPCHILNV-SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEP 79 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~-~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 79 (678)
|+++.++.. + +.+||+|+. ++..+|+|+|.. ..+. .
T Consensus 8 m~i~~i~~~-~--~n~~yli~~~~~~~vlID~G~~-~~i~---------------------------------------~ 44 (258)
T 2qed_A 8 MNLNSIPAF-Q--DNYIWVLTNDEGRCVIVDPGEA-APVL---------------------------------------K 44 (258)
T ss_dssp CEEEEEEET-T--TEEEEEEECTTSEEEEECCSCH-HHHH---------------------------------------H
T ss_pred cEEEEeccc-C--ceEEEEEEECCCcEEEEeCCCc-HHHH---------------------------------------H
Confidence 788888754 2 456999998 578999999943 1000 0
Q ss_pred cccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCC
Q 005761 80 WYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSG 157 (678)
Q Consensus 80 ~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~ 157 (678)
+.+ .... +|++||+||. ||+||++.|.+.++ ..+||+++.+. +
T Consensus 45 ~l~------~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~------------~--------------- 89 (258)
T 2qed_A 45 AIA------EHKW-MPEAIFLTHHHHDHVGGVKELLQHFP-QMTVYGPAETQ------------D--------------- 89 (258)
T ss_dssp HHH------HHTC-EEEEEECCSCCHHHHTTHHHHHHHCT-TCEEEECGGGG------------G---------------
T ss_pred HHH------HcCC-CCCEEEeCCCCccccCCHHHHHHHCC-CCEEEeccccc------------C---------------
Confidence 110 0112 7899999999 99999999987432 38999987541 0
Q ss_pred cccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEEe
Q 005761 158 PQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIIS 236 (678)
Q Consensus 158 ~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I~ 236 (678)
| + ....+.-++.+.+ |+.+++.+.. ||..|++.+.
T Consensus 90 ------------~-----------~------------------~~~~~~~g~~~~~-g~~~~~vi~tPGHt~g~~~~~-- 125 (258)
T 2qed_A 90 ------------K-----------G------------------ATHLVGDGDTIRV-LGEKFTLFATPGHTLGHVCYF-- 125 (258)
T ss_dssp ------------G-----------T------------------CSEECCTTCEEEE-TTEEEEEEECCSSSTTCEEEE--
T ss_pred ------------C-----------C------------------CcEEeCCCCEEEE-CCcEEEEEECCCCCCCCeEEE--
Confidence 0 0 1234566788888 5778887765 9999999998
Q ss_pred eCCeeEEEecCCC
Q 005761 237 GAKGNIAYISGSN 249 (678)
Q Consensus 237 ~~~~~I~Y~sgD~ 249 (678)
..+++| |||.
T Consensus 126 --~~~~lf-tGD~ 135 (258)
T 2qed_A 126 --SRPYLF-CGDT 135 (258)
T ss_dssp --ETTEEE-EETT
T ss_pred --cCCEEE-ECCC
Confidence 467999 9998
No 57
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=98.62 E-value=1.8e-08 Score=103.14 Aligned_cols=97 Identities=12% Similarity=-0.001 Sum_probs=69.5
Q ss_pred CCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhh
Q 005761 91 NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (678)
Q Consensus 91 d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (678)
+..+||+|++||. ||+||++.+.+.. -..+||+++.+.+..+.++
T Consensus 76 ~~~~i~~IilTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~~l~~~~-------------------------------- 122 (262)
T 3hnn_A 76 NLKKLDYVILGHFSPNRIPTFKALLELA-PQITFVCSLPAAGDLRAAF-------------------------------- 122 (262)
T ss_dssp CGGGEEEEECSSCCGGGHHHHHHHHHHC-TTCEEEECHHHHHHHHHHS--------------------------------
T ss_pred ChhhCCEEEECCCCcchhchHHHHHHHC-CCCEEEECHHHHHHHHHHh--------------------------------
Confidence 4568999999999 9999999998732 1689999999876432210
Q ss_pred chhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-C-CCcccEEEEEeeCCeeEEEec
Q 005761 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-G-LDIGACNWIISGAKGNIAYIS 246 (678)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-G-H~lGs~~~~I~~~~~~I~Y~s 246 (678)
+ ... .+++.++.++++++.++.+++++.+ | |..|+..+.+ +..+++| |
T Consensus 123 -------------~--~~~------------~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~--~~~~~lf-s 172 (262)
T 3hnn_A 123 -------------P--DDN------------LNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYD--VQTQILY-T 172 (262)
T ss_dssp -------------S--SSC------------CEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEE--TTTTEEE-E
T ss_pred -------------C--CCC------------CceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEe--CCCCEEE-E
Confidence 0 000 1467788899999942555555543 3 9999987765 4568999 9
Q ss_pred CCCC
Q 005761 247 GSNF 250 (678)
Q Consensus 247 gD~~ 250 (678)
||.+
T Consensus 173 GD~~ 176 (262)
T 3hnn_A 173 DKIF 176 (262)
T ss_dssp ETTT
T ss_pred eecC
Confidence 9983
No 58
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.61 E-value=3.6e-08 Score=107.45 Aligned_cols=127 Identities=17% Similarity=0.105 Sum_probs=92.9
Q ss_pred CceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCCC
Q 005761 15 PPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSF 94 (678)
Q Consensus 15 ~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 94 (678)
-+||||+.++..+|+|.|..... ..+.+++ ...++..+
T Consensus 52 yNsYLI~~~~~~vLIDtg~~~~~----------------------------------~~~l~~l--------~~~i~~~~ 89 (410)
T 4dik_A 52 YNAYLVKLNGANVLIDGWKGNYA----------------------------------KEFIDAL--------SKIVDPKE 89 (410)
T ss_dssp EEEEEEECSSCEEEECCCCGGGH----------------------------------HHHHHHH--------TTTSCGGG
T ss_pred EEEEEEEECCeEEEEeCCCcchH----------------------------------HHHHHHH--------HHhcCccc
Confidence 47999998899999999954110 0011011 12246778
Q ss_pred ccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchhh
Q 005761 95 IDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSA 172 (678)
Q Consensus 95 ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~ 172 (678)
||.|++||. ||+|+++.|.+.++-+.+||+++.++++.+...
