Query 005765
Match_columns 678
No_of_seqs 186 out of 323
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 06:52:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hxt_A De novo protein OR329; 95.3 1.1 3.8E-05 42.4 18.1 183 40-270 36-220 (252)
2 4hxt_A De novo protein OR329; 93.9 1 3.5E-05 42.6 14.0 142 41-226 79-222 (252)
3 4b8j_A Importin subunit alpha- 93.8 1.9 6.4E-05 46.5 17.6 185 41-269 279-474 (528)
4 1wa5_B Importin alpha subunit; 92.9 1.3 4.5E-05 47.9 14.7 161 41-246 292-456 (530)
5 4b8j_A Importin subunit alpha- 92.6 1.3 4.4E-05 47.8 14.0 166 40-248 320-497 (528)
6 2jdq_A Importin alpha-1 subuni 92.4 3 0.0001 43.1 16.1 160 42-246 228-389 (450)
7 1xqr_A HSPBP1 protein; armadil 92.3 4.8 0.00016 41.4 17.2 160 44-248 77-239 (296)
8 3tpo_A Importin subunit alpha- 92.2 3.1 0.0001 45.5 16.5 182 41-269 286-475 (529)
9 4db6_A Armadillo repeat protei 92.1 7 0.00024 36.2 16.8 143 40-226 46-190 (210)
10 4db8_A Armadillo-repeat protei 92.1 1.8 6.3E-05 41.3 13.0 142 42-227 90-233 (252)
11 3ul1_B Importin subunit alpha- 90.9 3.6 0.00012 44.8 15.2 183 41-270 267-457 (510)
12 4db8_A Armadillo-repeat protei 90.8 11 0.00039 35.7 17.4 182 41-270 47-230 (252)
13 3tpo_A Importin subunit alpha- 87.6 26 0.00088 38.1 19.0 68 7-80 78-151 (529)
14 2jdq_A Importin alpha-1 subuni 87.5 28 0.00096 35.8 18.7 177 46-270 147-326 (450)
15 1wa5_B Importin alpha subunit; 85.6 20 0.00067 38.7 16.6 179 46-271 255-437 (530)
16 3ul1_B Importin subunit alpha- 85.6 5.3 0.00018 43.5 12.1 52 23-80 81-132 (510)
17 2z6h_A Catenin beta-1, beta-ca 81.4 15 0.00052 40.8 13.9 181 45-270 179-360 (644)
18 3grl_A General vesicular trans 81.2 27 0.00093 40.2 15.9 210 16-269 79-318 (651)
19 1jdh_A Beta-catenin; beta-cate 78.5 17 0.00057 38.4 12.5 182 44-270 181-363 (529)
20 3grl_A General vesicular trans 78.2 27 0.00092 40.3 14.6 99 151-269 157-261 (651)
21 1xqr_A HSPBP1 protein; armadil 77.8 40 0.0014 34.6 14.6 42 40-81 116-157 (296)
22 2z6g_A B-catenin; FULL-length, 75.2 65 0.0022 37.1 17.1 189 45-268 485-682 (780)
23 1jdh_A Beta-catenin; beta-cate 71.2 1.1E+02 0.0036 32.2 18.6 181 42-270 221-405 (529)
24 2z6g_A B-catenin; FULL-length, 69.3 54 0.0019 37.8 14.6 181 45-270 315-496 (780)
25 3now_A UNC-45 protein, SD10334 67.0 1.7E+02 0.0059 34.4 18.2 182 42-270 489-673 (810)
26 3l6x_A Catenin delta-1; cateni 63.8 75 0.0026 36.0 14.0 154 40-227 300-456 (584)
27 4db6_A Armadillo repeat protei 62.8 92 0.0031 28.4 16.9 174 49-270 13-188 (210)
28 4fdd_A Transportin-1; heat rep 59.5 47 0.0016 38.0 11.6 39 40-79 621-659 (852)
29 3nmw_A APC variant protein; AR 59.0 1.4E+02 0.0047 31.3 14.2 147 42-226 164-315 (354)
30 2z6h_A Catenin beta-1, beta-ca 57.4 2.3E+02 0.0078 31.3 19.8 160 44-249 348-529 (644)
31 1upk_A MO25 protein; transfera 56.8 98 0.0033 33.0 12.4 183 39-269 115-308 (341)
32 1wcz_A Glutamyl endopeptidase; 56.6 2.8 9.5E-05 42.3 0.6 15 587-601 213-227 (268)
33 1xm9_A Plakophilin 1; armadill 50.5 1E+02 0.0035 32.8 11.7 152 40-227 275-430 (457)
34 1wa5_C Importin alpha RE-expor 50.3 2.5E+02 0.0085 32.8 15.8 31 48-79 496-526 (960)
