BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005762
(678 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1GGF7|CLPX_RUEST ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria sp.
(strain TM1040) GN=clpX PE=3 SV=1
Length = 421
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/381 (55%), Positives = 280/381 (73%), Gaps = 25/381 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGMKATDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREE 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
AGV + +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNA
Sbjct: 277 SDAGVGET------FRDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 609
L KQY+RLF + + +L FT++AL IAKKA + TGARGLR+ILE IL + M+E+P
Sbjct: 331 LVKQYQRLFELEDTELDFTDEALSAIAKKAIERKTGARGLRSILEDILLDTMFELP---- 386
Query: 610 GSDGVDAVVVDEESVGSVDAP 630
G + V VVV+EE+V S P
Sbjct: 387 GMESVTKVVVNEEAVCSEAQP 407
>sp|Q5LUP9|CLPX_RUEPO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria
pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
GN=clpX PE=3 SV=1
Length = 424
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/370 (56%), Positives = 277/370 (74%), Gaps = 25/370 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 65 VPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VRA+ GV
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERGV------ 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL KQY+RLF +
Sbjct: 284 GELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFEL 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
+ +L FT+ AL+ IAK+A + TGARGLR+I+E IL + M+++P + D V VVV+
Sbjct: 344 EDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDLPSM----DNVTKVVVN 399
Query: 621 EESVGSVDAP 630
EE+V S P
Sbjct: 400 EEAVTSDAQP 409
>sp|Q11J59|CLPX_MESSB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Mesorhizobium sp. (strain BNC1) GN=clpX PE=3 SV=1
Length = 424
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/369 (57%), Positives = 276/369 (74%), Gaps = 30/369 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI + LD +VIGQ AK+VLSVAV+NHYKR+ HA G A
Sbjct: 63 EGVPTPQEIMEVLDDYVIGQTYAKRVLSVAVHNHYKRLAHA----GKNA----------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELSKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT ILFICGGAF LEK IS+R + +SIGFGA V + + RAG
Sbjct: 227 GGRKHPQQEFLQVDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSPEDRRAG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
LL VE DL+ +GLIPEFVGR PIL +L L E+ LV++LTEPKNAL KQY+R
Sbjct: 284 -----ELLRQVEPEDLLKFGLIPEFVGRLPILATLEDLDEEALVQILTEPKNALVKQYQR 338
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDA 616
LF M NV+L F E ALR IA+KA + TGARGLR+I+E+IL + M+E+P + +GV
Sbjct: 339 LFEMENVELTFHENALRAIARKAIERKTGARGLRSIMEAILLDTMFELPAL----EGVQE 394
Query: 617 VVVDEESVG 625
VV+ E+ V
Sbjct: 395 VVISEDVVA 403
>sp|Q165G0|CLPX_ROSDO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Roseobacter
denitrificans (strain ATCC 33942 / OCh 114) GN=clpX PE=3
SV=1
Length = 421
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/381 (55%), Positives = 279/381 (73%), Gaps = 26/381 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 609
L KQY+RLF + + +L FT+ AL IAK+A + TGARGLR+ILE IL + M+++P
Sbjct: 330 LVKQYQRLFELEDTELTFTDDALSAIAKRAIERKTGARGLRSILEDILLDTMFDLP---- 385
Query: 610 GSDGVDAVVVDEESVGSVDAP 630
G + V VVV+EE+V S AP
Sbjct: 386 GLESVTEVVVNEEAVNSDAAP 406
>sp|O67356|CLPX_AQUAE ATP-dependent Clp protease ATP-binding subunit ClpX OS=Aquifex
aeolicus (strain VF5) GN=clpX PE=3 SV=1
Length = 412
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/374 (56%), Positives = 278/374 (74%), Gaps = 28/374 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P++I K LD++VIGQE+AKK+LSVAVYNHYKRI K A +
Sbjct: 57 KDIPKPEQIKKILDEYVIGQERAKKILSVAVYNHYKRI-------------KAKEAGLSL 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VELEKSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE++L +L
Sbjct: 104 DDVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTIVNVP 436
L +++V+AAQ+G+VYIDE+DKI KK+ +N I+RDVSGEGVQQALLK++EG++VNVP
Sbjct: 164 LQACDYDVKAAQKGIVYIDEIDKIAKKS-GINPSITRDVSGEGVQQALLKIVEGSVVNVP 222
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP + IQ+DT DILFICGGAFV LE I +R S +GF A ++ +
Sbjct: 223 PQGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDKE---- 278
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
LLE VE DLI +G+IPEF+GRFP++ +L LTED+LV++L EPKNAL KQY++
Sbjct: 279 ----QDLLELVEPDDLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPKNALVKQYQK 334