T Consensus 90 IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~~~~------------------------------------ 133 (410)
T 4dik_A 90 ITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLLEGFY------------------------------------ 133 (410)
T ss_dssp CCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHHHHH------------------------------------
T ss_pred CCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHHhhc------------------------------------
Confidence 999999999 999999999987776889999998876543210
Q ss_pred hhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-C-CCcccEEEEEeeCCeeEEEecCCCC
Q 005761 173 LRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-G-LDIGACNWIISGAKGNIAYISGSNF 250 (678)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-G-H~lGs~~~~I~~~~~~I~Y~sgD~~ 250 (678)
+ . ..++.++-++++++ |+.+++++.+ | |..|+..+.. .+++| |||.+
T Consensus 134 ---------~--~--------------~~~~~v~dGd~l~l-G~~~L~~i~tPg~H~p~~~~~y~----~~iLF-sgD~f 182 (410)
T 4dik_A 134 ---------G--I--------------KDVTVVKDGEEREI-GGKKFKFVMTPWLHWPDTMVTYL----DGILF-SCDVG 182 (410)
T ss_dssp ---------C--C--------------CCEEECCTTCEEEE-TTEEEEEEECTTSSSTTCEEEEE----TTEEE-EETTT
T ss_pred ---------C--c--------------cceeEecCCCEEee-cceEEEEecCCCCCCCCCeeEEe----CCceE-ccccc
Confidence 0 0 13667888999999 6778877766 4 9999988774 37999 99984
No 59
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.55 E-value=7.6e-08 Score=104.97 Aligned_cols=96 Identities=11% Similarity=-0.067 Sum_probs=68.6
Q ss_pred CCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhh
Q 005761 91 NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (678)
Q Consensus 91 d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (678)
+..+||+|++||. ||+||++.|.+.. -..+||+++.+.+..+. ...
T Consensus 74 ~~~~i~~ii~TH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~~~~~----~~~--------------------------- 121 (414)
T 2q9u_A 74 PLDKIKYVVMNHAEGDHASSLKDHYHKF-TNATFVCTKKCQEHLKI----LYG--------------------------- 121 (414)
T ss_dssp CGGGCCEEECSCCSGGGTTTHHHHGGGS-TTCEEEECHHHHHHHHH----HHC---------------------------
T ss_pred CcccCCEEEeCCCCcchhcCHHHHHHHC-CCCEEEECHHHHHHHHH----HhC---------------------------
Confidence 4568999999999 9999999998732 26899999998764321 100
Q ss_pred chhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe--cCCCcccEEEEEeeCCeeEEEec
Q 005761 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS--SGLDIGACNWIISGAKGNIAYIS 246 (678)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~--sGH~lGs~~~~I~~~~~~I~Y~s 246 (678)
. .. ..+..++.++++++ |+.+++++. .||..|+..+.+ +..+++| |
T Consensus 122 -------------~---~~------------~~~~~~~~g~~~~l-g~~~~~~~~~p~gHt~~~~~~~~--~~~~~lf-~ 169 (414)
T 2q9u_A 122 -------------M---EK------------ATWLIVDDKYTLKI-GKRTLKFIPVPLLHWPDSTFTYC--PEDKILF-S 169 (414)
T ss_dssp -------------C---TT------------CCEEECCTTCCEEC-SSCEEEEEECTTSSSTTCEEEEE--TTTTEEE-E
T ss_pred -------------C---CC------------CeeEEeCCCCEEEE-CCeEEEEEeCCCCCCCCceEEEE--CCCeEEE-E
Confidence 0 00 13456777888998 465666554 479999987655 3568999 9
Q ss_pred CCCC
Q 005761 247 GSNF 250 (678)
Q Consensus 247 gD~~ 250 (678)
||.+
T Consensus 170 GD~~ 173 (414)
T 2q9u_A 170 NDGF 173 (414)
T ss_dssp ETTT
T ss_pred cccc
Confidence 9973
No 60
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.54 E-value=2.9e-08 Score=97.37 Aligned_cols=118 Identities=9% Similarity=-0.119 Sum_probs=82.5
Q ss_pred CCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCC
Q 005761 12 FNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWN 91 (678)
Q Consensus 12 ~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d 91 (678)
..+.+||+|+.++..+|+|||.....+ .... . .
T Consensus 21 ~~~~n~~li~~~~~~iliD~g~~~~~~---------------------------------------~~~l------~--~ 53 (201)
T 2p97_A 21 NIDFNGFAWIRPEGNILIDPVALSNHD---------------------------------------WKHL------E--S 53 (201)
T ss_dssp TEEEEEEEECCTTCCEEESCCCCCHHH---------------------------------------HHHH------H--H
T ss_pred CcceeEEEEEeCCeeEEEECCCCcHHH---------------------------------------HHHH------H--h
Confidence 346889999998889999999531110 0011 0 1
Q ss_pred CCCccEEEecCCCCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchh
Q 005761 92 VSFIDVVLISSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (678)
Q Consensus 92 ~~~ID~IlISH~dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ 171 (678)
..+|++|++||.||+|+++.+.+.+ ..+||+++.+.+..+
T Consensus 54 ~g~i~~ii~TH~DH~gg~~~~~~~~--~a~v~~~~~~~~~~~-------------------------------------- 93 (201)
T 2p97_A 54 LGGVVWIVLTNSDHVRSAKEIADQT--YTKIAGPVAEKENFP-------------------------------------- 93 (201)
T ss_dssp TTCCSEEECSSGGGCTTHHHHHHHS--CCEEEEEGGGTTSCS--------------------------------------
T ss_pred cCCCCEEEECCchhhhhHHHHHHhc--CCEEEEcHhHhhhhc--------------------------------------
Confidence 1279999999999999999998744 489999987643200
Q ss_pred hhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEeeCCeeEEEecCCC
Q 005761 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249 (678)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~~~~~~I~Y~sgD~ 249 (678)
. + ....+.-++.+ .+.+++...++||..|++.+.++ . +++| |||.