35 3nmz_A APC variant protein; pr 47.6 2.2E+02 0.0074 31.0 13.9 185 46-270 241-429 (458)
36 3nmz_A APC variant protein; pr 47.3 1.8E+02 0.0062 31.7 13.2 148 41-226 279-431 (458)
37 3nmw_A APC variant protein; AR 45.5 2.8E+02 0.0097 28.8 17.3 184 46-269 125-312 (354)
38 2fhf_A Pullulanase; multiple d 44.5 8.5 0.00029 46.8 2.2 10 602-611 14-23 (1083)
39 3now_A UNC-45 protein, SD10334 41.5 3.5E+02 0.012 31.9 15.1 198 46-272 47-270 (810)
40 2o8l_A V8 protease, taphylococ 37.3 7.4 0.00025 39.3 0.2 54 585-638 211-264 (274)
41 4fdd_A Transportin-1; heat rep 35.4 1.3E+02 0.0045 34.3 10.2 51 48-101 442-492 (852)
42 3opb_A SWI5-dependent HO expre 30.8 3.4E+02 0.012 31.9 12.6 165 39-253 366-536 (778)
43 2vgl_A Adaptor protein complex 27.6 1.8E+02 0.0061 32.6 9.4 21 190-210 258-278 (621)
44 4gmo_A Putative uncharacterize 26.1 4E+02 0.014 30.1 12.0 189 44-261 31-227 (684)
45 3u0r_A Apoptosis inhibitor 5; 24.6 4E+02 0.014 29.8 11.1 62 16-78 98-163 (507)
46 3nwa_A GB, GB-1, GB1, envelope 23.5 20 0.00069 41.3 0.6 8 630-637 47-54 (703)
No 1
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.31 E-value=1.1 Score=42.37 Aligned_cols=183 Identities=14% Similarity=0.199 Sum_probs=108.0
Q ss_pred HHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhh
Q 005765 40 SMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICI 119 (678)
Q Consensus 40 il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI 119 (678)
....+.+.++|+.|+..|... +.+++.+|+..|..|....+ .....+.....|..|+..+-.. ...+..+++.++-
T Consensus 36 ~~~~~~~~g~i~~L~~ll~~~-~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~i~~l~~ll~~~--~~~v~~~a~~~L~ 111 (252)
T 4hxt_A 36 AIKAIVDAGGVEVLVKLLTST-DSEVQKEAARALANIASGPD-EAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALA 111 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHHHHTTCS--SHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhCC-CHHHHHHHHHHHHHHHcCCh-HHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHH
Confidence 456667789999999999875 48889999999999987542 2222333334455554443322 1333344444444
Q ss_pred hccCccCCCCCcchhcccccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHH
Q 005765 120 SLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFI 197 (678)
Q Consensus 120 ~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELI 197 (678)
.|... ++.....+.. .++.+.++|..+. -..|...+..+
T Consensus 112 ~l~~~-----------------------~~~~~~~~~~~~~i~~L~~~l~~~~----------------~~~~~~a~~~L 152 (252)
T 4hxt_A 112 NIASG-----------------------PDEAIKAIVDAGGVEVLVKLLTSTD----------------SEVQKEAARAL 152 (252)
T ss_dssp HHTTS-----------------------CHHHHHHHHHTTHHHHHHHHTTCSC----------------HHHHHHHHHHH
T ss_pred HHHcC-----------------------CHHHHHHHHHCCCHHHHHHHHcCCC----------------HHHHHHHHHHH
Confidence 44320 1222222222 3556666666322 24678888888
Q ss_pred HHHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCChHHHHHHhhhccHHHHHHHh
Q 005765 198 SVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 198 a~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n~~Li~hLF~dc~Li~rILea 270 (678)
..|... +......+++.|+++.++.++-.- +.-+...+..++..+.. .+..... .+.+..++..+++.