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDA 616
LF + VKL FTEKALR IAK+A + TGARGLRAI+E I+ + M+E+P + GV
Sbjct: 335 LFELEGVKLTFTEKALREIAKEAIRRKTGARGLRAIMEDIMADIMFEVPSLP----GVKE 390
Query: 617 VVVDEESVGSVDAP 630
V++DE V + + P
Sbjct: 391 VIIDENVVKNKEKP 404
>sp|Q89KG2|CLPX_BRAJA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium japonicum (strain USDA 110) GN=clpX
PE=3 SV=1
Length = 423
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/372 (56%), Positives = 272/372 (73%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL +A+KA + TGARGLR+ILE+IL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILEAILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESVGSVDAP 630
+ E V P
Sbjct: 395 ISREVVEGTARP 406
>sp|B3Q7P4|CLPX_RHOPT ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain TIE-1) GN=clpX
PE=3 SV=1
Length = 424
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/372 (56%), Positives = 272/372 (73%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESVGSVDAP 630
+ E V P
Sbjct: 395 ISREVVDGTARP 406
>sp|Q6N5L4|CLPX_RHOPA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=clpX PE=3 SV=1
Length = 424
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/372 (56%), Positives = 272/372 (73%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESVGSVDAP 630
+ E V P
Sbjct: 395 ISREVVDGTARP 406
>sp|A5EKA7|CLPX_BRASB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=clpX PE=3 SV=1
Length = 424
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/366 (57%), Positives = 270/366 (73%), Gaps = 30/366 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESV 624
+ E V
Sbjct: 395 ISREVV 400
>sp|Q2W3I0|CLPX_MAGSA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=clpX PE=3 SV=1
Length = 421
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/396 (53%), Positives = 280/396 (70%), Gaps = 41/396 (10%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPKDICQVLDDYVIGQSHAKKVLSVAVHNHYKRLQHGG----------------KNNE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGRGTSIGFGADVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P+L +L L D L+ +L++PKNAL KQY+RLF M
Sbjct: 281 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
+ +L F++ AL+ IA+KA A+ TGARGLR+I+E+IL + M+++P G D VD VV++
Sbjct: 341 EDTRLAFSDDALKAIAEKAIARKTGARGLRSIMETILLDTMFDLP----GLDAVDEVVIN 396
Query: 621 EESVGSVDAPGCGGKILRGEGALERYLVEAERRESA 656
+E V EG + + AERRE
Sbjct: 397 KEVV---------------EGRAKPLYIYAERREDV 417
>sp|B8EIL3|CLPX_METSB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Methylocella
silvestris (strain BL2 / DSM 15510 / NCIMB 13906)
GN=clpX PE=3 SV=1
Length = 421
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/359 (57%), Positives = 270/359 (75%), Gaps = 26/359 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPKEICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVV 619
N +L F ++AL V+AKKA + TGARGLR+I+E IL + M+++P G D V+ VV+
Sbjct: 341 ENTELSFQDEALNVVAKKAIERRTGARGLRSIMEGILLDTMFDLP----GLDSVEQVVI 395
>sp|B2IGP2|CLPX_BEII9 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Beijerinckia
indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB
8712) GN=clpX PE=3 SV=1
Length = 421
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/359 (56%), Positives = 270/359 (75%), Gaps = 26/359 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPREICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKTTSIGFAASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVV 619
N +L F ++AL V+AKKA + TGARGLR+I+ESIL + M+++P G D V+ VV+
Sbjct: 341 ENTELTFQDEALNVVAKKAIERKTGARGLRSIMESILLDTMFDLP----GLDSVEQVVI 395
>sp|B6JGU8|CLPX_OLICO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Oligotropha
carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
GN=clpX PE=3 SV=1
Length = 424
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/372 (56%), Positives = 271/372 (72%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQAHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAASVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESVGSVDAP 630
+ E V + P
Sbjct: 395 ISREVVEATARP 406
>sp|Q47FB7|CLPX_DECAR ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Dechloromonas aromatica (strain RCB) GN=clpX PE=3
SV=1
Length = 420
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/365 (56%), Positives = 265/365 (72%), Gaps = 24/365 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQE AK++LSVAVYNHYKR+ H N
Sbjct: 60 DLPTPREISSILDQYVIGQEVAKRILSVAVYNHYKRLRHT---------------AKNAG 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +G
