AmiGO: BLAST Results


BLAST match view associations BLAST with AT1G33360 AT1G33360 AT1G33360	protein from Arabidopsis thaliana	8.4e-175
BLAST match view associations BLAST with AT5G49840 AT5G49840 AT5G49840	protein from Arabidopsis thaliana	1.3e-154
BLAST match view associations BLAST with CLPX CLPX CLPX CLP protease regulatory subunit X	protein from Arabidopsis thaliana	1.8e-151
BLAST match view associations BLAST with SPO_1004 SPO_1004 SPO_1004 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Ruegeria pomeroyi DSS-3	3.5e-98
BLAST match view associations BLAST with SO_1795 SO_1795 SO_1795 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Shewanella oneidensis MR-1	9.4e-98
BLAST match view associations BLAST with CHY_0326 CHY_0326 CHY_0326 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Carboxydothermus hydrogenoformans Z-2901	3.2e-97
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Caulobacter crescentus CB15	5.9e-96
BLAST match view associations BLAST with clpX clpX clpX ClpX	protein from Escherichia coli K-12	1.4e-94
BLAST match view associations BLAST with CPS_3784 CPS_3784 CPS_3784 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Colwellia psychrerythraea 34H	6.1e-94
BLAST match view associations BLAST with CBU_0739 CBU_0739 CBU_0739 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Coxiella burnetii RSA 493	7.8e-94
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Vibrio cholerae O1 biovar El Tor str. N16961	2.1e-93
BLAST match view associations BLAST with VC_1921 VC_1921 VC_1921 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Vibrio cholerae O1 biovar El Tor	2.1e-93
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Mycobacterium tuberculosis	3.8e-93
BLAST match view associations BLAST with APH_0969 APH_0969 APH_0969 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Anaplasma phagocytophilum HZ	1.6e-92
BLAST match view associations BLAST with ECH_0900 ECH_0900 ECH_0900 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Ehrlichia chaffeensis str. Arkansas	3.9e-92
BLAST match view associations BLAST with GSU_1791 GSU_1791 GSU_1791 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Geobacter sulfurreducens PCA	8.9e-92
BLAST match view associations BLAST with BA_4704 BA_4704 BA_4704 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Bacillus anthracis str. Ames	1.1e-91
BLAST match view associations BLAST with Clpx Clpx Clpx caseinolytic peptidase X (E.coli)	protein from Mus musculus	1.2e-89
BLAST match view associations BLAST with Clpx Clpx Clpx ClpX caseinolytic peptidase X homolog (E. coli)	gene from Rattus norvegicus	1.5e-89
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Bos taurus	2.4e-89
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Canis lupus familiaris	2.4e-89
BLAST match view associations BLAST with CLPX CLPX CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	protein from Homo sapiens	2.4e-89
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Sus scrofa	2.4e-89
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Gallus gallus	3.0e-89
BLAST match view associations BLAST with NSE_0753 NSE_0753 NSE_0753 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Neorickettsia sennetsu str. Miyayama	2.0e-88
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Gallus gallus	2.7e-88
BLAST match view associations BLAST with clpxa clpxa clpxa ClpX caseinolytic peptidase X homolog a	gene_product from Danio rerio	2.4e-87
BLAST match view associations BLAST with CJE_0324 CJE_0324 CJE_0324 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Campylobacter jejuni RM1221	2.0e-86
BLAST match view associations BLAST with D2030.2 D2030.2 D2030.2	gene from Caenorhabditis elegans	3.2e-77
BLAST match view associations BLAST with MCX1 MCX1 MCX1 Mitochondrial matrix protein	gene from Saccharomyces cerevisiae	1.1e-71
BLAST match view associations BLAST with CG4538 CG4538 CG4538	protein from Drosophila melanogaster	1.4e-71
BLAST match view associations BLAST with K07A3.3 K07A3.3 K07A3.3	gene from Caenorhabditis elegans	3.3e-65
BLAST match view associations BLAST with hslU hslU hslU ATP-dependent protease ATPase subunit HslU	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.7e-34
BLAST match view associations BLAST with VC_2674 VC_2674 VC_2674 protease HslVU, ATPase subunit HslU	protein from Vibrio cholerae O1 biovar El Tor	1.7e-34
BLAST match view associations BLAST with SO_4163 SO_4163 SO_4163 heat shock protein HslVU, ATPase subunit HslU	protein from Shewanella oneidensis MR-1	7.9e-34
BLAST match view associations BLAST with CBU_2012 CBU_2012 CBU_2012 heat shock protein HslVU, ATPase subunit HslU	protein from Coxiella burnetii RSA 493	1.4e-33
BLAST match view associations BLAST with CHY_1790 CHY_1790 CHY_1790 heat shock protein HslVU, ATPase subunit HslU	protein from Carboxydothermus hydrogenoformans Z-2901	8.5e-29
BLAST match view associations BLAST with CJE_0764 CJE_0764 CJE_0764 heat shock protein HslVU, ATPase subunit HslU	protein from Campylobacter jejuni RM1221	1.5e-27
BLAST match view associations BLAST with hslU hslU hslU	gene from Escherichia coli K-12	5.4e-26
BLAST match view associations BLAST with SPO_3882 SPO_3882 SPO_3882 heat shock protein HslVU, ATPase subunit HslU	protein from Ruegeria pomeroyi DSS-3	1.5e-25
BLAST match view associations BLAST with CPS_4370 CPS_4370 CPS_4370 heat shock protein HslVU, ATPase subunit HslU	protein from Colwellia psychrerythraea 34H	2.2e-24
BLAST match view associations BLAST with ECH_0997 ECH_0997 ECH_0997 heat shock protein HslVU, ATPase subunit HslU	protein from Ehrlichia chaffeensis str. Arkansas	3.3e-24
BLAST match view associations BLAST with DDB_G0288593 DDB_G0288593 DDB_G0288593 ATP-dependent hsl protease ATP-binding subunit hslU	gene from Dictyostelium discoideum	1.1e-23
BLAST match view associations BLAST with NSE_0177 NSE_0177 NSE_0177 heat shock protein HslVU, ATPase subunit HslU	protein from Neorickettsia sennetsu str. Miyayama	1.5e-23
BLAST match view associations BLAST with hslU hslU hslU ATP-dependent protease ATPase subunit HslU	protein from Haemophilus influenzae Rd KW20	2.5e-23
BLAST match view associations BLAST with APH_1074 APH_1074 APH_1074 ATP-dependent Hsl protease, ATP-binding subunit HslU	protein from Anaplasma phagocytophilum HZ	1.3e-22
BLAST match view associations BLAST with CLPX CLPX CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	protein from Homo sapiens	5.0e-08
BLAST match view associations BLAST with CHY_2164 CHY_2164 CHY_2164 ATPase, AAA family	protein from Carboxydothermus hydrogenoformans Z-2901	2.1e-07
BLAST match view associations BLAST with I3LI39 I3LI39 I3LI39 Uncharacterized protein	protein from Sus scrofa	1.3e-06
BLAST match view associations BLAST with psmc4 psmc4 psmc4 proteasome (prosome, macropain) 26S subunit, ATPase, 4	gene_product from Danio rerio	4.5e-05
BLAST match view associations BLAST with psmC4 psmC4 psmC4 HIV TAT binding-protein-related	gene from Dictyostelium discoideum	9.0e-05
BLAST match view associations BLAST with katna1 katna1 katna1 katanin p60 (ATPase-containing) subunit A 1	gene_product from Danio rerio	0.00012
BLAST match view associations BLAST with RPT6A RPT6A RPT6A regulatory particle triple-A ATPase 6A	protein from Arabidopsis thaliana	0.00013
BLAST match view associations BLAST with AT5G20000 AT5G20000 AT5G20000	protein from Arabidopsis thaliana	0.00013
BLAST match view associations BLAST with psmC5 psmC5 psmC5 HIV TAT binding-protein-related	gene from Dictyostelium discoideum	0.00015
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Uncharacterized protein	protein from Sus scrofa	0.00017
BLAST match view associations BLAST with PFL1925w PFL1925w PFL1925w cell division protein FtsH, putative	gene from Plasmodium falciparum	0.00021
BLAST match view associations BLAST with PFL1925w PFL1925w PFL1925w Cell division protein FtsH, putative	protein from Plasmodium falciparum 3D7	0.00021
BLAST match view associations BLAST with SPAST SPAST SPAST Spastin	protein from Gallus gallus	0.00022
BLAST match view associations BLAST with SPATA5L1 SPATA5L1 SPATA5L1 Uncharacterized protein	protein from Gallus gallus	0.00022
BLAST match view associations BLAST with CJE_1085 CJE_1085 CJE_1085 cell division protein FtsH, putative	protein from Campylobacter jejuni RM1221	0.00023
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 26S protease regulatory subunit 6B	protein from Bos taurus	0.00026
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 26S protease regulatory subunit 6B	protein from Bos taurus	0.00026
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 Uncharacterized protein	protein from Canis lupus familiaris	0.00026
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 26S protease regulatory subunit 6B	protein from Homo sapiens	0.00026
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 26S protease regulatory subunit 6B	protein from Macaca fascicularis	0.00026
BLAST match view associations BLAST with Psmc4 Psmc4 Psmc4 proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein from Mus musculus	0.00026
BLAST match view associations BLAST with Psmc4 Psmc4 Psmc4 proteasome (prosome, macropain) 26S subunit, ATPase, 4	gene from Rattus norvegicus	0.00026
BLAST match view associations BLAST with AFG3L2 AFG3L2 AFG3L2 Uncharacterized protein	protein from Sus scrofa	0.00027
BLAST match view associations BLAST with SPAST SPAST SPAST Spastin	protein from Bos taurus	0.00027
BLAST match view associations BLAST with Spast Spast Spast spastin	gene from Rattus norvegicus	0.00028
BLAST match view associations BLAST with Spast Spast Spast Spastin	protein from Rattus norvegicus	0.00028
BLAST match view associations BLAST with RPT4 RPT4 RPT4	gene_product from Candida albicans	0.00035
BLAST match view associations BLAST with CG3326 CG3326 CG3326	protein from Drosophila melanogaster	0.00037
BLAST match view associations BLAST with SPAST SPAST SPAST Spastin	protein from Sus scrofa	0.00038
BLAST match view associations BLAST with nsf-1 nsf-1 nsf-1	gene from Caenorhabditis elegans	0.00041
BLAST match view associations BLAST with nsf-1 nsf-1 nsf-1 Vesicle-fusing ATPase	protein from Caenorhabditis elegans	0.00041
BLAST match view associations BLAST with spast spast spast spastin	gene_product from Danio rerio	0.00042
BLAST match view associations BLAST with RPT4 RPT4 RPT4 ATPase of the 19S regulatory particle of the 26S proteasome	gene from Saccharomyces cerevisiae	0.00047
BLAST match view associations BLAST with MGG_05193 MGG_05193 MGG_05193 Cell division control protein 48	protein from Magnaporthe oryzae 70-15	0.00053
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Canis lupus familiaris	0.00056
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Canis lupus familiaris	0.00056
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Uncharacterized protein	protein from Bos taurus	0.00056
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Uncharacterized protein	protein from Canis lupus familiaris	0.00056
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Katanin p60 ATPase-containing subunit A1	protein from Homo sapiens	0.00056
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Katanin p60 ATPase-containing subunit A1	protein from Macaca fascicularis	0.00056
BLAST match view associations BLAST with Katna1 Katna1 Katna1 katanin p60 (ATPase-containing) subunit A1	gene from Rattus norvegicus	0.00056
BLAST match view associations BLAST with F56F11.4 F56F11.4 F56F11.4	gene from Caenorhabditis elegans	0.00059
BLAST match view associations BLAST with PFL2345c PFL2345c PFL2345c tat-binding protein homolog	gene from Plasmodium falciparum	0.00060
BLAST match view associations BLAST with PFL2345c PFL2345c PFL2345c Tat-binding protein homolog	protein from Plasmodium falciparum 3D7	0.00060
BLAST match view associations BLAST with psmc5 psmc5 psmc5 26S protease regulatory subunit 8	protein from Xenopus laevis	0.00065
BLAST match view associations BLAST with CDC48 CDC48 CDC48 cell division cycle 48	protein from Arabidopsis thaliana	0.00067
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  005762
        (678 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2006942 - symbol:AT1G33360 species:3702 "Arabi...  1494  8.4e-175  2
TAIR|locus:2155446 - symbol:AT5G49840 species:3702 "Arabi...  1326  1.3e-154  2
TAIR|locus:2154257 - symbol:CLPX "CLP protease regulatory...  1478  1.8e-151  1
TIGR_CMR|SPO_1004 - symbol:SPO_1004 "ATP-dependent Clp pr...   975  3.5e-98   1
TIGR_CMR|SO_1795 - symbol:SO_1795 "ATP-dependent Clp prot...   971  9.4e-98   1
TIGR_CMR|CHY_0326 - symbol:CHY_0326 "ATP-dependent Clp pr...   966  3.2e-97   1
UNIPROTKB|P0CAU2 - symbol:clpX "ATP-dependent Clp proteas...   954  5.9e-96   1
UNIPROTKB|P0A6H1 - symbol:clpX "ClpX" species:83333 "Esch...   941  1.4e-94   1
TIGR_CMR|CPS_3784 - symbol:CPS_3784 "ATP-dependent Clp pr...   935  6.1e-94   1
TIGR_CMR|CBU_0739 - symbol:CBU_0739 "ATP-dependent Clp pr...   934  7.8e-94   1
UNIPROTKB|Q9KQS7 - symbol:clpX "ATP-dependent Clp proteas...   930  2.1e-93   1
TIGR_CMR|VC_1921 - symbol:VC_1921 "ATP-dependent Clp prot...   930  2.1e-93   1
UNIPROTKB|P0A528 - symbol:clpX "ATP-dependent Clp proteas...   908  3.8e-93   2
TIGR_CMR|APH_0969 - symbol:APH_0969 "ATP-dependent Clp pr...   903  1.6e-92   2
TIGR_CMR|ECH_0900 - symbol:ECH_0900 "ATP-dependent Clp pr...   918  3.9e-92   1
TIGR_CMR|GSU_1791 - symbol:GSU_1791 "ATP-dependent Clp pr...   893  8.9e-92   2
TIGR_CMR|BA_4704 - symbol:BA_4704 "ATP-dependent Clp prot...   896  1.1e-91   2
MGI|MGI:1346017 - symbol:Clpx "caseinolytic peptidase X (...   759  1.2e-89   2
RGD|1304883 - symbol:Clpx "ClpX caseinolytic peptidase X ...   762  1.5e-89   2
UNIPROTKB|Q5U2U0 - symbol:Clpx "ATP-dependent Clp proteas...   762  1.5e-89   2
UNIPROTKB|F1N155 - symbol:CLPX "Uncharacterized protein" ...   760  2.4e-89   2
UNIPROTKB|E2QSS3 - symbol:CLPX "Uncharacterized protein" ...   760  2.4e-89   2
UNIPROTKB|O76031 - symbol:CLPX "ATP-dependent Clp proteas...   760  2.4e-89   2
UNIPROTKB|F1SJL5 - symbol:CLPX "Uncharacterized protein" ...   760  2.4e-89   2
UNIPROTKB|F1NA92 - symbol:CLPX "Uncharacterized protein" ...   763  3.0e-89   2
TIGR_CMR|NSE_0753 - symbol:NSE_0753 "ATP-dependent Clp pr...   883  2.0e-88   1
UNIPROTKB|E1BX77 - symbol:CLPX "Uncharacterized protein" ...   754  2.7e-88   2
ZFIN|ZDB-GENE-040912-143 - symbol:clpx "ClpX caseinolytic...   743  2.4e-87   2
TIGR_CMR|CJE_0324 - symbol:CJE_0324 "ATP-dependent Clp pr...   864  2.0e-86   1
WB|WBGene00008412 - symbol:D2030.2 species:6239 "Caenorha...   663  3.2e-77   2
SGD|S000000431 - symbol:MCX1 "Mitochondrial matrix protei...   395  1.1e-71   3
FB|FBgn0038745 - symbol:CG4538 species:7227 "Drosophila m...   724  1.4e-71   1
WB|WBGene00019461 - symbol:K07A3.3 species:6239 "Caenorha...   562  3.3e-65   2
ASPGD|ASPL0000057717 - symbol:AN0349 species:162425 "Emer...   348  1.8e-57   3
UNIPROTKB|Q9KNQ7 - symbol:hslU "ATP-dependent protease AT...   162  1.7e-34   4
TIGR_CMR|VC_2674 - symbol:VC_2674 "protease HslVU, ATPase...   162  1.7e-34   4
TIGR_CMR|SO_4163 - symbol:SO_4163 "heat shock protein Hsl...   169  7.9e-34   4
TIGR_CMR|CBU_2012 - symbol:CBU_2012 "heat shock protein H...   182  1.4e-33   4
TIGR_CMR|CHY_1790 - symbol:CHY_1790 "heat shock protein H...   186  8.5e-29   3
TIGR_CMR|CJE_0764 - symbol:CJE_0764 "heat shock protein H...   177  1.5e-27   3
UNIPROTKB|P0A6H5 - symbol:hslU species:83333 "Escherichia...   170  5.4e-26   3
TIGR_CMR|SPO_3882 - symbol:SPO_3882 "heat shock protein H...   164  1.5e-25   3
TIGR_CMR|CPS_4370 - symbol:CPS_4370 "heat shock protein H...   165  2.2e-24   3
TIGR_CMR|ECH_0997 - symbol:ECH_0997 "heat shock protein H...   170  3.3e-24   3
DICTYBASE|DDB_G0288593 - symbol:DDB_G0288593 "ATP-depende...   160  1.1e-23   3
TIGR_CMR|NSE_0177 - symbol:NSE_0177 "heat shock protein H...   161  1.5e-23   3
UNIPROTKB|P43773 - symbol:hslU "ATP-dependent protease AT...   156  2.5e-23   3
TIGR_CMR|APH_1074 - symbol:APH_1074 "ATP-dependent Hsl pr...   161  1.3e-22   3
UNIPROTKB|H0YM48 - symbol:CLPX "ATP-dependent Clp proteas...   151  5.0e-08   1
TIGR_CMR|CHY_2164 - symbol:CHY_2164 "ATPase, AAA family" ...   150  2.1e-07   1
UNIPROTKB|I3LI39 - symbol:I3LI39 "Uncharacterized protein...   121  1.3e-06   1
ZFIN|ZDB-GENE-030131-5083 - symbol:psmc4 "proteasome (pro...   129  4.5e-05   1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula...   127  6.9e-05   1
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr...   126  9.0e-05   1
ZFIN|ZDB-GENE-050522-514 - symbol:katna1 "katanin p60 (AT...   126  0.00012   1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr...   124  0.00013   2
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi...   124  0.00013   2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr...   124  0.00015   1
UNIPROTKB|F1S7T6 - symbol:KATNA1 "Uncharacterized protein...   120  0.00017   1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis...   127  0.00021   1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein...   127  0.00021   1
UNIPROTKB|Q5ZK92 - symbol:SPAST "Spastin" species:9031 "G...   119  0.00022   3
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote...   126  0.00022   1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei...   124  0.00023   1
UNIPROTKB|F1MG70 - symbol:PSMC4 "26S protease regulatory ...   122  0.00026   1
UNIPROTKB|Q3T030 - symbol:PSMC4 "26S protease regulatory ...   122  0.00026   1
UNIPROTKB|E2RH48 - symbol:PSMC4 "Uncharacterized protein"...   122  0.00026   1
UNIPROTKB|P43686 - symbol:PSMC4 "26S protease regulatory ...   122  0.00026   1
UNIPROTKB|Q4R7L3 - symbol:PSMC4 "26S protease regulatory ...   122  0.00026   1
MGI|MGI:1346093 - symbol:Psmc4 "proteasome (prosome, macr...   122  0.00026   1
RGD|621102 - symbol:Psmc4 "proteasome (prosome, macropain...   122  0.00026   1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein...   124  0.00027   1
UNIPROTKB|A2VDN5 - symbol:SPAST "Spastin" species:9913 "B...   119  0.00027   3
RGD|1308494 - symbol:Spast "spastin" species:10116 "Rattu...   119  0.00028   3
UNIPROTKB|F1M9D2 - symbol:Spast "Spastin" species:10116 "...   119  0.00028   3
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer...   121  0.00030   1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica...   121  0.00035   1
FB|FBgn0031519 - symbol:CG3326 species:7227 "Drosophila m...   122  0.00037   1
UNIPROTKB|F1S3Z2 - symbol:SPAST "Spastin" species:9823 "S...   121  0.00038   3
POMBASE|SPAC1834.11c - symbol:sec18 "secretory pathway pr...   124  0.00039   1
WB|WBGene00003818 - symbol:nsf-1 species:6239 "Caenorhabd...   124  0.00041   1
UNIPROTKB|Q94392 - symbol:nsf-1 "Vesicle-fusing ATPase" s...   124  0.00041   1
ZFIN|ZDB-GENE-040426-2331 - symbol:spast "spastin" specie...   122  0.00042   1
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer...   123  0.00046   1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator...   120  0.00047   1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro...   123  0.00053   1
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s...   123  0.00056   1
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s...   123  0.00056   1
UNIPROTKB|E1BH39 - symbol:KATNA1 "Uncharacterized protein...   120  0.00056   1
UNIPROTKB|E2R3K3 - symbol:KATNA1 "Uncharacterized protein...   120  0.00056   1
UNIPROTKB|O75449 - symbol:KATNA1 "Katanin p60 ATPase-cont...   120  0.00056   1
UNIPROTKB|Q4R407 - symbol:KATNA1 "Katanin p60 ATPase-cont...   120  0.00056   1
RGD|1303062 - symbol:Katna1 "katanin p60 (ATPase-containi...   120  0.00056   1
UNIPROTKB|F1LZ09 - symbol:F1LZ09 "Uncharacterized protein...   122  0.00058   2
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh...   119  0.00059   1
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin...   119  0.00060   1
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h...   119  0.00060   1
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT...   122  0.00064   1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ...   119  0.00065   1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48...   122  0.00067   1

WARNING:  Descriptions of 23 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2006942 [details] [associations]
            symbol:AT1G33360 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0006457 "protein folding" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006457 GO:GO:0006508
            GO:GO:0017111 GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:BT015363
            EMBL:BT015893 IPI:IPI00536875 RefSeq:NP_564423.3 UniGene:At.39953
            ProteinModelPortal:Q66GN9 SMR:Q66GN9 STRING:Q66GN9 PaxDb:Q66GN9
            PRIDE:Q66GN9 EnsemblPlants:AT1G33360.1 GeneID:840230
            KEGG:ath:AT1G33360 TAIR:At1g33360 InParanoid:Q66GN9 OMA:KEICKWL
            PhylomeDB:Q66GN9 ProtClustDB:CLSN2690007 Genevestigator:Q66GN9
            Uniprot:Q66GN9
        Length = 656

 Score = 1494 (531.0 bits), Expect = 8.4e-175, Sum P(2) = 8.4e-175
 Identities = 301/389 (77%), Positives = 326/389 (83%)

Query:   260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
             D PTPKEICK LDKFVIGQ +AKKVLSVAVYNHYKRIYH ++KKGS A+P     +D+DD
Sbjct:   248 DFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQP-----IDDDD 302

Query:   320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
             NVEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KLL
Sbjct:   303 NVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLL 362

Query:   380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
               AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KG
Sbjct:   363 TVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKG 422

Query:   440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTDAA 498
             ARKHPRGD IQ+DTKDILFICGGAFVDLEKTI +RRQDSSIGFGAPVRANM  +GVT  A
Sbjct:   423 ARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGA 482

Query:   499 XXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
                         DL AYGLIPEFVGRFPILVSL+ALTEDQL++VL EPKNALGKQYK+LF
Sbjct:   483 ITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLF 542

Query:   559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTXXXXXXXXX 618
             SMNNVKLHFTEKAL +I+K+A  KNTGARGLRA+LESILTEAM+EIPD K          
Sbjct:   543 SMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVI 602

Query:   619 XXXXXXXXXXXPGCGGKILRGEGALERYL 647
                         GC  KILRG+GA ERYL
Sbjct:   603 VDEESTSSEASRGCTAKILRGDGAFERYL 631

 Score = 226 (84.6 bits), Expect = 8.4e-175, Sum P(2) = 8.4e-175
 Identities = 73/210 (34%), Positives = 97/210 (46%)

Query:     1 MSGIWRWKRQLSDIA--SSSMLPSSRTRFTPLVAGPVNYLSNN-SIGRAAGGHRRQPFFI 57
             MSG+WR  R L  +A  + S+ P S      L + P   +       +  GG     F +
Sbjct:     1 MSGLWRL-RNLKSLALHARSISPVSNLYSLELGSCPRRRIQERFKSEQGGGGGGGDDFPV 59

Query:    58 GIQERYKWDHGGDTFRKIRAEANCPRCSKHMDLLFSN---PSN--LSPPVPAPAVDGSG- 111
              +           T RK+RAE NCPRCSK MDLLFSN   PS+  L  P  + +  G+G 
Sbjct:    60 PV-----------TRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDSDS-SGAGD 107

Query:   112 --GYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-------SISAXXXXXXXXXKRXXXX 162
                +Q+VN CP CK+AY F P  ++PLQG+F+EI       + +          K+    
Sbjct:   108 KTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKSTRKQQQHS 167

Query:   163 XX-------XXXXXXXFWDTLRSYGGELPP 185
                             FWDTLRSYG E PP
Sbjct:   168 KDPNQGFNYRNKLRSSFWDTLRSYGAE-PP 196


>TAIR|locus:2155446 [details] [associations]
            symbol:AT5G49840 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
            EMBL:CP002688 GO:GO:0006457 GO:GO:0006508 GO:GO:0017111
            GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 IPI:IPI00522644
            RefSeq:NP_568714.4 UniGene:At.49150 ProteinModelPortal:F4K7F6
            SMR:F4K7F6 PRIDE:F4K7F6 EnsemblPlants:AT5G49840.1 GeneID:835047
            KEGG:ath:AT5G49840 OMA:ASESYNI Uniprot:F4K7F6
        Length = 608

 Score = 1326 (471.8 bits), Expect = 1.3e-154, Sum P(2) = 1.3e-154
 Identities = 269/392 (68%), Positives = 313/392 (79%)

Query:   261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD-NDD 319
             LPTPKEIC+GLD+FVIGQEKAKKVLSVAVYNHYKRIYHA+ KKGS +E       D N D
Sbjct:   197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNID 256

Query:   320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
             +VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESILYKL 
Sbjct:   257 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLY 316

Query:   380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP--E 437
              +A  NVE AQ+G+VYIDEVDK+T K+ S N  RDVSGEGVQQ+LLK+LEGT+V+VP  E
Sbjct:   317 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPE 376

Query:   438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTD 496
             KG R+ PRGDSIQMDTKDILFICGGAF+DLEKT+SER+ D+SIGFGA VR NM  +G++ 
Sbjct:   377 KGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSS 436

Query:   497 AAXXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
             AA            DL+AYGLIPEFVGR PILVSL+AL EDQLV+VLTEPK+ALGKQYK+
Sbjct:   437 AAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKK 496

Query:   557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD-VKTXXXXXX 615
             LF MNNV+L FTE A R+IA+KA +KNTGARGLR+ILESILTEAM+E+PD +        
Sbjct:   497 LFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIK 556

Query:   616 XXXXXXXXXXXXXXPGCGGKILRGEGALERYL 647
                           PGCG KIL+G+  L++++
Sbjct:   557 AVLVDEEAVGSVGSPGCGAKILKGDNVLQQFV 588

 Score = 203 (76.5 bits), Expect = 1.3e-154, Sum P(2) = 1.3e-154
 Identities = 39/77 (50%), Positives = 53/77 (68%)

Query:    68 GGDTFRKIRAEANCPRCSKHMDLLFSN-PSNLSPPVPAPAVDGSGGYQAVNICPNCKSAY 126
             GGD +  IR++ NCPRCS  M ++FSN P +L+   P       G YQAVN C  CK+A+
Sbjct:    70 GGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREP-------GIYQAVNFCSQCKTAF 122

Query:   127 YFRPHRIAPLQGSFVEI 143
             YFRP +++PLQGSF+E+
Sbjct:   123 YFRPFKLSPLQGSFIEL 139


>TAIR|locus:2154257 [details] [associations]
            symbol:CLPX "CLP protease regulatory subunit X"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006457 "protein
            folding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0005759
            "mitochondrial matrix" evidence=IDA] [GO:0015996 "chlorophyll
            catabolic process" evidence=RCA] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0006457
            GO:GO:0006508 GO:GO:0017111 EMBL:AB013388 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03544
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 HSSP:O25926
            ProtClustDB:CLSN2690007 EMBL:AY035103 EMBL:AY142561 IPI:IPI00536799
            RefSeq:NP_568792.1 UniGene:At.21717 ProteinModelPortal:Q9FK07
            SMR:Q9FK07 STRING:Q9FK07 PRIDE:Q9FK07 EnsemblPlants:AT5G53350.1
            GeneID:835416 KEGG:ath:AT5G53350 TAIR:At5g53350 InParanoid:Q9FK07
            OMA:NCRSAYF PhylomeDB:Q9FK07 ArrayExpress:Q9FK07
            Genevestigator:Q9FK07 Uniprot:Q9FK07
        Length = 579