T Consensus 153 ~~l~~~-~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~-~~~~~~~-~l~~~~~i~~L~~l 220 (252)
T 4hxt_A 153 ANIASG-PDEAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALANIAS-GPTSAIK-AIVDAGGVEVLQKL 220 (252)
T ss_dssp HHHTTS-CHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTT-SBHHHHH-HHHHTTHHHHHHHG
T ss_pred HHHHcC-CHHHHHHHHHCcCHHHHHHHHCCC--CHHHHHHHHHHHHHHHc-CCHHHHH-HHHHCCCHHHHHHH
Confidence 888765 455667889999999999998742 33444444455555443 2333333 34456677777765
No 2
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=93.89 E-value=1 Score=42.60 Aligned_cols=142 Identities=18% Similarity=0.266 Sum_probs=87.7
Q ss_pred HHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhh
Q 005765 41 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICIS 120 (678)
Q Consensus 41 l~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~ 120 (678)
...+.+.+.++.|+..|.. .+.++..+|+..|+.|....+ .....+.....|..|+..+-... ..+...++.++-.
T Consensus 79 ~~~~~~~~~i~~l~~ll~~-~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~i~~L~~~l~~~~--~~~~~~a~~~L~~ 154 (252)
T 4hxt_A 79 IKAIVDAGGVEVLVKLLTS-TDSEVQKEAARALANIASGPD-EAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALAN 154 (252)
T ss_dssp HHHHHHTTHHHHHHHHTTC-SSHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCH-HHHHHHHHCCCHHHHHHHHcCCC--HHHHHHHHHHHHH
Confidence 4445566899999999985 568999999999999987543 22223333345555555443322 2344444444444
Q ss_pred ccCccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHH
Q 005765 121 LLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFIS 198 (678)
Q Consensus 121 LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa 198 (678)
|... .+.....+. .-++.|.++|..+. ...|...+..+.
T Consensus 155 l~~~-----------------------~~~~~~~~~~~~~i~~L~~ll~~~~----------------~~v~~~a~~~L~ 195 (252)
T 4hxt_A 155 IASG-----------------------PDEAIKAIVDAGGVEVLVKLLTSTD----------------SEVQKEAARALA 195 (252)
T ss_dssp HTTS-----------------------CHHHHHHHHHTTHHHHHHHHTTCSC----------------HHHHHHHHHHHH
T ss_pred HHcC-----------------------CHHHHHHHHHCcCHHHHHHHHCCCC----------------HHHHHHHHHHHH
Confidence 4331 111111121 23455566665322 257888889988
Q ss_pred HHHhcCcHHHHHHHHHhccHHHHHHHHh
Q 005765 199 VLLTVGSEAAEKELIRHGAVRRILDLFF 226 (678)
Q Consensus 199 ~LL~t~n~~i~~eLi~~~i~~~lLdLFF 226 (678)
.|.. ++....+.+++.|+++.++.+.-
T Consensus 196 ~l~~-~~~~~~~~l~~~~~i~~L~~ll~ 222 (252)
T 4hxt_A 196 NIAS-GPTSAIKAIVDAGGVEVLQKLLT 222 (252)
T ss_dssp HHTT-SBHHHHHHHHHTTHHHHHHHGGG
T ss_pred HHHc-CCHHHHHHHHHCCCHHHHHHHHC
Confidence 8886 46677888999999998888774
No 3
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=93.81 E-value=1.9 Score=46.50 Aligned_cols=185 Identities=18% Similarity=0.192 Sum_probs=110.4
Q ss_pred HHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhh
Q 005765 41 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICIS 120 (678)
Q Consensus 41 l~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~ 120 (678)
.+.+.+.++++.|+.+|... +..+..+|+.+|..|.... ......+.....+..|+..+-... ...+...++.++-.
T Consensus 279 ~~~~~~~g~v~~Lv~lL~~~-~~~v~~~a~~~L~nl~~~~-~~~~~~~~~~~~l~~L~~lL~~~~-~~~v~~~A~~~L~n 355 (528)
T 4b8j_A 279 IQAVIEAGVCPRLVELLLHP-SPSVLIPALRTVGNIVTGD-DAQTQCIIDHQALPCLLSLLTQNL-KKSIKKEACWTISN 355 (528)
T ss_dssp HHHHHHTTCHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSC-HHHHHHHHTTTHHHHHHHHHHSCC-CHHHHHHHHHHHHH
T ss_pred HHHHHHcCHHHHHHHHHcCC-ChhHHHHHHHHHHHHHcCC-HHHHHHHHHhhhHHHHHHHHcCCC-cHHHHHHHHHHHHH
Confidence 34555667899999999765 5788889999999988754 333333444455665555544331 12333344444444
Q ss_pred ccCccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHH
Q 005765 121 LLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFIS 198 (678)
Q Consensus 121 LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa 198 (678)
|... ++..+..+. .-++.|.++|.... -..|..++..|.
