BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005765
(678 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q922D4|PP6R3_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Mus
musculus GN=Ppp6r3 PE=1 SV=1
Length = 844
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 58/411 (14%)
Query: 10 LVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANA 69
++ IG ++IM++L+RL+ E + + W+ + +++ +V+ S + H+NA
Sbjct: 153 IIKHIGTSAIMDLLLRLLTCIEPPQPR-QDVLNWLNEERIIQRLVEIVHPSQEEDRHSNA 211
Query: 70 AETLCSITR------------SAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSI 117
+++LC I R + P L A + I +L + + +S +V+++ I
Sbjct: 212 SQSLCEIVRLSRDQMLQVQNSTEPDPLLATLEKQEIIEQLLSNIFHKEKNESAIVSAIQI 271
Query: 118 CISLLDPKRLTL-GTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLL 176
++LL+ +R T G + ++H S +VN +E + GRLG +LL ++S +
Sbjct: 272 LLTLLETRRPTFEGHIEICPPGMSH-SACSVNKSVLEAIRGRLGSFHELLLEPPKKSVMK 330
Query: 177 TTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHH 236
TT+G L PP+G RL ++ IS LL + + +L+ ++ ILD+FF+Y +NNFLH
Sbjct: 331 TTWGILDPPVGNTRLNVIRLISSLLQTNTSSINGDLMELNSIGVILDMFFKYTWNNFLHT 390
Query: 237 HVENIILSCLEC--KNAP--------------LIEHLLHECNLVGKILEAEKNFTLKDSN 280
VE I L +NA L++HL +C L+ +ILEA D+N
Sbjct: 391 QVEICIALILASPFENAENGTITDQDSTGDNLLLKHLFQKCQLIERILEA------WDTN 444
Query: 281 KPTVPAEGRLPPRIGNIGHLTRISNKLIQ---LGNNNSEIHAYLQE-----NSEWNDWQI 332
+ GR R G +GHLTRI+N ++ G N++ + +++ W +
Sbjct: 445 EKKQAEGGR---RHGYMGHLTRIANCIVHSTDKGPNSALVQQLIKDLPDEVRERWETFCT 501
Query: 333 NVL---SKRNTLE---NIYQWACGRPTALHDRG----RDSDDDDYQNRDYD 373
N L +KRNT++ + YQ + G + +D DD N +D
Sbjct: 502 NSLGETNKRNTVDLAFSDYQMQQMTSNFIDQFGFNDEKFADQDDIGNVSFD 552
>sp|Q5F471|PP6R3_CHICK Serine/threonine-protein phosphatase 6 regulatory subunit 3
OS=Gallus gallus GN=PPP6R3 PE=2 SV=1
Length = 873
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 200/419 (47%), Gaps = 64/419 (15%)
Query: 10 LVDL----IGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEV 65
VDL IG ++IM++L+RL+ E E + W+ + +++ +V+ S +
Sbjct: 149 FVDLVIKHIGTSAIMDLLLRLLTCIEPPQPR-QEVLNWLNEERIIQRLVEIVHPSQDEDR 207
Query: 66 HANAAETLCSITR------------SAPPALAAKISSPNFIGRLFRHALENSRPKSVLVN 113
H+NA+++LC I R S P L A + I +L + + +S +V+
Sbjct: 208 HSNASQSLCEIIRLSRDQMLQVQNSSEPDPLLASLEKREIIEQLLSNIFHKEKNESAIVS 267
Query: 114 SLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEES 173
++ I ++LL+ +R T + ST +VN +E + RL +LL ++S
Sbjct: 268 AIQILLTLLETRRQTFEGHIEICPPGMSNSTYSVNKSVLEAIKARLSSFHELLLEPPKKS 327
Query: 174 SLLTTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNF 233
+ TT+G L PP+G RL ++ IS LL + + +ELI ++ ILD+FF+Y +NNF
Sbjct: 328 VMKTTWGVLDPPVGNTRLNVIRLISSLLQTNTSSVNQELIELNSIGVILDMFFKYTWNNF 387
Query: 234 LHHHVEN----IILSCLECK------------NAPLIEHLLHECNLVGKILEAEKNFTLK 277
LH VE I+ S LE + L++HL +C L+ +ILEA
Sbjct: 388 LHTQVEICIALILASPLESTENGTITDQDSTGDNLLLKHLFLKCQLIERILEA------W 441
Query: 278 DSNKPTVPAEGRLPPRIGNIGHLTRISNKLIQ---LGNNNSEIHAYLQENSE-----WND 329
+ N+ GR R G +GHLTRI+N ++ G N++ + ++E E W
Sbjct: 442 EMNEKKQAEGGR---RHGYMGHLTRIANCIVHSTDKGPNSTLVQQLIKELPEEVRERWET 498
Query: 330 WQINVL---SKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAF 385
+ + L +KRNT++ + T H D+ D++ + + ++L QAF
Sbjct: 499 FCTSSLGETNKRNTVDLV--------TTCHIHSSSDDEIDFKETGF---SQDSSLQQAF 546
>sp|Q5H9R7|PP6R3_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Homo
sapiens GN=PPP6R3 PE=1 SV=2
Length = 873
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 201/416 (48%), Gaps = 62/416 (14%)
Query: 10 LVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANA 69
++ IG ++IM++L+RL+ E + + W+ + +++ +V+ S + H+NA
Sbjct: 153 IIKHIGTSAIMDLLLRLLTCIEPPQPR-QDVLNWLNEEKIIQRLVEIVHPSQEEDRHSNA 211
Query: 70 AETLCSITR------------SAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSI 117
+++LC I R + P L A + I +L + + +S +V+++ I
Sbjct: 212 SQSLCEIVRLSRDQMLQIQNSTEPDPLLATLEKQEIIEQLLSNIFHKEKNESAIVSAIQI 271
Query: 118 CISLLDPKRLTL-GTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLL 176