T Consensus 94 ----------~-------~----------~~~~~~~g~~~--~~~~~~~~~p~gHt~g~~~~~~~--~-~~lf-~GD~ 138 (201)
T 2p97_A 94 ----------I-------Y----------CDRWLSDGDEL--VPGLKVMELQGSKTPGELALLLE--E-TTLI-TGDL 138 (201)
T ss_dssp ----------S-------C----------CSEEECTTCBS--STTEEEEEECSSSSTTEEEEEET--T-TEEE-ECSS
T ss_pred ----------c-------c----------CceecCCCCEE--cceEEEEECCCCCCCCcEEEEEc--C-CEEE-ECcc
Confidence 0 0 01233334433 23688888889999999999887 3 8999 9998
No 61
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=98.54 E-value=6.2e-08 Score=99.15 Aligned_cols=127 Identities=13% Similarity=0.085 Sum_probs=88.1
Q ss_pred CEEEEecCCCCCCCCceEEEEEC--CEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccC
Q 005761 1 MKFTCLCQGGGFNFPPCHILNVS--GFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~~~--~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (678)
|+++++-.+ + +..||+|..+ +..+|+|+|.. ..+.
T Consensus 1 m~i~~i~~~-~--~n~~yli~~~~~~~~vlID~G~~-~~i~--------------------------------------- 37 (260)
T 1qh5_A 1 MKVEVLPAL-T--DNYMYLVIDDETKEAAIVDPVQP-QKVV--------------------------------------- 37 (260)
T ss_dssp CEEEEEEET-T--TEEEEEEEETTTTEEEEESCSSH-HHHH---------------------------------------
T ss_pred CEEEEEEec-C--ceEEEEEEECCCCEEEEEcCCCH-HHHH---------------------------------------
Confidence 788887653 2 4569999985 68999999932 1100
Q ss_pred CcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCC
Q 005761 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (678)
Q Consensus 79 p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~ 156 (678)
.+.+ .. . -.|++||+||. ||+||++.|.+.++ ..+||+++...
T Consensus 38 ~~l~----~~--g-~~i~~IllTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~--------------------------- 82 (260)
T 1qh5_A 38 DAAR----KH--G-VKLTTVLTTHHHWDHAGGNEKLVKLES-GLKVYGGDDRI--------------------------- 82 (260)
T ss_dssp HHHH----HH--T-CEEEEEECCCSSHHHHTTHHHHHHHST-TCEEEESCTTS---------------------------
T ss_pred HHHH----Hc--C-CCccEEEeCCCCccccCCHHHHHHHCC-CCEEEECcccC---------------------------
Confidence 0110 01 1 14899999999 99999999987431 58999975210
Q ss_pred CcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEE
Q 005761 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (678)
Q Consensus 157 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I 235 (678)
+ + ....+.-++.+.+ |+++++.+.. ||..|++.+.+
T Consensus 83 -------------~-----------~------------------~~~~~~~g~~~~~-g~~~~~vi~tPGHt~g~~~~~~ 119 (260)
T 1qh5_A 83 -------------G-----------A------------------LTHKITHLSTLQV-GSLNVKCLATPCHTSGHICYFV 119 (260)
T ss_dssp -------------T-----------T------------------CSEECCTTCEEEE-TTEEEEEEECCSSSTTCEEEEE
T ss_pred -------------C-----------C------------------CCEEeCCCCEEEE-CCEEEEEEECCCCCCCCEEEEE
Confidence 0 0 1234566788888 5778887654 99999999998
Q ss_pred -ee--CCeeEEEecCCC
Q 005761 236 -SG--AKGNIAYISGSN 249 (678)
Q Consensus 236 -~~--~~~~I~Y~sgD~ 249 (678)
+. +..+++| |||.
T Consensus 120 ~~~~~~~~~~lf-tGD~ 135 (260)
T 1qh5_A 120 SKPGGSEPPAVF-TGDT 135 (260)
T ss_dssp ECSSSSSCCEEE-EETT
T ss_pred eccCCCCCCEEE-EcCc
Confidence 54 4678999 9998
No 62
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=98.52 E-value=1.2e-08 Score=105.81 Aligned_cols=132 Identities=10% Similarity=-0.005 Sum_probs=88.2
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
+.+||+|+.++..||+|||..... .. ...+.. .. .. ...
T Consensus 31 ~~n~~li~~~~~~ilID~G~~~~~--------~~-----------------------~~~l~~---~l------~~-~~~ 69 (289)
T 4ad9_A 31 GTNTYLVGTGPRRILIDTGEPAIP--------EY-----------------------ISCLKQ---AL------TE-FNT 69 (289)
T ss_dssp CCEEEEECSSSSEEEECCCSTTCH--------HH-----------------------HHHHHH---HH------HH-TTC
T ss_pred ceEEEEEecCCceEEEeCCCCCCh--------HH-----------------------HHHHHH---HH------HH-cCC
Confidence 678999998889999999975210 00 000100 10 00 122
Q ss_pred CccEEEecCC--CCCChhhhhccccC--CCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhc
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEG--FSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~g--f~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l 169 (678)
.||+|++||. ||+||++.|.+... -..+||+...+... ..+.