 Score = 1478 (525.3 bits), Expect = 1.8e-151, P = 1.8e-151
 Identities = 299/390 (76%), Positives = 329/390 (84%)

Query:   260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH-ANLKKGSGAEPKTAAAVDND 318
             D PTPKEICKGL+KFVIGQE+AKKVLSVAVYNHYKRIYH ++ K+ +G    TAA   +D
Sbjct:   157 DFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADD 216

Query:   319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
             D VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKL
Sbjct:   217 DMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKL 276

Query:   379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             L  A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK
Sbjct:   277 LTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 336

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG-VTDA 497
             GARKHPRGD+IQ+DTKDILFICGGAFVD+EKTISERR DSSIGFGAPVRANMRAG VT+A
Sbjct:   337 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNA 396

Query:   498 AXXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
             A            DLIAYGLIPEFVGRFP+LVSL+ALTE+QL++VLTEPKNALGKQYK++
Sbjct:   397 AVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKM 456

Query:   558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTXXXXXXXX 617
             + MN+VKLHFTE ALR+IA+KA  KNTGARGLRA+LESIL ++MYEIPD  T        
Sbjct:   457 YQMNSVKLHFTESALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAV 516

Query:   618 XXXXXXXXXXXXPGCGGKILRGEGALERYL 647
                          G G KILRG+GAL RYL
Sbjct:   517 VVDEEAVEGEGRRGSGAKILRGKGALARYL 546


>TIGR_CMR|SPO_1004 [details] [associations]
            symbol:SPO_1004 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
            "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
            evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
            HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_166256.1
            HSSP:P0A6H1 ProteinModelPortal:Q5LUP9 SMR:Q5LUP9 GeneID:3195507
            KEGG:sil:SPO1004 PATRIC:23375301 OMA:YVIGQQQ Uniprot:Q5LUP9
        Length = 424

 Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
 Identities = 197/349 (56%), Positives = 264/349 (75%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
             + +PTP++IC  LD +VIGQ  AK+VLSVAV+NHYKR+ HA  K GS             
Sbjct:    63 DGVPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-KAGS------------- 108

Query:   319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
              ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct:   109 -DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 167

Query:   379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             L  +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct:   168 LQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQ 227

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
             G RKHP+ + +Q+DT +ILFICGGAF  L+K I++R + S++GFGA VRA+   GV +  
Sbjct:   228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERGVGEL- 286

Query:   499 XXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
                         DL+ +GLIPEFVGR P+L +L  L ED LV +LT+PKNAL KQY+RLF
Sbjct:   287 -----FTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLF 341

Query:   559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 607
              + + +L FT+ AL+ IAK+A  + TGARGLR+I+E IL + M+++P +
Sbjct:   342 ELEDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDLPSM 390


>TIGR_CMR|SO_1795 [details] [associations]
            symbol:SO_1795 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:211586 "Shewanella oneidensis MR-1"
            [GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
            evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            GO:GO:0046872 GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_717404.1
            ProteinModelPortal:Q8EG18 SMR:Q8EG18 PRIDE:Q8EG18 GeneID:1169568
            KEGG:son:SO_1795 PATRIC:23523213 OMA:MEMRESA Uniprot:Q8EG18
        Length = 426

 Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
 Identities = 201/350 (57%), Positives = 256/350 (73%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
             + LPTP E+   LD +VIGQ++AKKVLSVAVYNHYKR     LK  S   PK        
Sbjct:    63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKR-----LKNSS---PK-------- 106

Query:   319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
             D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct:   107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166

Query:   379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+  VP +
Sbjct:   167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
             G RKHP+ + +Q+DT  ILFICGGAF  LEK I +R    S IGFGA V+     G  D 
Sbjct:   227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281

Query:   498 AXXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
             A            DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY  L
Sbjct:   282 ATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNAL 341

Query:   558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 607
             F M  V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP +
Sbjct:   342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSI 391


>TIGR_CMR|CHY_0326 [details] [associations]
            symbol:CHY_0326 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:246194 "Carboxydothermus hydrogenoformans
            Z-2901" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368
            "endopeptidase Clp complex" evidence=ISS] [GO:0051082 "unfolded
            protein binding" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
            GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_359189.1
            ProteinModelPortal:Q3AF95 SMR:Q3AF95 STRING:Q3AF95 GeneID:3726618
            KEGG:chy:CHY_0326 PATRIC:21273823
            BioCyc:CHYD246194:GJCN-327-MONOMER Uniprot:Q3AF95
        Length = 418

 Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
 Identities = 203/350 (58%), Positives = 258/350 (73%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
             E+LP P+EI   LD++VIGQE+AKKVL+VAVYNHYKRI   NL    G +          
Sbjct:    55 EELPKPQEIKAYLDQYVIGQEEAKKVLAVAVYNHYKRI---NL----GGKI--------- 98

Query:   319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
             D+VEL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+IL KL
Sbjct:    99 DDVELSKSNILMLGPTGSGKTLLAQTLARFLNVPFAIADATALTEAGYVGEDVENILLKL 158

Query:   379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             +  A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +
Sbjct:   159 IQNADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQ 218

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
             G RKHP  + IQ+DT +ILFI GGAF  +EK I  R     +GFGA ++      V +  
Sbjct:   219 GGRKHPHQEFIQIDTTNILFIVGGAFEGIEKIIQNRIGKKGLGFGAEIKPKREQNVGEIL 278

Query:   499 XXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
                         DL+ +GLIPEFVGR PI+V+L AL ED LV++LTEPKNAL KQY++LF
Sbjct:   279 KHIMPE------DLLKFGLIPEFVGRLPIIVTLDALDEDALVRILTEPKNALIKQYQKLF 332

Query:   559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 608
              ++ V L F E ALR IA+KA  +NTGARGLRAILE ++ + MYEIP  K
Sbjct:   333 ELDGVTLEFEEDALRAIAQKAIKRNTGARGLRAILEEVMLDVMYEIPSRK 382


>UNIPROTKB|P0CAU2 [details] [associations]
            symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
            ClpX" species:190650 "Caulobacter crescentus CB15" [GO:0005515
            "protein binding" evidence=IPI] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0017111
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AE005673 PIR:D87492
            RefSeq:NP_420768.1 ProteinModelPortal:P0CAU2 SMR:P0CAU2
            IntAct:P0CAU2 PRIDE:P0CAU2 GeneID:942736 GenomeReviews:AE005673_GR
            KEGG:ccr:CC_1961 PATRIC:21300930 Uniprot:P0CAU2
        Length = 420

 Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
 Identities = 198/347 (57%), Positives = 255/347 (73%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
             + +PTP+EIC+ LD +VIGQ  AKKVL+VAV+NHYKR+ HA+                N+
Sbjct:    61 DGVPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHAS---------------KNN 105

Query:   319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
             D VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct:   106 D-VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKL 164

Query:   379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             L  A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct:   165 LQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 224

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
             G RKHP+ + +Q+DT +ILFICGGAF  LEK IS R    SIGFGA V         +  
Sbjct:   225 GGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAKVTD------PEER 278

Query:   499 XXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
                         DL  +GLIPEF+GR P++ +L  L E  LVK+LTEPKNA  KQY+RLF
Sbjct:   279 RTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLF 338

Query:   559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 605
              M N+ L FTE AL  +AKKA A+ TGARGLR+I+E IL E M+E+P
Sbjct:   339 EMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELP 385


>UNIPROTKB|P0A6H1 [details] [associations]
            symbol:clpX "ClpX" species:83333 "Escherichia coli K-12"
            [GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0006457 "protein folding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA;IDA] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0006950 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
            GO:GO:0008270 EMBL:U82664 GO:GO:0017111 InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
            KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 EMBL:L18867 EMBL:Z23278 PIR:A48709
            RefSeq:NP_414972.1 RefSeq:YP_488730.1 PDB:1OVX PDB:2DS5 PDB:2DS6
            PDB:2DS7 PDB:2DS8 PDB:3HTE PDB:3HWS PDBsum:1OVX PDBsum:2DS5
            PDBsum:2DS6 PDBsum:2DS7 PDBsum:2DS8 PDBsum:3HTE PDBsum:3HWS
            ProteinModelPortal:P0A6H1 SMR:P0A6H1 DIP:DIP-35907N IntAct:P0A6H1
            PaxDb:P0A6H1 PRIDE:P0A6H1 EnsemblBacteria:EBESCT00000004587
            EnsemblBacteria:EBESCT00000004721 EnsemblBacteria:EBESCT00000004722
            EnsemblBacteria:EBESCT00000015548 GeneID:12931741 GeneID:945083
            KEGG:ecj:Y75_p0426 KEGG:eco:b0438 PATRIC:32116029 EchoBASE:EB0157
            EcoGene:EG10159 BioCyc:EcoCyc:EG10159-MONOMER
            BioCyc:ECOL316407:JW0428-MONOMER BioCyc:MetaCyc:EG10159-MONOMER
            EvolutionaryTrace:P0A6H1 Genevestigator:P0A6H1 Uniprot:P0A6H1
        Length = 424

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 193/349 (55%), Positives = 258/349 (73%)

Query:   261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
             LPTP EI   LD +VIGQE+AKKVL+VAVYNHYKR     L+ G           D  + 
Sbjct:    64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107

Query:   321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
             VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL 
Sbjct:   108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167

Query:   381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
             + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+  VP +G 
Sbjct:   168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227

Query:   441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAX 499
             RKHP+ + +Q+DT  ILFICGGAF  L+K IS R +  S IGFGA V+A      +D A 
Sbjct:   228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282

Query:   500 XXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
                        DLI +GLIPEF+GR P++ +L  L+E+ L+++L EPKNAL KQY+ LF+
Sbjct:   283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342

Query:   560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 608
             +  V L F ++AL  IAKKA A+ TGARGLR+I+E+ L + MY++P ++
Sbjct:   343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSME 391


>TIGR_CMR|CPS_3784 [details] [associations]
            symbol:CPS_3784 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:167879 "Colwellia psychrerythraea 34H"
            [GO:0005524 "ATP binding" evidence=ISS] HAMAP:MF_00175
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
            InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
            SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
            GO:GO:0008270 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_270451.1
            HSSP:P0A6H5 ProteinModelPortal:Q47XL9 SMR:Q47XL9 STRING:Q47XL9
            PRIDE:Q47XL9 GeneID:3521714 KEGG:cps:CPS_3784 PATRIC:21470481
            BioCyc:CPSY167879:GI48-3806-MONOMER Uniprot:Q47XL9
        Length = 424

 Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
 Identities = 191/352 (54%), Positives = 257/352 (73%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
             E LP+P EI + LD++VIGQ+ AKKVL+VAVYNHYKR     L+ G           DN 
Sbjct:    63 EALPSPIEIRESLDEYVIGQDHAKKVLAVAVYNHYKR-----LRNG-----------DNH 106

Query:   319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
             + +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct:   107 NGIELGKSNILLIGPTGSGKTLLAQTLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166

Query:   379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct:   167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRA-NMRAGVTD 496
             G RKHP+ + +Q+DT  ILFICGGAF  L+K + +R    + IGFGA VR  +    +TD
Sbjct:   227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVEQRNHTGTGIGFGAEVRGKDQEISLTD 286

Query:   497 AAXXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
                           DL+ YGLIPEF+GR P+L +L  L E  L+++L EPKNAL KQ+  
Sbjct:   287 RLADVEPQ------DLVKYGLIPEFIGRLPVLATLRELDEAALIQILQEPKNALTKQFTA 340

Query:   557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 608
             LF M NV+L F   AL  IA+KA  + TGARGLR+I+E++L + MYE+P ++
Sbjct:   341 LFDMENVELEFRSDALHAIARKAMDRKTGARGLRSIVEAVLLDTMYELPSME 392


>TIGR_CMR|CBU_0739 [details] [associations]
            symbol:CBU_0739 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:227377 "Coxiella burnetii RSA 493"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
            evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            GO:GO:0046872 GO:GO:0008270 EMBL:AE016828 GenomeReviews:AE016828_GR
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH
            ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
            RefSeq:NP_819765.1 ProteinModelPortal:Q83DJ1 SMR:Q83DJ1
            PRIDE:Q83DJ1 GeneID:1208630 KEGG:cbu:CBU_0739 PATRIC:17930169
            BioCyc:CBUR227377:GJ7S-736-MONOMER Uniprot:Q83DJ1
        Length = 422

 Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
 Identities = 193/347 (55%), Positives = 251/347 (72%)

Query:   261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
             LPTP EI + LD++VIGQE AKKVLSVAVYNHYKR+         G + K        D+
Sbjct:    60 LPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRL---------GNQTKK-------DS 103

Query:   321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
             VE+ KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+I+ KLL 
Sbjct:   104 VEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDVENIIQKLLQ 163

Query:   381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
             +  ++VE A+ G++YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGT+ ++P +G 
Sbjct:   164 KCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGTVASIPPQGG 223

Query:   441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAXX 500
             RKHP+ + +Q+DT +ILFICGGAF DL K I  R   S IGF A VR   +   +  A  
Sbjct:   224 RKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRP--KEDFSREASK 281

Query:   501 XXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
                       DLI YGLIPEFVGR PI+ +L  L ED L+++LTEPKNAL KQY++LF  
Sbjct:   282 LIKQTEPG--DLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEF 339

Query:   561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 607
               V++ F E AL+ IAK+A  + TGARGLR+I+E  L + MY++P V
Sbjct:   340 EGVEIDFREDALKAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPGV 386


>UNIPROTKB|Q9KQS7 [details] [associations]
            symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
            ClpX" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
            activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
            ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
            GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
        Length = 426

 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 191/349 (54%), Positives = 252/349 (72%)

Query:   261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
             LPTP++I + LD +VIGQE AKKVL+VAVYNHYKR     L+ G              + 
Sbjct:    65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKR-----LRNGD----------TTSEG 109

Query:   321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
             VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL 
Sbjct:   110 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169

Query:   381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
             + +++V  A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G 
Sbjct:   170 KCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229

Query:   441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAX 499
             RKHP+ + +Q+DT  ILFICGGAF  L+K I +R    + IGFGA VR+       ++  
Sbjct:   230 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK-----DNSKT 284

Query:   500 XXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
                        DL+ YGLIPEF+GR P+  +LT L E  L+++L EPKNAL KQY  LF 
Sbjct:   285 LSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFE 344

Query:   560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 608
             + NV L F E AL+ IA KA  + TGARGLR+ILE++L E MYE+P ++
Sbjct:   345 LENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME 393


>TIGR_CMR|VC_1921 [details] [associations]
            symbol:VC_1921 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:686 "Vibrio cholerae O1 biovar El Tor"
            [GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
            activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
            ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
            GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
        Length = 426

 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 191/349 (54%), Positives = 252/349 (72%)

Query:   261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
             LPTP++I + LD +VIGQE AKKVL+VAVYNHYKR     L+ G              + 
Sbjct:    65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKR-----LRNGD----------TTSEG 109

Query:   321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
             VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL 
Sbjct:   110 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169

Query:   381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
             + +++V  A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G 
Sbjct:   170 KCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229

Query:   441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAX 499
             RKHP+ + +Q+DT  ILFICGGAF  L+K I +R    + IGFGA VR+       ++  
Sbjct:   230 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK-----DNSKT 284

Query:   500 XXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
                        DL+ YGLIPEF+GR P+  +LT L E  L+++L EPKNAL KQY  LF 
Sbjct:   285 LSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFE 344

Query:   560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 608
             + NV L F E AL+ IA KA  + TGARGLR+ILE++L E MYE+P ++
Sbjct:   345 LENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME 393


>UNIPROTKB|P0A528 [details] [associations]
            symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
            ClpX" species:1773 "Mycobacterium tuberculosis" [GO:0005515
            "protein binding" evidence=IPI] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00175
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
            InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
            SMART:SM00994 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
            GO:GO:0006457 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270 EMBL:BX842579
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:IMFEVPS PIR:H70864
            RefSeq:NP_216973.1 RefSeq:NP_337018.1 RefSeq:YP_006515894.1
            ProteinModelPortal:P0A528 SMR:P0A528 PRIDE:P0A528
            EnsemblBacteria:EBMYCT00000001091 EnsemblBacteria:EBMYCT00000069736
            GeneID:13319167 GeneID:888167 GeneID:925794 KEGG:mtc:MT2532
            KEGG:mtu:Rv2457c KEGG:mtv:RVBD_2457c PATRIC:18127322
            TubercuList:Rv2457c Uniprot:P0A528
        Length = 426

 Score = 908 (324.7 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
 Identities = 189/347 (54%), Positives = 245/347 (70%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
             ++LP P EI + L+ +VIGQ+ AK+ L+VAVYNHYKRI      + S  EP         
Sbjct:    59 DELPKPAEIREFLEGYVIGQDTAKRTLAVAVYNHYKRIQAGEKGRDSRCEP--------- 109

Query:   319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
               VEL KSN+L++GPTG GKT LA+TLA+ +NVPF IADAT LT+AGYVGEDVE+IL KL
Sbjct:   110 --VELTKSNILMLGPTGCGKTYLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLKL 167

Query:   379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             +  A+++V+ A+ G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT  +VP +
Sbjct:   168 IQAADYDVKRAETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTQASVPPQ 227

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
             G RKHP  + IQ+DT ++LFI  GAF  LEK I ER     +GFGA VR+      TD  
Sbjct:   228 GGRKHPHQEFIQIDTTNVLFIVAGAFAGLEKIIYERVGKRGLGFGAEVRSKAEIDTTD-- 285

Query:   499 XXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
                         DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF
Sbjct:   286 ----HFADVMPEDLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYIRLF 341

Query:   559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 605
              M+ V+L FT+ AL  IA +A  + TGARGLRAI+E +L   MY+IP
Sbjct:   342 EMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388

 Score = 39 (18.8 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query:    13 DIASSSMLPSSRTRFTPLVAGPVNYLSNNSI 43
             D+   S    S+ +   L+AGP  Y+ +  I
Sbjct:     9 DLLKCSFCGKSQKQVKKLIAGPGVYICDECI 39


>TIGR_CMR|APH_0969 [details] [associations]
            symbol:APH_0969 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:212042 "Anaplasma phagocytophilum HZ"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0006457 "protein
            folding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
            evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
            HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            GO:GO:0046872 GO:GO:0008270 EMBL:CP000235 GenomeReviews:CP000235_GR
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            RefSeq:YP_505536.1 ProteinModelPortal:Q2GJB5 SMR:Q2GJB5
            STRING:Q2GJB5 PRIDE:Q2GJB5 GeneID:3930607 KEGG:aph:APH_0969
            PATRIC:20950654 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            OMA:SDLELEH ProtClustDB:PRK05342 BioCyc:APHA212042:GHPM-981-MONOMER
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 Uniprot:Q2GJB5
        Length = 415

 Score = 903 (322.9 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
 Identities = 193/340 (56%), Positives = 250/340 (73%)

Query:   264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVEL 323
             P+EI + LD++VIGQE +KKVLSVAVYNHYKR+      + SG   +          VE+
Sbjct:    60 PREIKEVLDEYVIGQEHSKKVLSVAVYNHYKRL------RNSGVISE----------VEI 103

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
              KSNVLL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+IL KLL  A 
Sbjct:   104 SKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQAAN 163

Query:   384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 443
             FNVEAAQ+G++YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G RKH
Sbjct:   164 FNVEAAQRGIIYIDEVDKISRKSENASITRDVSGEGVQQALLKVIEGTVSSVPPQGGRKH 223

Query:   444 PRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAXXXXX 503
             P  + IQ+ T +ILFI GGAF  LEK I  R + SS+GF A V++ M +   D       
Sbjct:   224 PHQEFIQISTDNILFIFGGAFDGLEKIIEARNRGSSMGFEANVQS-MVSPTKDVLSYAEP 282

Query:   504 XXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNV 563
                    DL+ +GLIPEF+GR P++ SL  L E+ L +VL EPKN+L KQY +LF M+N+
Sbjct:   283 E------DLVKFGLIPEFIGRIPVITSLGKLDENTLFRVLVEPKNSLVKQYAKLFEMDNL 336

Query:   564 KLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
             +L F + AL  IA+KA  +NTGARGLRAI+ES+L + M++
Sbjct:   337 ELKFDDDALMAIARKAVDRNTGARGLRAIMESLLLDFMFD 376

 Score = 38 (18.4 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query:    30 LVAGPVNYLSNNSIGRAAG 48
             L+AGP  Y+ N  +    G
Sbjct:    24 LIAGPEAYICNECVELCGG 42


>TIGR_CMR|ECH_0900 [details] [associations]
            symbol:ECH_0900 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:205920 "Ehrlichia chaffeensis str. Arkansas"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
            Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
            GO:GO:0008270 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 RefSeq:YP_507694.1 ProteinModelPortal:Q2GFT9
            SMR:Q2GFT9 STRING:Q2GFT9 PRIDE:Q2GFT9 GeneID:3927295
            KEGG:ech:ECH_0900 PATRIC:20577200
            BioCyc:ECHA205920:GJNR-903-MONOMER Uniprot:Q2GFT9
        Length = 406

 Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
 Identities = 196/342 (57%), Positives = 247/342 (72%)

Query:   264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVEL 323
             PKEI K LD++VIGQE +KKVLSVAVYNHYKR+  +NL   S               VE+
Sbjct:    61 PKEIKKVLDEYVIGQEHSKKVLSVAVYNHYKRL--SNLSVIS--------------EVEI 104

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
              KSNVLL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+IL KLL  A 
Sbjct:   105 SKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQAAN 164

Query:   384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 443
             FNV+AAQ+G++YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G RKH
Sbjct:   165 FNVDAAQRGIIYIDEVDKISRKSENTSITRDVSGEGVQQALLKVIEGTVSSVPPQGGRKH 224

Query:   444 PRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAXXXXX 503
             P  + IQ++T +ILFI GGAF  L+K I  R + SS+GF         A V   +     
Sbjct:   225 PHQEFIQINTDNILFIFGGAFDGLDKIIESRHRGSSMGF--------EANVQKVSKNKDI 276

Query:   504 XXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNV 563
                    DL+ +GLIPEFVGR P++ SL  L E  L ++L EPKN+L KQYK+LF M+N+
Sbjct:   277 FCYTEPEDLVKFGLIPEFVGRIPVITSLGELDESTLCRILVEPKNSLVKQYKKLFEMDNI 336

Query:   564 KLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 605
              L F + AL VIAKKA  + TGARGLRAILE++L + M+E P
Sbjct:   337 NLQFDDSALSVIAKKAAVRKTGARGLRAILEALLLDLMFESP 378


>TIGR_CMR|GSU_1791 [details] [associations]
            symbol:GSU_1791 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:243231 "Geobacter sulfurreducens PCA"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
            Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 EMBL:AE017180
            GenomeReviews:AE017180_GR GO:GO:0017111 InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
            KO:K03544 ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 OMA:IMFEVPS RefSeq:NP_952841.1
            ProteinModelPortal:Q74C83 SMR:Q74C83 PRIDE:Q74C83 GeneID:2686411
            KEGG:gsu:GSU1791 PATRIC:22026429
            BioCyc:GSUL243231:GH27-1811-MONOMER Uniprot:Q74C83
        Length = 417

 Score = 893 (319.4 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
 Identities = 185/347 (53%), Positives = 252/347 (72%)

Query:   261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
             LP P+EI   LD++VIGQ++AKKVL+VAVYNHYKRI        S  +P          +
Sbjct:    63 LPKPREIKDVLDEYVIGQDQAKKVLAVAVYNHYKRIE-------SMGKPS---------D 106

Query:   321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
             VE++KSN+LL+GPTGSGKTLLA+TLAR + VPF +ADAT LT+AGYVGEDVE+I+  LL 
Sbjct:   107 VEMQKSNILLLGPTGSGKTLLAQTLARILKVPFAMADATNLTEAGYVGEDVENIILNLLQ 166

Query:   381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
              A+++VE AQ+G++YIDE+DKI +K++S +I+RDVSGEGVQQALLK++EGT+ +VP KG 
Sbjct:   167 AADYDVERAQKGIIYIDEIDKIARKSDSPSITRDVSGEGVQQALLKIIEGTVASVPPKGG 226

Query:   441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM--RAGVTDAA 498
             RKHP+ + +++DT +ILFICGGAF  L+  I +R     +GFGA V++ +  RAG     
Sbjct:   227 RKHPQQEFLKVDTTNILFICGGAFAGLDSIIQQRIGVKKLGFGADVKSKVEKRAG----- 281

Query:   499 XXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
                         DL+ +G IPEF+GR P+L +L  L E  +V++L EPKNAL KQY++LF
Sbjct:   282 ---ELLTEVTPEDLLKFGFIPEFIGRLPVLATLRELDETAMVQILKEPKNALIKQYQKLF 338

Query:   559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 605
              M +VKL FT+ +L  I+++A  + TGARGLR+ILE+ + + MYEIP
Sbjct:   339 EMEHVKLKFTDGSLVAISREALKRKTGARGLRSILENAMLDIMYEIP 385

 Score = 41 (19.5 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query:    12 SDIASSSMLPSSRTRFTPLVAGPVNYLSNNSI 43
             SD  + S    S+     L+AGP  Y+ +  I
Sbjct:     8 SDNLTCSFCGKSQDEVKKLIAGPTVYICDECI 39


>TIGR_CMR|BA_4704 [details] [associations]
            symbol:BA_4704 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:198094 "Bacillus anthracis str. Ames"
            [GO:0006508 "proteolysis" evidence=ISS] HAMAP:MF_00175
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
            InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
            SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_846917.1
            RefSeq:YP_021352.1 RefSeq:YP_030616.1 ProteinModelPortal:Q81LB9
            SMR:Q81LB9 PRIDE:Q81LB9 DNASU:1083685
            EnsemblBacteria:EBBACT00000013271 EnsemblBacteria:EBBACT00000014313
            EnsemblBacteria:EBBACT00000019954 GeneID:1083685 GeneID:2816065
            GeneID:2851842 KEGG:ban:BA_4704 KEGG:bar:GBAA_4704 KEGG:bat:BAS4369
            OMA:IMFEVPS BioCyc:BANT260799:GJAJ-4424-MONOMER
            BioCyc:BANT261594:GJ7F-4572-MONOMER Uniprot:Q81LB9
        Length = 419

 Score = 896 (320.5 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
 Identities = 187/350 (53%), Positives = 253/350 (72%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
             +D+P P EI + LD++VIGQ+ AKK L+VAVYNHYKRI ++N K                
Sbjct:    59 KDVPKPVEIREILDEYVIGQDNAKKALAVAVYNHYKRI-NSNSKI--------------- 102

Query:   319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
             D+VEL KSN+ L+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct:   103 DDVELAKSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 162

Query:   379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             +  A+++VE A++G++YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct:   163 IQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQ 222

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
             G RKHP  + IQ+DT +ILFICGGAF  +E  I  R  +  IGFG+  +    A V +  
Sbjct:   223 GGRKHPHQEFIQIDTTNILFICGGAFDGIEPIIKRRLGEKVIGFGSEKK---NADVNEK- 278

Query:   499 XXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
                         DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L 
Sbjct:   279 ---HVLSHVLPEDLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLL 335

Query:   559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 608
              +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:   336 ELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385

 Score = 37 (18.1 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query:    18 SMLPSSRTRFTPLVAGPVNYLSNNSI 43
             S    ++T+   LVAGP  Y+ +  I
Sbjct:    14 SFCGKTQTQVRKLVAGPGVYICDECI 39


>MGI|MGI:1346017 [details] [associations]
            symbol:Clpx "caseinolytic peptidase X (E.coli)"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0006457 "protein folding" evidence=IEA] [GO:0009841
            "mitochondrial endopeptidase Clp complex" evidence=ISO] [GO:0010952
            "positive regulation of peptidase activity" evidence=ISO]
            [GO:0016504 "peptidase activator activity" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0042645
            "mitochondrial nucleoid" evidence=ISO] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
            catabolic process" evidence=ISO] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            MGI:MGI:1346017 GO:GO:0005524 GO:GO:0005634 GO:GO:0006457
            GO:GO:0005743 GO:GO:0046872 GO:GO:0016504 GO:GO:0016887
            GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
            KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
            HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
            EMBL:AJ276991 EMBL:AF134983 EMBL:AC110235 IPI:IPI00119808
            RefSeq:NP_035932.2 UniGene:Mm.30088 ProteinModelPortal:Q9JHS4
            SMR:Q9JHS4 STRING:Q9JHS4 PhosphoSite:Q9JHS4 PaxDb:Q9JHS4
            PRIDE:Q9JHS4 Ensembl:ENSMUST00000015501 GeneID:270166
            KEGG:mmu:270166 UCSC:uc009qdb.1 GeneTree:ENSGT00390000017625
            InParanoid:Q9JHS4 ChiTaRS:CLPX NextBio:393279 Bgee:Q9JHS4
            CleanEx:MM_CLPX Genevestigator:Q9JHS4 GermOnline:ENSMUSG00000015357
            Uniprot:Q9JHS4
        Length = 634