++LL+ +R T G + ++H S +VN +E + GRLG +LL ++S +
Sbjct: 272 LLTLLETRRPTFEGHIEICPPGMSH-SACSVNKSVLEAIRGRLGSFHELLLEPPKKSVMK 330
Query: 177 TTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHH 236
TT+G L PP+G RL ++ IS LL + + +L+ ++ IL++FF+Y +NNFLH
Sbjct: 331 TTWGVLDPPVGNTRLNVIRLISSLLQTNTSSINGDLMELNSIGVILNMFFKYTWNNFLHT 390
Query: 237 HVENIILSCL-----ECKNAP-----------LIEHLLHECNLVGKILEAEKNFTLKDSN 280
VE I L +NA L++HL +C L+ +ILEA + N
Sbjct: 391 QVEICIALILASPFENTENATITDQDSTGDNLLLKHLFQKCQLIERILEA------WEMN 444
Query: 281 KPTVPAEGRLPPRIGNIGHLTRISNKLIQ---LGNNNSEIHAYLQE-----NSEWNDWQI 332
+ GR R G +GHLTRI+N ++ G N++ + +++ W +
Sbjct: 445 EKKQAEGGR---RHGYMGHLTRIANCIVHSTDKGPNSALVQQLIKDLPDEVRERWETFCT 501
Query: 333 NVL---SKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAF 385
+ L +KRNT++ + T H D+ D++ + + ++L QAF
Sbjct: 502 SSLGETNKRNTVDLV--------TTCHIHSSSDDEIDFKETGF---SQDSSLQQAF 546
>sp|Q9UPN7|PP6R1_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Homo
sapiens GN=PPP6R1 PE=1 SV=5
Length = 881
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 194/423 (45%), Gaps = 69/423 (16%)
Query: 10 LVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANA 69
L+ IG ++IM++L+RL+ E + + W+ + +++ ++++ S H+NA
Sbjct: 153 LLQHIGTSAIMDLLLRLLTCVERPQLR-QDVVNWLNEEKIVQRLIEQIHPSKDENQHSNA 211
Query: 70 AETLCSITRSA------------PPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSI 117
+++LC I R + P L A + I +L + E + +SV+V+ + +
Sbjct: 212 SQSLCDIIRLSREQMIQVQDSPEPDQLLATLEKQETIEQLLSNMFEGEQSQSVIVSGIQV 271
Query: 118 CISLLDPKR-----LTLGTYY--------MFNRQLTHGSTVTVNPETVEGMLGRLGDLLK 164
++LL+P+R +T+ +++ + + + +V + + RL +
Sbjct: 272 LLTLLEPRRPRSESVTVNSFFSSVDGQLELLAQGALESTVSSVG--ALHALRPRLSCFHQ 329
Query: 165 LLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDL 224
LL + L T+G L PPLG RL +V+ ++ L+ A EL+ +LDL
Sbjct: 330 LLLEPPKLEPLQMTWGMLAPPLGNTRLHVVKLLASALSANDAALTHELLALDVPNTMLDL 389
Query: 225 FFEYPYNNFLHHHVENIILSCLECK-----------NAPLIEHLLHECNLVGKILEAEKN 273
FF Y +NNFLH VE + + L P+++HLL +C LV +IL
Sbjct: 390 FFHYVFNNFLHAQVEGCVSTMLSLGPPPDSSPETPIQNPVVKHLLQQCRLVERIL----- 444
Query: 274 FTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKLIQ---LGNNNSEIHAYLQE--NSEWN 328
T + N A G PR G +GHLTR++ L+Q G N ++ L+E + +
Sbjct: 445 -TSWEENDRVQCAGG---PRKGYMGHLTRVAGALVQNTEKGPNAEQLRQLLKELPSEQQE 500
Query: 329 DWQINV------LSKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLS 382
W+ V +K+N ++ + H SDD+D + ++++ A L
Sbjct: 501 QWEAFVSGPLAETNKKNMVDLVNT---------HHLHSSSDDEDDRLKEFNFPEEA-VLQ 550
Query: 383 QAF 385
QAF
Sbjct: 551 QAF 553
>sp|O75170|PP6R2_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Homo
sapiens GN=PPP6R2 PE=1 SV=2
Length = 966
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 61/354 (17%)
Query: 5 EIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPE 64
+ ++ ++ IG +++M++L+RL+ E + + W+ + V++ +V+ S +
Sbjct: 148 KFISLVLKHIGTSALMDLLLRLVSCVEPAGLR-QDVLHWLNEEKVIQRLVELIHPSQDED 206
Query: 65 VHANAAETLCSITRSA------------PPALAAKISSPNFIGRLFRHALENSRPKSVLV 112
+NA++TLC I R P L + S + + +L ++ + R +S LV
Sbjct: 207 RQSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESQDCVEQLLKNMFDGDRTESCLV 266
Query: 113 NSLSICISLLDPKRL-TLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSE 171
+ + ++LL+ +R+ T G F++ L + V+ + G+ RL D +LL +
Sbjct: 267 SGTQVLLTLLETRRVGTEGLVDSFSQGLER--SYAVSSSVLHGIEPRLKDFHQLLLNPPK 324
Query: 172 ESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYN 231
+ ++LTT G L+ PLG RL ++ LL + + +EL R + +LDLFF+Y +N
Sbjct: 325 KKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSINQELCRLNTMDLLLDLFFKYTWN 384
Query: 232 NFLHHHVENIILSCL--------------ECKNAP----------------------LIE 255
NFLH VE I + L E + P ++
Sbjct: 385 NFLHFQVELCIAAILSHAAREERTEASGSESRVEPPHENGNRSLETPQPAASLPDNTMVT 444
Query: 256 HLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKLIQ 309
HL +C LV +ILEA ++N T A G R GN+GHLTRI+N ++Q
Sbjct: 445 HLFQKCCLVQRILEA------WEANDHTQAAGGM---RRGNMGHLTRIANAVVQ 489