Sbjct: 165 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKVIQSRSERGGIGFGAEVKSK-----DDGKA 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E LV++LTEPKNAL KQY++LFS
Sbjct: 280 VGKILLDAEPEDLIKFGLIPELIGRLPVVATLQELEESALVQILTEPKNALVKQYQKLFS 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVV 619
M +V+L AL IAKKA A+ TGARGLR+ILE L + MYE+P G + V+ VV+
Sbjct: 340 MEDVELEIRPTALSAIAKKALARKTGARGLRSILEHALLDTMYELP----GMESVEKVVI 395
Query: 620 DEESV 624
DE ++
Sbjct: 396 DENTI 400
>sp|A1RL88|CLPX_SHESW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain W3-18-1) GN=clpX PE=3 SV=1
Length = 426
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/373 (57%), Positives = 272/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY L
Sbjct: 282 ATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V DGV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV----DGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVNGESAP 410
>sp|A4Y5I3|CLPX_SHEPC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=clpX PE=3
SV=1
Length = 426
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/373 (57%), Positives = 272/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY L
Sbjct: 282 ATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V DGV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV----DGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVNGESAP 410
>sp|Q2IWZ3|CLPX_RHOP2 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain HaA2) GN=clpX PE=3
SV=1
Length = 424
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/372 (56%), Positives = 271/372 (72%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESVGSVDAP 630
+ E V P
Sbjct: 395 ISREVVDGTARP 406
>sp|A6U7U8|CLPX_SINMW ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3
SV=1
Length = 425
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/372 (54%), Positives = 276/372 (74%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+P + +GV VV
Sbjct: 342 EMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPTL----EGVREVV 397
Query: 619 VDEESVGSVDAP 630
+ EE V P
Sbjct: 398 ISEEVVKGTARP 409
>sp|A4YVM3|CLPX_BRASO ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium sp. (strain ORS278) GN=clpX PE=3 SV=1
Length = 424
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/372 (56%), Positives = 271/372 (72%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL +++KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAVSRKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESVGSVDAP 630
+ E V P
Sbjct: 395 ISREVVEGTARP 406
>sp|Q215J1|CLPX_RHOPB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain BisB18) GN=clpX
PE=3 SV=1
Length = 424
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/366 (56%), Positives = 270/366 (73%), Gaps = 30/366 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESV 624
+ E V
Sbjct: 395 ISREVV 400
>sp|Q07NN5|CLPX_RHOP5 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain BisA53) GN=clpX
PE=3 SV=1
Length = 424
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/366 (56%), Positives = 270/366 (73%), Gaps = 30/366 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESV 624
+ E V
Sbjct: 395 ISREVV 400
>sp|B6ISY6|CLPX_RHOCS ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=clpX PE=3 SV=1
Length = 421
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/364 (57%), Positives = 275/364 (75%), Gaps = 26/364 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P++IC LD +VIGQE AK+VLSVAV+NHYKR+ H A ND
Sbjct: 63 VPSPRDICAVLDDYVIGQEHAKRVLSVAVHNHYKRLAHG--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ I+ R + +SIGFGA VRA D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIIAARGKGTSIGFGADVRA------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P++ +L L E+ L+++LT+PKNAL KQY+RLF M
Sbjct: 281 GDILREVEPEDLLKFGLIPEFVGRLPVVATLHDLDENALIEILTKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
+VKL E+ALR IA KA + TGARGLR+I+ESIL E M+++P G GV+ +V++
Sbjct: 341 EDVKLGIHEEALRSIAVKAIQRKTGARGLRSIMESILLEPMFDLP----GLQGVEEIVIN 396
Query: 621 EESV 624
+E V
Sbjct: 397 KEVV 400
>sp|A1S4X6|CLPX_SHEAM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpX PE=3
SV=1
Length = 425
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/371 (56%), Positives = 268/371 (72%), Gaps = 26/371 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 64 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLRNAG--------PK--------DG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVK-----GKEEKES 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DL+ YGLIPEF+GR P++ +L L ED L+++L+EPKNAL KQY LF