 Score = 759 (272.2 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
 Identities = 159/316 (50%), Positives = 217/316 (68%)

Query:   308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
             E +    +D+  D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct:   269 EKRGGEVLDSSQDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 328

Query:   367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
             VGED+ES++ KLL  A +NVE AQQG+V++DEVDKI      ++  RDV GEGVQQ LLK
Sbjct:   329 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 387

Query:   427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
             +LEGTIVNVPEK +RK  RG+++Q+DT ++LF+  GAF  L++ IS R+ +  +GFG P 
Sbjct:   388 LLEGTIVNVPEKNSRKL-RGETVQVDTTNVLFVASGAFNGLDRIISRRKNEKYLGFGTPS 446

Query:   487 ---RANMRAGVTDAAXXXXXXXXXX-------------XXDLIAYGLIPEFVGRFPILVS 530
                +    A   D A                         DLI +G+IPEFVGR P++V 
Sbjct:   447 NLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVP 506

Query:   531 LTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLR 590
             L +L E  LV++LTEP+NA+  QY+ LFSM+  +L+ TE AL+ IA+ A  + TGARGLR
Sbjct:   507 LHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLR 566

Query:   591 AILESILTEAMYEIPD 606
             +I+E +L E M+E+P+
Sbjct:   567 SIMEKLLLEPMFEVPN 582

 Score = 155 (59.6 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
 Identities = 33/54 (61%), Positives = 42/54 (77%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ + AE +T+
Sbjct:   168 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEAEKQTS 221


>RGD|1304883 [details] [associations]
            symbol:Clpx "ClpX caseinolytic peptidase X homolog (E. coli)"
            species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0004176 "ATP-dependent peptidase activity"
            evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
            [GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
            [GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006457
            "protein folding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IEA;ISO] [GO:0010952 "positive regulation of peptidase
            activity" evidence=ISO] [GO:0016504 "peptidase activator activity"
            evidence=IEA;ISO] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0051603 "proteolysis involved in
            cellular protein catabolic process" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 RGD:1304883
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
            GO:GO:0046872 GO:GO:0016504 GO:GO:0042645 GO:GO:0051603
            GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 CTD:10845 HOVERGEN:HBG004940 OMA:KSIIKEP
            OrthoDB:EOG46DM2G GO:GO:0009841 GeneTree:ENSGT00390000017625
            EMBL:BC085867 IPI:IPI00196478 RefSeq:NP_001007804.1
            UniGene:Rn.203913 HSSP:O25926 ProteinModelPortal:Q5U2U0 SMR:Q5U2U0
            STRING:Q5U2U0 PhosphoSite:Q5U2U0 PRIDE:Q5U2U0
            Ensembl:ENSRNOT00000048302 GeneID:300786 KEGG:rno:300786
            UCSC:RGD:1304883 InParanoid:Q5U2U0 NextBio:647505
            ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0 Uniprot:Q5U2U0
        Length = 633

 Score = 762 (273.3 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
 Identities = 166/345 (48%), Positives = 231/345 (66%)

Query:   283 KVLSVAVYNHYKRIYHANLKK-GSGAEPKT---AAAVDND-DNVELEKSNVLLMGPTGSG 337
             K+L +A  + +     A++++ GS   P+       +D+  D+++LEKSN+LL+GPTGSG
Sbjct:   239 KLLQIAGISPHGNALGASMQQQGSQQMPQEKRGGEVLDSPHDDIKLEKSNILLLGPTGSG 298

Query:   338 KTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYID 397
             KTLLA+TLA+ ++VPF I D TTLTQAGYVGED+ES++ KLL  A +NVE AQQG+V++D
Sbjct:   299 KTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLD 358

Query:   398 EVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDIL 457
             EVDKI      ++  RDV GEGVQQ LLK+LEGTIVNVPEK +RK  RG+++Q+DT +IL
Sbjct:   359 EVDKIGS-VPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNIL 416

Query:   458 FICGGAFVDLEKTISERRQDSSIGFGAPV---RANMRAGVTDAAXXXXXXXXXX------ 508
             F+  GAF  L++ IS R+ +  +GFG P    +    A   D A                
Sbjct:   417 FVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKD 476

Query:   509 -------XXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMN 561
                      DLI +G+IPEFVGR P++V L +L E  LV++LTEP+NA+  QY+ LFSM+
Sbjct:   477 RLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMD 536

Query:   562 NVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 606
               +L+ TE AL+ IA+ A  + TGARGLR+I+E +L E M+E+P+
Sbjct:   537 KCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPN 581

 Score = 151 (58.2 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220


>UNIPROTKB|Q5U2U0 [details] [associations]
            symbol:Clpx "ATP-dependent Clp protease ATP-binding subunit
            clpX-like, mitochondrial" species:10116 "Rattus norvegicus"
            [GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0009841 "mitochondrial endopeptidase Clp complex" evidence=IEA]
            [GO:0016504 "peptidase activator activity" evidence=IEA]
            [GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0051082
            "unfolded protein binding" evidence=IEA] [GO:0051603 "proteolysis
            involved in cellular protein catabolic process" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 RGD:1304883 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0046872 GO:GO:0016504
            GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
            KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
            HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
            GeneTree:ENSGT00390000017625 EMBL:BC085867 IPI:IPI00196478
            RefSeq:NP_001007804.1 UniGene:Rn.203913 HSSP:O25926
            ProteinModelPortal:Q5U2U0 SMR:Q5U2U0 STRING:Q5U2U0
            PhosphoSite:Q5U2U0 PRIDE:Q5U2U0 Ensembl:ENSRNOT00000048302
            GeneID:300786 KEGG:rno:300786 UCSC:RGD:1304883 InParanoid:Q5U2U0
            NextBio:647505 ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0
            Uniprot:Q5U2U0
        Length = 633

 Score = 762 (273.3 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
 Identities = 166/345 (48%), Positives = 231/345 (66%)

Query:   283 KVLSVAVYNHYKRIYHANLKK-GSGAEPKT---AAAVDND-DNVELEKSNVLLMGPTGSG 337
             K+L +A  + +     A++++ GS   P+       +D+  D+++LEKSN+LL+GPTGSG
Sbjct:   239 KLLQIAGISPHGNALGASMQQQGSQQMPQEKRGGEVLDSPHDDIKLEKSNILLLGPTGSG 298

Query:   338 KTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYID 397
             KTLLA+TLA+ ++VPF I D TTLTQAGYVGED+ES++ KLL  A +NVE AQQG+V++D
Sbjct:   299 KTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLD 358

Query:   398 EVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDIL 457
             EVDKI      ++  RDV GEGVQQ LLK+LEGTIVNVPEK +RK  RG+++Q+DT +IL
Sbjct:   359 EVDKIGS-VPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKL-RGETVQVDTTNIL 416

Query:   458 FICGGAFVDLEKTISERRQDSSIGFGAPV---RANMRAGVTDAAXXXXXXXXXX------ 508
             F+  GAF  L++ IS R+ +  +GFG P    +    A   D A                
Sbjct:   417 FVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKD 476

Query:   509 -------XXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMN 561
                      DLI +G+IPEFVGR P++V L +L E  LV++LTEP+NA+  QY+ LFSM+
Sbjct:   477 RLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMD 536

Query:   562 NVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 606
               +L+ TE AL+ IA+ A  + TGARGLR+I+E +L E M+E+P+
Sbjct:   537 KCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPN 581

 Score = 151 (58.2 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220


>UNIPROTKB|F1N155 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051603 "proteolysis involved in cellular protein
            catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
            nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
            evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
            activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
            GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
            GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:DAAA02027858
            EMBL:DAAA02027859 EMBL:DAAA02027860 IPI:IPI00696713
            Ensembl:ENSBTAT00000011038 Uniprot:F1N155
        Length = 607

 Score = 760 (272.6 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
 Identities = 160/316 (50%), Positives = 217/316 (68%)

Query:   308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
             E +    +D+  D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct:   242 EKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 301

Query:   367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
             VGED+ES++ KLL  A +NVE AQQG+V++DEVDKI      ++  RDV GEGVQQ LLK
Sbjct:   302 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 360

Query:   427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
             +LEGTIVNVPEK +RK  RG+++Q+DT +ILF+  GAF  L++ IS R+ +  +GFG P 
Sbjct:   361 LLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPS 419

Query:   487 ---RANMRAGVTDAAXXXXXXXXXX-------------XXDLIAYGLIPEFVGRFPILVS 530
                +    A   D A                         DLI +G+IPEFVGR P++V 
Sbjct:   420 NLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVP 479

Query:   531 LTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLR 590
             L +L E  LV++LTEP+NA+  QY+ LFSM+  +L+ TE AL+ IA+ A  + TGARGLR
Sbjct:   480 LHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLR 539

Query:   591 AILESILTEAMYEIPD 606
             +I+E +L E M+E+P+
Sbjct:   540 SIMEKLLLEPMFEVPN 555

 Score = 151 (58.2 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   141 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 194


>UNIPROTKB|E2QSS3 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0051603 "proteolysis involved in cellular
            protein catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
            nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
            evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
            activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
            GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845 OMA:KSIIKEP
            GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AAEX03016215
            RefSeq:XP_852508.1 Ensembl:ENSCAFT00000027135 GeneID:609344
            KEGG:cfa:609344 NextBio:20894946 Uniprot:E2QSS3
        Length = 633

 Score = 760 (272.6 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
 Identities = 160/316 (50%), Positives = 217/316 (68%)

Query:   308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
             E +    +D+  D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct:   268 EKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 327

Query:   367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
             VGED+ES++ KLL  A +NVE AQQG+V++DEVDKI      ++  RDV GEGVQQ LLK
Sbjct:   328 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 386

Query:   427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
             +LEGTIVNVPEK +RK  RG+++Q+DT +ILF+  GAF  L++ IS R+ +  +GFG P 
Sbjct:   387 LLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPS 445

Query:   487 ---RANMRAGVTDAAXXXXXXXXXX-------------XXDLIAYGLIPEFVGRFPILVS 530
                +    A   D A                         DLI +G+IPEFVGR P++V 
Sbjct:   446 NLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVP 505

Query:   531 LTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLR 590
             L +L E  LV++LTEP+NA+  QY+ LFSM+  +L+ TE AL+ IA+ A  + TGARGLR
Sbjct:   506 LHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLR 565

Query:   591 AILESILTEAMYEIPD 606
             +I+E +L E M+E+P+
Sbjct:   566 SIMEKLLLEPMFEVPN 581

 Score = 151 (58.2 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220


>UNIPROTKB|O76031 [details] [associations]
            symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
            clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0006457
            "protein folding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IDA] [GO:0016504 "peptidase activator activity"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=NAS;IDA]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005743 "mitochondrial
            inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0004176 "ATP-dependent peptidase activity" evidence=IDA]
            [GO:0051603 "proteolysis involved in cellular protein catabolic
            process" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
            evidence=IDA] [GO:0010952 "positive regulation of peptidase
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
            GO:GO:0046872 GO:GO:0016504 GO:GO:0016887 GO:GO:0042645
            EMBL:CH471082 GO:GO:0051603 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AJ006267
            EMBL:AJ276980 EMBL:AJ276981 EMBL:AJ276966 EMBL:AJ276967
            EMBL:AJ276968 EMBL:AJ276969 EMBL:AJ276970 EMBL:AJ276971
            EMBL:AJ276972 EMBL:AJ276973 EMBL:AJ276974 EMBL:AJ276975
            EMBL:AJ276976 EMBL:AJ276977 EMBL:AK292316 EMBL:BC130373
            EMBL:BC136487 IPI:IPI00008728 RefSeq:NP_006651.2 UniGene:Hs.113823
            ProteinModelPortal:O76031 SMR:O76031 IntAct:O76031
            MINT:MINT-3002168 STRING:O76031 PhosphoSite:O76031 PaxDb:O76031
            PeptideAtlas:O76031 PRIDE:O76031 Ensembl:ENST00000300107
            GeneID:10845 KEGG:hsa:10845 UCSC:uc002aom.3 CTD:10845
            GeneCards:GC15M065440 HGNC:HGNC:2088 HPA:HPA040262
            neXtProt:NX_O76031 PharmGKB:PA26614 HOVERGEN:HBG004940
            InParanoid:O76031 OMA:KSIIKEP OrthoDB:EOG46DM2G PhylomeDB:O76031
            GenomeRNAi:10845 NextBio:41174 ArrayExpress:O76031 Bgee:O76031
            CleanEx:HS_CLPX Genevestigator:O76031 GermOnline:ENSG00000166855
            GO:GO:0009841 Uniprot:O76031
        Length = 633

 Score = 760 (272.6 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
 Identities = 160/316 (50%), Positives = 217/316 (68%)

Query:   308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
             E +    +D+  D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct:   268 EKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 327

Query:   367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
             VGED+ES++ KLL  A +NVE AQQG+V++DEVDKI      ++  RDV GEGVQQ LLK
Sbjct:   328 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 386

Query:   427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
             +LEGTIVNVPEK +RK  RG+++Q+DT +ILF+  GAF  L++ IS R+ +  +GFG P 
Sbjct:   387 LLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPS 445

Query:   487 ---RANMRAGVTDAAXXXXXXXXXX-------------XXDLIAYGLIPEFVGRFPILVS 530
                +    A   D A                         DLI +G+IPEFVGR P++V 
Sbjct:   446 NLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVP 505

Query:   531 LTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLR 590
             L +L E  LV++LTEP+NA+  QY+ LFSM+  +L+ TE AL+ IA+ A  + TGARGLR
Sbjct:   506 LHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLR 565

Query:   591 AILESILTEAMYEIPD 606
             +I+E +L E M+E+P+
Sbjct:   566 SIMEKLLLEPMFEVPN 581

 Score = 151 (58.2 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220


>UNIPROTKB|F1SJL5 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0051603 "proteolysis involved in cellular protein
            catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
            nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
            evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
            activity" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0051082 "unfolded protein binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
            GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
            GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:CU856492
            Ensembl:ENSSSCT00000005437 Uniprot:F1SJL5
        Length = 619

 Score = 760 (272.6 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
 Identities = 160/316 (50%), Positives = 217/316 (68%)

Query:   308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
             E +    +D+  D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct:   254 EKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 313

Query:   367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
             VGED+ES++ KLL  A +NVE AQQG+V++DEVDKI      ++  RDV GEGVQQ LLK
Sbjct:   314 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 372

Query:   427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
             +LEGTIVNVPEK +RK  RG+++Q+DT +ILF+  GAF  L++ IS R+ +  +GFG P 
Sbjct:   373 LLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPS 431

Query:   487 ---RANMRAGVTDAAXXXXXXXXXX-------------XXDLIAYGLIPEFVGRFPILVS 530
                +    A   D A                         DLI +G+IPEFVGR P++V 
Sbjct:   432 NLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVP 491

Query:   531 LTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLR 590
             L +L E  LV++LTEP+NA+  QY+ LFSM+  +L+ TE AL+ IA+ A  + TGARGLR
Sbjct:   492 LHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLR 551

Query:   591 AILESILTEAMYEIPD 606
             +I+E +L E M+E+P+
Sbjct:   552 SIMEKLLLEPMFEVPN 567

 Score = 151 (58.2 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220


>UNIPROTKB|F1NA92 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0051082
            "unfolded protein binding" evidence=IEA] [GO:0004176 "ATP-dependent
            peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743
            "mitochondrial inner membrane" evidence=IEA] [GO:0009841
            "mitochondrial endopeptidase Clp complex" evidence=IEA] [GO:0016504
            "peptidase activator activity" evidence=IEA] [GO:0042645
            "mitochondrial nucleoid" evidence=IEA] [GO:0051603 "proteolysis
            involved in cellular protein catabolic process" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
            GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
            GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AADN02038940
            IPI:IPI00651275 Ensembl:ENSGALT00000011804 ArrayExpress:F1NA92
            Uniprot:F1NA92
        Length = 630

 Score = 763 (273.6 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
 Identities = 160/316 (50%), Positives = 218/316 (68%)

Query:   308 EPKTAAAVDN-DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
             E +    +D+ +D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct:   265 EKRGGEVLDSPNDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 324

Query:   367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
             VGED+ES++ KLL  A +NVE AQQG+V++DEVDKI      ++  RDV GEGVQQ LLK
Sbjct:   325 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 383

Query:   427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
             +LEGTIVNVPEK +RK  RG+++Q+DT +ILF+  GAF  L++ IS R+ +  +GFG P 
Sbjct:   384 LLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPS 442

Query:   487 ---RANMRAGVTDAAXXXXXXXXXX-------------XXDLIAYGLIPEFVGRFPILVS 530
                +    A   D A                         DLI +G+IPEFVGR P++V 
Sbjct:   443 NMGKGRRAAAAADLANISGESNTHEDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVP 502

Query:   531 LTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLR 590
             L +L E  LV++LTEP+NA+  QY+ LFSM+  +L+ TE AL+ IA+ A  + TGARGLR
Sbjct:   503 LHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLR 562

Query:   591 AILESILTEAMYEIPD 606
             +I+E +L E M+E+P+
Sbjct:   563 SIMEKLLLEPMFEVPN 578

 Score = 147 (56.8 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   164 PPPKKIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 217


>TIGR_CMR|NSE_0753 [details] [associations]
            symbol:NSE_0753 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:222891 "Neorickettsia sennetsu str. Miyayama"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
            Clp complex" evidence=ISS] [GO:0051082 "unfolded protein binding"
            evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            GO:GO:0046872 GO:GO:0008270 GO:GO:0017111 EMBL:CP000237
            GenomeReviews:CP000237_GR InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
            OMA:IMFEVPS RefSeq:YP_506628.1 ProteinModelPortal:Q2GD18
            STRING:Q2GD18 PRIDE:Q2GD18 GeneID:3931978 KEGG:nse:NSE_0753
            PATRIC:22681511 BioCyc:NSEN222891:GHFU-764-MONOMER Uniprot:Q2GD18
        Length = 400

 Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
 Identities = 184/350 (52%), Positives = 249/350 (71%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVE 322
             TPK+I K  D F+  QE AKK+LSVAVYNHYK      L               N  +VE
Sbjct:    59 TPKDIKKYFDSFITAQEDAKKILSVAVYNHYKCFVGNRL---------------NSKDVE 103

Query:   323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
             + KSN+L++GPTG GKTL AKTLAR +NVPF I DAT++T+AGYVG+DVE+IL  LL  A
Sbjct:   104 ITKSNILIIGPTGCGKTLFAKTLARFLNVPFAICDATSITEAGYVGDDVENILRMLLQSA 163

Query:   383 EFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARK 442
             ++NVEAAQ+G+VYIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGTI +VP +G RK
Sbjct:   164 DYNVEAAQKGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRK 223

Query:   443 HPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAXXXX 502
             HP  ++IQ+DT +ILFICGGAFV L+  I+ R+  +++GF + +++      T       
Sbjct:   224 HPNQETIQIDTTNILFICGGAFVGLDNIIANRQSINTMGFKSELQSK-EVSPT------- 275

Query:   503 XXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNN 562
                     DL+ +G+IPEFVGR P++  L  LTED LV++L+ PKNAL KQY  LF M+N
Sbjct:   276 ILKKVEPEDLVKFGMIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALVKQYVCLFGMDN 335

Query:   563 VKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP---DVKT 609
             ++L F+++AL+ +A+ A  +  GARGLRAI+ES+L   M+E+P   DVKT
Sbjct:   336 IQLSFSDEALKTVARAAIKRKVGARGLRAIMESVLRNYMFELPSNKDVKT 385


>UNIPROTKB|E1BX77 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0051082
            "unfolded protein binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
            GO:GO:0006457 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625
            EMBL:AADN02038940 IPI:IPI00820856 Ensembl:ENSGALT00000038419
            ArrayExpress:E1BX77 Uniprot:E1BX77
        Length = 617

 Score = 754 (270.5 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 160/317 (50%), Positives = 218/317 (68%)

Query:   308 EPKTAAAVDN-DDNVELEKSNVLLMGPTGS-GKTLLAKTLARHVNVPFVIADATTLTQAG 365
             E +    +D+ +D+++LEKSN+LL+GPTGS GKTLLA+TLA+ ++VPF I D TTLTQAG
Sbjct:   251 EKRGGEVLDSPNDDIKLEKSNILLLGPTGSAGKTLLAQTLAKCLDVPFAICDCTTLTQAG 310

Query:   366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
             YVGED+ES++ KLL  A +NVE AQQG+V++DEVDKI      ++  RDV GEGVQQ LL
Sbjct:   311 YVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLL 369

Query:   426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
             K+LEGTIVNVPEK +RK  RG+++Q+DT +ILF+  GAF  L++ IS R+ +  +GFG P
Sbjct:   370 KLLEGTIVNVPEKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTP 428

Query:   486 V---RANMRAGVTDAAXXXXXXXXXX-------------XXDLIAYGLIPEFVGRFPILV 529
                 +    A   D A                         DLI +G+IPEFVGR P++V
Sbjct:   429 SNMGKGRRAAAAADLANISGESNTHEDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVV 488

Query:   530 SLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGL 589
              L +L E  LV++LTEP+NA+  QY+ LFSM+  +L+ TE AL+ IA+ A  + TGARGL
Sbjct:   489 PLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGL 548

Query:   590 RAILESILTEAMYEIPD 606
             R+I+E +L E M+E+P+
Sbjct:   549 RSIMEKLLLEPMFEVPN 565

 Score = 147 (56.8 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   164 PPPKKIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 217


>ZFIN|ZDB-GENE-040912-143 [details] [associations]
            symbol:clpx "ClpX caseinolytic peptidase X homolog
            (E. coli)" species:7955 "Danio rerio" [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            ZFIN:ZDB-GENE-040912-143 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845
            HOVERGEN:HBG004940 OrthoDB:EOG46DM2G EMBL:BC081643 IPI:IPI00494396
            RefSeq:NP_001004581.1 UniGene:Dr.4306 ProteinModelPortal:Q66HW5
            STRING:Q66HW5 GeneID:447842 KEGG:dre:447842 NextBio:20832363
            ArrayExpress:Q66HW5 Bgee:Q66HW5 Uniprot:Q66HW5
        Length = 610

 Score = 743 (266.6 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
 Identities = 158/323 (48%), Positives = 217/323 (67%)

Query:   301 LKKGSGAEPKTAAAVDNDD-NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADAT 359
             L + +  E +    +D+   +++LEKSN++L+GPTGSGKTLLA+TLA+ ++VPF I D T
Sbjct:   237 LNQQTPPEKRGGEVLDSTHTDIKLEKSNIVLLGPTGSGKTLLAQTLAKCLDVPFAICDCT 296

Query:   360 TLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEG 419
             TLTQAGYVGED+ES++ KLL  A + +E AQQG+V++DEVDKI      ++  RDV GEG
Sbjct:   297 TLTQAGYVGEDIESVIAKLLQDANYVIEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEG 355

Query:   420 VQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS 479
             VQQ LLK+LEGTIVNVPEK  RK  RG+++Q+DT +ILF+  GAF  L++ IS R+ +  
Sbjct:   356 VQQGLLKLLEGTIVNVPEKNTRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKY 414

Query:   480 IGFGAPVR-------------ANMRAGVTDAAXXXXXXXXXX----XXDLIAYGLIPEFV 522
             +GFG P               AN   G  DA                 DLI +G+IPEFV
Sbjct:   415 LGFGTPSNMGKGRRAAAAADLANTTGGEVDAVAEIEEKDRLLKHVEARDLIEFGMIPEFV 474

Query:   523 GRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAK 582
             GR P++V L +L E+ LV++LTEP+NA+  QY+ LFSM+  +L+ T  ALR IA+ A  +
Sbjct:   475 GRLPVVVPLHSLDEETLVRILTEPRNAVVPQYQALFSMDKCELNMTPDALRAIARLALER 534

Query:   583 NTGARGLRAILESILTEAMYEIP 605
              TGARGLR+I+E +L + M+E+P
Sbjct:   535 KTGARGLRSIMEKLLLDPMFEVP 557

 Score = 149 (57.5 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
 Identities = 30/44 (68%), Positives = 36/44 (81%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
             P PK+I   LDK+V+GQ+ AKKVLSVAVYNHYKRIY+ N+  GS
Sbjct:   156 PPPKKIFAYLDKYVVGQDHAKKVLSVAVYNHYKRIYN-NMPAGS 198


>TIGR_CMR|CJE_0324 [details] [associations]
            symbol:CJE_0324 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:195099 "Campylobacter jejuni RM1221"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
            Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
            EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111 GO:GO:0008233
            InterPro:IPR025943 PROSITE:PS00676 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 RefSeq:YP_178344.1 ProteinModelPortal:Q5HWJ1
            SMR:Q5HWJ1 STRING:Q5HWJ1 GeneID:3231086 KEGG:cjr:CJE0324
            PATRIC:20042350 BioCyc:CJEJ195099:GJC0-329-MONOMER Uniprot:Q5HWJ1
        Length = 407

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 175/346 (50%), Positives = 245/346 (70%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVE 322
             TPKE+   LD++VIGQ++AKKV SV VYNHYKR++ A L+               DD+ E
Sbjct:    62 TPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQ---------------DDDTE 106

Query:   323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
             L KSN+LL+GPTGSGKTLLA+TLA+ ++VP  I DAT+LT+AGYVGEDVE+IL +LL  A
Sbjct:   107 LFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTRLLQAA 166

Query:   383 EFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARK 442
             + +V+ AQ+G+V+IDE+DKI + +E+ +I+RDVSGEGVQQALLK++EG++VN+P KG RK
Sbjct:   167 DGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVNIPPKGGRK 226

Query:   443 HPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAXXXX 502
             HP  + IQ+DT +ILF+CGGAF  LE  +  +  D  +GF    +   +A          
Sbjct:   227 HPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKA---------- 276

Query:   503 XXXXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNN 562
                     DL+ +GLIPE +GR  ++ SL  L E+ +V++LTEPKNA+ KQY++LF+++ 
Sbjct:   277 LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAIDG 336

Query:   563 VKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 608
             V L F E ALR IA+ A  + TGARGLR+I+E ++ + M+E+P+ K
Sbjct:   337 VNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYK 382


>WB|WBGene00008412 [details] [associations]
            symbol:D2030.2 species:6239 "Caenorhabditis elegans"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0006457
            "protein folding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
            GeneTree:ENSGT00390000017625 HSSP:O25926 EMBL:Z73906 OMA:QMASSEL
            PIR:T20353 RefSeq:NP_001021076.1 ProteinModelPortal:P90788
            SMR:P90788 STRING:P90788 PaxDb:P90788 PRIDE:P90788
            EnsemblMetazoa:D2030.2a.1 EnsemblMetazoa:D2030.2a.2
            EnsemblMetazoa:D2030.2a.3 GeneID:172511 KEGG:cel:CELE_D2030.2
            UCSC:D2030.2a.1 CTD:172511 WormBase:D2030.2a InParanoid:P90788
            NextBio:875833 ArrayExpress:P90788 Uniprot:P90788
        Length = 586

 Score = 663 (238.4 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
 Identities = 142/305 (46%), Positives = 196/305 (64%)

Query:   307 AEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
             A P   A  + + +V LEKSNVLL+GP+G GKT L +TLAR ++VP  + D T++TQAGY
Sbjct:   239 AAPTFRALPEKEQSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGY 298

Query:   367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS-RDVSGEGVQQALL 425
             VGEDVES++ KL+  A  NVE AQQG+V++DEVDKI    E  + + RDVSGEGVQ ALL
Sbjct:   299 VGEDVESVIQKLVQAAGGNVEKAQQGIVFLDEVDKIAAAHEGHSAAYRDVSGEGVQHALL 358

Query:   426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
             K++EGT+VNV         + D +Q+DT DILFI  GAF +L+K +  R    ++GFG  
Sbjct:   359 KLVEGTVVNVKSGKKGMGSQQDQVQIDTTDILFIASGAFSNLDKIVGRRLDKKALGFGTS 418

Query:   486 VRANMRAGVTDAAXXXXXX-----XXXXXXDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
                N+R    D+                  DLI++G++PE VGRFP+LV   +  +  LV
Sbjct:   419 -SGNVRISGDDSNSEVMRKRDELLSKADQGDLISFGMVPELVGRFPVLVPFHSFDKQMLV 477

Query:   541 KVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEA 600
             +V+TEP+N+L  Q K  F ++NV L F+ +AL  +A+ A  + TGAR LR+ILE+ L EA
Sbjct:   478 RVMTEPQNSLLAQLKLQFGIDNVDLSFSAEALEQVAQLALDRKTGARALRSILEAALLEA 537