>sp|Q6NRF1|P6R3B_XENLA Serine/threonine-protein phosphatase 6 regulatory subunit 3-B
OS=Xenopus laevis GN=ppp6r3-b PE=2 SV=1
Length = 850
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 176/372 (47%), Gaps = 49/372 (13%)
Query: 10 LVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANA 69
++ IG ++IM++L+RL+ E + + W+ + +++ +VD S + H+NA
Sbjct: 153 IIKHIGTSAIMDLLLRLLTCIEPPQLR-QDVLNWLNEEKIIQRLVDIVHPSQDEDRHSNA 211
Query: 70 AETLCSITR------------SAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSI 117
+++LC I R S P L A + + + +L + + +S +V+++ I
Sbjct: 212 SQSLCEIIRLSRDQMLQVQNSSEPDPLLATLENKEILEQLLSNIFLKEKNESAIVSAIQI 271
Query: 118 CISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLT 177
++LL+ +R + + S +VN + + RL +LL + + T
Sbjct: 272 LLTLLETRRPAFEGHIDLCPPGVNHSVFSVNKNVLAAIQERLPSFHQLLLDPPKTGVMKT 331
Query: 178 TYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHH 237
T+G L PP+G RL ++ I+ LL + +ELI + ILD+FF+Y +NNFLH
Sbjct: 332 TWGILDPPVGNTRLNVIRLIASLLQTNTHTINEELIELNTMGVILDMFFKYSWNNFLHTQ 391
Query: 238 VENIILSCL----------------ECKNAPLIEHLLHECNLVGKILEAEKNFTLKDSNK 281
VE I L + L++HL +C+L+ +ILEA + + + +
Sbjct: 392 VEICIALILASPGDSPEHSTISEENSAGDHVLLKHLFLKCHLIDRILEA---WAMNEKRQ 448
Query: 282 PTVPAEGRLPPRIGNIGHLTRISNKL---IQLGNNNSEIHAYLQE-----NSEWNDWQIN 333
+EG R G +GHLTRI N + I+ G N+ H +++ W + +
Sbjct: 449 ----SEG--GQRYGYMGHLTRIVNCIVHSIEKGPNSVLAHQLVKDLPTDAQERWETFCTS 502
Query: 334 VLS---KRNTLE 342
LS KRNT++
Sbjct: 503 SLSETNKRNTVD 514
>sp|Q8R3Q2|PP6R2_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Mus
musculus GN=Ppp6r2 PE=1 SV=1
Length = 923
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 63/357 (17%)
Query: 4 QEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSP 63
++ +++L+ IG +++M++L+RL+ E + E + W+ + +++ +V
Sbjct: 147 EKFISQLLKHIGTSALMDLLLRLVSCVEPVGLR-QEVLHWLNEEKIIQRLVALIHPHQDE 205
Query: 64 EVHANAAETLCSITRSA------------PPALAAKISSPNFIGRLFRHALENSRPKSVL 111
+ +NA++ LC I R P L + S + + +L ++ + + +S L
Sbjct: 206 DRQSNASQALCDIIRLGRDQGSQLQETVEPDPLLITLESQDCVEQLLKNMFDGDQTESCL 265
Query: 112 VNSLSICISLLDPKRL-TLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSS 170
V+ + + ++LL+P+R+ T G F++ L +V+ + + G+ L + +LL
Sbjct: 266 VSGMQVLLALLEPRRVGTEGLVDSFSQGLERSHSVSSS--ILRGIEPWLKNFHQLLLNPP 323
Query: 171 EESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPY 230
++ ++LTT G L+ PLG RL ++ LL + +EL R + +LDLFF+Y +
Sbjct: 324 KKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPGINQELCRLNTMDLLLDLFFKYTW 383
Query: 231 NNFLHHHVENIILSCL--------------ECKNAPL----------------------- 253
NNFLH VE I + L + K PL
Sbjct: 384 NNFLHLQVELCIAAILSHAAREEQAEASGSDGKVEPLQGSGDGNGKLETTPSITSPPENT 443
Query: 254 -IEHLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKLIQ 309
+ HL +C LV +ILEA ++N T A G R GN+GHLTRI+N ++Q
Sbjct: 444 MVTHLFQKCCLVQRILEA------WEANDHTQAAGGM---RRGNMGHLTRIANAVVQ 491
>sp|Q6NRI0|P6R3A_XENLA Serine/threonine-protein phosphatase 6 regulatory subunit 3-A
OS=Xenopus laevis GN=ppp6r3-a PE=2 SV=1
Length = 852
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 182/372 (48%), Gaps = 49/372 (13%)
Query: 10 LVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANA 69
++ IG ++IM++L+RL+ E + + W+ + +++ +V+ S + H+NA
Sbjct: 153 IIKHIGTSAIMDLLLRLLTCIEPPQLR-QDVLNWLNEEKIIQRLVEIVHPSQDEDRHSNA 211
Query: 70 AETLCSITR------------SAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSI 117
+++LC I R S P L A + + +L + + +S +V+++ I
Sbjct: 212 SQSLCEIIRLSRDQMLQVQNSSEPDPLLATLEKKEILEQLLSNIFLKEKNESAIVSAIQI 271
Query: 118 CISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLT 177
++LL+ +R + + S +VN + + RL +LL + + T
Sbjct: 272 LLTLLETRRPAFEGHIDLCPPGVNYSAFSVNKNVLAAIQERLPSFHQLLLDPPKTGVMKT 331
Query: 178 TYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHH 237
T+G L PP+G RL ++ I+ LL + + +ELI + ILD+FF+Y +NNFLH
Sbjct: 332 TWGILDPPVGNTRLNVIRLIASLLQTNTHSINEELIELNTMGVILDMFFKYSWNNFLHTQ 391
Query: 238 VE---NIIL---------SCLECKNAP----LIEHLLHECNLVGKILEAEKNFTLKDSNK 281