T Consensus 356 l~~~-----------------------~~~~~~~~~~~~~i~~L~~lL~~~~----------------~~v~~~a~~aL~ 396 (528)
T 4b8j_A 356 ITAG-----------------------NKDQIQAVINAGIIGPLVNLLQTAE----------------FDIKKEAAWAIS 396 (528)
T ss_dssp HHTS-----------------------CHHHHHHHHHTTCHHHHHHHHHHSC----------------HHHHHHHHHHHH
T ss_pred HHCC-----------------------CHHHHHHHHHCCCHHHHHHHHhcCC----------------HHHHHHHHHHHH
Confidence 4320 122222222 23555666665331 147888999999
Q ss_pred HHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCC---------hHHHHHHhhhccHHHHHHH
Q 005765 199 VLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKN---------APLIEHLLHECNLVGKILE 269 (678)
Q Consensus 199 ~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n---------~~Li~hLF~dc~Li~rILe 269 (678)
.|...++......|++.|++..+++|+-.. +.-+...+..++..++.... ..-...+|.++..+++|..
T Consensus 397 nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~--d~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~ 474 (528)
T 4b8j_A 397 NATSGGSHDQIKYLVSEGCIKPLCDLLICP--DIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIEN 474 (528)
T ss_dssp HHHHHSCHHHHHHHHHTTCHHHHHHGGGCS--CHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHH
Confidence 999887788888999999999999998652 33444455555555553211 1113445556666665554
No 4
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=92.94 E-value=1.3 Score=47.91 Aligned_cols=161 Identities=16% Similarity=0.165 Sum_probs=89.8
Q ss_pred HHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhh
Q 005765 41 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICIS 120 (678)
Q Consensus 41 l~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~ 120 (678)
++.+.+.++++.|+.+|.. .+..+..+|+.+|..|....+ .....+.....+..|+..+-.. ...+...++.++-.
T Consensus 292 ~~~~~~~~~v~~Lv~lL~~-~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~l~~L~~lL~~~--~~~vr~~A~~aL~~ 367 (530)
T 1wa5_B 292 IQAVIDVRIPKRLVELLSH-ESTLVQTPALRAVGNIVTGND-LQTQVVINAGVLPALRLLLSSP--KENIKKEACWTISN 367 (530)
T ss_dssp HHHHHHTTCHHHHHHGGGC-SCHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHCC-CChhhHHHHHHHHHHHHcCCH-HHHHHHHHcchHHHHHHHHcCC--CHHHHHHHHHHHHH
Confidence 4445556889999999974 467888899999998876542 2222222223333333333221 11122222222222
Q ss_pred ccCccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHH
Q 005765 121 LLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFIS 198 (678)
Q Consensus 121 LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa 198 (678)
|.. ..+..+..+. .-++.|..+|..+. -..|...+..|.