Sbjct: 283 MSDILSQVEPEDLVKYGLIPEFIGRLPVVATLAELDEDALIQILSEPKNALTKQYAALFE 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVV 619
M NV+L F E AL+ IA+KA ++ TGARGLR+I+E IL + MY++P GV VV
Sbjct: 343 MENVELEFREDALKAIAQKAMSRKTGARGLRSIVEGILLDTMYDLP----SQQGVSKAVV 398
Query: 620 DEESVGSVDAP 630
DE V AP
Sbjct: 399 DESVVKGESAP 409
>sp|Q135W8|CLPX_RHOPS ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain BisB5) GN=clpX
PE=3 SV=1
Length = 424
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/372 (56%), Positives = 271/372 (72%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESVGSVDAP 630
+ E V P
Sbjct: 395 ISREVVDGTARP 406
>sp|A1W5B7|CLPX_ACISJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Acidovorax
sp. (strain JS42) GN=clpX PE=3 SV=1
Length = 421
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/371 (55%), Positives = 270/371 (72%), Gaps = 24/371 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPAEIKTNLDHYVIGQEKAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA VR+ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFQDIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVV 619
M V+L AL+ IA+KA A+ TGARGLR+ILE L M+++P+V V+ VVV
Sbjct: 344 MEGVELEIRPAALKSIARKAIARKTGARGLRSILEQALIGTMFDLPNV----SNVEKVVV 399
Query: 620 DEESVGSVDAP 630
DE ++ AP
Sbjct: 400 DEATIEENKAP 410
>sp|B9MG15|CLPX_ACIET ATP-dependent Clp protease ATP-binding subunit ClpX OS=Acidovorax
ebreus (strain TPSY) GN=clpX PE=3 SV=1
Length = 421
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/371 (55%), Positives = 270/371 (72%), Gaps = 24/371 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPAEIKTNLDHYVIGQEKAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA VR+ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFQDIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVV 619
M V+L AL+ IA+KA A+ TGARGLR+ILE L M+++P+V V+ VVV
Sbjct: 344 MEGVELEIRPAALKSIARKAIARKTGARGLRSILEQALIGTMFDLPNV----SNVEKVVV 399
Query: 620 DEESVGSVDAP 630
DE ++ AP
Sbjct: 400 DEATIEENKAP 410
>sp|Q1QL77|CLPX_NITHX ATP-dependent Clp protease ATP-binding subunit ClpX OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=clpX PE=3 SV=1
Length = 424
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/366 (57%), Positives = 270/366 (73%), Gaps = 30/366 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL IA+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAIARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESV 624
+ E V
Sbjct: 395 ISREVV 400
>sp|Q8EG18|CLPX_SHEON ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
oneidensis (strain MR-1) GN=clpX PE=3 SV=1
Length = 426
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/373 (56%), Positives = 271/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY L
Sbjct: 282 ATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP + DGV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSI----DGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVNGESAP 410
>sp|A5FX05|CLPX_ACICJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Acidiphilium
cryptum (strain JF-5) GN=clpX PE=3 SV=1
Length = 418
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 275/364 (75%), Gaps = 30/364 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ+ AK++LSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKVLDDYVIGQDHAKRILSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA VR R G
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQRTG----- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF
Sbjct: 281 ---AILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M VKL+FTE AL+V+A +A + TGARGLR+I+E+IL E M+++P G D V+ VV
Sbjct: 338 EMEGVKLNFTEDALKVVAARAIQRKTGARGLRSIMENILLETMFDLP----GLDSVEEVV 393
Query: 619 VDEE 622
++ E
Sbjct: 394 INGE 397
>sp|Q5NH46|CLPX_FRATT ATP-dependent Clp protease ATP-binding subunit ClpX OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=clpX PE=3 SV=1
Length = 417
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/409 (52%), Positives = 275/409 (67%), Gaps = 29/409 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF + V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNSDVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEIPDVKTGSDGVDAVVVDEESVGSVDAPGCGGK 635
RGLR ILE++L E M+ IP S+ ++ V+++++ + P K
Sbjct: 362 RGLRTILENVLLEVMFHIP----SSEDIEKVIINDKVILEQQEPILATK 406
>sp|A7HY53|CLPX_PARL1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=clpX PE=3 SV=1
Length = 421
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/364 (56%), Positives = 278/364 (76%), Gaps = 26/364 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EIC LD +VIGQ+ AK+VLSVAV+NHYKR+ HA A +ND