VE +IL S + +N+ L++HL +C+L+ +ILEA + + + +
Sbjct: 392 VEICLALILASPGDSPEHSTISEQNSTGDHVLLKHLFLKCHLIDRILEA---WAMNEKRQ 448
Query: 282 PTVPAEGRLPPRIGNIGHLTRISNKL---IQLGNNNSEIHAYLQE-----NSEWNDWQIN 333
+EG R G +GHLTRI+N + I+ G N+ H +++ W + +
Sbjct: 449 ----SEG--GQRYGYMGHLTRIANCIVHSIEKGPNSVLAHQLIKDLPTDAQERWETFCTS 502
Query: 334 VL---SKRNTLE 342
L +KRNT++
Sbjct: 503 SLGETNKRNTVD 514
>sp|Q7TSI3|PP6R1_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Mus
musculus GN=Ppp6r1 PE=1 SV=1
Length = 856
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 196/422 (46%), Gaps = 67/422 (15%)
Query: 10 LVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANA 69
L+ IG ++IM++L+RL+ E + W+ + +++ ++++ S H+NA
Sbjct: 153 LLRHIGTSAIMDLLLRLLTCVERPQLR-QDVFNWLNEEKIVQRLIEQIHPSKDDNQHSNA 211
Query: 70 AETLCSITRSA------------PPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSI 117
+++LC I R + P L A + I +L + E + +SV+V+ + +
Sbjct: 212 SQSLCDIIRLSREQMIQGQDSPEPDQLLATLEKQETIEQLLSNMFEGEQCQSVIVSGIQV 271
Query: 118 CISLLDPKR-----LTLGTYYM-FNRQLTHGSTVTVNPE-----TVEGMLGRLGDLLKLL 166
++LL+P+R +T+ ++ + QL + ++ + + RL +LL
Sbjct: 272 LLTLLEPRRPRSDSVTMNNFFSSVDGQLELLAQGALDDALSSMGALHALRPRLDRFHQLL 331
Query: 167 DVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFF 226
+ L T+G L PPLG RL +V+ ++ L+ + A +EL+ +LDLFF
Sbjct: 332 LEPPKLEPLQMTWGSLAPPLGNTRLHVVKLLASALSANAAALTQELLVLDVPNTLLDLFF 391
Query: 227 EYPYNNFLHHHVENIILSCLECKNA-----------PLIEHLLHECNLVGKILEA-EKNF 274
Y +NNFLH VE + + L P+++HLL C LV +IL + E+N
Sbjct: 392 HYVFNNFLHAQVEVCVSAMLSSGPPPDSSSETPVPNPIVKHLLQHCRLVERILASWEEND 451
Query: 275 TLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKLIQ---LGNNNSEIHAYLQE--NSEWND 329
++ PR G +GHLTR++N ++Q G N ++ L+E +
Sbjct: 452 RVQSGGG----------PRKGYMGHLTRVANAVVQNAEQGPNAEQLGQLLKELPEEQQQR 501
Query: 330 WQINV------LSKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQ 383
W+ V +K+NT++ + H SDD+D + ++++ A L Q
Sbjct: 502 WEAFVSGPLAETNKKNTVDLVNT---------HHLHSSSDDEDDRLKEFNFPEEA-VLQQ 551
Query: 384 AF 385
AF
Sbjct: 552 AF 553
>sp|O74511|EKC1_SCHPO Extragenic suppressor of kinetochore protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ekc1 PE=1 SV=2
Length = 838
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 201 LTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLEC-----KNAPLIE 255
L V + + E I++ + ILD FF+YP+NNFLH+ V +++ L +N L
Sbjct: 509 LPVIGDFLKIEFIQNNVIPTILDHFFDYPWNNFLHNVVYDVVQQVLNAPMDKDQNYALAV 568
Query: 256 HLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKLIQL 310
+ + + KI+ ++ K KP+ R G +GHLT I++++++
Sbjct: 569 DMFKQGKITEKIVYGQE-LNDKKVAKPS-------GFRAGYMGHLTIIADEVVKF 615
Score = 39.7 bits (91), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 20/202 (9%)
Query: 17 TSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 76
++IM++L++ I D W+ +++ ++ S P+V A+ + +I
Sbjct: 173 SAIMDLLLKFISMDR--CNTAIGIADWLYSQGLIQSLLRLLSPYVDPDVQFTVADVIKAI 230
Query: 77 TRSA----------PPALAAKISSPNFIGRLFRHALENSRPKSV--LVNSLSICISLLDP 124
+ P +L+ ++ S I L + ++ P S L+N +SI I L+
Sbjct: 231 IAISANSNEPGVIGPNSLSRELVSRQTITTLTDYMTDSKAPHSATSLINGVSIVIELIRK 290
Query: 125 KRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLL----KLLDVSSEESSLL-TTY 179
+ L T +P + ML + + K+L S ES L+ T++
Sbjct: 291 NNSDYDVTPVLQMPLDTHPPTTRDPIYLGTMLRLFAEKIPVFQKILLKPSTESDLMPTSF 350
Query: 180 GKLQPPLGKHRLKIVEFISVLL 201
GK++P LG R +I E + LL
Sbjct: 351 GKIKP-LGFERFRICELYAELL 371
>sp|Q8CQD9|PLS_STAES Accumulation-associated protein OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=SE_0175 PE=4 SV=1
Length = 1469
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 593 SKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESVDGNHPS 644
KP+EP + P +PAE GTP+EP + P +PAE G P+EP + + P+
Sbjct: 1306 GKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGKPAEPGKPAEPGKPAEPGKPA 1357
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 593 SKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESVDGNHPS 644
KP+EP + P +PAE GTP+EP + P +PAE G P+EP + P+