T Consensus 70 ~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~--------------------------~~~~-------- 115 (289)
T 4ad9_A 70 AIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQR--------------------------EEII-------- 115 (289)
T ss_dssp CEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCSSCC--------------------------CCCB--------
T ss_pred CceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCCcch--------------------------hhhc--------
Confidence 7899999999 99999999988542 25678876433100 0000
Q ss_pred hhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEEeeCCeeEEEecCC
Q 005761 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGAKGNIAYISGS 248 (678)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I~~~~~~I~Y~sgD 248 (678)
. . .-..++.+..++++.+ |+.+++++.+ ||..|++++.+. ..+++| |||
T Consensus 116 ------------~----~----------~~~~~~~~~~g~~~~~-gg~~~~~~~~pGHt~~~~~~~~~--~~~~lf-tGD 165 (289)
T 4ad9_A 116 ------------G----N----------GEQQYVYLKDGDVIKT-EGATLRVLYTPGHTDDHMALLLE--EENAIF-SGD 165 (289)
T ss_dssp ------------T----T----------TTBCEEECCTTCEEEE-TTEEEEEEECCSSSTTCEEEEET--TTTEEE-EET
T ss_pred ------------c----C----------CCCceEEcCCCCEEEe-CCeEEEEEECCCCCCCCEEEEEc--CCCEEE-Eec
Confidence 0 0 0024678889999999 5789998877 999999999985 456999 999
Q ss_pred CC
Q 005761 249 NF 250 (678)
Q Consensus 249 ~~ 250 (678)
..
T Consensus 166 ~~ 167 (289)
T 4ad9_A 166 CI 167 (289)
T ss_dssp SS
T ss_pred cc
Confidence 73
No 63
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=98.50 E-value=6.1e-08 Score=98.84 Aligned_cols=84 Identities=14% Similarity=0.111 Sum_probs=64.5
Q ss_pred CccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhchh
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ 171 (678)
.|++||+||. ||+||++.|.+.+ ..+||+++.+.... +
T Consensus 46 ~i~~Il~TH~H~DH~gg~~~l~~~~--~~~v~~~~~~~~~~-------------------------------------~- 85 (254)
T 1xm8_A 46 NLTYILNTHHHYDHTGGNLELKDRY--GAKVIGSAMDKDRI-------------------------------------P- 85 (254)
T ss_dssp CCCEEECSSCCHHHHTTHHHHHHHH--CCEEEEEGGGGGGS-------------------------------------T-
T ss_pred CccEEEECCCCCcccccHHHHHHHc--CCeEEEchhhhhcC-------------------------------------C-
Confidence 6899999999 9999999998744 58999987653210 0
Q ss_pred hhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEe-cCCCcccEEEEEeeCCeeEEEecCCC
Q 005761 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDIGACNWIISGAKGNIAYISGSN 249 (678)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~-sGH~lGs~~~~I~~~~~~I~Y~sgD~ 249 (678)
+ ....+.-++.+.+ |+++++++. .||..|++.+.++ ..+++| |||.
T Consensus 86 ----------~------------------~~~~~~~g~~~~l-g~~~~~vi~tPGHt~g~~~~~~~--~~~~lf-tGD~ 132 (254)
T 1xm8_A 86 ----------G------------------IDMALKDGDKWMF-AGHEVHVMDTPGHTKGHISLYFP--GSRAIF-TGDT 132 (254)
T ss_dssp ----------T------------------EEEEECTTCEEEE-TTEEEEEEECCSSSSSCEEEEEG--GGTEEE-EETT
T ss_pred ----------C------------------CceeeCCCCEEEE-CCEEEEEEECCCCCCCcEEEEEC--CCCEEE-EcCc
Confidence 0 1235667888888 577888776 4999999999986 357999 9998
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.46 E-value=1.3e-07 Score=105.09 Aligned_cols=136 Identities=13% Similarity=0.104 Sum_probs=93.2
Q ss_pred CEEEEecCCCCCCCCceEEEE--ECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccC
Q 005761 1 MKFTCLCQGGGFNFPPCHILN--VSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (678)
Q Consensus 1 mkl~~Lg~~~~~~~~sc~lL~--~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (678)
|++..+-.+ ..+.+||+|. .++..+|+|||.+...+..
T Consensus 25 m~i~~~~~~--~~~~nsyli~~~~~~~~vlID~g~~~~~~~~-------------------------------------- 64 (466)
T 3r2u_A 25 MFFKQFYDK--HLSQASYLIGCQKTGEAMIIDPIRDLSSYIR-------------------------------------- 64 (466)
T ss_dssp EEEEEEEET--TTTEEEEEEEETTTCEEEEESCCSCCHHHHH--------------------------------------
T ss_pred eEEEEEecC--CccceEEEEEeCCCCEEEEEcCCCCHHHHHH--------------------------------------
Confidence 455444322 3367899995 4678999999976332110
Q ss_pred CcccccccccCCCCCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCC
Q 005761 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (678)
Q Consensus 79 p~~~~~~~~~~~d~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~ 156 (678)
..+ . .-.+|++||+||. ||++|++.|.+.+ ..+||+++.+.+.