Sbjct: 63 VPSPQEICGVLDDYVIGQQHAKRVLSVAVHNHYKRLNHA--------------AKNND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R + + IGFGA V++ V D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGQRGKGAGIGFGAKVQS-----VEDRR-T 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ +E DL+ +GLIPEFVGR P+L +L L E+ L+ +LT+PKNAL KQY+RLF M
Sbjct: 281 GDILKDLEPEDLLKFGLIPEFVGRMPVLATLEDLDEEALLTILTQPKNALVKQYERLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
NV+L F+E+ALR +++KA + TGARGLR+ILESIL + M+E+P + +GV+ VV+
Sbjct: 341 ENVRLTFSEEALRAVSRKAIERKTGARGLRSILESILLDTMFELPTL----EGVEEVVIS 396
Query: 621 EESV 624
E V
Sbjct: 397 AEVV 400
>sp|B5ZY09|CLPX_RHILW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
leguminosarum bv. trifolii (strain WSM2304) GN=clpX PE=3
SV=1
Length = 425
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 284/400 (71%), Gaps = 41/400 (10%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P + +GV VV+
Sbjct: 344 EDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTL----EGVREVVIS 399
Query: 621 EESVGSVDAPGCGGKILRGEGALERYLVEAERRESAENAS 660
EE V G+ + A+R+E NAS
Sbjct: 400 EEVV---------------RGSARPLYIYADRQEEKANAS 424
>sp|B0UD19|CLPX_METS4 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Methylobacterium sp. (strain 4-46) GN=clpX PE=3 SV=1
Length = 423
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/364 (57%), Positives = 272/364 (74%), Gaps = 26/364 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHA--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +VE DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRAVEPEDLLKFGLIPEFVGRLPVLATLEDLDETALKRILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++P G D V+ VV+
Sbjct: 341 ENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDLP----GLDSVEQVVIG 396
Query: 621 EESV 624
E V
Sbjct: 397 PEVV 400
>sp|A9KWH8|CLPX_SHEB9 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
baltica (strain OS195) GN=clpX PE=3 SV=1
Length = 426
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/373 (56%), Positives = 272/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +A+ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNAS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGIELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY L
Sbjct: 282 ATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V DGV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV----DGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVKGESAP 410
>sp|A3D306|CLPX_SHEB5 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
baltica (strain OS155 / ATCC BAA-1091) GN=clpX PE=3 SV=1
Length = 426
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/373 (56%), Positives = 272/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +A+ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNAS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGIELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY L
Sbjct: 282 ATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V DGV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV----DGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVKGESAP 410
>sp|B8E5E8|CLPX_SHEB2 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
baltica (strain OS223) GN=clpX PE=3 SV=1
Length = 426
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/373 (56%), Positives = 272/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +A+ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNAS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGIELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY L
Sbjct: 282 ATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V DGV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV----DGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVKGESAP 410
>sp|Q92QQ2|CLPX_RHIME ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
meliloti (strain 1021) GN=clpX PE=3 SV=1
Length = 425
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/372 (54%), Positives = 276/372 (74%), Gaps = 30/372 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+P + +GV VV
Sbjct: 342 EMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPTL----EGVREVV 397
Query: 619 VDEESVGSVDAP 630
+ +E V P
Sbjct: 398 ISDEVVKGTARP 409
>sp|A6WLQ2|CLPX_SHEB8 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
baltica (strain OS185) GN=clpX PE=3 SV=1
Length = 426