Sbjct: 1342 GKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGKPAEPGKPAEPGTPAEPGKPA 1393
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 582 ELSKSIDENPSSKPSEPSESGSPSEPAESGTPSEPAESGTPSEP---AESGTPSEPSESV 638
E K + ++P P+E G P+EP + P +PAE GTP+EP AE GTP+EP +
Sbjct: 1346 EPGKPAEPGKPAEPGTPAEPGKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGTPAEPGKPA 1405
Query: 639 DGNHPS 644
+ P+
Sbjct: 1406 EPGTPT 1411
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 564 EPSPSSSNTEDANITTTGELSKSIDENPSSKPSEPSESGSPSE---PAESGTPSEPAESG 620
EP + + A T E K + ++P +P+E G+P+E PAE GTP+EP +
Sbjct: 1346 EPGKPAEPGKPAEPGTPAEPGKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGTPAEPGKPA 1405
Query: 621 TPSEPAESGTPSEPSESV 638
P P +SG P +P+ S+
Sbjct: 1406 EPGTPTQSGAPEQPNRSM 1423
>sp|B5VMH6|SA190_YEAS6 SIT4-associating protein SAP190 OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=SAP190 PE=3 SV=1
Length = 1033
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 221 ILDLFFEYPYNNFLHHHVENIILSCLE-----CKNAPLIEHLLHECNLVGKILEAEKNFT 275
ILD+F E+P+NNFLH+ + +I N L++ L + L KI++A+K
Sbjct: 636 ILDMFTEFPWNNFLHNVIFDIAQQIFNGPLKTGYNRFLLKDYLVDAYLTKKIVDADK--A 693
Query: 276 LKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL---------IQLGNNNSEIHAYLQENSE 326
+D K T R G +GHLT ++ ++ ++L N+ + L+E
Sbjct: 694 CQDYEKKT-------GLRYGYMGHLTLVAEEISKFKEYIDEMKLTFCNTAVSDRLEE-PF 745
Query: 327 WNDWQINVLSKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAFR 386
W ++ +L+ N T L D G D + DD R+ D + +
Sbjct: 746 WKEYSETILADTREKYN---------TVLGDFGNDQESDDDVIRNSDSEDIIGDTEGNEN 796
Query: 387 YGIYSNDDV 395
YG ND++
Sbjct: 797 YGNGENDEL 805
>sp|P36123|SA190_YEAST SIT4-associating protein SAP190 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SAP190 PE=1 SV=2
Length = 1033
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 221 ILDLFFEYPYNNFLHHHVENIILSCLE-----CKNAPLIEHLLHECNLVGKILEAEKNFT 275
ILD+F E+P+NNFLH+ + +I N L++ L + L KI++A+K
Sbjct: 636 ILDMFTEFPWNNFLHNVIFDIAQQIFNGPLKTGYNRFLLKDYLVDAYLTKKIVDADK--A 693
Query: 276 LKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL---------IQLGNNNSEIHAYLQENSE 326
+D K T R G +GHLT ++ ++ ++L N+ + L+E
Sbjct: 694 CQDYEKKT-------GLRYGYMGHLTLVAEEISKFKEYIDEMKLTFCNTAVSDRLEE-PF 745
Query: 327 WNDWQINVLSKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAFR 386
W ++ +L+ N T L D G D + DD R+ D + +
Sbjct: 746 WKEYSETILADTREKYN---------TVLGDFGNDQESDDDVIRNSDSEDIIGDTEGNEN 796
Query: 387 YGIYSNDDV 395
YG ND++
Sbjct: 797 YGNGENDEL 805
>sp|C8ZCJ2|SA190_YEAS8 SIT4-associating protein SAP190 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=SAP190 PE=3 SV=1
Length = 1033
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 221 ILDLFFEYPYNNFLHHHVENIILSCLE-----CKNAPLIEHLLHECNLVGKILEAEKNFT 275
ILD+F E+P+NNFLH+ + +I N L++ L + L KI++A+K
Sbjct: 636 ILDMFTEFPWNNFLHNVIFDIAQQIFNGPLKTGYNRFLLKDYLVDAYLTKKIVDADK--A 693
Query: 276 LKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL---------IQLGNNNSEIHAYLQENSE 326
+D K T R G +GHLT ++ ++ ++L N+ + +E
Sbjct: 694 CQDYEKKT-------GLRHGYMGHLTLVAEEISKFKEYIDEMKLTFCNTAVSDRFEE-PF 745
Query: 327 WNDWQINVLSKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAFR 386
W ++ +L+ N T L D G D + DD R+ D + +
Sbjct: 746 WKEYSETILADTREKYN---------TVLGDFGNDQESDDDVIRNSDSEDIIGDTEGNEN 796
Query: 387 YGIYSNDDV 395
YG ND++
Sbjct: 797 YGNGENDEL 805
>sp|Q6H236|PEG3_BOVIN Paternally-expressed gene 3 protein OS=Bos taurus GN=PEG3 PE=2 SV=1
Length = 2387
Score = 40.4 bits (93), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 538 SSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSK-SIDENPS--SK 594
S A+EP E Q + EP+ +S E A T E ++ S E P+ S
Sbjct: 1446 SYAEEPAQTSYAEEPAQTSYAE----EPAQTSYTQEPAQTNYTEEPAEASYTEEPAQTSY 1501
Query: 595 PSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESVDGNHPSSDPAATEVVK 654
EP+++ P EPA++ EPA++ EPA++ P EP+++ P+ A E +
Sbjct: 1502 AEEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTSYAKEPAQ 1561
Query: 655 T 655