T Consensus 368 l~~-----------------------~~~~~~~~~~~~~~l~~L~~lL~~~~----------------~~v~~~a~~aL~ 408 (530)
T 1wa5_B 368 ITA-----------------------GNTEQIQAVIDANLIPPLVKLLEVAE----------------YKTKKEACWAIS 408 (530)
T ss_dssp HTT-----------------------SCHHHHHHHHHTTCHHHHHHHHHHSC----------------HHHHHHHHHHHH
T ss_pred HHc-----------------------CCHHHHHHHHHCCCHHHHHHHHhcCC----------------HHHHHHHHHHHH
Confidence 221 0122222222 23555566665322 146788899999
Q ss_pred HHHhcCcH--HHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHh
Q 005765 199 VLLTVGSE--AAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCL 246 (678)
Q Consensus 199 ~LL~t~n~--~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~IL 246 (678)
.|...+.. .....|++.|+++.+++++-.- +.-+...+..++..++
T Consensus 409 ~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~--~~~v~~~al~aL~~l~ 456 (530)
T 1wa5_B 409 NASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA--DNRIIEVTLDALENIL 456 (530)
T ss_dssp HHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTC--CHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCC--CHHHHHHHHHHHHHHH
Confidence 99887665 6677888999999999987643 3334444444444444
No 5
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=92.59 E-value=1.3 Score=47.77 Aligned_cols=166 Identities=15% Similarity=0.139 Sum_probs=98.6
Q ss_pred HHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhh
Q 005765 40 SMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICI 119 (678)
Q Consensus 40 il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI 119 (678)
..+.+-+.++++.|+.+|....+..++..|+.+|+.|....+ .....+.....|..|+..+-.+. ..+...++.++-
T Consensus 320 ~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~-~~~~~~~~~~~i~~L~~lL~~~~--~~v~~~a~~aL~ 396 (528)
T 4b8j_A 320 QTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNK-DQIQAVINAGIIGPLVNLLQTAE--FDIKKEAAWAIS 396 (528)
T ss_dssp HHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCH-HHHHHHHHTTCHHHHHHHHHHSC--HHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCH-HHHHHHHHCCCHHHHHHHHhcCC--HHHHHHHHHHHH
Confidence 345556678999999999877688999999999999987532 22223322344444554443321 222233333333
Q ss_pred hccCccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHH
Q 005765 120 SLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFI 197 (678)
Q Consensus 120 ~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELI 197 (678)
.|... + .+.....+. .-++.|+.+|..+. -..|..++..+
T Consensus 397 nl~~~-----------------~-----~~~~~~~l~~~~~i~~L~~lL~~~d----------------~~v~~~al~~L 438 (528)
T 4b8j_A 397 NATSG-----------------G-----SHDQIKYLVSEGCIKPLCDLLICPD----------------IRIVTVCLEGL 438 (528)
T ss_dssp HHHHH-----------------S-----CHHHHHHHHHTTCHHHHHHGGGCSC----------------HHHHHHHHHHH
T ss_pred HHHcC-----------------C-----CHHHHHHHHHCCCHHHHHHHHcCCC----------------HHHHHHHHHHH
Confidence 33320 0 122333332 24666777776432 14677788888
Q ss_pred HHHHhcCcH----------HHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcC
Q 005765 198 SVLLTVGSE----------AAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLEC 248 (678)
Q Consensus 198 a~LL~t~n~----------~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes 248 (678)
..|+..+.. .....+.+.|.+..|..| .+--|.-++.....|+..++..
T Consensus 439 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L--~~~~~~~v~~~a~~il~~~~~~ 497 (528)
T 4b8j_A 439 ENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENL--QSHDNNEIYEKAVKILEAYWMD 497 (528)
T ss_dssp HHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHG--GGCSSHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHH--HcCCCHHHHHHHHHHHHHHCCC
Confidence 888876533 346667778888888776 3334666677777777777653
No 6
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=92.43 E-value=3 Score=43.13 Aligned_cols=160 Identities=15% Similarity=0.129 Sum_probs=89.8
Q ss_pred HHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhc
Q 005765 42 QWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISL 121 (678)
Q Consensus 42 ~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~L 121 (678)
..+.+.++++.|+..|. +.+.++..+|+..|..|....+. ....+.....+..|+..+-.. ...+-..++.++-.|
T Consensus 228 ~~~~~~~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~-~~~~~~~~~~l~~L~~ll~~~--~~~vr~~a~~~L~~l 303 (450)
T 2jdq_A 228 QAVIDAGVCRRLVELLM-HNDYKVVSPALRAVGNIVTGDDI-QTQVILNCSALQSLLHLLSSP--KESIKKEACWTISNI 303 (450)
T ss_dssp HHHHHTTTHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHH-HHHHHHTTTHHHHHHHHTTCS--SHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHC-CCchhHHHHHHHHHHHHhhCChH-HHHHHHHCccHHHHHHHHcCC--CHHHHHHHHHHHHHH
Confidence 34445678999999997 45678889999999998865432 222222223444444433221 112222233333222
Q ss_pred cCccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHH
Q 005765 122 LDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISV 199 (678)
Q Consensus 122 Le~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~ 199 (678)
.. .++.....+. .-++.|.++|..+. -..|...+..+..