Query:   601 MYEIP 605
              + +P
Sbjct:   538 KFTVP 542

 Score = 133 (51.9 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
 Identities = 26/52 (50%), Positives = 38/52 (73%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
             P P +I + LDKFV+GQ+KAKK L+V VY HY+R+ H N++ G+ +  +T A
Sbjct:   128 PYPTQIAEYLDKFVVGQKKAKKTLAVGVYQHYRRLEH-NIETGASSIYQTHA 178


>SGD|S000000431 [details] [associations]
            symbol:MCX1 "Mitochondrial matrix protein" species:4932
            "Saccharomyces cerevisiae" [GO:0005759 "mitochondrial matrix"
            evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0042026 "protein refolding" evidence=IMP]
            [GO:0006457 "protein folding" evidence=IEA] [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            SGD:S000000431 GO:GO:0005524 GO:GO:0005759 EMBL:BK006936
            GO:GO:0017111 GO:GO:0042026 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625 EMBL:Z36096
            PIR:S46103 RefSeq:NP_009786.1 ProteinModelPortal:P38323 SMR:P38323
            DIP:DIP-6422N IntAct:P38323 MINT:MINT-4477678 STRING:P38323
            PaxDb:P38323 EnsemblFungi:YBR227C GeneID:852528 KEGG:sce:YBR227C
            CYGD:YBR227c OMA:QMASSEL OrthoDB:EOG4FXVH6 NextBio:971574
            Genevestigator:P38323 GermOnline:YBR227C Uniprot:P38323
        Length = 520

 Score = 395 (144.1 bits), Expect = 1.1e-71, Sum P(3) = 1.1e-71
 Identities = 86/171 (50%), Positives = 120/171 (70%)

Query:   318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
             D+++EL KSNVL++GP+GSGKTLLA TLA+ +NVP  I D T LTQAGY+GEDVE  + +
Sbjct:   126 DEDLELSKSNVLVVGPSGSGKTLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIER 185

Query:   378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
             LL  AEF+V  A++G++ +DE+DK+ K A S+  ++DVSGEGVQQ+LLK++EG  V +  
Sbjct:   186 LLVNAEFDVARAEKGIIVLDEIDKLAKPAASIG-TKDVSGEGVQQSLLKIIEGHKVEITV 244

Query:   438 KGARKHP----------RGDSI-QMDTKDILFICGGAFVDLEKTISERRQD 477
             K   KH           + D +  +DT +ILF+  GAFV L+K I +R +D
Sbjct:   245 KRPVKHDIDGQKNQTTTKKDEVFVVDTSNILFMIMGAFVGLDKHIVKRIED 295

 Score = 228 (85.3 bits), Expect = 1.1e-71, Sum P(3) = 1.1e-71
 Identities = 45/95 (47%), Positives = 63/95 (66%)

Query:   511 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEK 570
             DL+++GLIPE +GR PI+ +L  L  D L  +L EPKNAL  QY+ +F    V+L  T+K
Sbjct:   349 DLVSFGLIPELIGRVPIITALQPLQRDDLFHILKEPKNALLDQYEYIFKQFGVRLCVTQK 408

Query:   571 ALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 605
             AL+ +A+ A  + TGARGLR I+E +L    Y+ P
Sbjct:   409 ALKKVAQFALKEGTGARGLRGIMERLLLNVNYDCP 443

 Score = 133 (51.9 bits), Expect = 1.1e-71, Sum P(3) = 1.1e-71
 Identities = 27/45 (60%), Positives = 35/45 (77%)

Query:   260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
             ++PTPK + K LD++++GQE  KKVLSVAVYNHY RI +   KKG
Sbjct:    35 NIPTPKALKKFLDEYIVGQEIGKKVLSVAVYNHYLRI-NDKQKKG 78


>FB|FBgn0038745 [details] [associations]
            symbol:CG4538 species:7227 "Drosophila melanogaster"
            [GO:0005739 "mitochondrion" evidence=ISS] [GO:0009368
            "endopeptidase Clp complex" evidence=ISS] [GO:0004252 "serine-type
            endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
            evidence=ISS] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0051082 "unfolded
            protein binding" evidence=IEA] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            EMBL:AE014297 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
            GeneTree:ENSGT00390000017625 HSSP:O25926 RefSeq:NP_732463.1
            UniGene:Dm.2399 ProteinModelPortal:Q8IN64 SMR:Q8IN64 STRING:Q8IN64
            PaxDb:Q8IN64 PRIDE:Q8IN64 EnsemblMetazoa:FBtr0083856 GeneID:42369
            KEGG:dme:Dmel_CG4538 UCSC:CG4538-RB FlyBase:FBgn0038745
            InParanoid:Q8IN64 OrthoDB:EOG4RBP0W GenomeRNAi:42369 NextBio:828465
            ArrayExpress:Q8IN64 Bgee:Q8IN64 Uniprot:Q8IN64
        Length = 673

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 147/313 (46%), Positives = 210/313 (67%)

Query:   303 KGSGAEPKTAAAVDNDD-NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTL 361
             +G G     +  +D    +V+LEKSN++++GPTGSGKTL+A+T+A+ ++VPF I D TTL
Sbjct:   304 RGGGDNRSGSEILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTL 363

Query:   362 TQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQ 421
             TQAGYVGED+ES++ KLL  A +NVE AQ G+V++DEVDKI      ++  RDV GEGVQ
Sbjct:   364 TQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDEVDKIGA-VPGIHQLRDVGGEGVQ 422

Query:   422 QALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIG 481
             Q +LKMLEGT+VNVPE+ + +  RG+++Q+DT +ILF+  GA+  L++ I+ R  +  +G
Sbjct:   423 QGMLKMLEGTVVNVPERNSPRKLRGETVQVDTTNILFVASGAYTGLDRLIARRLNEKYLG 482

Query:   482 FGAPV------RANMRAGV---TDAAXXXXXXXXXXXXDLIAYGLIPEFVGRFPILVSLT 532
             FG P       RA   A      D              DL+ +G+IPEFVGRFP++V   
Sbjct:   483 FGMPSTSGSGRRAAQSAASPMDNDQEERDKCLTKVQARDLVEFGMIPEFVGRFPVIVPFH 542

Query:   533 ALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAI 592
             +L    LV++LTEP+NAL  QYK L  ++ V L FTE A++ IA+ A  ++TGARGLR+I
Sbjct:   543 SLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGARGLRSI 602

Query:   593 LESILTEAMYEIP 605
             +E +L + M+ +P
Sbjct:   603 MEQLLLDPMFIVP 615

 Score = 142 (55.0 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 37/83 (44%), Positives = 52/83 (62%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANL----KKGSGAEPKTAAAVDN 317
             P P++I + LDK V+GQ+ AKKVL+VAVYNHYKRI+H NL     +G+GA       +D 
Sbjct:   190 PPPQKIMEYLDKHVVGQDFAKKVLAVAVYNHYKRIHH-NLPQLQNQGAGASNGAGGGLDG 248

Query:   318 DDNVELEKSNVLLMGPTGSGKTL 340
                  + + ++L +  TG G TL
Sbjct:   249 -----IPRPDLLHI--TGIGHTL 264


>WB|WBGene00019461 [details] [associations]
            symbol:K07A3.3 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 PANTHER:PTHR11262:SF4
            GeneTree:ENSGT00390000017625 EMBL:FO080962 GeneID:171817
            KEGG:cel:CELE_K07A3.3 CTD:171817 RefSeq:NP_001021562.1
            ProteinModelPortal:Q65XY4 SMR:Q65XY4 STRING:Q65XY4 PRIDE:Q65XY4
            EnsemblMetazoa:K07A3.3b UCSC:K07A3.3b WormBase:K07A3.3b
            InParanoid:Q65XY4 OMA:PFHCLDK NextBio:872825 ArrayExpress:Q65XY4
            Uniprot:Q65XY4
        Length = 518

 Score = 562 (202.9 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
 Identities = 126/303 (41%), Positives = 188/303 (62%)

Query:   323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
             L+KSN++L+G +G+GKT + + LA  ++VP VI D TTLTQAGYVG+DV++++ KLLA+A
Sbjct:   192 LDKSNMILLGASGTGKTFMTQKLAEVLDVPIVICDCTTLTQAGYVGDDVDTVIQKLLAEA 251

Query:   383 EFNVEAAQQGMVYIDEVDKITKKAESLNIS--RDVSGEGVQQALLKMLEGTIVNVPEKGA 440
               ++E  Q+G+V++DE DKI   ++ L+ S  RDVSG+GVQQALLK++EG++V V +  A
Sbjct:   252 MGDIEKCQRGIVFLDEFDKIYTSSDPLHTSGNRDVSGKGVQQALLKLVEGSLVKVRDPLA 311

Query:   441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAXX 500
                P    + +DT +ILFI  GAF ++E  ++ R    S+GF +    + + G  D    
Sbjct:   312 ---PNS-KVTIDTSNILFIASGAFSNIEHIVARRMDKRSLGFLSATSPH-KLGDQDTTEK 366

Query:   501 XXXXXXXXXX-------------DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPK 547
                                    DLI++G+IPE VGRFP++V    L +  L+ VLTEP+
Sbjct:   367 LRDSDEEIVSKARNEMIKQCDQGDLISFGMIPELVGRFPVIVPFHCLDKTHLMSVLTEPR 426

Query:   548 NALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP-- 605
              +L  Q K+ F   NV+L F+  A+  IA+ A  + TGAR L++I+E  +  A YE+P  
Sbjct:   427 GSLIAQTKKFFENENVELRFSPAAIEAIAEMAVKRKTGARALKSIVEKAVMNAKYEVPGS 486

Query:   606 DVK 608
             DVK
Sbjct:   487 DVK 489

 Score = 120 (47.3 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
 Identities = 23/39 (58%), Positives = 33/39 (84%)

Query:   264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLK 302
             PKEI + L+K+V+GQE+AKK L+VAVY HY+R+ + NL+
Sbjct:   101 PKEIVEHLNKYVVGQEEAKKYLAVAVYQHYRRVEN-NLR 138


>ASPGD|ASPL0000057717 [details] [associations]
            symbol:AN0349 species:162425 "Emericella nidulans"
            [GO:0042026 "protein refolding" evidence=IEA] [GO:0005759
            "mitochondrial matrix" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
            GO:GO:0006457 EMBL:BN001308 GO:GO:0006508 GO:GO:0017111
            GO:GO:0008233 EMBL:AACD01000006 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            PANTHER:PTHR11262:SF4 OrthoDB:EOG4FXVH6 RefSeq:XP_657953.1
            ProteinModelPortal:Q5BGI1 STRING:Q5BGI1
            EnsemblFungi:CADANIAT00002357 GeneID:2876125 KEGG:ani:AN0349.2
            OMA:DAMFETP Uniprot:Q5BGI1
        Length = 630

 Score = 348 (127.6 bits), Expect = 1.8e-57, Sum P(3) = 1.8e-57
 Identities = 67/133 (50%), Positives = 97/133 (72%)

Query:   313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
             A +D    +++EKSNVLL+GP+G GKTL+ ++LAR ++VPF I+D T  TQAGY+G+D E
Sbjct:   188 AEIDESSQLQIEKSNVLLLGPSGVGKTLMCRSLARVLSVPFSISDCTPFTQAGYIGDDAE 247

Query:   373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
               +++LLA A ++VE A++G++ +DE+DKI   A  ++  RDV G GVQ++LLK+LEGT 
Sbjct:   248 VCVHRLLAAANYDVEQAERGIIVLDEIDKIA--AAKVSHGRDVGGSGVQESLLKLLEGTT 305

Query:   433 VNVPEKGARKHPR 445
             V V  K  R  PR
Sbjct:   306 VQVQAKQERSAPR 318

 Score = 239 (89.2 bits), Expect = 1.8e-57, Sum P(3) = 1.8e-57
 Identities = 48/95 (50%), Positives = 66/95 (69%)

Query:   511 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEK 570
             DL  YG IPE VGR P+  +L+AL++  LV++LTEP+N+L  QY  LFS++ ++L FT  
Sbjct:   456 DLQNYGFIPELVGRIPVNAALSALSQPLLVRILTEPRNSLVAQYTTLFSLSGIELRFTTP 515

Query:   571 ALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 605
             AL  IA  A    TGAR LR  +E+IL++AM+E P
Sbjct:   516 ALHKIAANAFTMGTGARALRTEMETILSDAMFETP 550

 Score = 137 (53.3 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
 Identities = 30/74 (40%), Positives = 45/74 (60%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVE 322
             TPK + + LD+FV+GQE+AKK+LSVAVYNHY+R+     ++   AE   A  +  +D   
Sbjct:    80 TPKSLKQYLDQFVVGQERAKKILSVAVYNHYQRVQELQ-RRQEEAEQLLAKRLRREDIQR 138

Query:   323 LEKSNVLLMGPTGS 336
              ++    L+G   S
Sbjct:   139 RQEEREELLGKHAS 152

 Score = 108 (43.1 bits), Expect = 1.8e-57, Sum P(3) = 1.8e-57
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query:   436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR 487
             P  G     +G+   + T +ILFIC GAF  L K + +R    S+GFG PVR
Sbjct:   340 PPGGGNVPHKGEVYNVRTDNILFICSGAFAGLHKVVMDRISRGSMGFGQPVR 391


>UNIPROTKB|Q9KNQ7 [details] [associations]
            symbol:hslU "ATP-dependent protease ATPase subunit HslU"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
            activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
            Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0006200 GO:GO:0006508 GO:GO:0016887
            GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1220 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
            GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
            TIGRFAMs:TIGR00390 PIR:E82046 RefSeq:NP_232302.1
            ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7 DNASU:2615502 GeneID:2615502
            KEGG:vch:VC2674 PATRIC:20084366 Uniprot:Q9KNQ7
        Length = 443

 Score = 162 (62.1 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
 Identities = 37/92 (40%), Positives = 52/92 (56%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             LIPE  GR PI V L AL+ +   ++LTEPK +L +QY  L     V + FTE  ++ IA
Sbjct:   318 LIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQVDVQFTEDGIKQIA 377

Query:   577 KKA-----TAKNTGARGLRAILESILTEAMYE 603
               A     T +N GAR L  +LE ++ E  ++
Sbjct:   378 DAAWQVNETTENIGARRLHTVLERLMDEISFD 409

 Score = 159 (61.0 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
 Identities = 30/58 (51%), Positives = 43/58 (74%)

Query:   321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
             VE+   N+L++GPTG GKT +A+ LA+  NVPF+  +AT  T+ GYVG++VESI+  L
Sbjct:    46 VEVTPKNILMIGPTGVGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDL 103

 Score = 126 (49.4 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
 Identities = 39/88 (44%), Positives = 51/88 (57%)

Query:   377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
             +L  QA +NVE    G+V+IDE+DKI K+ E      DVS EGVQ+ LL ++EG+ V+  
Sbjct:   238 ELKEQAIYNVE--NNGIVFIDEIDKICKRGEVSG--PDVSREGVQRDLLPLIEGSTVST- 292

Query:   437 EKGARKHPRGDSIQMDTKDILFICGGAF 464
                  KH  G    + T  ILFI  GAF
Sbjct:   293 -----KH--G---MVRTDHILFIASGAF 310

 Score = 86 (35.3 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
 Identities = 14/34 (41%), Positives = 27/34 (79%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
             TP+EI   L++ +IGQ+KAK+ +++A+ N ++R+
Sbjct:     5 TPREIVSELNRHIIGQDKAKRAVAIALRNRWRRM 38


>TIGR_CMR|VC_2674 [details] [associations]
            symbol:VC_2674 "protease HslVU, ATPase subunit HslU"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006508
            "proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
            evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
            SMART:SM00382 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0006200 GO:GO:0006508 GO:GO:0016887 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
            KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
            GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:E82046
            RefSeq:NP_232302.1 ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7
            DNASU:2615502 GeneID:2615502 KEGG:vch:VC2674 PATRIC:20084366
            Uniprot:Q9KNQ7
        Length = 443

 Score = 162 (62.1 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
 Identities = 37/92 (40%), Positives = 52/92 (56%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             LIPE  GR PI V L AL+ +   ++LTEPK +L +QY  L     V + FTE  ++ IA
Sbjct:   318 LIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQVDVQFTEDGIKQIA 377

Query:   577 KKA-----TAKNTGARGLRAILESILTEAMYE 603
               A     T +N GAR L  +LE ++ E  ++
Sbjct:   378 DAAWQVNETTENIGARRLHTVLERLMDEISFD 409

 Score = 159 (61.0 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
 Identities = 30/58 (51%), Positives = 43/58 (74%)

Query:   321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
             VE+   N+L++GPTG GKT +A+ LA+  NVPF+  +AT  T+ GYVG++VESI+  L
Sbjct:    46 VEVTPKNILMIGPTGVGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDL 103

 Score = 126 (49.4 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
 Identities = 39/88 (44%), Positives = 51/88 (57%)

Query:   377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
             +L  QA +NVE    G+V+IDE+DKI K+ E      DVS EGVQ+ LL ++EG+ V+  
Sbjct:   238 ELKEQAIYNVE--NNGIVFIDEIDKICKRGEVSG--PDVSREGVQRDLLPLIEGSTVST- 292

Query:   437 EKGARKHPRGDSIQMDTKDILFICGGAF 464
                  KH  G    + T  ILFI  GAF
Sbjct:   293 -----KH--G---MVRTDHILFIASGAF 310

 Score = 86 (35.3 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
 Identities = 14/34 (41%), Positives = 27/34 (79%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
             TP+EI   L++ +IGQ+KAK+ +++A+ N ++R+
Sbjct:     5 TPREIVSELNRHIIGQDKAKRAVAIALRNRWRRM 38


>TIGR_CMR|SO_4163 [details] [associations]
            symbol:SO_4163 "heat shock protein HslVU, ATPase subunit
            HslU" species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
            binding" evidence=ISS] [GO:0009376 "HslUV protease complex"
            evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
            SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
            KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
            GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
            RefSeq:NP_719692.1 ProteinModelPortal:Q8E9U9 SMR:Q8E9U9
            GeneID:1171770 KEGG:son:SO_4163 PATRIC:23527956 Uniprot:Q8E9U9
        Length = 440

 Score = 169 (64.5 bits), Expect = 7.9e-34, Sum P(4) = 7.9e-34
 Identities = 39/95 (41%), Positives = 52/95 (54%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             LIPE  GR PI V L ALT D   ++LTEP  +L +QY  L +   V + FTE  +  IA
Sbjct:   315 LIPELQGRLPIRVELDALTADDFKRILTEPHASLTEQYIALMATEGVIIEFTESGIESIA 374

Query:   577 KKA-----TAKNTGARGLRAILESILTEAMYEIPD 606
             K A       +N GAR L  ++E ++ +  YE  D
Sbjct:   375 KAAWQVNERTENIGARRLHTVMEKLMEDISYEASD 409

 Score = 153 (58.9 bits), Expect = 7.9e-34, Sum P(4) = 7.9e-34
 Identities = 29/64 (45%), Positives = 43/64 (67%)

Query:   315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
             +D D   E+   N+L++GPTG GKT +A+ LA+  N PF+  +AT  T+ GYVG++VE I
Sbjct:    40 LDADFRQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVEQI 99

Query:   375 LYKL 378
             +  L
Sbjct:   100 IRDL 103

 Score = 118 (46.6 bits), Expect = 7.9e-34, Sum P(4) = 7.9e-34
 Identities = 38/98 (38%), Positives = 52/98 (53%)

Query:   371 VESILYKLLAQAEFNVEAA----QQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
             +E    KL+ Q +   +A     Q G+V++DE+DKI K+ E+     DVS EGVQ+ LL 
Sbjct:   223 IEEEAAKLVNQEDLKEQAIELVEQNGIVFLDEIDKICKRGETSG--PDVSREGVQRDLLP 280

Query:   427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAF 464
             ++EG  V        KH  G    + T  ILFI  GAF
Sbjct:   281 LVEGCTVTT------KH--G---MVKTDHILFIASGAF 307

 Score = 85 (35.0 bits), Expect = 7.9e-34, Sum P(4) = 7.9e-34
 Identities = 16/34 (47%), Positives = 26/34 (76%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
             TP+EI   LD  +IGQ+KAK+ ++VA+ N ++R+
Sbjct:     5 TPREIVHELDAHIIGQKKAKRSVAVALRNRWRRM 38


>TIGR_CMR|CBU_2012 [details] [associations]
            symbol:CBU_2012 "heat shock protein HslVU, ATPase subunit
            HslU" species:227377 "Coxiella burnetii RSA 493" [GO:0016887
            "ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
            Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
            GO:GO:0016887 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
            HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
            GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
            TIGRFAMs:TIGR00390 RefSeq:NP_820987.2 ProteinModelPortal:Q83A94
            SMR:Q83A94 PRIDE:Q83A94 GeneID:1209925 KEGG:cbu:CBU_2012
            PATRIC:17932769 BioCyc:CBUR227377:GJ7S-1986-MONOMER Uniprot:Q83A94
        Length = 447

 Score = 182 (69.1 bits), Expect = 1.4e-33, Sum P(4) = 1.4e-33
 Identities = 41/95 (43%), Positives = 56/95 (58%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             L+PE  GRFPI V L ALT D  V++LTEPK +L +QY  L    N  L FT+  ++ +A
Sbjct:   322 LVPELQGRFPIRVELKALTADDFVRILTEPKASLTEQYTELLKTENFGLSFTKDGIKRLA 381

Query:   577 KKA-----TAKNTGARGLRAILESILTEAMYEIPD 606
             + A      ++N GAR L  I+E +L E  +E  D
Sbjct:   382 EIAYQVNDRSENIGARRLHTIMERLLEEVSFEATD 416

 Score = 138 (53.6 bits), Expect = 1.4e-33, Sum P(4) = 1.4e-33
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
             E+   N+L++GPTG GKT +A+ L+     PF+  +AT  T+ GYVG DVESI+  L+
Sbjct:    46 EIFPKNILMIGPTGVGKTEIARRLSDLAGAPFLKIEATKFTEVGYVGRDVESIIRDLV 103

 Score = 109 (43.4 bits), Expect = 1.4e-33, Sum P(4) = 1.4e-33
 Identities = 32/75 (42%), Positives = 43/75 (57%)

Query:   390 QQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSI 449
             Q G+V+IDE+DKI K+  +  +  DVS EGVQ+ LL ++EG+ V   + G  K       
Sbjct:   253 QNGIVFIDEIDKIVKREGA--VGADVSREGVQRDLLPLVEGSTV-FTKYGMVK------- 302

Query:   450 QMDTKDILFICGGAF 464
                T  ILFI  GAF
Sbjct:   303 ---TDHILFIASGAF 314

 Score = 92 (37.4 bits), Expect = 1.4e-33, Sum P(4) = 1.4e-33
 Identities = 16/34 (47%), Positives = 26/34 (76%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
             TP+EI   LDKF+IGQ  AK+ +++A+ N ++R+
Sbjct:     4 TPREIVAELDKFIIGQNDAKRAVAIALRNRWRRM 37

 Score = 44 (20.5 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query:     9 RQLSDIASSSMLPSSRTRFT 28
             R+LSD+A +  L    T+FT
Sbjct:    67 RRLSDLAGAPFLKIEATKFT 86


>TIGR_CMR|CHY_1790 [details] [associations]
            symbol:CHY_1790 "heat shock protein HslVU, ATPase subunit
            HslU" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_00249
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
            InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
            GO:GO:0005524 GO:GO:0006950 EMBL:CP000141 GenomeReviews:CP000141_GR
            GO:GO:0006200 GO:GO:0016887 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
            OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
            PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_360610.1
            ProteinModelPortal:Q3AB74 SMR:Q3AB74 STRING:Q3AB74 GeneID:3728442
            KEGG:chy:CHY_1790 PATRIC:21276691
            BioCyc:CHYD246194:GJCN-1789-MONOMER Uniprot:Q3AB74
        Length = 461

 Score = 186 (70.5 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
 Identities = 44/96 (45%), Positives = 56/96 (58%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             LIPE  GRFPI V L +LT +   K+LT P+NAL KQY  L +   V L FTE +L  IA
Sbjct:   336 LIPELQGRFPIRVELKSLTVEDFKKILTVPENALTKQYVELLATEGVNLKFTEDSLEEIA 395

Query:   577 KKATA-----KNTGARGLRAILESILTEAMYEIPDV 607
             K A       +N GAR L  ILE +L +  +  P++
Sbjct:   396 KMAYTVNERNENIGARRLITILEKVLEDLSFNAPEM 431

 Score = 151 (58.2 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
 Identities = 44/150 (29%), Positives = 76/150 (50%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
             E+   N+L++GPTG GKT +A+ LA+ +  PFV  +AT  T+ GYVG DVE ++  L   
Sbjct:    47 EIIPKNILMIGPTGVGKTEIARRLAKLIKAPFVKVEATKFTEVGYVGRDVEGMIRDL--- 103

Query:   382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISR--DVSGEGVQQALLKM-LEGTIVNVPEK 438
                 VE + + MV  +++  +  KA +L + R  ++     ++  +K   E     + E 
Sbjct:   104 ----VETSLR-MVREEKIKMVEDKAYNLAVERLSEIMIPNPKKENIKNPFEMFFGGIRED 158

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLE 468
              A+  P  D +    +++       F+D E
Sbjct:   159 AAKTDPAYDELNYRRRELQDKIKKGFLDNE 188

 Score = 101 (40.6 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
 Identities = 20/37 (54%), Positives = 30/37 (81%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
             E+L TP++I + LDK++IGQE AKK ++VA+ N Y+R
Sbjct:     2 ENL-TPRQIVEYLDKYIIGQEAAKKAVAVALRNRYRR 37

 Score = 89 (36.4 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
 Identities = 30/84 (35%), Positives = 43/84 (51%)

Query:   381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
             Q E    A + G+V++DE+DKI     +     DVS  GVQ+ +L ++EG+ V + + G 
Sbjct:   258 QREAIKRAEEDGIVFLDEIDKIASTGNTHG--PDVSRGGVQRDILPIVEGSTV-LTKYGP 314

Query:   441 RKHPRGDSIQMDTKDILFICGGAF 464
              K          T  ILFI  GAF
Sbjct:   315 VK----------TDHILFIAAGAF 328


>TIGR_CMR|CJE_0764 [details] [associations]
            symbol:CJE_0764 "heat shock protein HslVU, ATPase subunit
            HslU" species:195099 "Campylobacter jejuni RM1221" [GO:0016887
            "ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
            InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            GO:GO:0005524 GO:GO:0006200 GO:GO:0016887 EMBL:CP000025
            GenomeReviews:CP000025_GR InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 RefSeq:YP_178773.1 ProteinModelPortal:Q5HVB2
            SMR:Q5HVB2 STRING:Q5HVB2 GeneID:3230716 KEGG:cjr:CJE0764
            PATRIC:20043261 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
            OMA:KYGMIKT ProtClustDB:PRK05201 BioCyc:CJEJ195099:GJC0-780-MONOMER
            GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
            TIGRFAMs:TIGR00390 Uniprot:Q5HVB2
        Length = 439

 Score = 177 (67.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
 Identities = 38/92 (41%), Positives = 57/92 (61%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             LIPE  GRFP+ V L +L +  L ++LT PKN+L KQY +L    N++L F ++A++ IA
Sbjct:   314 LIPELQGRFPLRVELDSLDDKALYEILTRPKNSLLKQYSQLLKTENLELEFNDEAIKEIA 373

Query:   577 KKATAKNT-----GARGLRAILESILTEAMYE 603
             K A+  N      GAR L  ++E +L +  +E
Sbjct:   374 KIASRANEEMQDIGARRLHTVIEKLLEDLSFE 405

 Score = 138 (53.6 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
 Identities = 29/80 (36%), Positives = 51/80 (63%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
             ++   N+L++G TG GKT +A+ LA+ +  PF+  +A+  T+ G+VG DVES++ + LA 
Sbjct:    46 DIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMV-RDLAN 104

Query:   382 AEFNVEAAQQGMVYIDEVDK 401
             A  N+   +Q     D++D+
Sbjct:   105 AALNLVKNEQREKNKDKIDE 124

 Score = 111 (44.1 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
 Identities = 20/34 (58%), Positives = 29/34 (85%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
             TPKEI K LD +VIGQ+KAKK++++A+ N Y+R+
Sbjct:     4 TPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRM 37

 Score = 108 (43.1 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
 Identities = 44/122 (36%), Positives = 61/122 (50%)

Query:   346 ARHVNVPFVIADATTL--TQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKIT 403
             ++ V     I DA      +AG    D ESI  + L +AE       +G+++IDE+DKI 
Sbjct:   204 SKKVKKEMKIKDAKNALKNEAGEKILDQESIKSEALKRAE------NEGIIFIDEIDKIA 257