T
Sbjct: 1562 T 1562
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 564 EPSPSSSNTEDANITTTGELSK-SIDENPS--SKPSEPSESGSPSEPAESGTPSEPAESG 620
EP+ +S E A + E ++ S E P+ S P EP+++ EPA++ EPA++
Sbjct: 1504 EPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTSYAKEPAQTS 1563
Query: 621 TPSEPAESGTPSEPSESVDGNHPSSDPAATEVVKT 655
P EPA++ EP+++ P+ A E +T
Sbjct: 1564 YPEEPAQTSYAEEPAQTSYAEEPAQTSYAEEPAQT 1598
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 564 EPSPSSSNTEDANITTTGELSK-SIDENPS--SKPSEPSESGSPSEPAESGTPSEPAESG 620
EP+ +S E A + E ++ S E P+ S EP+++ P EPA++ EPA++
Sbjct: 1495 EPAQTSYAEEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTS 1554
Query: 621 TPSEPAESGTPSEPSESVDGNHPSSDPAATEVVKT 655
EPA++ P EP+++ P+ A E +T
Sbjct: 1555 YAKEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQT 1589
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 564 EPSPSSSNTEDANITTT---GELSKSIDENPSSKPSEPSESGSPSEPAESGTPSEPAESG 620
EPS +S E A + T E S + + +S EP+++ EPA++ EPA++
Sbjct: 1108 EPSQTSCIEEPAQTSYTDPAAETSYTEEPAQTSYTQEPAQTSCTEEPAQTSCTEEPAQTS 1167
Query: 621 TPSEPAESGTPSEPSESVDGNHPSS-----DPAATEVVKTVAKAEGTPE 664
EPA++ EP+E+ P+ +PA T K AKA T E
Sbjct: 1168 YTQEPAQTSYTKEPAEASYTEEPAQTSCIEEPAQTNYTKESAKASYTEE 1216
Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 564 EPSPSSSNTEDANITTTGELSK-SIDENPS--SKPSEPSESGSPSEPAESGTPSEPAESG 620
EP+ +S E A + T E ++ S E P+ S EP+++ EPA++ EPA++
Sbjct: 1288 EPAQTSYTQEPAQTSCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSYTQEPAQTS 1347
Query: 621 TPSEPAESGTPSEPSESVDGNHP-----SSDPAATEVVKTVAKAEGTPE 664
EPA++ EP+++ P + +PA T + A+ T E
Sbjct: 1348 CTEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSCTEEPAQTSYTEE 1396
>sp|Q01443|SSP2_PLAYO Sporozoite surface protein 2 OS=Plasmodium yoelii yoelii GN=SSP2
PE=1 SV=2
Length = 827
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 590 NPSSKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPS---ESVDGNHPSS 645
N S P+EPS PS P E P+EP+ PS P + P+EPS E ++ N PS+
Sbjct: 480 NAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSNPKKPSNPNEPSNPNEPLNPNEPSN 538
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 593 SKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESVDGNHPS 644
S P+EPS +PS P E P+EP+ PS P E P+EPS ++P+
Sbjct: 471 SNPNEPSNPNAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSNPKKPSNPN 522
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 594 KPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEP 634
KPS P+E +P+EP PS P E P+EP+ PS P
Sbjct: 517 KPSNPNEPSNPNEPLNPNEPSNPNEPSNPNEPSNPEEPSNP 557
Score = 33.1 bits (74), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 565 PSPSSSNTEDANITTTGELSKSIDENPSSKPSEPSESGSPSEPAESGTPSEPA---ESGT 621
P+ S+ E +N ++ + N S P+EPS PS P E P+EP E
Sbjct: 479 PNAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSNPKKPSNPNEPSNPNEPLNPNEPSN 538
Query: 622 PSEPAESGTPSEPSE 636
P+EP+ PS P E
Sbjct: 539 PNEPSNPNEPSNPEE 553
>sp|P23253|TCNA_TRYCR Sialidase OS=Trypanosoma cruzi GN=TCNA PE=2 SV=1
Length = 1162
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 581 GELSKSIDENPSSKPSEPSESG---SPSEPAES---GTPSEPAES---GTPSEPAES--- 628
G S D + S PS P +S +PS PA+S GTPS PA+S TPS PA+S
Sbjct: 1042 GTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTPSTPADSSAH 1101
Query: 629 GTPSEPSESVDGNHPSSDPAATEVVKTV 656
GTPS P++S + PS+ PA + TV
Sbjct: 1102 GTPSTPADSSAHSTPST-PAGSSANGTV 1128
Score = 37.4 bits (85), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 20/97 (20%)
Query: 584 SKSIDENPSSKPSEPSES---GSPSEPAES---GTPSEPAES---GTPSEPAES---GTP 631
S +D + S PS P++S G+PS PA+S TPS P +S TPS PA+S GTP
Sbjct: 1021 STPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTP 1080
Query: 632 SEPSESVDGNHPSSDPAATEVVKTVAKAEGTPEVTKD 668
S P++S + PS+ PA + A GTP D
Sbjct: 1081 STPADSSAHSTPST-PADSS-------AHGTPSTPAD 1109
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 584 SKSIDENPSSKPSEPSES---GSPSEPAES---GTPSEPAES---GTPSEPAESGTPSEP 634
S +D + PS P++S G+PS P +S GTPS PA+S TPS PA+S S P