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/373 (56%), Positives = 272/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +A+ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNAS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGIELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY L
Sbjct: 282 ATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V DGV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV----DGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVKGESAP 410
>sp|Q1MIM6|CLPX_RHIL3 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=clpX PE=3 SV=1
Length = 425
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 285/400 (71%), Gaps = 41/400 (10%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V++ D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGASVKSQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
+V+L+F E ALR IA+KA + TGARGLR+I+E IL + M+E+P + +GV VV+
Sbjct: 344 EDVELNFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTL----EGVREVVIS 399
Query: 621 EESVGSVDAPGCGGKILRGEGALERYLVEAERRESAENAS 660
EE V G+ + A+R+E NAS
Sbjct: 400 EEVV---------------RGSARPLYIYADRQEEKANAS 424
>sp|Q2K9U6|CLPX_RHIEC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
etli (strain CFN 42 / ATCC 51251) GN=clpX PE=3 SV=1
Length = 425
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 284/400 (71%), Gaps = 41/400 (10%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P + +GV VV+
Sbjct: 344 EDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTL----EGVREVVIS 399
Query: 621 EESVGSVDAPGCGGKILRGEGALERYLVEAERRESAENAS 660
EE V G+ + A+R+E NAS
Sbjct: 400 EEVV---------------RGSARPLYIYADRQEEKANAS 424
>sp|B3PVY5|CLPX_RHIE6 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
etli (strain CIAT 652) GN=clpX PE=3 SV=1
Length = 425
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 284/400 (71%), Gaps = 41/400 (10%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P + +GV VV+
Sbjct: 344 EDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTL----EGVREVVIS 399
Query: 621 EESVGSVDAPGCGGKILRGEGALERYLVEAERRESAENAS 660
EE V G+ + A+R+E NAS
Sbjct: 400 EEVV---------------RGSARPLYIYADRQEEKANAS 424
>sp|Q3SRD3|CLPX_NITWN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=clpX PE=3
SV=1
Length = 424
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/366 (56%), Positives = 270/366 (73%), Gaps = 30/366 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVV 618
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P G +GV+ VV
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLP----GLEGVEEVV 394
Query: 619 VDEESV 624
+ E V
Sbjct: 395 ISREVV 400
>sp|A1U1Q2|CLPX_MARAV ATP-dependent Clp protease ATP-binding subunit ClpX OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=clpX
PE=3 SV=1
Length = 427
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 272/364 (74%), Gaps = 25/364 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+++VIGQ++AK VLSVAVYNHYKR L+ G G +
Sbjct: 67 LPTPAEIRETLNEYVIGQDRAKVVLSVAVYNHYKR-----LRYGEGKS-----------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + SSIGF A V++ D+ T
Sbjct: 231 RKHPQQEFLQVDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ-----DDSKST 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++ VE+ DL+ +GLIPEFVGR P++ +LT L E+ LV++LTEPKNAL KQY++LF M
Sbjct: 286 GDIIREVETEDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDM 345
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
V+L F E ALR +A+KA + TGARGLR+I+E+ L + MY+IP V VV+D
Sbjct: 346 EGVELDFREDALRAVARKAMERKTGARGLRSIMEATLLDTMYQIP----SEHDVSKVVID 401
Query: 621 EESV 624
E +
Sbjct: 402 ESVI 405
>sp|Q12LA2|CLPX_SHEDO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
GN=clpX PE=3 SV=1
Length = 426
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/367 (56%), Positives = 271/367 (73%), Gaps = 26/367 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD++VIGQ+KAKKVL+VAVYNHYKR+ + K+G
Sbjct: 63 DKLPTPHELRNHLDEYVIGQDKAKKVLAVAVYNHYKRLRNGTTKEG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 --VELGKSNILLIGPTGSGKTLLAETLARSLNVPFAMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R + IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHTGTGIGFGAEVK-----GEQDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S +L VE DL+ YGLIPEF+GR P++ +LT L E L+++L++PKNAL KQY L
Sbjct: 282 ATISQILGQVEPEDLVKYGLIPEFIGRLPVVATLTELDESALIQILSQPKNALTKQYGAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M NV+L F E AL+ IAKKA ++ TGARGLR+I+E IL + MY++P VK GV
Sbjct: 342 FEMENVELEFREDALKAIAKKAMSRKTGARGLRSIVEGILLDTMYDLPTVK----GVVKA 397
Query: 618 VVDEESV 624
V+DE V
Sbjct: 398 VIDESVV 404
>sp|B1Z9C8|CLPX_METPB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB
13946 / BJ001) GN=clpX PE=3 SV=1
Length = 423
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/370 (55%), Positives = 275/370 (74%), Gaps = 26/370 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++P G D V+ VV+
Sbjct: 341 ENVELTFQDEALGLVARKAIERKTGARGLRSILETILLDTMYDLP----GLDSVEQVVIG 396
Query: 621 EESVGSVDAP 630
E V P
Sbjct: 397 PEVVDGKSKP 406
>sp|Q0C0G0|CLPX_HYPNA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Hyphomonas
neptunium (strain ATCC 15444) GN=clpX PE=3 SV=1
Length = 420
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 272/364 (74%), Gaps = 26/364 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK++LSVAV+NHYKR+ HA D
Sbjct: 64 VPTPQEICDVLDDYVIGQRYAKRILSVAVHNHYKRLSHAG----------------KTDG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I+ R +++SIGFGA +++ GV D
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAARGENASIGFGATIKSGEERGVGDT--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L VE DL +GLIPEF+GR P+L +L L E L+++LT+PKNAL KQY+RLF M
Sbjct: 285 ---LREVEPEDLQKFGLIPEFIGRLPVLATLEDLDEKALIQILTQPKNALLKQYQRLFDM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
+V+L FT +AL +A++A + TGARGLR+I+ESIL + M+E+P+++ GV+ VV++
Sbjct: 342 ESVQLTFTPEALVAVARRAITRKTGARGLRSIMESILLDTMFELPNLR----GVEEVVIN 397
Query: 621 EESV 624
E V
Sbjct: 398 AEVV 401
>sp|A1K782|CLPX_AZOSB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Azoarcus sp.
(strain BH72) GN=clpX PE=3 SV=1
Length = 422
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 268/364 (73%), Gaps = 25/364 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC+ LD++VIGQ +AK+ LSVAVYNHYKR+ H SG + D
Sbjct: 64 LPTPHEICQILDQYVIGQAQAKRNLSVAVYNHYKRLRHL-----SGRQ----------DE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI ++P +G
Sbjct: 169 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT ++LFICGGAF L+K I R + IGFGA V++ +T+
Sbjct: 229 RKHPNQDFIQVDTTNVLFICGGAFDGLDKVIRNRTEKMGIGFGAEVKSRQGKNLTET--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
VE DL+ +GLIPEFVGR P++ +L L ED L+++L EPKNAL KQY++LFSM
Sbjct: 286 ---FRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEDALIQILIEPKNALVKQYQKLFSM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAVVVD 620
V L AL +A+KA + TGARGLR+ILE+ L + MY++P + DGV+ VVVD
Sbjct: 343 EGVDLEIRPAALHAVARKAIKRKTGARGLRSILEAALLDIMYDLPQL----DGVEKVVVD 398
Query: 621 EESV 624
E ++
Sbjct: 399 ENTI 402
>sp|Q0HTK8|CLPX_SHESR ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain MR-7) GN=clpX PE=3 SV=1
Length = 426
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/373 (56%), Positives = 271/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY L
Sbjct: 282 ATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP + +GV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSI----EGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVNGESAP 410
>sp|Q0HHA2|CLPX_SHESM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain MR-4) GN=clpX PE=3 SV=1
Length = 426
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/373 (56%), Positives = 271/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY L
Sbjct: 282 ATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP + +GV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSI----EGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVNGESAP 410
>sp|A0KYL8|CLPX_SHESA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain ANA-3) GN=clpX PE=3 SV=1
Length = 426
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/373 (56%), Positives = 271/373 (72%), Gaps = 26/373 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY L
Sbjct: 282 ATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKTGSDGVDAV 617
F M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP + +GV
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSI----EGVVKA 397
Query: 618 VVDEESVGSVDAP 630
VVDE V AP
Sbjct: 398 VVDESVVNGESAP 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 266,989,400
Number of Sequences: 539616
Number of extensions: 13230477
Number of successful extensions: 188656
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2870
Number of HSP's successfully gapped in prelim test: 1537
Number of HSP's that attempted gapping in prelim test: 103837
Number of HSP's gapped (non-prelim): 35286
length of query: 678
length of database: 191,569,459
effective HSP length: 124
effective length of query: 554
effective length of database: 124,657,075
effective search space: 69060019550
effective search space used: 69060019550
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)