Query:   404 KKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK-GARKHPRGDSIQMDTKDILFICGG 462
               + + N  +D S EGVQ+ LL ++EG+  NV  K G  K          T  ILFI  G
Sbjct:   258 VSSGNSN-RQDPSKEGVQRDLLPIVEGS--NVQTKIGTLK----------TDHILFIAAG 304

Query:   463 AF 464
             AF
Sbjct:   305 AF 306


>UNIPROTKB|P0A6H5 [details] [associations]
            symbol:hslU species:83333 "Escherichia coli K-12"
            [GO:0009408 "response to heat" evidence=IEP] [GO:0070011 "peptidase
            activity, acting on L-amino acid peptides" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0009376 "HslUV
            protease complex" evidence=IEA] [GO:0042802 "identical protein
            binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
            evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] HAMAP:MF_00249 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
            Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
            EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR GO:GO:0006200 GO:GO:0016887 GO:GO:0009408
            EMBL:L19201 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
            ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
            PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:JT0761
            RefSeq:NP_418366.1 RefSeq:YP_491520.1 PDB:1DO0 PDB:1DO2 PDB:1E94
            PDB:1G4A PDB:1G4B PDB:1HQY PDB:1HT1 PDB:1HT2 PDB:1YYF PDBsum:1DO0
            PDBsum:1DO2 PDBsum:1E94 PDBsum:1G4A PDBsum:1G4B PDBsum:1HQY
            PDBsum:1HT1 PDBsum:1HT2 PDBsum:1YYF ProteinModelPortal:P0A6H5
            SMR:P0A6H5 DIP:DIP-31855N IntAct:P0A6H5 SWISS-2DPAGE:P0A6H5
            PaxDb:P0A6H5 PRIDE:P0A6H5 EnsemblBacteria:EBESCT00000003987
            EnsemblBacteria:EBESCT00000018172 GeneID:12932793 GeneID:948430
            KEGG:ecj:Y75_p3256 KEGG:eco:b3931 PATRIC:32123377 EchoBASE:EB1827
            EcoGene:EG11881 BioCyc:EcoCyc:EG11881-MONOMER
            BioCyc:ECOL316407:JW3902-MONOMER EvolutionaryTrace:P0A6H5
            Genevestigator:P0A6H5 Uniprot:P0A6H5
        Length = 443

 Score = 170 (64.9 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26
 Identities = 63/245 (25%), Positives = 112/245 (45%)

Query:   381 QAEFNVEAAQQGMVYIDE--VDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
             + E ++ AA  G+  +    ++++T + +S+   +++ G+  +   LK+ +   + + E+
Sbjct:   172 EIEIDLAAAPMGVEIMAPPGMEEMTSQLQSM--FQNLGGQKQKARKLKIKDAMKLLIEEE 229

Query:   439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP-VRANMRAGVTDA 497
              A K    + ++ D  D +   G  F+D    I +R + S        V+ ++   V   
Sbjct:   230 AA-KLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGC 288

Query:   498 AXXXXXXXXXXXXDL-IAYG---------LIPEFVGRFPILVSLTALTEDQLVKVLTEPK 547
                           L IA G         LIPE  GR PI V L ALT     ++LTEP 
Sbjct:   289 TVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPN 348

Query:   548 NALGKQYKRLFSMNNVKLHFTEKALRVIAKKA-----TAKNTGARGLRAILESILTEAMY 602
              ++  QYK L +   V + FT+  ++ IA+ A     + +N GAR L  +LE ++ E  Y
Sbjct:   349 ASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISY 408

Query:   603 EIPDV 607
             +  D+
Sbjct:   409 DASDL 413

 Score = 155 (59.6 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26
 Identities = 35/88 (39%), Positives = 55/88 (62%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
             E+   N+L++GPTG GKT +A+ LA+  N PF+  +AT  T+ GYVG++V+SI+  L   
Sbjct:    47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL--- 103

Query:   382 AEFNVEAAQQGMVYIDEVDKITKKAESL 409
                  +AA + MV +  ++K   +AE L
Sbjct:   104 ----TDAAVK-MVRVQAIEKNRYRAEEL 126

 Score = 87 (35.7 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26
 Identities = 15/34 (44%), Positives = 26/34 (76%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
             TP+EI   LDK +IGQ+ AK+ +++A+ N ++R+
Sbjct:     5 TPREIVSELDKHIIGQDNAKRSVAIALRNRWRRM 38


>TIGR_CMR|SPO_3882 [details] [associations]
            symbol:SPO_3882 "heat shock protein HslVU, ATPase subunit
            HslU" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016887 "ATPase
            activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
            Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0006200 GO:GO:0016887
            InterPro:IPR019489 SMART:SM01086 eggNOG:COG1220
            HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
            GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
            TIGRFAMs:TIGR00390 RefSeq:YP_169070.1 ProteinModelPortal:Q5LLP0
            SMR:Q5LLP0 GeneID:3196200 KEGG:sil:SPO3882 PATRIC:23381271
            Uniprot:Q5LLP0
        Length = 435

 Score = 164 (62.8 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
 Identities = 38/95 (40%), Positives = 51/95 (53%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             L+PE  GR PI V L ALTE+  V++LTE  NAL  QY  L    NV + FT   +  +A
Sbjct:   310 LLPELQGRLPIRVELRALTEEDFVRILTETDNALTLQYTALMGTENVAVTFTPDGIAALA 369

Query:   577 KKA-----TAKNTGARGLRAILESILTEAMYEIPD 606
               A     + +N GAR L  ++E +  E  +  PD
Sbjct:   370 HIAAEVNQSVENIGARRLYTVMERVFEELSFTAPD 404

 Score = 152 (58.6 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
 Identities = 39/107 (36%), Positives = 59/107 (55%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
             E+   N+L++GPTG GKT +++ LA+    PF+  +AT  T+ GYVG DVE I+ + LA 
Sbjct:    47 EVYPKNILMIGPTGVGKTEISRRLAKLARAPFIKVEATKFTEVGYVGRDVEQII-RDLAD 105

Query:   382 AEFNVEAAQQGMVYI-DEVDKITKKAESLNISRDVSGEGVQQALLKM 427
             A     A  Q   Y+ DEV     KA    +   ++GE  ++   +M
Sbjct:   106 A-----AIVQTRDYMRDEVRARAHKAAEDRVITAIAGEDAREGTREM 147

 Score = 120 (47.3 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
 Identities = 36/99 (36%), Positives = 57/99 (57%)

Query:   367 VGEDVESILYKLLAQAEFNVEAAQQ-GMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
             +GE+ + +L   L   +  +EA +Q G+V++DE+DK+  ++++     DVS EGVQ+ LL
Sbjct:   218 IGEEADKLLDDELVN-KTALEAVEQNGIVFLDEIDKVCARSDARGA--DVSREGVQRDLL 274

Query:   426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAF 464
              ++EGT V+  + G  K          T  ILFI  GAF
Sbjct:   275 PLIEGTTVST-KYGPIK----------TDHILFIASGAF 302

 Score = 92 (37.4 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
 Identities = 18/36 (50%), Positives = 28/36 (77%)

Query:   260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
             DL TP+EI   LD+F+IGQ+ AK+ ++VA+ N ++R
Sbjct:     3 DL-TPREIVSELDRFIIGQKDAKRAVAVALRNRWRR 37


>TIGR_CMR|CPS_4370 [details] [associations]
            symbol:CPS_4370 "heat shock protein HslVU, ATPase subunit
            HslU" species:167879 "Colwellia psychrerythraea 34H" [GO:0016887
            "ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
            Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
            GO:GO:0006200 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P0A6H5
            eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
            ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
            PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_271019.1
            ProteinModelPortal:Q47W03 SMR:Q47W03 STRING:Q47W03 GeneID:3518888
            KEGG:cps:CPS_4370 PATRIC:21471585
            BioCyc:CPSY167879:GI48-4379-MONOMER Uniprot:Q47W03
        Length = 443

 Score = 165 (63.1 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
 Identities = 66/242 (27%), Positives = 108/242 (44%)

Query:   381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
             + E ++ A Q G+  +         ++  N+ +++S E   +  LK ++  +  + E+ A
Sbjct:   171 EIELDLAAPQVGVEIMAPPGMEDMTSQLQNMFQNMSSEKTNKRKLK-IKDALKALQEEEA 229

Query:   441 RKHPRGDSIQMDTKDILFICGGAFVD-LEKTISERRQDSSIGFGAPVRANMRAGVTDAAX 499
              K    D I+    D +   G  F+D ++K    +R DSS G G   R  ++  +     
Sbjct:   230 AKIVNQDDIKQKAIDAVEQNGIVFIDEIDKIC--KRADSS-GGGDVSREGVQRDLLPLVE 286

Query:   500 XXXXXXXXXX--XD---LIAYG---------LIPEFVGRFPILVSLTALTEDQLVKVLTE 545
                          D    IA G         LIPE  GR PI V L ALT D  V++LTE
Sbjct:   287 GSTVSTKHGMIKTDHILFIASGAFQMTKPSDLIPELQGRLPIRVELQALTADDFVRILTE 346

Query:   546 PKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKA-----TAKNTGARGLRAILESILTEA 600
             P  +L +QY  L +   V + FT+  ++ IA  A     T +N GAR L  ++E ++ + 
Sbjct:   347 PFASLTEQYIALLATEGVSVTFTDDGIKAIADSAWQVNETTENIGARRLHTMMERLVEDL 406

Query:   601 MY 602
              +
Sbjct:   407 SF 408

 Score = 153 (58.9 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
 Identities = 35/93 (37%), Positives = 57/93 (61%)

Query:   315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
             +D D   E+   N+L++GPTG GKT +A+ LA+  + PF+  +AT  T+ GYVG++VE+I
Sbjct:    40 LDKDLRNEVTPKNILMIGPTGVGKTEIARRLAKLAHAPFIKVEATKFTEVGYVGKEVETI 99

Query:   375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAE 407
             +  L   A+  ++     MV   E+D++   AE
Sbjct:   100 IRDL---ADMAIK-----MVKESEMDRVKHLAE 124

 Score = 79 (32.9 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
 Identities = 13/34 (38%), Positives = 24/34 (70%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
             TP+EI   LD  ++GQ  AK+ +++A+ N ++R+
Sbjct:     5 TPREIVHELDSHIVGQSDAKRAVAIALRNRWRRM 38


>TIGR_CMR|ECH_0997 [details] [associations]
            symbol:ECH_0997 "heat shock protein HslVU, ATPase subunit
            HslU" species:205920 "Ehrlichia chaffeensis str. Arkansas"
            [GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
            Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
            EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006200 GO:GO:0016887
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
            HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
            GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
            TIGRFAMs:TIGR00390 RefSeq:YP_507784.1 ProteinModelPortal:Q2GFJ9
            SMR:Q2GFJ9 STRING:Q2GFJ9 GeneID:3927521 KEGG:ech:ECH_0997
            PATRIC:20577368 BioCyc:ECHA205920:GJNR-1000-MONOMER Uniprot:Q2GFJ9
        Length = 487

 Score = 170 (64.9 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             L+PE  GR PI V L  L++D LV++LTEP+++L KQY  L    N+ + FT++ +  IA
Sbjct:   362 LLPELQGRLPIRVELKPLSKDDLVRILTEPESSLLKQYCALMKTENITIDFTDEGVSTIA 421

Query:   577 KKATA-----KNTGARGLRAILESILTEAMY 602
             + A+      +N GAR L  ILE ++ +  Y
Sbjct:   422 EIASTVNREVENIGARRLHTILEKLMEDISY 452

 Score = 142 (55.0 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
 Identities = 34/101 (33%), Positives = 58/101 (57%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
             E+   N+L++G TG GKT +A+ LA+    PF+  +AT  T+ GYVG DV+SI+  L+  
Sbjct:    98 EIIPKNILMIGHTGIGKTEIARRLAKLAKAPFIKVEATKFTEIGYVGRDVDSIIRDLVDV 157

Query:   382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQ 422
             A  N+E  ++   +++   K    AE++ +   V  +  Q+
Sbjct:   158 A-INLEK-EKSRKFVET--KAKSLAENIILEALVGADASQE 194

 Score = 105 (42.0 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
 Identities = 31/77 (40%), Positives = 43/77 (55%)

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A+  G+V++DE+DKI  + E   I  +V+ EGVQ+ LL +LEGT V   + G        
Sbjct:   292 ASNDGIVFLDEIDKIAARTE---IRGEVNREGVQRDLLPLLEGTSVTT-KYGT------- 340

Query:   448 SIQMDTKDILFICGGAF 464
                + T  ILFI  GAF
Sbjct:   341 ---ITTDHILFIASGAF 354

 Score = 85 (35.0 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
 Identities = 14/33 (42%), Positives = 26/33 (78%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
             TP++I + LD+F+IGQ  AK+ +++A+ N ++R
Sbjct:    56 TPQQITQELDRFIIGQADAKRAVAIALRNRWRR 88


>DICTYBASE|DDB_G0288593 [details] [associations]
            symbol:DDB_G0288593 "ATP-dependent hsl protease
            ATP-binding subunit hslU" species:44689 "Dictyostelium discoideum"
            [GO:0070011 "peptidase activity, acting on L-amino acid peptides"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR003593
            InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            dictyBase:DDB_G0288593 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
            EMBL:AAFI02000117 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1220 KO:K03667 GO:GO:0009376 GO:GO:0070011
            PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:XP_636662.1
            ProteinModelPortal:Q54IQ2 SMR:Q54IQ2 STRING:Q54IQ2
            EnsemblProtists:DDB0188012 GeneID:8626708 KEGG:ddi:DDB_G0288593
            InParanoid:Q54IQ2 OMA:IAFEANA Uniprot:Q54IQ2
        Length = 694

 Score = 160 (61.4 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
 Identities = 38/112 (33%), Positives = 66/112 (58%)

Query:   327 NVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNV 386
             N+L++GPTG GKT LA+ LA+ +N PFV  +AT  T+ G+ G DV++I+  L+  +  N+
Sbjct:   316 NILMIGPTGVGKTELARRLAKIINAPFVKVEATKYTEVGFHGPDVDTIIRDLIEASISNI 375

Query:   387 EA--AQQGMVYID-EVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
             +   A      I+ +V+K    +  + +  D+S   +++ L K  EG + +V
Sbjct:   376 KTKIANSHKASIEADVEK-NVISSLIGLQNDLSAITIEELLKKYREGQLDSV 426

 Score = 146 (56.5 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
 Identities = 36/91 (39%), Positives = 49/91 (53%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             LI E  GR PI V L  L +    K+LTEPKN   +Q K L    +++L FT+ AL  +A
Sbjct:   569 LISELQGRLPIRVELKPLEQKDFYKILTEPKNNQIQQQKALLKTEDIQLEFTDDALLEVA 628

Query:   577 K-----KATAKNTGARGLRAILESILTEAMY 602
             K      A  +N GAR L  I+E I+ +  +
Sbjct:   629 KIAFEANAQVQNLGARRLHGIIERIVEDISF 659

 Score = 130 (50.8 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
 Identities = 49/150 (32%), Positives = 77/150 (51%)

Query:   319 DNVELE-KSNVLLMGPTGSG-KTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
             D+VE+E + +    G  G      +AK L+     P  I   T + +A  + E     LY
Sbjct:   424 DSVEIEIEVSSDSKGSLGQAYDENIAKLLSAIDKQPSKIKKVT-IAEAKEIFEKQYRDLY 482

Query:   377 KLLAQA-EFNVEAAQQ-GMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
              +     +  +++A+Q G+V++DE+DKI    ES+    D S +GVQ+ LL ++EG +V+
Sbjct:   483 TVSQDVTKLAIQSAEQNGIVFLDEIDKICTSRESIKNGGDASTDGVQRDLLPIVEGCMVS 542

Query:   435 VPEKGARKHPRGDSIQMDTKDILFICGGAF 464
                    K+  G   Q+DT  ILFI  GAF
Sbjct:   543 T------KY--G---QIDTSRILFIASGAF 561

 Score = 94 (38.1 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query:   259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
             ED   P++I  GLD++VIGQ  AK+ +S+A+ N ++R
Sbjct:   265 EDNLLPRDIVSGLDEYVIGQSDAKRAISIALRNRWRR 301

 Score = 37 (18.1 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query:   528 LVSLTALTEDQLVKV-LTEPKNALGKQYKRLFSMN 561
             L+S       ++ KV + E K    KQY+ L++++
Sbjct:   451 LLSAIDKQPSKIKKVTIAEAKEIFEKQYRDLYTVS 485


>TIGR_CMR|NSE_0177 [details] [associations]
            symbol:NSE_0177 "heat shock protein HslVU, ATPase subunit
            HslU" species:222891 "Neorickettsia sennetsu str. Miyayama"
            [GO:0006508 "proteolysis" evidence=ISS] [GO:0009376 "HslUV protease
            complex" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
            InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
            GO:GO:0005524 GO:GO:0006950 GO:GO:0006200 GO:GO:0016887
            EMBL:CP000237 GenomeReviews:CP000237_GR InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
            KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
            GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
            RefSeq:YP_506072.1 ProteinModelPortal:Q2GEM4 SMR:Q2GEM4
            STRING:Q2GEM4 GeneID:3931406 KEGG:nse:NSE_0177 PATRIC:22680453
            BioCyc:NSEN222891:GHFU-208-MONOMER Uniprot:Q2GEM4
        Length = 472

 Score = 161 (61.7 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
 Identities = 37/95 (38%), Positives = 55/95 (57%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             L+PE  GR PI V L +L  + ++++LTE +++L KQY  L     V L FT+  +R IA
Sbjct:   347 LLPELQGRLPIRVELDSLDVEDMIRILTETESSLLKQYCALLETEGVSLEFTKDGVRAIA 406

Query:   577 KKATA-----KNTGARGLRAILESILTEAMYEIPD 606
             + A       +N GAR L  I+E++L E  +E  D
Sbjct:   407 EAAITVNNEVENIGARRLHTIMETLLEEINFEAND 441

 Score = 148 (57.2 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
 Identities = 32/84 (38%), Positives = 51/84 (60%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
             E+   N+L++GPTG GKT +A+ +A+    PF+  +AT  T+ GYVG DVESI+  L+  
Sbjct:    70 EIIPKNILMIGPTGVGKTEIARRVAKLSGAPFIKVEATKFTEVGYVGRDVESIIRDLVDS 129

Query:   382 AEFNVEAAQQGMVYIDEVDKITKK 405
             A   V+  Q+   +  E ++  K+
Sbjct:   130 AVAQVKD-QKRKQFSKEAEESAKE 152

 Score = 107 (42.7 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
 Identities = 32/74 (43%), Positives = 43/74 (58%)

Query:   391 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQ 450
             +GMV+IDE+DKI  + E   +  +V+ EGVQ+ LL +LEGT V V + G  K        
Sbjct:   280 RGMVFIDEIDKICARTE---VRGEVNREGVQRDLLPLLEGTTV-VTKYGVVK-------- 327

Query:   451 MDTKDILFICGGAF 464
               T  ILF+  GAF
Sbjct:   328 --TDHILFVGSGAF 339

 Score = 82 (33.9 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
 Identities = 14/32 (43%), Positives = 24/32 (75%)

Query:   264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
             PK +   LD+FV+GQ+ AKK +++A+ N ++R
Sbjct:    29 PKALVSYLDRFVVGQKLAKKKIAIAIRNRWRR 60


>UNIPROTKB|P43773 [details] [associations]
            symbol:hslU "ATP-dependent protease ATPase subunit HslU"
            species:71421 "Haemophilus influenzae Rd KW20" [GO:0005515 "protein
            binding" evidence=IPI] HAMAP:MF_00249 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
            Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
            GO:GO:0016887 EMBL:L42023 GenomeReviews:L42023_GR
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
            KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
            GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
            RefSeq:NP_438655.1 PDB:1G3I PDB:1G41 PDB:1IM2 PDB:1KYI PDB:1OFH
            PDB:1OFI PDBsum:1G3I PDBsum:1G41 PDBsum:1IM2 PDBsum:1KYI
            PDBsum:1OFH PDBsum:1OFI ProteinModelPortal:P43773 SMR:P43773
            DIP:DIP-6175N IntAct:P43773 GeneID:950614 KEGG:hin:HI0497
            PATRIC:20189545 EvolutionaryTrace:P43773 Uniprot:P43773
        Length = 444

 Score = 156 (60.0 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
 Identities = 36/96 (37%), Positives = 54/96 (56%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             LIPE  GR PI V LTAL+     ++LTEP  +L +QYK L +   V + FT  A++ IA
Sbjct:   319 LIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIA 378

Query:   577 KKA-----TAKNTGARGLRAILESILTEAMYEIPDV 607
             + A       +N GAR L  ++E ++ +  +   D+
Sbjct:   379 EAAFRVNEKTENIGARRLHTVMERLMDKISFSASDM 414

 Score = 151 (58.2 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
 Identities = 48/154 (31%), Positives = 80/154 (51%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
             E+   N+L++GPTG GKT +A+ LA+  N PF+  +AT  T+ GYVG++V+SI+  L   
Sbjct:    47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL--- 103

Query:   382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL---KMLEGTIVNVPEK 438
                  ++A + +V   E+ K   +AE      DV+ E +  ALL   K   G + N    
Sbjct:   104 ----TDSAMK-LVRQQEIAKNRARAE------DVAEERILDALLPPAKNQWGEVENHDSH 152

Query:   439 GARKHPRGDSI---QMDTKDI-LFICGGAFVDLE 468
              + +      +   Q+D K+I + +  G  + +E
Sbjct:   153 SSTRQAFRKKLREGQLDDKEIEIDVSAGVSMGVE 186

 Score = 122 (48.0 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
 Identities = 36/80 (45%), Positives = 48/80 (60%)

Query:   386 VEAAQQ-GMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHP 444
             ++A +Q G+V+IDE+DKI KK E      DVS EGVQ+ LL ++EG+ V+       KH 
Sbjct:   245 IDAVEQNGIVFIDEIDKICKKGEYSGA--DVSREGVQRDLLPLVEGSTVST------KH- 295

Query:   445 RGDSIQMDTKDILFICGGAF 464
              G    + T  ILFI  GAF
Sbjct:   296 -G---MVKTDHILFIASGAF 311

 Score = 81 (33.6 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
 Identities = 14/34 (41%), Positives = 25/34 (73%)

Query:   263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
             TP+EI   LD+ +IGQ  AK+ +++A+ N ++R+
Sbjct:     5 TPREIVSELDQHIIGQADAKRAVAIALRNRWRRM 38


>TIGR_CMR|APH_1074 [details] [associations]
            symbol:APH_1074 "ATP-dependent Hsl protease, ATP-binding
            subunit HslU" species:212042 "Anaplasma phagocytophilum HZ"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
            SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0006508
            GO:GO:0016887 EMBL:CP000235 GenomeReviews:CP000235_GR
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
            HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
            GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
            TIGRFAMs:TIGR00390 RefSeq:YP_505627.1 ProteinModelPortal:Q2GJ24
            SMR:Q2GJ24 STRING:Q2GJ24 GeneID:3931122 KEGG:aph:APH_1074
            PATRIC:20950902 BioCyc:APHA212042:GHPM-1080-MONOMER Uniprot:Q2GJ24
        Length = 437

 Score = 161 (61.7 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
 Identities = 37/91 (40%), Positives = 52/91 (57%)

Query:   517 LIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIA 576
             L+PE  GR PI V L  L+ D LV++LTEP+  L KQY+ L     V + FTE  +  IA
Sbjct:   312 LLPELQGRLPIRVELQPLSRDDLVRILTEPEANLLKQYRALLETEGVTVEFTEDGIFAIA 371

Query:   577 KKATA-----KNTGARGLRAILESILTEAMY 602
             + A+      +N GAR L  I+E ++ +  Y
Sbjct:   372 EIASTVNREVENIGARRLHTIMEKLMEDISY 402

 Score = 139 (54.0 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
 Identities = 29/73 (39%), Positives = 46/73 (63%)

Query:   322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
             E+   N+L++G TG GKT +A+ LA+    PF+  +AT  T+ GYVG DV+SI+  L+ +
Sbjct:    47 EIIPKNILMIGHTGVGKTEIARRLAKLAQAPFIKVEATKFTEIGYVGRDVDSIMRDLVDR 106

Query:   382 AEFNVEAAQQGMV 394
             A   V+   + +V
Sbjct:   107 AVLLVKEKYRKVV 119

 Score = 111 (44.1 bits), Expect = 9.8e-20, Sum P(3) = 9.8e-20
 Identities = 36/111 (32%), Positives = 64/111 (57%)

Query:   358 ATTLTQAGYV--GEDVESILY--KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISR 413
             +TT+ +A  +   E+ E ++   K++ +A  ++ A+ +G+V++DE+DKI  + E   +  
Sbjct:   210 STTVKEAREILLDEETEKLIDEDKIVREA-LHI-ASNEGIVFLDEIDKIAARTE---VRG 264

Query:   414 DVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAF 464
             +V+ EGVQ+ LL +LEGT V+  + G           + T  +LFI  GAF
Sbjct:   265 EVNREGVQRDLLPLLEGTSVST-KYGT----------VTTDHVLFIASGAF 304

 Score = 80 (33.2 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
 Identities = 15/36 (41%), Positives = 28/36 (77%)

Query:   260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
             DL +PK+I K LD+F++GQ +AK+ ++ A+ + ++R
Sbjct:     3 DL-SPKQITKELDRFIVGQTEAKRAVANALRSRWRR 37


>UNIPROTKB|H0YM48 [details] [associations]
            symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
            clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006457 "protein folding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            InterPro:IPR004487 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 EMBL:AC068213 PANTHER:PTHR11262:SF4 HGNC:HGNC:2088
            EMBL:AC013553 ProteinModelPortal:H0YM48 SMR:H0YM48
            Ensembl:ENST00000559152 Bgee:H0YM48 Uniprot:H0YM48
        Length = 268

 Score = 151 (58.2 bits), Expect = 5.0e-08, P = 5.0e-08
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query:   262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
             P PK+I   LDK+V+GQ  AKKVLSVAVYNHYKRIY+   ANL++ +  E +T+
Sbjct:   167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220


>TIGR_CMR|CHY_2164 [details] [associations]
            symbol:CHY_2164 "ATPase, AAA family" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0019538 "protein metabolic process"
            evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
            eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
            ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
            KEGG:chy:CHY_2164 PATRIC:21277395
            BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
        Length = 411

 Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 32/91 (35%), Positives = 55/91 (60%)

Query:   327 NVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNV 386
             N++L GP G+GKT  A+T+A+   +PF + +A+ +  +G +    E  L +L A    N 
Sbjct:   195 NIILYGPPGNGKTNFARTVAQAYGLPFFVVNASAIISSGQLVGAAEKTLLELFA----NA 250

Query:   387 EAAQQGMVYIDEVDKITKK--AESLNISRDV 415
             +A +  +++ DE+D I KK  AE+LN + D+
Sbjct:   251 KALRPAIIFFDEIDAIAKKRRAETLNSASDI 281


>UNIPROTKB|I3LI39 [details] [associations]
            symbol:I3LI39 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008568
            "microtubule-severing ATPase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
            GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00570000078874
            Ensembl:ENSSSCT00000029727 OMA:QARECAP Uniprot:I3LI39
        Length = 160

 Score = 121 (47.7 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 31/78 (39%), Positives = 44/78 (56%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKT+LAK +A   N  F    A +LT   YVGE  E ++  L A A     
Sbjct:    50 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 103

Query:   388 AAQQGMVYIDEVDKITKK 405
               Q  +++IDEVD + ++
Sbjct:   104 ELQPSIIFIDEVDSLLRE 121


>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
            symbol:psmc4 "proteasome (prosome, macropain) 26S
            subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
            Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
            GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
            UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
            PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
            Uniprot:Q7SXX0
        Length = 418

 Score = 129 (50.5 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 43/150 (28%), Positives = 66/150 (44%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   NV  K      R D
Sbjct:   260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

Query:   448 SIQMDTKDILFICGGAFV-DLEKTISERRQ 476
             ++     D   +C G     +E  + +RRQ
Sbjct:   316 TL-----DPALLCPGRLDRKIEFPLPDRRQ 340


>POMBASE|SPBC23G7.12c [details] [associations]
            symbol:rpt6 "19S proteasome regulatory subunit Rpt6
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
            "endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
            evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
            "nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
            cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
            base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
            evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
            GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
            OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
            ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
            EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
            OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
        Length = 403

 Score = 127 (49.8 bits), Expect = 6.9e-05, P = 6.9e-05
 Identities = 34/108 (31%), Positives = 57/108 (52%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   +LL GP G+GKTLLA+ +A H +  F+    + L Q  Y+GE    ++ +L   A 
Sbjct:   178 QPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 235

Query:   384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 430
                E A   ++++DE+D I + +++S   S D   +     LL  L+G
Sbjct:   236 ---EHAPS-IIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDG 279