Sbjct: 685 STPVDSSAHGAPSTPADSSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTP 744
Query: 635 SESVDGNHPSSDPAATEVVKTVAKAEGTPEVTKD 668
S D S +T + A GTP D
Sbjct: 745 STPAD-----SSAHSTPSTPVDSSAHGTPSTPAD 773
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 584 SKSIDENPSSKPSEPSESG---SPSEPAES---GTPSEPAES---GTPSEPAESGTPSEP 634
S D + S PS P++S +PS P +S TPS PA+S GTPS PA+S S P
Sbjct: 997 STPADSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTP 1056
Query: 635 SESVDGNHPSSDPAATEVVKTVAKAEGTPEVTKD 668
S VD S +T + A GTP D
Sbjct: 1057 STPVD-----SSAHSTPSTPADSSAHGTPSTPAD 1085
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 581 GELSKSIDENPSSKPSEPSES---GSPSEPAES---GTPSEPAES---GTPSEPAESGTP 631
G S D + S PS P++S G+PS P +S TPS P +S GTPS P +S
Sbjct: 766 GTPSTPADSSAHSTPSTPADSSAHGTPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAH 825
Query: 632 SEPSESVD 639
S PS VD
Sbjct: 826 STPSTPVD 833
Score = 33.1 bits (74), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 593 SKPSEPSESGSPSEPAES---GTPSEPAES---GTPSEPAESGTPSEPSESVD 639
S P + S G+PS PA+S TPS PA+S TPS PA+S S PS VD
Sbjct: 925 STPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTPSTPADSSAHSTPSTPVD 977
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 584 SKSIDENPSSKPSEPSESG---SPSEPAES---GTPSEPAES---GTPSEPAES---GTP 631
S +D + PS P +S +PS PA+S TPS PA+S GTPS P +S TP
Sbjct: 829 STPVDSSAHGTPSTPVDSSAHSTPSTPADSSAHSTPSTPADSSAHGTPSTPVDSSAHSTP 888
Query: 632 SEPSESVDGNHPSS--DPAATEVVKTVA--KAEGTPEVTKD 668
S P++S + PS+ D +A T A A GTP D
Sbjct: 889 STPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPVD 929
>sp|P21979|SPAA_STRDO Cell surface antigen I/II OS=Streptococcus downei GN=spaA PE=3 SV=2
Length = 1528
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 468 GVTNGGGHDQVTVGEDDLDDTATSAAVPVSKSEDSDVGKLPN---------DSVETGSCT 518
V G ++ +T+G + + A +P +D+ GK PN +V T
Sbjct: 785 AVRMSGPNNYITLGATSATNVLSLAEMPQVPGKDNTAGKKPNIWYSLNGKIRAVNVPKVT 844
Query: 519 TEKPPTWVEWRERPDSSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANIT 578
EKP VE P+ DEP EL D + PEP+P S N + +
Sbjct: 845 KEKPTPPVE---------PTKPDEPTYEVEKELVDLPVEPKYE-PEPTPPSKNPDQSIPE 894
Query: 579 TTGELSKSIDENPSSKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESV 638
E + +++ P EPS P+ P + EP + P EP+ P+ P E V
Sbjct: 895 KPVEPTYEVEKELEPAPVEPSYEKEPTPPQSTPDQEEPEK---PVEPSYQSLPTPPVEPV 951
>sp|Q06852|SLAP1_CLOTH Cell surface glycoprotein 1 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=olpB PE=4 SV=2
Length = 2313
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 534 SSNPSSADEPVS-------IPNGELQDQGGNGDVDVP--EPSPSSSNTEDANITTTGELS 584
S P+ +DEP IP D+ D P EP+PS T T + E +
Sbjct: 1587 SDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPT 1646
Query: 585 KSIDENPSSKPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVD 639
S + PS P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E +
Sbjct: 1647 PSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIP 1705
Query: 640 GNHPSSDPAATE 651
+ PS +P ++
Sbjct: 1706 TDTPSDEPTPSD 1717
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 534 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 593
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1403 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1459
Query: 594 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 648
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1460 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1518
Query: 649 ATE 651
++
Sbjct: 1519 PSD 1521
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 534 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 593
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1446 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1502
Query: 594 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 648
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1503 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1561
Query: 649 ATE 651
++
Sbjct: 1562 PSD 1564