T Consensus 65 -~l~------~-~g~~i~~Il~TH~H~DH~gg~~~l~~~~--~a~v~~~~~~~~~------------------------- 109 (466)
T 3r2u_A 65 -VAD------E-EGLTITHAAETHIHADFASGIRDVAIKL--NANIYVSGESDDT------------------------- 109 (466)
T ss_dssp -HHH------H-HTCEEEEEECSSCCSSSCCCHHHHHHHH--CCEEEEECCSCTT-------------------------
T ss_pred -HHH------H-CCCeeeEEEECCCChhhhccHHHHHHhh--CCeEEECcchhhh-------------------------
Confidence 000 0 0125999999999 9999999998844 6899999863210
Q ss_pred CcccchhhhhhhchhhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEec-CCCcccEEEEE
Q 005761 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (678)
Q Consensus 157 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~s-GH~lGs~~~~I 235 (678)
|. . .+.+ .....+.-++++.+ |+++++++.. ||..|++.+.+
T Consensus 110 ---~~--------------------~----~~~~---------~~~~~~~~g~~l~~-g~~~l~vi~tPGHT~g~~~~~~ 152 (466)
T 3r2u_A 110 ---LG--------------------Y----KNMP---------NHTHFVQHNDDIYV-GNIKLKVLHTPGHTPESISFLL 152 (466)
T ss_dssp ---TS--------------------C----CSCC---------TTCEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEE
T ss_pred ---hc--------------------c----ccCC---------CCCEEeCCCCEEEE-CCEEEEEEECCCCCCCCEEEEE
Confidence 00 0 0000 13567888999999 6888888864 89999999999
Q ss_pred ee-----CCeeEEEecCCC
Q 005761 236 SG-----AKGNIAYISGSN 249 (678)
Q Consensus 236 ~~-----~~~~I~Y~sgD~ 249 (678)
.. ++.+++| |||+
T Consensus 153 ~~~~~~~~~~~~lf-tGD~ 170 (466)
T 3r2u_A 153 TDEGAGAQVPMGLF-SGDF 170 (466)
T ss_dssp ECGGGTCCSCCEEE-EETT
T ss_pred cCCCccCCCceEEE-ECCc
Confidence 75 3456999 9998
No 65
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.39 E-value=1.5e-07 Score=96.32 Aligned_cols=132 Identities=8% Similarity=-0.022 Sum_probs=85.4
Q ss_pred CCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCC
Q 005761 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (678)
Q Consensus 13 ~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~ 92 (678)
.+.+||+|+.++..||+|||..... . ..+. ...+ ..--
T Consensus 66 ~~~n~~li~~~~~~iLID~G~~~~~---------~------------------------~~l~---~~l~------~~~g 103 (265)
T 2y8b_A 66 YSSNGLIVRDADELLLIDTAWGAKN---------T------------------------VALL---AEIE------KQIG 103 (265)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHH---------H------------------------HHHH---HHHH------HHTC
T ss_pred ccceEEEEEECCeEEEEeCCCCHHH---------H------------------------HHHH---HHHH------HhcC
Confidence 3578999999999999999986210 0 0000 0110 0001
Q ss_pred CCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCcccchhhhhhhch
Q 005761 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (678)
Q Consensus 93 ~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l~~~ll~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~ 170 (678)
.+||+|++||. ||+||++.+.+ .+.+||+++.+.+..+... . . +
T Consensus 104 ~~i~~VilTH~H~DH~gg~~~~~~---~~a~v~~~~~~~~~~~~~~-------~----~----------~---------- 149 (265)
T 2y8b_A 104 LPVTRSISTHFHDDRVGGVDVLRA---AGVATYTSPLTRQLAEAAG-------N----E----------V---------- 149 (265)
T ss_dssp SCEEEEECSSSSHHHHTTHHHHHH---TTCEEEECHHHHHHHHHTT-------C----C----------C----------
T ss_pred CCeEEEEeCCCChhhcCCHHHHhh---CCCeEEECHHHHHHHHhcc-------c----c----------c----------
Confidence 26999999998 99999998876 2689999999876532100 0 0 0
Q ss_pred hhhhhhcccCCCCCCCCCCchHHHHHHHHhcceEecCCCeEEeCCCeEEEEEecCCCcccEEEEEeeCCeeEEEecCCCC
Q 005761 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNF 250 (678)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~y~e~v~i~g~l~it~~~sGH~lGs~~~~I~~~~~~I~Y~sgD~~ 250 (678)
. . .+ +..+ .+-++.+.+ |++++.....||..|++.+.++ ..+++| |||..
T Consensus 150 -----------~----~-~~--------~~~~--~~~~~~~~~-g~~~v~~~~pGHt~g~~~~~~~--~~~~lf-~GD~~ 199 (265)
T 2y8b_A 150 -----------P----A-HS--------LKAL--SSSGDVVRF-GPVEVFYPGAAHSGDNLVVYVP--AVRVLF-GGCAV 199 (265)
T ss_dssp -----------C----S-EE--------CSSC--SSTTEEEEE-TTEEEEECCSSSSTTCCEEEET--TTTEEE-EETTS
T ss_pred -----------c----c-cc--------cccc--CCCCcEEee-cCEEEEecCCCCCCCCEEEEec--CCCEEE-Ecccc
Confidence 0 0 00 0000 133455666 5788876678999999999885 468999 99983
No 66
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.38 E-value=7.9e-08 Score=96.03 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=53.1
Q ss_pred CCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCC
Q 005761 12 FNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWN 91 (678)
Q Consensus 12 ~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d 91 (678)
..+.+||+|+.++..+|+|||...... ..+. .+. ....
T Consensus 30 ~~~~n~~li~~~~~~iliD~g~~~~~~---------------------------------~~~~---~~l------~~~g 67 (228)
T 1jjt_A 30 VVPKHGLVVLVNAEAYLIDTPFTAKDT---------------------------------EKLV---TWF------VERG 67 (228)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH---------------------------------HHHH---HHH------HTTT
T ss_pred cccceEEEEEECCcEEEEeCCCChhhH---------------------------------HHHH---HHH------HHcC
Confidence 345789999999999999999862100 0000 011 0011
Q ss_pred CCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHH
Q 005761 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARI 131 (678)
Q Consensus 92 ~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l 131 (678)
.+|++|++||. ||+||++.+.+ +..+||+++.+.++
T Consensus 68 -~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~ 105 (228)
T 1jjt_A 68 -YKIKGSISSHFHSDSTGGIEWLNS---RSIPTYASELTNEL 105 (228)
T ss_dssp -CEEEEEECSSSSHHHHTTHHHHHH---TTCCEEEEHHHHHH
T ss_pred -CCeeEEEeCCCChhhhccHHHHHh---CCCEEEEChHHHHH
Confidence 27899999999 99999999876 36899999998765
No 67
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=97.96 E-value=5.2e-06 Score=85.84 Aligned_cols=71 Identities=17% Similarity=0.080 Sum_probs=53.2
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
.++|++|+.++.+||+|||.....+ . .+. ...+++.