>DICTYBASE|DDB_G0289003 [details] [associations]
            symbol:psmC4 "HIV TAT binding-protein-related"
            species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
            vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
            evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
            "proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
            particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
            "proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
            evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
            GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
            eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
            PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
            STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
            GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
            GO:GO:0005838 Uniprot:P34123
        Length = 403

 Score = 126 (49.4 bits), Expect = 9.0e-05, P = 9.0e-05
 Identities = 37/122 (30%), Positives = 58/122 (47%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G+GKT+LAK +A H +  F+    +   Q  Y+GE    ++  +   A  N  
Sbjct:   187 VLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQK-YLGEGPR-LVRDVFRLARENSP 244

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G  V+V  K      R D
Sbjct:   245 A----IIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQD 300

Query:   448 SI 449
             ++
Sbjct:   301 TL 302


>ZFIN|ZDB-GENE-050522-514 [details] [associations]
            symbol:katna1 "katanin p60 (ATPase-containing)
            subunit A 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
            [GO:0031122 "cytoplasmic microtubule organization" evidence=IMP]
            [GO:0048675 "axon extension" evidence=IGI;IMP] [GO:0030496
            "midbody" evidence=ISS] [GO:0000922 "spindle pole" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005819 "spindle"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005856
            "cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
            [GO:0005815 "microtubule organizing center" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-050522-514
            GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
            GO:GO:0005815 HSSP:Q01853 eggNOG:COG0464 GO:GO:0008568
            InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
            GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0048676 EMBL:BX255904
            KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
            GeneTree:ENSGT00550000074466 CTD:11104 OrthoDB:EOG4CJVGZ
            EMBL:BC095321 IPI:IPI00500630 RefSeq:NP_001018440.1
            UniGene:Dr.78566 ProteinModelPortal:Q5RII9
            Ensembl:ENSDART00000043316 GeneID:553631 KEGG:dre:553631
            InParanoid:Q5RII9 OMA:IMERDIL NextBio:20880368 Bgee:Q5RII9
            Uniprot:Q5RII9
        Length = 485

 Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
 Identities = 40/114 (35%), Positives = 56/114 (49%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL++GP G+GKTLLAK +A      F    ++TLT   Y GE  E ++  L   A F   
Sbjct:   240 VLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYAP 297

Query:   388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
                   ++IDE+D I  +   +E    SR V  E + Q  +  + GT  N P K
Sbjct:   298 TT----IFIDEIDSICSRRGTSEEHEASRRVKAELLVQ--MDGVGGTSENDPSK 345


>TAIR|locus:2147670 [details] [associations]
            symbol:RPT6A "regulatory particle triple-A ATPase 6A"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
            complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
            GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
            eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
            EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
            IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
            ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
            PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
            KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
            OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
        Length = 419

 Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 35/108 (32%), Positives = 57/108 (52%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  Y+GE    ++ +L   A 
Sbjct:   194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 251

Query:   384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 430
                E A   ++++DE+D I + + ES + + D   +     LL  L+G
Sbjct:   252 ---EHAPS-IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295

 Score = 44 (20.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query:   557 LFSMNNVKLHFT----EKALRVIAKKATAKNTGARGL 589
             +F++   ++H T    E A+  + KK T KN   R L
Sbjct:   381 MFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKL 417


>TAIR|locus:2147685 [details] [associations]
            symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
            complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
            GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
            EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
            IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
            ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
            PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
            KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
            OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
        Length = 419

 Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 35/108 (32%), Positives = 57/108 (52%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  Y+GE    ++ +L   A 
Sbjct:   194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 251

Query:   384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 430
                E A   ++++DE+D I + + ES + + D   +     LL  L+G
Sbjct:   252 ---EHAPS-IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295

 Score = 44 (20.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query:   557 LFSMNNVKLHFT----EKALRVIAKKATAKNTGARGL 589
             +F++   ++H T    E A+  + KK T KN   R L
Sbjct:   381 MFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKL 417


>DICTYBASE|DDB_G0292382 [details] [associations]
            symbol:psmC5 "HIV TAT binding-protein-related"
            species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=ISS] [GO:0005838 "proteasome regulatory particle"
            evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
            complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
            GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
            GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
            ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
            GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
            ProtClustDB:CLSZ2429412 Uniprot:P34124
        Length = 403

 Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 35/108 (32%), Positives = 56/108 (51%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  Y+GE    ++ +L   A 
Sbjct:   178 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFIMAR 235

Query:   384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 430
                E A   ++++DE+D I + + ES +   D   +     LL  L+G
Sbjct:   236 ---EHAPS-IIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDG 279


>UNIPROTKB|F1S7T6 [details] [associations]
            symbol:KATNA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
            GO:GO:0008104 GO:GO:0005811 GO:GO:0030424 GO:GO:0008568
            GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
            GO:GO:0000922 GO:GO:0031122 GeneTree:ENSGT00550000074466
            GO:GO:0051329 EMBL:CU915504 Ensembl:ENSSSCT00000004539 OMA:YHGESER
            Uniprot:F1S7T6
        Length = 263

 Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
 Identities = 35/94 (37%), Positives = 48/94 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL++GP G+GKTLLAK +A      F    ++TLT   Y GE  E ++  L   A F   
Sbjct:    17 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 74

Query:   388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
             A     ++IDE+D I  +   +E    SR V  E
Sbjct:    75 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 104


>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
            symbol:PFL1925w "cell division protein FtsH,
            putative" species:5833 "Plasmodium falciparum" [GO:0004176
            "ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
            InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
            PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
            GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
            GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
            HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
            ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
            MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
            GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
            ProtClustDB:CLSZ2433071 Uniprot:Q8I526
        Length = 880

 Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
 Identities = 44/139 (31%), Positives = 67/139 (48%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL+GP GSGKT+LA+ +A   NVP++        +  YVG+  + I  +L A A     
Sbjct:   185 VLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI-YVGQGAKRIR-QLFAHAR---- 238

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPR-- 445
             +    +V+IDE+D I  K  S      V+G G Q+   + L   +V +       H    
Sbjct:   239 SVAPSIVFIDEIDAIGGKRSS----GSVNGAG-QREHDQTLNQLLVEMDGFSNTVHIMVI 293

Query:   446 GDSIQMDTKDILFICGGAF 464
             G + ++DT D   +  G F
Sbjct:   294 GATNRIDTLDSALLRPGRF 312


>UNIPROTKB|Q8I526 [details] [associations]
            symbol:PFL1925w "Cell division protein FtsH, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004176
            "ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
            InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
            PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
            GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
            GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
            HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
            ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
            MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
            GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
            ProtClustDB:CLSZ2433071 Uniprot:Q8I526
        Length = 880

 Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
 Identities = 44/139 (31%), Positives = 67/139 (48%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL+GP GSGKT+LA+ +A   NVP++        +  YVG+  + I  +L A A     
Sbjct:   185 VLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI-YVGQGAKRIR-QLFAHAR---- 238

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPR-- 445
             +    +V+IDE+D I  K  S      V+G G Q+   + L   +V +       H    
Sbjct:   239 SVAPSIVFIDEIDAIGGKRSS----GSVNGAG-QREHDQTLNQLLVEMDGFSNTVHIMVI 293

Query:   446 GDSIQMDTKDILFICGGAF 464
             G + ++DT D   +  G F
Sbjct:   294 GATNRIDTLDSALLRPGRF 312


>UNIPROTKB|Q5ZK92 [details] [associations]
            symbol:SPAST "Spastin" species:9031 "Gallus gallus"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
            evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
            [GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
            "alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
            binding" evidence=ISS] [GO:0034214 "protein hexamerization"
            evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
            [GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
            "microtubule bundle formation" evidence=ISS] InterPro:IPR007330
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
            SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
            GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
            eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
            GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
            GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
            KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
            OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
            IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
            UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
            STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
            NextBio:20824244 Uniprot:Q5ZK92
        Length = 613

 Score = 119 (46.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
 Identities = 31/75 (41%), Positives = 42/75 (56%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKT+LAK +A   N  F    A +LT   YVGE  E ++  L A A     
Sbjct:   375 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 428

Query:   388 AAQQGMVYIDEVDKI 402
               Q  +++IDEVD +
Sbjct:   429 ELQPSIIFIDEVDSL 443

 Score = 51 (23.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query:    93 SNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
             ++PS  +P  PAP    +G   A    P+ ++ YYF
Sbjct:    25 ASPS--APSGPAPPAPPAGAAAAAAASPHKRNLYYF 58

 Score = 41 (19.5 bits), Expect = 0.00022, Sum P(3) = 0.00022
 Identities = 17/52 (32%), Positives = 21/52 (40%)

Query:   289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTG-SG 337
             VYN    +   N  L+  SGA PK    + +  N       V   G TG SG
Sbjct:   208 VYNDSTNLACRNGHLQSESGAVPKKKDPLTHTSNSLPRSKTVAKTGSTGLSG 259


>UNIPROTKB|F1NG80 [details] [associations]
            symbol:SPATA5L1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
            EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
            Uniprot:F1NG80
        Length = 748

 Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
 Identities = 41/125 (32%), Positives = 59/125 (47%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP+G  KT L K +A   +  F+      L    YVG D E IL ++  QA  N  
Sbjct:   500 VLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSP-YVG-DSEKILSQVFRQARANTP 557

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    ++++DE+D I            VS E V   LL  L+G  + V E+      RG+
Sbjct:   558 A----IIFLDEIDSILGSRSHSKSGHGVS-ERVLSVLLNELDGVGLKVTER------RGN 606

Query:   448 SIQMD 452
              +Q++
Sbjct:   607 KLQLE 611


>TIGR_CMR|CJE_1085 [details] [associations]
            symbol:CJE_1085 "cell division protein FtsH, putative"
            species:195099 "Campylobacter jejuni RM1221" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
            activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
            eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
            RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
            STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
            OMA:HRSDERE ProtClustDB:CLSK2395802
            BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
        Length = 538

 Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
 Identities = 32/95 (33%), Positives = 54/95 (56%)

Query:   321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
             V++ K  VL++GP G GKTL+AK +A    VPF     ++  +  YVG   + +  +L +
Sbjct:   182 VKMPKG-VLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEI-YVGMGAKRVR-ELFS 238

Query:   381 QAEFNVEAAQQGMVYIDEVDKITK-KAESLNISRD 414
             +A+    +    +V+IDE+D + K + E  N+ RD
Sbjct:   239 KAKMMAPS----IVFIDEIDAVGKARGEMSNVERD 269


>UNIPROTKB|F1MG70 [details] [associations]
            symbol:PSMC4 "26S protease regulatory subunit 6B"
            species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
            complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
            IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
            Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
        Length = 417

 Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 36/122 (29%), Positives = 55/122 (45%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   201 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 258

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   NV  K      R D
Sbjct:   259 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 314

Query:   448 SI 449
             ++
Sbjct:   315 TL 316


>UNIPROTKB|Q3T030 [details] [associations]
            symbol:PSMC4 "26S protease regulatory subunit 6B"
            species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
            complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
            RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
            SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
            CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
            ArrayExpress:Q3T030 Uniprot:Q3T030
        Length = 418

 Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 36/122 (29%), Positives = 55/122 (45%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   NV  K      R D
Sbjct:   260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

Query:   448 SI 449
             ++
Sbjct:   316 TL 317


>UNIPROTKB|E2RH48 [details] [associations]
            symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0022624 "proteasome accessory complex"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
            OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
            RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
            PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
            KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
        Length = 418

 Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 36/122 (29%), Positives = 55/122 (45%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   NV  K      R D
Sbjct:   260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

Query:   448 SI 449
             ++
Sbjct:   316 TL 317


>UNIPROTKB|P43686 [details] [associations]
            symbol:PSMC4 "26S protease regulatory subunit 6B"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
            complex" evidence=ISS] [GO:0000502 "proteasome complex"
            evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
            "ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
            [GO:0006521 "regulation of cellular amino acid metabolic process"
            evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
            [GO:0006977 "DNA damage response, signal transduction by p53 class
            mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
            "anaphase-promoting complex-dependent proteasomal
            ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0034641 "cellular nitrogen compound metabolic process"
            evidence=TAS] [GO:0042590 "antigen processing and presentation of
            exogenous peptide antigen via MHC class I" evidence=TAS]
            [GO:0042981 "regulation of apoptotic process" evidence=TAS]
            [GO:0044281 "small molecule metabolic process" evidence=TAS]
            [GO:0051436 "negative regulation of ubiquitin-protein ligase
            activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
            "positive regulation of ubiquitin-protein ligase activity involved
            in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
            ubiquitin-protein ligase activity involved in mitotic cell cycle"
            evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
            [GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
            [GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
            [GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
            "M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
            "mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
            and presentation of peptide antigen via MHC class I" evidence=TAS]
            [GO:0002479 "antigen processing and presentation of exogenous
            peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0006200 "ATP catabolic process" evidence=TAS]
            Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
            Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
            Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
            GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
            GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
            GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
            GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
            GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
            EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
            OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
            EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
            IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
            RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
            ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
            MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
            OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
            Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
            KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
            HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
            neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
            PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
            GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
            CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
            Uniprot:P43686
        Length = 418

 Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 36/122 (29%), Positives = 55/122 (45%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   NV  K      R D
Sbjct:   260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

Query:   448 SI 449
             ++
Sbjct:   316 TL 317


>UNIPROTKB|Q4R7L3 [details] [associations]
            symbol:PSMC4 "26S protease regulatory subunit 6B"
            species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
            accessory complex" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
            ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
        Length = 418

 Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 36/122 (29%), Positives = 55/122 (45%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   NV  K      R D
Sbjct:   260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

Query:   448 SI 449
             ++
Sbjct:   316 TL 317


>MGI|MGI:1346093 [details] [associations]
            symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
            ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
            "proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
            catabolic process" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
            OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
            EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
            EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
            UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
            SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
            REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
            Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
            InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
            Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
            Uniprot:P54775
        Length = 418

 Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 36/122 (29%), Positives = 55/122 (45%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   NV  K      R D
Sbjct:   260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

Query:   448 SI 449
             ++
Sbjct:   316 TL 317


>RGD|621102 [details] [associations]
            symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
            ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
            "blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
            [GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
            accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
            process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
            GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
            OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
            EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
            UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
            SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
            PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
            KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
            EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
            GermOnline:ENSRNOG00000018994 Uniprot:Q63570
        Length = 418

 Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 36/122 (29%), Positives = 55/122 (45%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   NV  K      R D
Sbjct:   260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

Query:   448 SI 449
             ++
Sbjct:   316 TL 317


>UNIPROTKB|I3LLQ8 [details] [associations]
            symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
            "myelination" evidence=IEA] [GO:0042407 "cristae formation"
            evidence=IEA] [GO:0040014 "regulation of multicellular organism
            growth" evidence=IEA] [GO:0034982 "mitochondrial protein
            processing" evidence=IEA] [GO:0021675 "nerve development"
            evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
            "mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
            junction development" evidence=IEA] [GO:0007409 "axonogenesis"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
            activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
            GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
            GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
            GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
            TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
            GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
            Uniprot:I3LLQ8
        Length = 597

 Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
 Identities = 37/120 (30%), Positives = 54/120 (45%)

Query:   318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
             D   ++ K   +L GP G+GKTLLAK  A   NVPF+    +   +  +VG     +   
Sbjct:   126 DLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM-FVGVGPARVR-D 183

Query:   378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG--TIVNV 435
             L A A  N       +++IDE+D + +K    N       E     LL  ++G  T  NV
Sbjct:   184 LFALARKNAPC----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNV 239


>UNIPROTKB|A2VDN5 [details] [associations]
            symbol:SPAST "Spastin" species:9913 "Bos taurus"
            [GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0007109
            "cytokinesis, completion of separation" evidence=ISS] [GO:0001578
            "microtubule bundle formation" evidence=ISS] [GO:0051260 "protein
            homooligomerization" evidence=ISS] [GO:0051013 "microtubule
            severing" evidence=ISS] [GO:0034214 "protein hexamerization"
            evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
            evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
            [GO:0043014 "alpha-tubulin binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
            [GO:0030496 "midbody" evidence=ISS] [GO:0015630 "microtubule
            cytoskeleton" evidence=ISS] [GO:0008017 "microtubule binding"
            evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
            evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
            "microtubule organizing center" evidence=IEA] [GO:0031410
            "cytoplasmic vesicle" evidence=IEA] [GO:0005874 "microtubule"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
            PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
            GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
            GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
            GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
            eggNOG:COG0464 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
            GO:GO:0048487 GO:GO:0008017 GO:GO:0008568 GO:GO:0001578
            GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
            GO:GO:0034214 GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146
            KO:K13254 HAMAP:MF_03021 EMBL:BC133327 IPI:IPI00840116
            RefSeq:NP_001075060.1 UniGene:Bt.46123 ProteinModelPortal:A2VDN5
            SMR:A2VDN5 STRING:A2VDN5 Ensembl:ENSBTAT00000046919 GeneID:521442
            KEGG:bta:521442 CTD:6683 HOVERGEN:HBG108502 InParanoid:A2VDN5
            OMA:HKSTPKT OrthoDB:EOG4NZTTF NextBio:20873307 ArrayExpress:A2VDN5
            Uniprot:A2VDN5
        Length = 614

 Score = 119 (46.9 bits), Expect = 0.00027, Sum P(3) = 0.00027
 Identities = 31/75 (41%), Positives = 42/75 (56%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKT+LAK +A   N  F    A +LT   YVGE  E ++  L A A     
Sbjct:   376 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 429

Query:   388 AAQQGMVYIDEVDKI 402
               Q  +++IDEVD +
Sbjct:   430 ELQPSIIFIDEVDSL 444

 Score = 51 (23.0 bits), Expect = 0.00027, Sum P(3) = 0.00027
 Identities = 18/52 (34%), Positives = 23/52 (44%)

Query:   289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTG-SG 337
             VYN    +   N  L+  SGA PK    + +  N       V+  GPTG SG
Sbjct:   209 VYNDSTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVMKTGPTGLSG 260

 Score = 40 (19.1 bits), Expect = 0.00027, Sum P(3) = 0.00027
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query:    95 PSNLSPPVPAP 105
             P++ SPP P P
Sbjct:    97 PASASPPAPVP 107


>RGD|1308494 [details] [associations]
            symbol:Spast "spastin" species:10116 "Rattus norvegicus"
            [GO:0001578 "microtubule bundle formation" evidence=ISO;ISS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
            "endosome" evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
            evidence=ISO;ISS] [GO:0005815 "microtubule organizing center"
            evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005874
            "microtubule" evidence=IEA;ISO] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=ISO;ISS] [GO:0007049 "cell
            cycle" evidence=IEA] [GO:0007109 "cytokinesis, completion of
            separation" evidence=ISO;ISS] [GO:0007399 "nervous system
            development" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=ISO;ISS] [GO:0008568 "microtubule-severing ATPase
            activity" evidence=IEA;ISO;ISS] [GO:0015630 "microtubule
            cytoskeleton" evidence=ISO;ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031410 "cytoplasmic
            vesicle" evidence=IEA;ISO] [GO:0034214 "protein hexamerization"
            evidence=ISO;ISS] [GO:0043014 "alpha-tubulin binding"
            evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=ISO;ISS]
            [GO:0051013 "microtubule severing" evidence=ISO;ISS] [GO:0051260
            "protein homooligomerization" evidence=ISO;ISS] InterPro:IPR007330
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
            SMART:SM00382 RGD:1308494 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
            GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
            GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
            GO:GO:0007109 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
            GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0043014
            SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146 KO:K13254
            HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:BC166846
            IPI:IPI00365573 RefSeq:NP_001102172.2 UniGene:Rn.41645
            ProteinModelPortal:B2RYN7 SMR:B2RYN7 STRING:B2RYN7 PRIDE:B2RYN7
            GeneID:362700 KEGG:rno:362700 UCSC:RGD:1308494 NextBio:680920
            ArrayExpress:B2RYN7 Genevestigator:B2RYN7 Uniprot:B2RYN7
        Length = 581

 Score = 119 (46.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 31/75 (41%), Positives = 42/75 (56%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKT+LAK +A   N  F    A +LT   YVGE  E ++  L A A     
Sbjct:   343 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 396

Query:   388 AAQQGMVYIDEVDKI 402
               Q  +++IDEVD +
Sbjct:   397 ELQPSIIFIDEVDSL 411

 Score = 46 (21.3 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 22/78 (28%), Positives = 35/78 (44%)

Query:   265 KEICKGLDKFVIGQ----EKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
             +E+ KG+   V GQ    E+A+++ +  + N         L + SGA PK    + +  N
Sbjct:   151 EELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLE-SGAVPKKKDPLTHASN 209

Query:   321 VELEKSNVLLMGPTG-SG 337
                    V+  G TG SG
Sbjct:   210 SLPRSKTVMKSGSTGLSG 227

 Score = 44 (20.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query:    93 SNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
             ++P+   PP PA     + G       P+ ++ YYF
Sbjct:    16 ASPAPARPPPPAAVPAPAAGPAPAPGSPHKRNLYYF 51


>UNIPROTKB|F1M9D2 [details] [associations]
            symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
            SMART:SM00382 RGD:1308494 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
            SMART:SM00745 GeneTree:ENSGT00570000078874 IPI:IPI00365573
            Ensembl:ENSRNOT00000039375 ArrayExpress:F1M9D2 Uniprot:F1M9D2
        Length = 581

 Score = 119 (46.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 31/75 (41%), Positives = 42/75 (56%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKT+LAK +A   N  F    A +LT   YVGE  E ++  L A A     
Sbjct:   343 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 396

Query:   388 AAQQGMVYIDEVDKI 402
               Q  +++IDEVD +
Sbjct:   397 ELQPSIIFIDEVDSL 411

 Score = 46 (21.3 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 22/78 (28%), Positives = 35/78 (44%)

Query:   265 KEICKGLDKFVIGQ----EKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
             +E+ KG+   V GQ    E+A+++ +  + N         L + SGA PK    + +  N
Sbjct:   151 EELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLE-SGAVPKKKDPLTHASN 209

Query:   321 VELEKSNVLLMGPTG-SG 337
                    V+  G TG SG
Sbjct:   210 SLPRSKTVMKSGSTGLSG 227

 Score = 44 (20.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query:    93 SNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
             ++P+   PP PA     + G       P+ ++ YYF
Sbjct:    16 ASPAPARPPPPAAVPAPAAGPAPAPGSPHKRNLYYF 51


>ASPGD|ASPL0000064945 [details] [associations]
            symbol:AN6988 species:162425 "Emericella nidulans"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
            "nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
            particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
            storage granule" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
            assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0032968 "positive regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006289
            "nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
            EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
            RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
            EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
            Uniprot:Q5AXJ2
        Length = 389

 Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
 Identities = 36/106 (33%), Positives = 57/106 (53%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  Y+GE    ++ +L   A 
Sbjct:   165 QPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 222

Query:   384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEG-VQQALLKML 428
                E A   ++++DE+D I     S  I    SG+  VQ+ +L++L
Sbjct:   223 ---EHAPS-IIFMDEIDSIG----SSRIDSAGSGDSEVQRTMLELL 260


>CGD|CAL0005827 [details] [associations]
            symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
            evidence=IEA] [GO:0032968 "positive regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0045899 "positive regulation of RNA polymerase II
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
            [GO:0006289 "nucleotide-excision repair" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
            eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
            RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
            GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
            KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
        Length = 428

 Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
 Identities = 32/103 (31%), Positives = 55/103 (53%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G+GKTLLAK +A  +   F+ + A+ +    Y+GE    ++ ++ A A+ +  
Sbjct:   209 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDK-YIGESAR-LIREMFAYAKEH-- 264

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
               +  ++++DEVD I  +  S   S D   +     LL  ++G
Sbjct:   265 --EPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDG 305


>FB|FBgn0031519 [details] [associations]
            symbol:CG3326 species:7227 "Drosophila melanogaster"
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
            [GO:0036078 "minus-end specific microtubule depolymerization"
            evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
            evidence=IMP] [GO:0005694 "chromosome" evidence=IDA] [GO:0051013
            "microtubule severing" evidence=IMP] [GO:0000070 "mitotic sister
            chromatid segregation" evidence=IMP] [GO:0000091 "mitotic anaphase
            A" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005813 GO:GO:0005694 EMBL:AE014134
            GO:GO:0000287 GO:GO:0000070 eggNOG:COG0464 GO:GO:0008568
            GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 HSSP:P43773
            GeneTree:ENSGT00570000078874 EMBL:AY058790 RefSeq:NP_608763.2
            ProteinModelPortal:Q9VQN8 SMR:Q9VQN8 PaxDb:Q9VQN8 PRIDE:Q9VQN8
            EnsemblMetazoa:FBtr0077603 EnsemblMetazoa:FBtr0331372 GeneID:33544
            KEGG:dme:Dmel_CG3326 UCSC:CG3326-RA FlyBase:FBgn0031519
            InParanoid:Q9VQN8 OMA:AWNEIYG OrthoDB:EOG41RN95 PhylomeDB:Q9VQN8
            GenomeRNAi:33544 NextBio:784133 Bgee:Q9VQN8 GO:GO:0036078
            GO:GO:0000091 Uniprot:Q9VQN8
        Length = 523

 Score = 122 (48.0 bits), Expect = 0.00037, P = 0.00037
 Identities = 31/78 (39%), Positives = 45/78 (57%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G+GKTL+AK++A      F   + ++LT   +VG D E ++  L A A     
Sbjct:   286 VLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSK-WVG-DAEKLVKTLFAVAA---- 339

Query:   388 AAQQGMVYIDEVDKITKK 405
             A Q  +++IDEVD +  K
Sbjct:   340 AHQPAIIFIDEVDSLLSK 357


>UNIPROTKB|F1S3Z2 [details] [associations]
            symbol:SPAST "Spastin" species:9823 "Sus scrofa"
            [GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051013
            "microtubule severing" evidence=IEA] [GO:0048487 "beta-tubulin
            binding" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
            evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
            [GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030496
            "midbody" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
            activity" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0007109 "cytokinesis, completion of separation"
            evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
            evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0005768 "endosome"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001578
            "microtubule bundle formation" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
            Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
            GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
            GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
            GO:GO:0051013 SMART:SM00745 GO:GO:0034214
            GeneTree:ENSGT00570000078874 OMA:HKSTPKT EMBL:FP583344
            EMBL:CU694619 Ensembl:ENSSSCT00000009321 Uniprot:F1S3Z2
        Length = 479

 Score = 121 (47.7 bits), Expect = 0.00038, Sum P(3) = 0.00038
 Identities = 31/78 (39%), Positives = 44/78 (56%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKT+LAK +A   N  F    A +LT   YVGE  E ++  L A A     
Sbjct:   292 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 345

Query:   388 AAQQGMVYIDEVDKITKK 405
               Q  +++IDEVD + ++
Sbjct:   346 ELQPSIIFIDEVDSLLRE 363

 Score = 43 (20.2 bits), Expect = 0.00038, Sum P(3) = 0.00038
 Identities = 18/53 (33%), Positives = 25/53 (47%)

Query:   289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLM-GPTG-SG 337
             VYN    +   N  L+  SGA PK    + +  N  L +S  ++  G TG SG
Sbjct:   125 VYNDSTNLTCRNGHLQSESGAVPKRKDPLTHPSN-SLPRSKAIMKTGSTGLSG 176

 Score = 41 (19.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query:    86 KHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNC 122
             K  D L ++PSN  P   A    GS G    +  P+C
Sbjct:   148 KRKDPL-THPSNSLPRSKAIMKTGSTGLSGHHRAPSC 183

 Score = 40 (19.1 bits), Expect = 0.00038, Sum P(3) = 0.00038
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query:    95 PSNLSPPVPAP 105
             P++ SPP P P
Sbjct:    13 PASASPPAPVP 23


>POMBASE|SPAC1834.11c [details] [associations]
            symbol:sec18 "secretory pathway protein Sec18
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886
            "intracellular protein transport" evidence=IC] [GO:0006888 "ER to
            Golgi vesicle-mediated transport" evidence=ISO] [GO:0016887 "ATPase
            activity" evidence=ISO] [GO:0042144 "vacuole fusion,
            non-autophagic" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 PomBase:SPAC1834.11c Pfam:PF02359 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
            GO:GO:0016887 eggNOG:COG0464 GO:GO:0006888 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042144 InterPro:IPR004201
            Pfam:PF02933 SMART:SM01072 SMART:SM01073 KO:K06027 OMA:HFIFALE
            HOGENOM:HOG000198544 PIR:T50122 RefSeq:NP_594690.1
            ProteinModelPortal:Q9P7Q4 STRING:Q9P7Q4 EnsemblFungi:SPAC1834.11c.1
            GeneID:2542410 KEGG:spo:SPAC1834.11c OrthoDB:EOG4PVS6W
            NextBio:20803469 Uniprot:Q9P7Q4
        Length = 792

 Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
 Identities = 36/106 (33%), Positives = 55/106 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAE-- 383
             +LL GP G+GKTL+A+ + + +N   P ++     L +  YVG+  E++  KL A AE  
Sbjct:   307 ILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNK--YVGQSEENVR-KLFADAERE 363

Query:   384 FNVEAAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
             +     + G+  +  DE+D I KK  S      V  + V Q L KM
Sbjct:   364 YRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKM 409


>WB|WBGene00003818 [details] [associations]
            symbol:nsf-1 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IMP] [GO:0006898
            "receptor-mediated endocytosis" evidence=IMP] [GO:0032940
            "secretion by cell" evidence=IMP] [GO:0071688 "striated muscle
            myosin thick filament assembly" evidence=IMP] [GO:0006915
            "apoptotic process" evidence=IMP] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
            GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
            GO:GO:0006915 GO:GO:0002119 GO:GO:0032940 GO:GO:0046872
            GO:GO:0015031 GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464
            GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
            GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
            HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
            RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
            DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
            PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
            KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
            InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
        Length = 824

 Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
 Identities = 39/106 (36%), Positives = 55/106 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G+GKTL+A+ + + +N   P ++     L +  YVGE  ES + KL A AE  
Sbjct:   333 ILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDK--YVGES-ESNVRKLFADAEEE 389

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
                  A  G+  +  DE+D I K+  S+  S  V    V Q L KM
Sbjct:   390 WRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKM 435


>UNIPROTKB|Q94392 [details] [associations]
            symbol:nsf-1 "Vesicle-fusing ATPase" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0009792
            GO:GO:0006898 GO:GO:0005737 GO:GO:0040007 GO:GO:0006915
            GO:GO:0002119 GO:GO:0032940 GO:GO:0046872 GO:GO:0015031
            GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464 GO:GO:0017111
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
            GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
            HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
            RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
            DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
            PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
            KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
            InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
        Length = 824

 Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
 Identities = 39/106 (36%), Positives = 55/106 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G+GKTL+A+ + + +N   P ++     L +  YVGE  ES + KL A AE  
Sbjct:   333 ILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDK--YVGES-ESNVRKLFADAEEE 389

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
                  A  G+  +  DE+D I K+  S+  S  V    V Q L KM
Sbjct:   390 WRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKM 435


>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
            symbol:spast "spastin" species:7955 "Danio rerio"
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
            activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
            evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
            organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
            evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
            [GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
            "protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
            binding" evidence=ISS] [GO:0051013 "microtubule severing"
            evidence=ISS] [GO:0051260 "protein homooligomerization"
            evidence=ISS] [GO:0001578 "microtubule bundle formation"
            evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
            development" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
            [GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
            regulation of microtubule depolymerization" evidence=IMP]
            [GO:0045773 "positive regulation of axon extension" evidence=IMP]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IMP] [GO:0021955 "central nervous system neuron
            axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
            evidence=IMP] [GO:0005815 "microtubule organizing center"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
            Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
            ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
            GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
            eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
            GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
            GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
            GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
            KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
            OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
            IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
            ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
            Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
            NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
        Length = 570

 Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
 Identities = 31/75 (41%), Positives = 42/75 (56%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKT+LAK +A   N  F    A TLT   YVGE  E ++  L A A     
Sbjct:   331 LLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSK-YVGEG-EKLVRALFAVAR---- 384

Query:   388 AAQQGMVYIDEVDKI 402
               Q  +++IDE+D +
Sbjct:   385 ELQPSIIFIDEIDSL 399


>ASPGD|ASPL0000062283 [details] [associations]
            symbol:AN1366 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
            EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
        Length = 729

 Score = 123 (48.4 bits), Expect = 0.00046, P = 0.00046
 Identities = 40/119 (33%), Positives = 58/119 (48%)

Query:   309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
             P T   V    NV+  +  VLL GP G GKT++A   A  + VPF+   A ++  +G  G
Sbjct:   184 PMTRPQVYLASNVQPPRG-VLLHGPPGCGKTMIANAFAAELGVPFISISAPSIV-SGMSG 241

Query:   369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
             E  E  L +   +A+         +++IDE+D IT K E  N  R++    V Q L  M
Sbjct:   242 ES-EKALREHFEEAKRLAPC----LIFIDEIDAITPKRE--NSQREMEKRIVAQLLTCM 293


>SGD|S000005785 [details] [associations]
            symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
            proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
            "ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
            RNA polymerase II transcriptional preinitiation complex assembly"
            evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
            particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
            complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
            assembly" evidence=IMP] [GO:0030433 "ER-associated protein
            catabolic process" evidence=IMP] [GO:0032968 "positive regulation
            of transcription elongation from RNA polymerase II promoter"
            evidence=IMP] [GO:0006289 "nucleotide-excision repair"
            evidence=IGI] [GO:0019904 "protein domain specific binding"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
            GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
            RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
            GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
            GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
            PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
            ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
            MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
            EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
            NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
            Uniprot:P53549
        Length = 437

 Score = 120 (47.3 bits), Expect = 0.00047, P = 0.00047
 Identities = 33/101 (32%), Positives = 57/101 (56%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G+GKTLLAK +A  +   F+ + A+ +    Y+GE    I+ ++ A A+ +  
Sbjct:   218 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDK-YIGESAR-IIREMFAYAKEH-- 273

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 428
               +  ++++DEVD I  +  S   S D     +Q+ L+++L
Sbjct:   274 --EPCIIFMDEVDAIGGRRFSEGTSAD---REIQRTLMELL 309


>UNIPROTKB|G4N517 [details] [associations]
            symbol:MGG_05193 "Cell division control protein 48"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
            GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
            Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
            RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
            EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
            Uniprot:G4N517
        Length = 820

 Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
 Identities = 37/103 (35%), Positives = 54/103 (52%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G+GKTL+A+ +A      F + +   +  +   GE  ES L K   +AE N  
Sbjct:   259 VLLYGPPGTGKTLMARAVANETGAFFFLINGPEI-MSKMAGES-ESNLRKAFEEAEKNSP 316

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
             A    +++IDE+D I  K E  N   +V    V Q LL +++G
Sbjct:   317 A----IIFIDEIDSIAPKREKTN--GEVERRVVSQ-LLTLMDG 352


>UNIPROTKB|E2QY79 [details] [associations]
            symbol:NVL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
            EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
            Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
        Length = 851

 Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
 Identities = 39/100 (39%), Positives = 53/100 (53%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G GKTLLA  +A  +++P +   AT +  +G  GE  E  L +L  QA  N  
Sbjct:   295 VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVV-SGVSGES-EQKLRELFEQAVSNAP 352

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
                  +++IDE+D IT K E    S+D+    V Q L  M
Sbjct:   353 C----VLFIDEIDAITPKREVA--SKDMERRIVAQLLTCM 386


>UNIPROTKB|J9P5D7 [details] [associations]
            symbol:NVL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
            EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
            EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
        Length = 855

 Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
 Identities = 39/100 (39%), Positives = 53/100 (53%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G GKTLLA  +A  +++P +   AT +  +G  GE  E  L +L  QA  N  
Sbjct:   295 VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVV-SGVSGES-EQKLRELFEQAVSNAP 352

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
                  +++IDE+D IT K E    S+D+    V Q L  M
Sbjct:   353 C----VLFIDEIDAITPKREVA--SKDMERRIVAQLLTCM 386


>UNIPROTKB|E1BH39 [details] [associations]
            symbol:KATNA1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051329 "interphase of mitotic cell cycle"
            evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0045502 "dynein binding" evidence=IEA] [GO:0031122 "cytoplasmic
            microtubule organization" evidence=IEA] [GO:0030424 "axon"
            evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
            [GO:0008017 "microtubule binding" evidence=IEA] [GO:0005886 "plasma
            membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
            [GO:0005811 "lipid particle" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0001578 "microtubule bundle formation" evidence=IEA]
            [GO:0000922 "spindle pole" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
            GO:GO:0001764 GO:GO:0008104 GO:GO:0005811 GO:GO:0030424
            GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
            Pfam:PF09336 GO:GO:0000922 GO:GO:0031122 KO:K07767
            GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK GO:GO:0051329
            EMBL:DAAA02027051 IPI:IPI00706925 RefSeq:NP_001179032.1
            UniGene:Bt.41985 ProteinModelPortal:E1BH39
            Ensembl:ENSBTAT00000001172 GeneID:506715 KEGG:bta:506715
            NextBio:20867726 Uniprot:E1BH39
        Length = 491

 Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
 Identities = 35/94 (37%), Positives = 48/94 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL++GP G+GKTLLAK +A      F    ++TLT   Y GE  E ++  L   A F   
Sbjct:   245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302

Query:   388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
             A     ++IDE+D I  +   +E    SR V  E
Sbjct:   303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332


>UNIPROTKB|E2R3K3 [details] [associations]
            symbol:KATNA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008568 "microtubule-severing ATPase
            activity" evidence=IEA] [GO:0008104 "protein localization"
            evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005811 "lipid particle"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
            "neuron migration" evidence=IEA] [GO:0001578 "microtubule bundle
            formation" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0051329 "interphase of
            mitotic cell cycle" evidence=IEA] [GO:0051013 "microtubule
            severing" evidence=IEA] [GO:0046982 "protein heterodimerization
            activity" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
            [GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
            [GO:0030424 "axon" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0005811
            GO:GO:0030424 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
            InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0031122
            KO:K07767 GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK
            GO:GO:0051329 EMBL:AAEX03000265 RefSeq:XP_533445.1
            ProteinModelPortal:E2R3K3 Ensembl:ENSCAFT00000000603 GeneID:476240
            KEGG:cfa:476240 Uniprot:E2R3K3
        Length = 491

 Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
 Identities = 35/94 (37%), Positives = 48/94 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL++GP G+GKTLLAK +A      F    ++TLT   Y GE  E ++  L   A F   
Sbjct:   245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302

Query:   388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
             A     ++IDE+D I  +   +E    SR V  E
Sbjct:   303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332


>UNIPROTKB|O75449 [details] [associations]
            symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
            evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0001578
            "microtubule bundle formation" evidence=IEA] [GO:0001764 "neuron
            migration" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0008104 "protein
            localization" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0030424 "axon"
            evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0031122
            "cytoplasmic microtubule organization" evidence=IEA] [GO:0043025
            "neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
            evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
            [GO:0008568 "microtubule-severing ATPase activity" evidence=IDA]
            [GO:0008017 "microtubule binding" evidence=IDA] [GO:0046982
            "protein heterodimerization activity" evidence=IPI] [GO:0051329
            "interphase of mitotic cell cycle" evidence=IMP] [GO:0000922
            "spindle pole" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
            [GO:0005819 "spindle" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
            Pathway_Interaction_DB:lis1pathway GO:GO:0008104 GO:GO:0051301
            GO:GO:0007067 GO:GO:0005811 EMBL:CH471051 GO:GO:0030424
            GO:GO:0043025 GO:GO:0030426 eggNOG:COG0464 GO:GO:0008017
            GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
            Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 GO:GO:0031122
            HOVERGEN:HBG057074 GO:GO:0010977 EMBL:AL078581 KO:K07767
            HAMAP:MF_03023 HOGENOM:HOG000225142 CTD:11104 OMA:SQYSDPK
            OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AF056022 EMBL:BX276089
            EMBL:BC050428 IPI:IPI00013075 IPI:IPI00384339 RefSeq:NP_001191005.1
            RefSeq:NP_008975.1 UniGene:Hs.450175 ProteinModelPortal:O75449
            SMR:O75449 STRING:O75449 PhosphoSite:O75449 PaxDb:O75449
            PRIDE:O75449 Ensembl:ENST00000335643 Ensembl:ENST00000335647
            Ensembl:ENST00000367411 GeneID:11104 KEGG:hsa:11104 UCSC:uc003qmr.2
            UCSC:uc003qmt.3 GeneCards:GC06M149957 HGNC:HGNC:6216 HPA:HPA036207
            MIM:606696 neXtProt:NX_O75449 PharmGKB:PA30017 InParanoid:O75449
            ChiTaRS:KATNA1 GenomeRNAi:11104 NextBio:42220 ArrayExpress:O75449
            Bgee:O75449 CleanEx:HS_KATNA1 Genevestigator:O75449 Uniprot:O75449
        Length = 491

 Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
 Identities = 35/94 (37%), Positives = 48/94 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL++GP G+GKTLLAK +A      F    ++TLT   Y GE  E ++  L   A F   
Sbjct:   245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302

Query:   388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
             A     ++IDE+D I  +   +E    SR V  E
Sbjct:   303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332


>UNIPROTKB|Q4R407 [details] [associations]
            symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
            species:9541 "Macaca fascicularis" [GO:0000922 "spindle pole"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
            "spindle" evidence=ISS] [GO:0016567 "protein ubiquitination"
            evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815 HSSP:Q01853
            GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
            GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AB179108
            ProteinModelPortal:Q4R407 Uniprot:Q4R407
        Length = 491

 Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
 Identities = 35/94 (37%), Positives = 48/94 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL++GP G+GKTLLAK +A      F    ++TLT   Y GE  E ++  L   A F   
Sbjct:   245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302

Query:   388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
             A     ++IDE+D I  +   +E    SR V  E
Sbjct:   303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332


>RGD|1303062 [details] [associations]
            symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
            species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
            evidence=ISO;ISS] [GO:0001578 "microtubule bundle formation"
            evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=TAS] [GO:0005634 "nucleus"
            evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
            [GO:0005811 "lipid particle" evidence=IEA;ISO] [GO:0005813
            "centrosome" evidence=IEA;ISO] [GO:0005819 "spindle"
            evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0006200 "ATP
            catabolic process" evidence=ISO] [GO:0007067 "mitosis"
            evidence=TAS] [GO:0008017 "microtubule binding" evidence=IEA;ISO]
            [GO:0008104 "protein localization" evidence=ISO;TAS] [GO:0008568
            "microtubule-severing ATPase activity" evidence=IEA;ISO]
            [GO:0010977 "negative regulation of neuron projection development"
            evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISO;TAS] [GO:0030424 "axon"
            evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=IDA]
            [GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031122 "cytoplasmic
            microtubule organization" evidence=IEA;ISO] [GO:0043025 "neuronal
            cell body" evidence=IDA] [GO:0045502 "dynein binding"
            evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA;ISO] [GO:0051013 "microtubule severing"
            evidence=ISO;IDA] [GO:0051301 "cell division" evidence=IEA]
            [GO:0051329 "interphase of mitotic cell cycle" evidence=IEA;ISO]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1303062
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
            GO:GO:0001764 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
            GO:GO:0005811 GO:GO:0030424 GO:GO:0043025 GO:GO:0016887
            GO:GO:0030426 eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578
            GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
            GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0010977
            KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
            GeneTree:ENSGT00550000074466 BRENDA:3.6.4.3 CTD:11104 OMA:SQYSDPK
            OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AY621629 EMBL:BC097929
            IPI:IPI00363811 RefSeq:NP_001004217.2 UniGene:Rn.47464
            ProteinModelPortal:Q6E0V2 STRING:Q6E0V2 PRIDE:Q6E0V2
            Ensembl:ENSRNOT00000020417 GeneID:292464 KEGG:rno:292464
            UCSC:RGD:1303062 InParanoid:Q6E0V2 NextBio:634169
            Genevestigator:Q6E0V2 GermOnline:ENSRNOG00000014996 Uniprot:Q6E0V2
        Length = 491

 Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
 Identities = 35/94 (37%), Positives = 48/94 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL++GP G+GKTLLAK +A      F    ++TLT   Y GE  E ++  L   A F   
Sbjct:   245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302

Query:   388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
             A     ++IDE+D I  +   +E    SR V  E
Sbjct:   303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332


>UNIPROTKB|F1LZ09 [details] [associations]
            symbol:F1LZ09 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
            Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
        Length = 369

 Score = 122 (48.0 bits), Expect = 0.00058, Sum P(2) = 0.00058
 Identities = 35/122 (28%), Positives = 57/122 (46%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL+ GP G GKT+LAKT+A H+   F+    +      Y+GE    I++ +    + N  
Sbjct:   151 VLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHK-YLGEGPR-IIWDVFHLDKENAP 208

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDE+D I  K        D   + +   LL  ++G   N+  K      R D
Sbjct:   209 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNISVKAIMATNRKD 264

Query:   448 SI 449
             ++
Sbjct:   265 TL 266

 Score = 38 (18.4 bits), Expect = 0.00058, Sum P(2) = 0.00058
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query:   265 KEICKGLDK-FVIGQEKAKKVLSV 287
             K+  K L K F+  QEK K++ S+
Sbjct:    11 KDEQKNLKKEFLHAQEKVKQIQSI 34


>WB|WBGene00018991 [details] [associations]
            symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0009378 "four-way junction helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
            regulation of locomotion" evidence=IMP] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
            GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
            GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
            EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
            SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
            EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
            UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
            OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
        Length = 432

 Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
 Identities = 35/106 (33%), Positives = 56/106 (52%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H    F+    + L Q  ++GE    +  +L   A 
Sbjct:   208 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 265

Query:   384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKML 428
                E A   ++++DE+D I + + E    SR    E VQ+ +L++L
Sbjct:   266 ---EHAPS-IIFMDEIDSIGSSRVEG---SRGGDSE-VQRTMLELL 303


>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
            symbol:PFL2345c "tat-binding protein homolog"
            species:5833 "Plasmodium falciparum" [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0003712 "transcription cofactor activity" evidence=ISS]
            [GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
            GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
            RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
            MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
            GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
            Uniprot:Q8I4U5
        Length = 435

 Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
 Identities = 34/108 (31%), Positives = 57/108 (52%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  Y+GE    ++ +L   A 
Sbjct:   212 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 269

Query:   384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 430
                E A   ++++DE+D I +++ E  +   +V  +     LL  L+G
Sbjct:   270 ---EHAPS-IIFMDEIDSIGSQRIEGEHGDSEV--QRTMMELLNQLDG 311


>UNIPROTKB|Q8I4U5 [details] [associations]
            symbol:PFL2345c "Tat-binding protein homolog" species:36329
            "Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
            TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
            ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
            ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
            PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
            KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
        Length = 435

 Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
 Identities = 34/108 (31%), Positives = 57/108 (52%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  Y+GE    ++ +L   A 
Sbjct:   212 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 269

Query:   384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 430
                E A   ++++DE+D I +++ E  +   +V  +     LL  L+G
Sbjct:   270 ---EHAPS-IIFMDEIDSIGSQRIEGEHGDSEV--QRTMMELLNQLDG 311


>POMBASE|SPBC16E9.10c [details] [associations]
            symbol:SPBC16E9.10c "AAA family ATPase Rix7
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
            "ribosomal large subunit export from nucleus" evidence=ISO]
            [GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
            "ATPase activity" evidence=ISO] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
            EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
            HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
            OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
            ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
            GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
            Uniprot:O14325
        Length = 779

 Score = 122 (48.0 bits), Expect = 0.00064, P = 0.00064
 Identities = 36/102 (35%), Positives = 55/102 (53%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G GKT+LA  LA  + VPF+   A ++  +G  GE  E  + ++  +A+    
Sbjct:   211 VLLHGPPGCGKTMLANALANELGVPFISISAPSIV-SGMSGES-EKKVREVFEEAK---- 264

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
             +    +++IDE+D +T K ES    R++    V Q L  M E
Sbjct:   265 SLAPCLMFIDEIDAVTPKRESAQ--REMERRIVAQFLTCMDE 304


>UNIPROTKB|P46470 [details] [associations]
            symbol:psmc5 "26S protease regulatory subunit 8"
            species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
            complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
            UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
            KEGG:xla:397968 Uniprot:P46470
        Length = 461

 Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
 Identities = 33/107 (30%), Positives = 52/107 (48%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  ++GE    +  +L   A 
Sbjct:   177 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 234

Query:   384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                E A   ++++DE+D I  + E      D   +     LL  L+G
Sbjct:   235 ---EHAPS-IIFMDEIDSIGSRLEG-GSGGDSEVQRTMLELLNQLDG 276


>TAIR|locus:2085064 [details] [associations]
            symbol:CDC48 "cell division cycle 48" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
            "cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
            "spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
            [GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
            tube growth" evidence=IMP] [GO:0051301 "cell division"
            evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
            glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
            evidence=RCA] [GO:0042742 "defense response to bacterium"
            evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
            GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
            GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
            GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
            GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
            GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
            EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
            UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
            SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
            ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
            KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
            HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
            PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
            GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
            Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
            Uniprot:P54609
        Length = 809

 Score = 122 (48.0 bits), Expect = 0.00067, P = 0.00067
 Identities = 40/119 (33%), Positives = 59/119 (49%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP GSGKTL+A+ +A      F   +   +  +   GE  ES L K   +AE N  
Sbjct:   244 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 301

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG--TIVNVPEKGARKHP 444
             +    +++IDE+D I  K E  N   +V    V Q LL +++G  +  +V   GA   P
Sbjct:   302 S----IIFIDEIDSIAPKREKTN--GEVERRIVSQ-LLTLMDGLKSRAHVIVMGATNRP 353


>TAIR|locus:2831844 [details] [associations]
            symbol:AtCDC48C "cell division cycle 48C" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
            EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
            GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
            KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
            IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
            SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
            EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
            GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
            PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
            Uniprot:Q9LZF6
        Length = 810

 Score = 122 (48.0 bits), Expect = 0.00067, P = 0.00067
 Identities = 40/119 (33%), Positives = 59/119 (49%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP GSGKTL+A+ +A      F   +   +  +   GE  ES L K   +AE N  
Sbjct:   244 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 301

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG--TIVNVPEKGARKHP 444
             +    +++IDE+D I  K E  N   +V    V Q LL +++G  +  +V   GA   P
Sbjct:   302 S----IIFIDEIDSIAPKREKTN--GEVERRIVSQ-LLTLMDGLKSRAHVIVMGATNRP 353


>UNIPROTKB|Q7QBW0 [details] [associations]
            symbol:spas "Spastin" species:7165 "Anopheles gambiae"
            [GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
            "microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
            "microtubule severing" evidence=ISS] InterPro:IPR007330
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005815 Pfam:PF04212
            eggNOG:COG0464 GO:GO:0008017 HSSP:O75351 GO:GO:0008568
            GO:GO:0051013 GO:GO:0005874 SMART:SM00745 EMBL:AAAB01008859
            RefSeq:XP_312634.5 GeneID:1273633 KEGG:aga:AgaP_AGAP002334
            VectorBase:AGAP002334 CTD:1273633 KO:K13254 OrthoDB:EOG44XGXW
            PhylomeDB:Q7QBW0 HAMAP:MF_03021 Uniprot:Q7QBW0
        Length = 827

 Score = 122 (48.0 bits), Expect = 0.00069, P = 0.00069
 Identities = 32/81 (39%), Positives = 44/81 (54%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKTLLA+ +A   +  F    A TLT   YVG D E ++  L A A     
Sbjct:   588 LLLFGPPGNGKTLLARAVATECSATFFSISAATLTSK-YVG-DGEKLVRALFAVAR---- 641

Query:   388 AAQQGMVYIDEVDKITKKAES 408
               Q  +++IDEVD +  +  S
Sbjct:   642 ELQPSIIFIDEVDSVLSERSS 662


>DICTYBASE|DDB_G0282181 [details] [associations]
            symbol:nvl "valosin-containing protein" species:44689
            "Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
            export from nucleus" evidence=ISS] [GO:0042254 "ribosome
            biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
            dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
            GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
            eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
            RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
            EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
            InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
            Uniprot:Q54SY2
        Length = 867

 Score = 132 (51.5 bits), Expect = 0.00069, Sum P(2) = 0.00069
 Identities = 39/100 (39%), Positives = 54/100 (54%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP+G GKTLLAK +A  + VP     AT +T +G  GE  E+ +  L +    N  
Sbjct:   253 ILLHGPSGCGKTLLAKAIAGELKVPLFAISATEIT-SGVSGES-EARVRTLFS----NAI 306

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
             A    +++IDE+D I  K ES   S+D+    V Q L  M
Sbjct:   307 AQAPCIIFIDEIDAIAPKRESA--SKDMERRIVSQLLTCM 344

 Score = 37 (18.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query:   302 KKGSGAEPKTAAAVDNDDNVELEKSNVL 329
             KK +  + +    +D  + ++L +SN+L
Sbjct:     4 KKYTSGQNENEKLMDRIEKLDLSESNIL 31


>UNIPROTKB|E2RM61 [details] [associations]
            symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
            GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
            EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
            Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
            Uniprot:E2RM61
        Length = 251

 Score = 114 (45.2 bits), Expect = 0.00072, P = 0.00072
 Identities = 33/106 (31%), Positives = 55/106 (51%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  ++GE    +  +L   A 
Sbjct:   133 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 190

Query:   384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEG-VQQALLKML 428
                E A   ++++DE+D I     S  +     G+  VQ+ +L++L
Sbjct:   191 ---EHAPS-IIFMDEIDSIG----SSRLEGGSGGDSEVQRTMLELL 228


>UNIPROTKB|F1NXP0 [details] [associations]
            symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
            "metalloendopeptidase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
            organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
            transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
            GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
            GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
            TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
            IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
        Length = 768

 Score = 121 (47.7 bits), Expect = 0.00080, P = 0.00080
 Identities = 48/155 (30%), Positives = 73/155 (47%)

Query:   329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
             LL+GP G GKTLLAK +A    VPF+    +   +   +G    + +  L  +A+    A
Sbjct:   319 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEV--IGGLGAARVRSLFREAQ----A 372

Query:   389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHP--RG 446
                 +VYIDE+D + KK  S N+S   + E  +Q L ++L    V +   G   H     
Sbjct:   373 RAPCIVYIDEIDAVGKK-RSTNVSGFANAEE-EQTLNQLL----VEMDGMGTTDHVIVLA 426

Query:   447 DSIQMDTKDILFICGGA-----FVDLEKTISERRQ 476
              + + D  D   +  G      F+DL  T+ ERR+
Sbjct:   427 STNRADVLDNALMRPGRLDRHIFIDLP-TLQERRE 460


>UNIPROTKB|J3QQM1 [details] [associations]
            symbol:PSMC5 "26S protease regulatory subunit 8"
            species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
            GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
            HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
        Length = 263

 Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
 Identities = 33/106 (31%), Positives = 55/106 (51%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  ++GE    +  +L   A 
Sbjct:   163 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 220

Query:   384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEG-VQQALLKML 428
                E A   ++++DE+D I     S  +     G+  VQ+ +L++L
Sbjct:   221 ---EHAPS-IIFMDEIDSIG----SSRLEGGSGGDSEVQRTMLELL 258


>UNIPROTKB|B4DFA2 [details] [associations]
            symbol:NSF "cDNA FLJ59316, highly similar to Vesicle-fusing
            ATPase (EC 3.6.4.6)" species:9606 "Homo sapiens" [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006813 "potassium ion transport"
            evidence=IEA] [GO:0019905 "syntaxin binding" evidence=IEA]
            [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 GO:GO:0016192 GO:GO:0015031
            GO:GO:0043198 GO:GO:0005795 GO:GO:0006813 GO:GO:0042623
            InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 GO:GO:0017157
            EMBL:AC138645 HOVERGEN:HBG000324 EMBL:AC217780 UniGene:Hs.431279
            HGNC:HGNC:8016 ChiTaRS:NSF EMBL:AK294001 IPI:IPI00985110 SMR:B4DFA2
            STRING:B4DFA2 Ensembl:ENST00000225282 Uniprot:B4DFA2
        Length = 644

 Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   162 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 218

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   219 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 266


>UNIPROTKB|J3QRR3 [details] [associations]
            symbol:PSMC5 "26S protease regulatory subunit 8"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
            ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000584880 Uniprot:J3QRR3
        Length = 127

 Score = 95 (38.5 bits), Expect = 0.00082, P = 0.00082
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query:   324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
             +   VLL GP G+GKTLLA+ +A H +  F+    + L Q  ++GE
Sbjct:    37 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGE 81


>UNIPROTKB|B7PXE3 [details] [associations]
            symbol:spas "Spastin" species:6945 "Ixodes scapularis"
            [GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
            "microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
            "microtubule severing" evidence=ISS] InterPro:IPR007330
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
            SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
            GO:GO:0005815 Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017
            GO:GO:0008568 GO:GO:0051013 GO:GO:0005874 KO:K13254
            OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA EMBL:DS813618
            RefSeq:XP_002400359.1 EnsemblMetazoa:ISCW020482-RA GeneID:8032764
            KEGG:isc:IscW_ISCW020482 VectorBase:ISCW020482 CTD:8032764
            PhylomeDB:B7PXE3 Uniprot:B7PXE3
        Length = 648

 Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00083
 Identities = 31/75 (41%), Positives = 43/75 (57%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             +LL GP G+GKT+LAK +A   N  F+   A +LT   YVGE  E ++  L A A     
Sbjct:   410 LLLFGPPGNGKTMLAKAVAHESNSTFLNISAASLTSK-YVGEG-EKLVRALFAVAR---- 463