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 534 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 593
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1642 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1698
Query: 594 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 648
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1699 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1757
Query: 649 ATE 651
++
Sbjct: 1758 PSD 1760
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 534 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 593
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1685 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1741
Query: 594 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 648
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1742 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1800
Query: 649 ATE 651
++
Sbjct: 1801 PSD 1803
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 534 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 593
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1728 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1784
Query: 594 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 648
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1785 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1843
Query: 649 ATE 651
++
Sbjct: 1844 PSD 1846
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 534 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 593
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1771 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1827
Query: 594 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 648
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1828 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1886
Query: 649 ATE 651
++
Sbjct: 1887 PSD 1889
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 534 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 593
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1814 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1870
Query: 594 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 648
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1871 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1929
Query: 649 ATE 651
++
Sbjct: 1930 PSD 1932
Score = 33.5 bits (75), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 564 EPSPSSSNTEDANITTTGELSKSIDENPSSKPSEPSESGSPSE---PAESGTPS-EPAES 619
EP+PS T T + E + S + PS P EP + +PS+ P++ TPS EP S
Sbjct: 1387 EPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPS 1446
Query: 620 GTPSEPAESGTPSE-PSESVDGNHPSSDPAATE 651
P+ P++ TPSE P E + + PS +P ++
Sbjct: 1447 DEPT-PSDEPTPSETPEEPIPTDTPSDEPTPSD 1478
>sp|Q5R1T0|CAF1A_CHICK Chromatin assembly factor 1 subunit A OS=Gallus gallus GN=CHAF1A
PE=1 SV=1
Length = 937
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 393 DDVDEAQGSLERDDEDVYFDDESAEVVISSLRLGDDQESGSLFTNSNWFAFEDDRVSHER 452
D VDE+ L D + V FD +++ +++ LG D S NS + DD + +
Sbjct: 112 DSVDESNQRLSDDVDHVSFDSKASSAALTNGMLGKDMNKLSCL-NSTQNSQTDDSMQTDV 170
Query: 453 AAGSLASPSPNIEE-----TGVTNGGGHDQVTVGEDDLDDTATSAAVPVSKSEDSDVGKL 507
++A+ ++ + +G+T + V + +L D +PV ED K
Sbjct: 171 PCEAIANKGEDLVDGIQSCSGLTERNNLENTKVNQSELKDVIFEGKMPVVLLEDIMAAKS 230
Query: 508 PNDSVETGSCTTE 520
P + GS T+E
Sbjct: 231 PQVTSLDGSVTSE 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 274,175,383
Number of Sequences: 539616
Number of extensions: 13073504
Number of successful extensions: 78333
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 1711
Number of HSP's that attempted gapping in prelim test: 51657
Number of HSP's gapped (non-prelim): 18523
length of query: 678
length of database: 191,569,459
effective HSP length: 124
effective length of query: 554
effective length of database: 124,657,075
effective search space: 69060019550
effective search space used: 69060019550
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)