T Consensus 32 ~g~s~li~~~~~~iLiD~G~~~~~~----------~---------------------------~l~-------~~g~~~~ 67 (284)
T 2p4z_A 32 HGLSLLLKKGNKEIVVDTGQSENFI----------K---------------------------NCG-------LMGIDVG 67 (284)
T ss_dssp SSCEEEEEETTEEEEECCCSSTHHH----------H---------------------------HHH-------HTTCCGG
T ss_pred CEEEEEEEECCeEEEEeCCCCHHHH----------H---------------------------HHH-------HcCCChh
Confidence 5789999999999999999862100 0 000 1224567
Q ss_pred CccEEEecCC--CCCChhhhhccccCCCcEEEecHHHH
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAA 129 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~ 129 (678)
+||+|++||. ||++|++++.+.. -+.+||+++.+.
T Consensus 68 ~i~~v~lTH~H~DH~ggl~~~~~~~-~~~~v~~~~~~~ 104 (284)
T 2p4z_A 68 RIKKVVLTHGHYDHIGGLKGLLERN-PEVKIYTHKEIL 104 (284)
T ss_dssp GCCEEECCCSCHHHHTTHHHHHHHC-TTCEEEEEGGGG
T ss_pred hCCEEEECCCCchhhccHHHHHHHc-CCCceecCHHHH
Confidence 8999999999 9999999987622 268999999884
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=97.80 E-value=6e-06 Score=84.66 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=53.4
Q ss_pred CCCCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCC
Q 005761 12 FNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWN 91 (678)
Q Consensus 12 ~~~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d 91 (678)
.+..+||+|.-++..+|+|+|.+... ...+.+ +.+ . ..
T Consensus 72 ~~~~N~ylv~~~~~~ilIDtg~~~~~---------------------------------~~~l~~---~i~-----~-~~ 109 (270)
T 4eyb_A 72 AVASNGLIVRDGGRVLVVDTAWTDDQ---------------------------------TAQILN---WIK-----Q-EI 109 (270)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHH---------------------------------HHHHHH---HHH-----H-HT
T ss_pred ccceEEEEEEECCEEEEEeCCCCHHH---------------------------------HHHHHH---HHH-----H-hc
Confidence 44568999999999999999987321 000100 110 0 11
Q ss_pred CCCccEEEecCC--CCCChhhhhccccCCCcEEEecHHHHHH
Q 005761 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARI 131 (678)
Q Consensus 92 ~~~ID~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~~l 131 (678)
-..|++|++||. ||+||+.+|.+. ..+||+++.+.++
T Consensus 110 ~~~I~~Ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~ 148 (270)
T 4eyb_A 110 NLPVALAVVTHAHQDKMGGMDALHAA---GIATYANALSNQL 148 (270)
T ss_dssp CCCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEEHHHHHH
T ss_pred CCceEEEEeCCCChhhcCcHHHHHHC---CCeEEECHHHHHH
Confidence 246899999999 999999999772 5899999988664
No 69
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=97.65 E-value=9.7e-05 Score=85.20 Aligned_cols=78 Identities=9% Similarity=-0.042 Sum_probs=54.3
Q ss_pred CCceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCC
Q 005761 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (678)
Q Consensus 14 ~~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 93 (678)
..+||+|+.++..||+|+|...... ..+ .... ...+...
T Consensus 122 ~~N~ylI~~~~g~iLIDtG~~~~~a---------------------------------~~~---l~~i-----~~~~~~~ 160 (658)
T 2cfu_A 122 LANITFIRGDSGWIVVDTLTTPATA---------------------------------RAA---YELV-----SRELGER 160 (658)
T ss_dssp SSCEEEEECSSSEEEECCCSSHHHH---------------------------------HHH---HHHH-----HHHHCCC
T ss_pred CeEEEEEEECCEEEEEECCCCHHHH---------------------------------HHH---HHHH-----HhhCCCC
Confidence 4789999988889999999873210 000 0010 0112356
Q ss_pred CccEEEecCC--CCCChhhhhccc---cCCCcEEEecHHHHHHH
Q 005761 94 FIDVVLISSP--MGMLGLPFLTRM---EGFSAKIYITEAAARIG 132 (678)
Q Consensus 94 ~ID~IlISH~--dH~g~LP~l~~~---~gf~~~IY~T~pT~~l~ 132 (678)
.|++|++||. ||+||++.+.+. .....+||+++.+.+..
T Consensus 161 ~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~~~~~ 204 (658)
T 2cfu_A 161 PIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAA 204 (658)
T ss_dssp CEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHH
T ss_pred CceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhHHHHH
Confidence 8999999999 999999998752 12368999999987653
No 70
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=96.21 E-value=6.8e-05 Score=86.30 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=51.9
Q ss_pred CceEEEEECCEEEEEeCCCCCccccccCCCCCcccccccccCcccccccccCCCCccccccccCCcccccccccCCCCCC
Q 005761 15 PPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSF 94 (678)
Q Consensus 15 ~sc~lL~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 94 (678)
.+||+|+.++..||+|||...... .. + .... ...+....