Query:   388 AAQQGMVYIDEVDKI 402
               Q  +++IDEVD +
Sbjct:   464 ELQPSIIFIDEVDSL 478


>FB|FBgn0037742 [details] [associations]
            symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
            species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
            evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
            subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
            [GO:0006974 "response to DNA damage stimulus" evidence=IMP]
            InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
            PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
            GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
            GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
            RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
            EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
            KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
            OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
            Uniprot:Q9VH79
        Length = 405

 Score = 117 (46.2 bits), Expect = 0.00088, P = 0.00088
 Identities = 33/105 (31%), Positives = 49/105 (46%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI--LYKLLAQAEFN 385
             VLL GP G GKT+LAK +A H    F+    +   Q  Y+GE    +  L++L  Q   N
Sbjct:   189 VLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQK-YLGEGPRMVRDLFRLAKQ---N 244

Query:   386 VEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                    +++IDE+D I  K        D   + +   LL  ++G
Sbjct:   245 ----SPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG 285


>TAIR|locus:2161258 [details] [associations]
            symbol:RPT3 "regulatory particle triple-A ATPase 3"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
            [GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
            "ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
            "cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
            catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
            stimulus" evidence=RCA] [GO:0009853 "photorespiration"
            evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
            evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0043248 "proteasome assembly"
            evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
            GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
            GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
            IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
            ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
            PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
            KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
            KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
            GermOnline:AT5G58290 Uniprot:Q9SEI4
        Length = 408

 Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
 Identities = 36/122 (29%), Positives = 54/122 (44%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G+GKT+LAK +A H    F+    +   Q  Y+GE    +   +   A+ N  
Sbjct:   192 VLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 249

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD 447
             A    +++IDEVD I           D   + +   LL  ++G    V  K      R D
Sbjct:   250 A----IIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRAD 305

Query:   448 SI 449
             ++
Sbjct:   306 TL 307


>UNIPROTKB|F1MIM8 [details] [associations]
            symbol:NVL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
            GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
            IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
        Length = 855

 Score = 121 (47.7 bits), Expect = 0.00092, P = 0.00092
 Identities = 40/100 (40%), Positives = 55/100 (55%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G GKTLLA  +A  +++P +   AT +  +G  GE  E  L +L  QA   V 
Sbjct:   300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIV-SGVSGES-EQKLRELFEQA---VS 354

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
             +A   +++IDE+D IT K E    S+D+    V Q L  M
Sbjct:   355 SAPC-ILFIDEIDAITPKREIA--SKDMERRIVAQLLTCM 391


>UNIPROTKB|Q1HGK7 [details] [associations]
            symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
            species:9031 "Gallus gallus" [GO:0008568 "microtubule-severing
            ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007067
            "mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
            [GO:0001578 "microtubule bundle formation" evidence=IEA]
            [GO:0001764 "neuron migration" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
            [GO:0005813 "centrosome" evidence=IEA] [GO:0005886 "plasma
            membrane" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
            [GO:0030424 "axon" evidence=IEA] [GO:0031122 "cytoplasmic
            microtubule organization" evidence=IEA] [GO:0045502 "dynein
            binding" evidence=IEA] [GO:0046982 "protein heterodimerization
            activity" evidence=IEA] [GO:0051013 "microtubule severing"
            evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
            evidence=IEA] [GO:0000922 "spindle pole" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0005819 "spindle" evidence=ISS]
            [GO:0030496 "midbody" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005813 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
            GO:GO:0005811 GO:GO:0030424 eggNOG:COG0464 GO:GO:0008568
            GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
            GO:GO:0000922 GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074
            KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
            GeneTree:ENSGT00550000074466 EMBL:DQ486889 IPI:IPI00786289
            RefSeq:NP_001038113.1 UniGene:Gga.12204 ProteinModelPortal:Q1HGK7
            Ensembl:ENSGALT00000020211 GeneID:421626 KEGG:gga:421626 CTD:11104
            InParanoid:Q1HGK7 OMA:SQYSDPK OrthoDB:EOG4CJVGZ NextBio:20824364
            GO:GO:0051329 Uniprot:Q1HGK7
        Length = 492

 Score = 118 (46.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 34/94 (36%), Positives = 47/94 (50%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VL++GP G+GKTLLAK +A      F    ++TLT   Y GE  E ++  L   A F   
Sbjct:   246 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYAP 303

Query:   388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
                   ++IDE+D I  +   +E    SR V  E
Sbjct:   304 TT----IFIDEIDSICSRRGTSEEHEASRRVKAE 333


>UNIPROTKB|H0Y8B6 [details] [associations]
            symbol:NVL "Nuclear valosin-containing protein-like"
            species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
            "aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
            GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
            Ensembl:ENST00000469968 Uniprot:H0Y8B6
        Length = 739

 Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00098
 Identities = 38/100 (38%), Positives = 52/100 (52%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
             VLL GP G GKTLLA  +A  +++P +   A  +  +G  GE  E  L +L  QA  N  
Sbjct:   184 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV-SGVSGES-EQKLRELFEQAVSNAP 241

Query:   388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
                  +++IDE+D IT K E    S+D+    V Q L  M
Sbjct:   242 C----IIFIDEIDAITPKREVA--SKDMERRIVAQLLTCM 275


>UNIPROTKB|I3L0N3 [details] [associations]
            symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
            sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006813
            "potassium ion transport" evidence=IEA] [GO:0019905 "syntaxin
            binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016192
            GO:GO:0015031 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
            InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            GO:GO:0017157 EMBL:AC138645 EMBL:AC217780 HGNC:HGNC:8016
            ChiTaRS:NSF ProteinModelPortal:I3L0N3 SMR:I3L0N3 PRIDE:I3L0N3
            Ensembl:ENST00000575068 Bgee:I3L0N3 Uniprot:I3L0N3
        Length = 739

 Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00098
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   251 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 307

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   308 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 355


>UNIPROTKB|P46459 [details] [associations]
            symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
            sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
            [GO:0019905 "syntaxin binding" evidence=IEA] [GO:0042623 "ATPase
            activity, coupled" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
            [GO:0006887 "exocytosis" evidence=TAS] [GO:0045026 "plasma membrane
            fusion" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0001921
            "positive regulation of receptor recycling" evidence=IDA]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0007268 "synaptic
            transmission" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
            Reactome:REACT_13685 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
            GO:GO:0005524 GO:GO:0032403 GO:GO:0046872 GO:GO:0015031
            GO:GO:0007268 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
            GO:GO:0006887 eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201
            Pfam:PF02933 SMART:SM01072 SMART:SM01073 GO:GO:0017157
            GO:GO:0045026 EMBL:AC138645 KO:K06027 OMA:IFTLRTH
            HOGENOM:HOG000198544 HOVERGEN:HBG000324 EMBL:U03985 EMBL:AF135168
            EMBL:AF102846 EMBL:AK290204 EMBL:AC004098 EMBL:AC138688
            EMBL:AC217769 EMBL:AC217778 EMBL:AC217780 EMBL:BC030613
            IPI:IPI00006451 PIR:G01234 RefSeq:NP_006169.2 UniGene:Hs.431279
            ProteinModelPortal:P46459 SMR:P46459 DIP:DIP-389N IntAct:P46459
            MINT:MINT-1369243 STRING:P46459 TCDB:1.F.1.1.1 PhosphoSite:P46459
            DMDM:257051048 UCD-2DPAGE:P46459 PaxDb:P46459 PRIDE:P46459
            Ensembl:ENST00000398238 GeneID:4905 KEGG:hsa:4905 UCSC:uc002iku.3
            CTD:4905 GeneCards:GC17P044668 H-InvDB:HIX0013914
            H-InvDB:HIX0013915 HGNC:HGNC:8016 HPA:CAB009324 HPA:CAB013645
            HPA:HPA003154 MIM:601633 neXtProt:NX_P46459 PharmGKB:PA31793
            InParanoid:P46459 OrthoDB:EOG4DZ1TR PhylomeDB:P46459 ChiTaRS:NSF
            GenomeRNAi:4905 NextBio:18875 PMAP-CutDB:P46459 ArrayExpress:P46459
            Bgee:P46459 CleanEx:HS_NSF Genevestigator:P46459
            GermOnline:ENSG00000073969 Uniprot:P46459
        Length = 744

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 360


>UNIPROTKB|P18708 [details] [associations]
            symbol:NSF "Vesicle-fusing ATPase" species:10029
            "Cricetulus griseus" [GO:0030496 "midbody" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
            GO:GO:0015031 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0030496 InterPro:IPR004201 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 EMBL:X15652 PIR:S04235 PDB:1D2N
            PDB:1NSF PDB:1QCS PDB:1QDN PDBsum:1D2N PDBsum:1NSF PDBsum:1QCS
            PDBsum:1QDN ProteinModelPortal:P18708 SMR:P18708 DIP:DIP-35598N
            IntAct:P18708 PRIDE:P18708 HOVERGEN:HBG000324
            EvolutionaryTrace:P18708 Uniprot:P18708
        Length = 744

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 360


>MGI|MGI:104560 [details] [associations]
            symbol:Nsf "N-ethylmaleimide sensitive fusion protein"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001921 "positive regulation of receptor
            recycling" evidence=ISO] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISO]
            [GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
            catabolic process" evidence=ISO;IMP] [GO:0006810 "transport"
            evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
            [GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0014069
            "postsynaptic density" evidence=ISO] [GO:0015031 "protein
            transport" evidence=ISO] [GO:0016192 "vesicle-mediated transport"
            evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0017137 "Rab
            GTPase binding" evidence=ISO] [GO:0017157 "regulation of
            exocytosis" evidence=ISO] [GO:0019905 "syntaxin binding"
            evidence=IDA] [GO:0030165 "PDZ domain binding" evidence=ISO]
            [GO:0032403 "protein complex binding" evidence=ISO] [GO:0042623
            "ATPase activity, coupled" evidence=IMP] [GO:0043008 "ATP-dependent
            protein binding" evidence=ISO] [GO:0043198 "dendritic shaft"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            MGI:MGI:104560 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524
            GO:GO:0016192 GO:GO:0046872 GO:GO:0015031 GO:GO:0043198
            GO:GO:0005795 GO:GO:0019905 GO:GO:0006813 eggNOG:COG0464
            GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
            SMART:SM01073 GO:GO:0017157 GeneTree:ENSGT00530000064085 KO:K06027
            OMA:IFTLRTH HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR
            ChiTaRS:NSF EMBL:U10120 EMBL:AK028415 EMBL:AK032120 EMBL:AK049281
            EMBL:AK051430 EMBL:AK085086 EMBL:AK153905 EMBL:AL596108
            EMBL:AL603829 EMBL:BC006627 EMBL:BC019167 IPI:IPI00656325
            RefSeq:NP_032766.2 UniGene:Mm.260117 UniGene:Mm.474887
            ProteinModelPortal:P46460 SMR:P46460 IntAct:P46460 MINT:MINT-89339
            STRING:P46460 PhosphoSite:P46460 REPRODUCTION-2DPAGE:P46460
            PaxDb:P46460 PRIDE:P46460 Ensembl:ENSMUST00000103075 GeneID:18195
            KEGG:mmu:18195 UCSC:uc007lvt.1 InParanoid:P46460 NextBio:293548
            Bgee:P46460 CleanEx:MM_NSF Genevestigator:P46460
            GermOnline:ENSMUSG00000034187 Uniprot:P46460
        Length = 744

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 360


>RGD|621594 [details] [associations]
            symbol:Nsf "N-ethylmaleimide-sensitive factor" species:10116
            "Rattus norvegicus" [GO:0001921 "positive regulation of receptor
            recycling" evidence=ISO] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005795 "Golgi stack" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
            catabolic process" evidence=ISO;IDA;TAS] [GO:0006813 "potassium ion
            transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=TAS]
            [GO:0006944 "cellular membrane fusion" evidence=TAS] [GO:0007269
            "neurotransmitter secretion" evidence=TAS] [GO:0008022 "protein
            C-terminus binding" evidence=IPI] [GO:0014069 "postsynaptic
            density" evidence=IDA;TAS] [GO:0015031 "protein transport"
            evidence=IMP] [GO:0016192 "vesicle-mediated transport"
            evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA;TAS]
            [GO:0017137 "Rab GTPase binding" evidence=IDA] [GO:0017157
            "regulation of exocytosis" evidence=IMP] [GO:0019905 "syntaxin
            binding" evidence=ISO] [GO:0030165 "PDZ domain binding"
            evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
            [GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0043008
            "ATP-dependent protein binding" evidence=IPI] [GO:0043198
            "dendritic shaft" evidence=IDA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 RGD:621594 Pfam:PF02359 GO:GO:0005886
            GO:GO:0005524 GO:GO:0014069 GO:GO:0046872 GO:GO:0015031
            GO:GO:0043198 GO:GO:0005795 GO:GO:0016887 GO:GO:0006813
            eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0017137 GO:GO:0007269 GO:GO:0042623
            GO:GO:0006906 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
            SMART:SM01073 GO:GO:0017157 KO:K06027 HOGENOM:HOG000198544
            HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR EMBL:AF142097
            EMBL:AF189019 IPI:IPI00210635 RefSeq:NP_068516.1 UniGene:Rn.13345
            HSSP:P18708 ProteinModelPortal:Q9QUL6 SMR:Q9QUL6 IntAct:Q9QUL6
            STRING:Q9QUL6 PhosphoSite:Q9QUL6 World-2DPAGE:0004:Q9QUL6
            PRIDE:Q9QUL6 GeneID:60355 KEGG:rno:60355 UCSC:RGD:621594
            InParanoid:Q9QUL6 NextBio:612027 ArrayExpress:Q9QUL6
            Genevestigator:Q9QUL6 GermOnline:ENSRNOG00000003905 Uniprot:Q9QUL6
        Length = 744

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 360


>UNIPROTKB|F1LQ81 [details] [associations]
            symbol:Nsf "Vesicle-fusing ATPase" species:10116 "Rattus
            norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            RGD:621594 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
            IPI:IPI00210635 PRIDE:F1LQ81 Ensembl:ENSRNOT00000006361
            ArrayExpress:F1LQ81 Uniprot:F1LQ81
        Length = 744

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 360


>UNIPROTKB|F1P6Z3 [details] [associations]
            symbol:NSF "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0042623 "ATPase activity, coupled"
            evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
            [GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0019905
            "syntaxin binding" evidence=IEA] [GO:0006813 "potassium ion
            transport" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001921
            "positive regulation of receptor recycling" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005737 GO:GO:0006813 GO:GO:0001921
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
            InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            GeneTree:ENSGT00530000064085 EMBL:AAEX03006344
            Ensembl:ENSCAFT00000021409 Uniprot:F1P6Z3
        Length = 745

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   257 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 313

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   314 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 361


>UNIPROTKB|F1MZU2 [details] [associations]
            symbol:NSF "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0042623 "ATPase activity, coupled" evidence=IEA]
            [GO:0032403 "protein complex binding" evidence=IEA] [GO:0030165
            "PDZ domain binding" evidence=IEA] [GO:0019905 "syntaxin binding"
            evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0001921 "positive regulation of receptor
            recycling" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
            OMA:IFTLRTH EMBL:DAAA02049275 EMBL:DAAA02049276 IPI:IPI00721227
            Ensembl:ENSBTAT00000011107 Uniprot:F1MZU2
        Length = 746

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 40/109 (36%), Positives = 56/109 (51%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTLLA+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
                  A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 360


>ZFIN|ZDB-GENE-050808-1 [details] [associations]
            symbol:nsfb "N-ethylmaleimide-sensitive factor b"
            species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
            ZFIN:ZDB-GENE-050808-1 GO:GO:0005524 GO:GO:0017111
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            KO:K06027 HOVERGEN:HBG000324 EMBL:DQ022212 IPI:IPI00862410
            RefSeq:NP_001019625.1 UniGene:Dr.94035 ProteinModelPortal:Q4U0S6
            SMR:Q4U0S6 GeneID:554200 KEGG:dre:554200 CTD:554200
            NextBio:20880726 Uniprot:Q4U0S6
        Length = 747

 Score = 120 (47.3 bits), Expect = 0.0010, P = 0.0010
 Identities = 39/109 (35%), Positives = 57/109 (52%)

Query:   328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
             +LL GP G GKTL+A+ + + +N   P V+     L +  YVGE  E+ + KL A AE  
Sbjct:   256 ILLFGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312

Query:   386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
              +   A  G+  +  DE+D I K+  S+  S  V    V Q LL  ++G
Sbjct:   313 QKRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDG 360


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      678       564   0.00078  120 3  11 22  0.41    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  123
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  283 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  44.61u 0.09s 44.70t   Elapsed:  00:00:02
  Total cpu time:  44.63u 0.09s 44.72t   Elapsed:  00:00:02
  Start:  Fri May 10 03:26:26 2013   End:  Fri May 10 03:26:28 2013
WARNINGS ISSUED:  1
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT1G33360 AT1G33360 AT1G33360	protein from Arabidopsis thaliana	8.4e-175
BLAST match view associations BLAST with AT5G49840 AT5G49840 AT5G49840	protein from Arabidopsis thaliana	1.3e-154
BLAST match view associations BLAST with CLPX CLPX CLPX CLP protease regulatory subunit X	protein from Arabidopsis thaliana	1.8e-151
BLAST match view associations BLAST with SPO_1004 SPO_1004 SPO_1004 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Ruegeria pomeroyi DSS-3	3.5e-98
BLAST match view associations BLAST with SO_1795 SO_1795 SO_1795 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Shewanella oneidensis MR-1	9.4e-98
BLAST match view associations BLAST with CHY_0326 CHY_0326 CHY_0326 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Carboxydothermus hydrogenoformans Z-2901	3.2e-97
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Caulobacter crescentus CB15	5.9e-96
BLAST match view associations BLAST with clpX clpX clpX ClpX	protein from Escherichia coli K-12	1.4e-94
BLAST match view associations BLAST with CPS_3784 CPS_3784 CPS_3784 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Colwellia psychrerythraea 34H	6.1e-94
BLAST match view associations BLAST with CBU_0739 CBU_0739 CBU_0739 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Coxiella burnetii RSA 493	7.8e-94
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Vibrio cholerae O1 biovar El Tor str. N16961	2.1e-93
BLAST match view associations BLAST with VC_1921 VC_1921 VC_1921 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Vibrio cholerae O1 biovar El Tor	2.1e-93
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Mycobacterium tuberculosis	3.8e-93
BLAST match view associations BLAST with APH_0969 APH_0969 APH_0969 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Anaplasma phagocytophilum HZ	1.6e-92
BLAST match view associations BLAST with ECH_0900 ECH_0900 ECH_0900 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Ehrlichia chaffeensis str. Arkansas	3.9e-92
BLAST match view associations BLAST with GSU_1791 GSU_1791 GSU_1791 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Geobacter sulfurreducens PCA	8.9e-92
BLAST match view associations BLAST with BA_4704 BA_4704 BA_4704 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Bacillus anthracis str. Ames	1.1e-91
BLAST match view associations BLAST with Clpx Clpx Clpx caseinolytic peptidase X (E.coli)	protein from Mus musculus	1.2e-89
BLAST match view associations BLAST with Clpx Clpx Clpx ClpX caseinolytic peptidase X homolog (E. coli)	gene from Rattus norvegicus	1.5e-89
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Bos taurus	2.4e-89
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Canis lupus familiaris	2.4e-89
BLAST match view associations BLAST with CLPX CLPX CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	protein from Homo sapiens	2.4e-89
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Sus scrofa	2.4e-89
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Gallus gallus	3.0e-89
BLAST match view associations BLAST with NSE_0753 NSE_0753 NSE_0753 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Neorickettsia sennetsu str. Miyayama	2.0e-88
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Gallus gallus	2.7e-88
BLAST match view associations BLAST with clpxa clpxa clpxa ClpX caseinolytic peptidase X homolog a	gene_product from Danio rerio	2.4e-87
BLAST match view associations BLAST with CJE_0324 CJE_0324 CJE_0324 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Campylobacter jejuni RM1221	2.0e-86
BLAST match view associations BLAST with D2030.2 D2030.2 D2030.2	gene from Caenorhabditis elegans	3.2e-77
BLAST match view associations BLAST with MCX1 MCX1 MCX1 Mitochondrial matrix protein	gene from Saccharomyces cerevisiae	1.1e-71
BLAST match view associations BLAST with CG4538 CG4538 CG4538	protein from Drosophila melanogaster	1.4e-71
BLAST match view associations BLAST with K07A3.3 K07A3.3 K07A3.3	gene from Caenorhabditis elegans	3.3e-65
BLAST match view associations BLAST with hslU hslU hslU ATP-dependent protease ATPase subunit HslU	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.7e-34
BLAST match view associations BLAST with VC_2674 VC_2674 VC_2674 protease HslVU, ATPase subunit HslU	protein from Vibrio cholerae O1 biovar El Tor	1.7e-34
BLAST match view associations BLAST with SO_4163 SO_4163 SO_4163 heat shock protein HslVU, ATPase subunit HslU	protein from Shewanella oneidensis MR-1	7.9e-34
BLAST match view associations BLAST with CBU_2012 CBU_2012 CBU_2012 heat shock protein HslVU, ATPase subunit HslU	protein from Coxiella burnetii RSA 493	1.4e-33
BLAST match view associations BLAST with CHY_1790 CHY_1790 CHY_1790 heat shock protein HslVU, ATPase subunit HslU	protein from Carboxydothermus hydrogenoformans Z-2901	8.5e-29
BLAST match view associations BLAST with CJE_0764 CJE_0764 CJE_0764 heat shock protein HslVU, ATPase subunit HslU	protein from Campylobacter jejuni RM1221	1.5e-27
BLAST match view associations BLAST with hslU hslU hslU	gene from Escherichia coli K-12	5.4e-26
BLAST match view associations BLAST with SPO_3882 SPO_3882 SPO_3882 heat shock protein HslVU, ATPase subunit HslU	protein from Ruegeria pomeroyi DSS-3	1.5e-25
BLAST match view associations BLAST with CPS_4370 CPS_4370 CPS_4370 heat shock protein HslVU, ATPase subunit HslU	protein from Colwellia psychrerythraea 34H	2.2e-24
BLAST match view associations BLAST with ECH_0997 ECH_0997 ECH_0997 heat shock protein HslVU, ATPase subunit HslU	protein from Ehrlichia chaffeensis str. Arkansas	3.3e-24
BLAST match view associations BLAST with DDB_G0288593 DDB_G0288593 DDB_G0288593 ATP-dependent hsl protease ATP-binding subunit hslU	gene from Dictyostelium discoideum	1.1e-23
BLAST match view associations BLAST with NSE_0177 NSE_0177 NSE_0177 heat shock protein HslVU, ATPase subunit HslU	protein from Neorickettsia sennetsu str. Miyayama	1.5e-23
BLAST match view associations BLAST with hslU hslU hslU ATP-dependent protease ATPase subunit HslU	protein from Haemophilus influenzae Rd KW20	2.5e-23
BLAST match view associations BLAST with APH_1074 APH_1074 APH_1074 ATP-dependent Hsl protease, ATP-binding subunit HslU	protein from Anaplasma phagocytophilum HZ	1.3e-22
BLAST match view associations BLAST with CLPX CLPX CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	protein from Homo sapiens	5.0e-08
BLAST match view associations BLAST with CHY_2164 CHY_2164 CHY_2164 ATPase, AAA family	protein from Carboxydothermus hydrogenoformans Z-2901	2.1e-07
BLAST match view associations BLAST with I3LI39 I3LI39 I3LI39 Uncharacterized protein	protein from Sus scrofa	1.3e-06
BLAST match view associations BLAST with psmc4 psmc4 psmc4 proteasome (prosome, macropain) 26S subunit, ATPase, 4	gene_product from Danio rerio	4.5e-05
BLAST match view associations BLAST with psmC4 psmC4 psmC4 HIV TAT binding-protein-related	gene from Dictyostelium discoideum	9.0e-05
BLAST match view associations BLAST with katna1 katna1 katna1 katanin p60 (ATPase-containing) subunit A 1	gene_product from Danio rerio	0.00012
BLAST match view associations BLAST with RPT6A RPT6A RPT6A regulatory particle triple-A ATPase 6A	protein from Arabidopsis thaliana	0.00013
BLAST match view associations BLAST with AT5G20000 AT5G20000 AT5G20000	protein from Arabidopsis thaliana	0.00013
BLAST match view associations BLAST with psmC5 psmC5 psmC5 HIV TAT binding-protein-related	gene from Dictyostelium discoideum	0.00015
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Uncharacterized protein	protein from Sus scrofa	0.00017
BLAST match view associations BLAST with PFL1925w PFL1925w PFL1925w cell division protein FtsH, putative	gene from Plasmodium falciparum	0.00021
BLAST match view associations BLAST with PFL1925w PFL1925w PFL1925w Cell division protein FtsH, putative	protein from Plasmodium falciparum 3D7	0.00021
BLAST match view associations BLAST with SPAST SPAST SPAST Spastin	protein from Gallus gallus	0.00022
BLAST match view associations BLAST with SPATA5L1 SPATA5L1 SPATA5L1 Uncharacterized protein	protein from Gallus gallus	0.00022
BLAST match view associations BLAST with CJE_1085 CJE_1085 CJE_1085 cell division protein FtsH, putative	protein from Campylobacter jejuni RM1221	0.00023
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 26S protease regulatory subunit 6B	protein from Bos taurus	0.00026
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 26S protease regulatory subunit 6B	protein from Bos taurus	0.00026
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 Uncharacterized protein	protein from Canis lupus familiaris	0.00026
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 26S protease regulatory subunit 6B	protein from Homo sapiens	0.00026
BLAST match view associations BLAST with PSMC4 PSMC4 PSMC4 26S protease regulatory subunit 6B	protein from Macaca fascicularis	0.00026
BLAST match view associations BLAST with Psmc4 Psmc4 Psmc4 proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein from Mus musculus	0.00026
BLAST match view associations BLAST with Psmc4 Psmc4 Psmc4 proteasome (prosome, macropain) 26S subunit, ATPase, 4	gene from Rattus norvegicus	0.00026
BLAST match view associations BLAST with AFG3L2 AFG3L2 AFG3L2 Uncharacterized protein	protein from Sus scrofa	0.00027
BLAST match view associations BLAST with SPAST SPAST SPAST Spastin	protein from Bos taurus	0.00027
BLAST match view associations BLAST with Spast Spast Spast spastin	gene from Rattus norvegicus	0.00028
BLAST match view associations BLAST with Spast Spast Spast Spastin	protein from Rattus norvegicus	0.00028
BLAST match view associations BLAST with RPT4 RPT4 RPT4	gene_product from Candida albicans	0.00035
BLAST match view associations BLAST with CG3326 CG3326 CG3326	protein from Drosophila melanogaster	0.00037
BLAST match view associations BLAST with SPAST SPAST SPAST Spastin	protein from Sus scrofa	0.00038
BLAST match view associations BLAST with nsf-1 nsf-1 nsf-1	gene from Caenorhabditis elegans	0.00041
BLAST match view associations BLAST with nsf-1 nsf-1 nsf-1 Vesicle-fusing ATPase	protein from Caenorhabditis elegans	0.00041
BLAST match view associations BLAST with spast spast spast spastin	gene_product from Danio rerio	0.00042
BLAST match view associations BLAST with RPT4 RPT4 RPT4 ATPase of the 19S regulatory particle of the 26S proteasome	gene from Saccharomyces cerevisiae	0.00047
BLAST match view associations BLAST with MGG_05193 MGG_05193 MGG_05193 Cell division control protein 48	protein from Magnaporthe oryzae 70-15	0.00053
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Canis lupus familiaris	0.00056
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Canis lupus familiaris	0.00056
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Uncharacterized protein	protein from Bos taurus	0.00056
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Uncharacterized protein	protein from Canis lupus familiaris	0.00056
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Katanin p60 ATPase-containing subunit A1	protein from Homo sapiens	0.00056
BLAST match view associations BLAST with KATNA1 KATNA1 KATNA1 Katanin p60 ATPase-containing subunit A1	protein from Macaca fascicularis	0.00056
BLAST match view associations BLAST with Katna1 Katna1 Katna1 katanin p60 (ATPase-containing) subunit A1	gene from Rattus norvegicus	0.00056
BLAST match view associations BLAST with F56F11.4 F56F11.4 F56F11.4	gene from Caenorhabditis elegans	0.00059
BLAST match view associations BLAST with PFL2345c PFL2345c PFL2345c tat-binding protein homolog	gene from Plasmodium falciparum	0.00060
BLAST match view associations BLAST with PFL2345c PFL2345c PFL2345c Tat-binding protein homolog	protein from Plasmodium falciparum 3D7	0.00060
BLAST match view associations BLAST with psmc5 psmc5 psmc5 26S protease regulatory subunit 8	protein from Xenopus laevis	0.00065
BLAST match view associations BLAST with CDC48 CDC48 CDC48 cell division cycle 48	protein from Arabidopsis thaliana	0.00067