T Consensus 133 ~N~~lI~~~~~~iLIDtG~~~~~a---------------------------~~------~---l~~i-----~~~~~~~~ 171 (668)
T 2yhe_A 133 ANMTIIEGDSGLVLIDTLTTAETA---------------------------RA------A---LDLY-----FQHRPKKP 171 (668)
Confidence 579999988889999999873210 00 0 0011 01123467
Q ss_pred ccEEEecCC--CCCChhhhhccc---cCCCcEEEecHHHHH
Q 005761 95 IDVVLISSP--MGMLGLPFLTRM---EGFSAKIYITEAAAR 130 (678)
Q Consensus 95 ID~IlISH~--dH~g~LP~l~~~---~gf~~~IY~T~pT~~ 130 (678)
|++|++||. ||+||++.+.+. ..+..+||+++.+.+
T Consensus 172 I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~e 212 (668)
T 2yhe_A 172 IVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFME 212 (668)
Confidence 999999999 999999999762 124689999998743
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=96.60 E-value=0.00095 Score=68.09 Aligned_cols=29 Identities=28% Similarity=0.339 Sum_probs=25.8
Q ss_pred cEEEecCC--CCCChhhhhccccCCCcEEEecHHHH
Q 005761 96 DVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAA 129 (678)
Q Consensus 96 D~IlISH~--dH~g~LP~l~~~~gf~~~IY~T~pT~ 129 (678)
|+|++||. ||+||++.+ .+.+||+.+...
T Consensus 63 ~~IvlTH~H~DH~ggl~~l-----~~~~v~~~~~~~ 93 (267)
T 3h3e_A 63 KDVLISHGHYDHAGGLLYL-----SGKRVWLRKEAL 93 (267)
T ss_dssp SEEECSCSCHHHHGGGGGC-----CSCEEEEEGGGG
T ss_pred CEEEECCCChhhhCCHHHh-----cCCEEEECHHHH
Confidence 99999999 999999998 468999988663
No 72
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=67.65 E-value=4.6 Score=40.13 Aligned_cols=52 Identities=8% Similarity=-0.070 Sum_probs=40.5
Q ss_pred ccCCCHhhHHHHHHhhCCCEEEEecCCccc-----ccccc----cCCc--eEeecCCCcEEEe
Q 005761 485 LSGKKLQKVQPLLKILQPKLVLFPEEWRTH-----VSFSD----VTSF--SVSHYSENETIHI 536 (678)
Q Consensus 485 s~had~~~l~~li~~~~P~~vilvHg~~~~-----~~~l~----~~~~--~v~~p~~ge~v~i 536 (678)
..|++..+..++++.++|+++|++|-..-. .+.++ +.++ ++..|+.||++++
T Consensus 202 ~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 202 SIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNNIESHVAVPEDGETITL 264 (264)
T ss_dssp CSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHTTCTTTEECCCTTCEEEC
T ss_pred CcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHHcCCCCcEEecCCCCEEeC
Confidence 579999999999999999999999976421 22222 3454 7999999999875
No 73
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=64.08 E-value=6.3 Score=41.22 Aligned_cols=59 Identities=10% Similarity=-0.069 Sum_probs=45.6
Q ss_pred ccCCCHhhHHHHHHhhCCCEEEEecCCccc-----ccccc---c-------CCceEeecCCCcEEEeCCCCcee
Q 005761 485 LSGKKLQKVQPLLKILQPKLVLFPEEWRTH-----VSFSD---V-------TSFSVSHYSENETIHIPSLKESA 543 (678)
Q Consensus 485 s~had~~~l~~li~~~~P~~vilvHg~~~~-----~~~l~---~-------~~~~v~~p~~ge~v~i~~~~~~~ 543 (678)
..|++..+..++++.++|+.+|++|...-. .+.+. + .+.+++.++.|++++++..++.+
T Consensus 257 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~~d~~~~ 330 (360)
T 2wyl_A 257 TDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNF 330 (360)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTTTCC
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEecCCCCce
Confidence 579999999999999999999999976421 11221 1 14688999999999999877643
No 74
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=63.92 E-value=6.3 Score=41.60 Aligned_cols=59 Identities=10% Similarity=-0.063 Sum_probs=45.3
Q ss_pred ccCCCHhhHHHHHHhhCCCEEEEecCCccc-----ccccc---c---C----CceEeecCCCcEEEeCCCCcee
Q 005761 485 LSGKKLQKVQPLLKILQPKLVLFPEEWRTH-----VSFSD---V---T----SFSVSHYSENETIHIPSLKESA 543 (678)
Q Consensus 485 s~had~~~l~~li~~~~P~~vilvHg~~~~-----~~~l~---~---~----~~~v~~p~~ge~v~i~~~~~~~ 543 (678)
..|++..+..++++.++|+.+|+.|..... .+.+. + . +.+++.++.|+++++|..++.+
T Consensus 282 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~d~~~~ 355 (379)
T 3bv6_A 282 TDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYPTDKGRM 355 (379)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTTTCC
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEecCCCCce
Confidence 579999999999999999999999976421 11221 1 1 4678899999999999876533
No 75
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=38.31 E-value=67 Score=31.23 Aligned_cols=74 Identities=11% Similarity=0.109 Sum_probs=48.0
Q ss_pred cCCCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcchhcccCCCCceeeEEEEeecccCCCHhhHHHHHHhhCC
Q 005761 423 NWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQP 502 (678)
Q Consensus 423 ~~~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~~~~tl~~~~~v~~~v~~~~fs~had~~~l~~li~~~~P 502 (678)
...+..++|++.-..........+.. ..-..+|++..|..+. .+-..|++..+..++++.++|
T Consensus 153 ~~~~~~i~~~GDt~~~~~~~~~~l~~---~~~Dlli~e~t~~~~~--------------~~~~~H~~~~~a~~~~~~~~~ 215 (258)
T 3g1p_A 153 ETAHSRVAWLSDTAGLPEKTLKFLRN---NQPQVMVMDCSHPPRA--------------DAPRNHCDLNTVLALNQVIRS 215 (258)
T ss_dssp ECSSCEEEEECSCSSCCHHHHHHHHH---TCCSEEEEECCBSSCS--------------SCCSSSCBHHHHHHHHHHHCC
T ss_pred EeCCcEEEEECCCCCCCHHHHHHHHh---CCCCEEEEeCCCCCcc--------------ccCCCCCCHHHHHHHHHHcCC
Confidence 44566888888754433323333321 2235667765554321 123589999999999999999
Q ss_pred CEEEEecCCcc
Q 005761 503 KLVLFPEEWRT 513 (678)
Q Consensus 503 ~~vilvHg~~~ 513 (678)
+++++.|=..+
T Consensus 216 k~lil~H~s~~ 226 (258)
T 3g1p_A 216 PRVILTHISHQ 226 (258)
T ss_dssp SCEEEESCCHH
T ss_pred CEEEEECccCc
Confidence 99999996543
No 76
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=29.51 E-value=51 Score=32.18 Aligned_cols=52 Identities=8% Similarity=-0.010 Sum_probs=39.0
Q ss_pred ccCCCHhhHHHHHHhhCCCEEEEecCCcccc---cccc----c--CCceEeecCCCcEEEe
Q 005761 485 LSGKKLQKVQPLLKILQPKLVLFPEEWRTHV---SFSD----V--TSFSVSHYSENETIHI 536 (678)
Q Consensus 485 s~had~~~l~~li~~~~P~~vilvHg~~~~~---~~l~----~--~~~~v~~p~~ge~v~i 536 (678)
..|+...++.+++++++++++++.|=..... ..+. + .+.+|..+..|++++|
T Consensus 220 ~~H~t~~~a~~~~~~~~~~~lvl~H~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 220 KNHAAIDEVMESVKAAGVKKVILYHISTRYIRQLKSVIKKYREEMPDVEILYMDPRKVFEM 280 (280)
T ss_dssp -CCCBHHHHHHHHHHHTCCEEEEESCCGGGHHHHHHHHHHHHHHCTTSEEEECCTTSCEEC
T ss_pred cCCCCHHHHHHHHHHcCCCEEEEEeecCcCcchHHHHHHHHHHhCCCceEEEeCCCceeeC
Confidence 5799999999999999999999999766332 1111 1 2568888888888764
No 77
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=23.67 E-value=83 Score=31.28 Aligned_cols=54 Identities=13% Similarity=0.024 Sum_probs=38.4
Q ss_pred cccCCCHhhHHHHHHhhCCCEEEEecCCcccc-cccc-cCCceEeecCCCcEEEeC
Q 005761 484 FLSGKKLQKVQPLLKILQPKLVLFPEEWRTHV-SFSD-VTSFSVSHYSENETIHIP 537 (678)
Q Consensus 484 fs~had~~~l~~li~~~~P~~vilvHg~~~~~-~~l~-~~~~~v~~p~~ge~v~i~ 537 (678)
-..|++..+..+++++++|+++++.|=....- ..++ ...-.+....-|.+|++|
T Consensus 237 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~~~~~v~~a~DG~~i~l~ 292 (293)
T 3md7_A 237 HPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYETVMRETPHHVEPGYDGLRFEVA 292 (293)
T ss_dssp BTTBCCHHHHHHHHHHHCCSEEEEESBCTTCCHHHHHHHSCTTEEECCTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHhhcCCCcEEeeCCcEEEec
Confidence 35799999999999999999999999665421 1111 123356666677777775
No 78
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=23.47 E-value=77 Score=31.76 Aligned_cols=100 Identities=12% Similarity=0.007 Sum_probs=59.6
Q ss_pred CCCEEEEecCCCCCCchHHHHHHHHcCCCCCcEEEccCcchhcccCCCCceeeEEEEeecccCCCHhhHHHHHHhhCCCE
Q 005761 425 QEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKL 504 (678)
Q Consensus 425 ~~P~Vv~as~gmL~~G~s~~~l~~~~~d~~N~Iilt~gy~~~~tl~~~~~v~~~v~~~~fs~had~~~l~~li~~~~P~~ 504 (678)
.+.+|++++.-.. ...+ ..++.+ -..+|++..|..... . .-.-..|+...+..++++++++++
T Consensus 202 ~g~~i~~sgDt~~----~~~~-~~~~~~-~D~li~E~t~~~~~~-----~------~a~~~~H~t~~~a~~~a~~~~~~~ 264 (320)
T 1y44_A 202 KGRSVVFSGDTRV----SDKL-KELARD-CDVMVHEATFAKEDR-----K------LAYDYYHSTTEQAAVTAKEARAKQ 264 (320)
T ss_dssp CCCEEEECCSCBC----CHHH-HHHTTT-CSEEEEECCBCTTCH-----H------HHHHTTCCBHHHHHHHHHHHTCSE
T ss_pred CCCEEEEeCCCCC----HHHH-HHHhCC-CCEEEEeccCCcchH-----h------HHhhcCCCCHHHHHHHHHHcCCCE
Confidence 4567888765322 2233 334433 245566555532110 0 012357999999999999999999
Q ss_pred EEEecCCccccc----ccc----cCCceEeecCCCcEEEeCCCCc
Q 005761 505 VLFPEEWRTHVS----FSD----VTSFSVSHYSENETIHIPSLKE 541 (678)
Q Consensus 505 vilvHg~~~~~~----~l~----~~~~~v~~p~~ge~v~i~~~~~ 541 (678)
+|+.|=...... .+. +....+..+.-|++++++....
T Consensus 265 lil~H~s~~~~~~~~~~~~~e~~~~~~~~~~a~dg~~~~l~~~~~ 309 (320)
T 1y44_A 265 LILTHISARYQGDASLELQKEAVDVFPNSVAAYDFLEVNVPRGKL 309 (320)
T ss_dssp EEEECBCTTSCTTHHHHHHHHHHHHCSSEEECCTTCEEECCCC--
T ss_pred EEEEeEcCCCCCcchHHHHHHHHHhCCCcEeccCCCEEEecchhh
Confidence 999997653221 121 1112578888999999986443
Done!