T Consensus 304 ~~-----------------------~~~~~~~~~~~~~~l~~L~~~l~~~~----------------~~v~~~a~~~L~~ 344 (450)
T 2jdq_A 304 TA-----------------------GNRAQIQTVIDANIFPALISILQTAE----------------FRTRKEAAWAITN 344 (450)
T ss_dssp TT-----------------------SCHHHHHHHHHTTHHHHHHHHHHHSC----------------HHHHHHHHHHHHH
T ss_pred Hc-----------------------CCHHHHHHHHHCCCHHHHHHHHhcCC----------------HHHHHHHHHHHHH
Confidence 21 0122222222 23444555554221 2578889999999
Q ss_pred HHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHh
Q 005765 200 LLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCL 246 (678)
Q Consensus 200 LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~IL 246 (678)
|...++....+.+++.++++.+++++-.. +.-+...+...+..++
T Consensus 345 l~~~~~~~~~~~l~~~~~i~~L~~ll~~~--~~~v~~~a~~aL~~l~ 389 (450)
T 2jdq_A 345 ATSGGSAEQIKYLVELGCIKPLCDLLTVM--DSKIVQVALNGLENIL 389 (450)
T ss_dssp HHHHCCHHHHHHHHHHTCHHHHHHGGGSS--CHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHCCCHHHHHHHhcCC--CHHHHHHHHHHHHHHH
Confidence 98876666677888999999999987653 2233333344444333
No 7
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=92.27 E-value=4.8 Score=41.44 Aligned_cols=160 Identities=15% Similarity=0.203 Sum_probs=100.4
Q ss_pred hhhhhHHHHHHH-hhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhcc
Q 005765 44 IEDTNVLEMIVD-KFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLL 122 (678)
Q Consensus 44 L~Eq~LIerLId-~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LL 122 (678)
+...+.++.|+. +|.. .+.++...|+..|..|..-.| .....+.....|..|+..+-.+ ....+..+++..|-.|.
T Consensus 77 ~~~~G~l~~Lv~~lL~s-~~~~vr~~Aa~~Lg~ia~~n~-~~~~~vv~~g~l~~Ll~LL~~~-~~~~v~~~A~~ALsnl~ 153 (296)
T 1xqr_A 77 FCQLSGMHLLVGRYLEA-GAAGLRWRAAQLIGTCSQNVA-AIQEQVLGLGALRKLLRLLDRD-ACDTVRVKALFAISCLV 153 (296)
T ss_dssp HHHTTHHHHHHHTTTTC-SSHHHHHHHHHHHHHHHTTCH-HHHHHHHHTTHHHHHHHHHHHC-SCHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcC-CCHHHHHHHHHHHHHHHhCCH-HHHHHHHHCCCHHHHHHHHccC-CCHHHHHHHHHHHHHHH
Confidence 345667889999 7764 577999999999999987643 1222333334555555444322 12345555555555555
Q ss_pred CccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHH
Q 005765 123 DPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVL 200 (678)
Q Consensus 123 e~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~L 200 (678)
+. ++.....+. .-++-|.++|..+.. ..|.+.+-+|+.|
T Consensus 154 ~~-----------------------~~~~~~~~~~~ggi~~L~~lL~~~d~----------------~v~~~A~~aLs~L 194 (296)
T 1xqr_A 154 RE-----------------------QEAGLLQFLRLDGFSVLMRAMQQQVQ----------------KLKVKSAFLLQNL 194 (296)
T ss_dssp TT-----------------------CHHHHHHHHHTTHHHHHHHHHHSSCH----------------HHHHHHHHHHHHH
T ss_pred cC-----------------------CcHHHHHHHHCCCHHHHHHHHcCCCH----------------HHHHHHHHHHHHH
Confidence 41 111111121 234455566653221 4678899999999
Q ss_pred HhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcC
Q 005765 201 LTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLEC 248 (678)
Q Consensus 201 L~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes 248 (678)
... +......+++.|+++.++.|. +.+ +.-++.++..+|..|+..
T Consensus 195 ~~~-~~~~~~~vv~~g~i~~Lv~LL-~~~-d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 195 LVG-HPEHKGTLCSMGMVQQLVALV-RTE-HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHH-CGGGHHHHHHTTHHHHHHHHH-TSC-CSTHHHHHHHHHHHHHTT
T ss_pred HhC-ChHHHHHHHHcCCHHHHHHHH-cCC-ChhHHHHHHHHHHHHHhC
Confidence 877 455678899999999999995 444 566777777777777755
No 8
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=92.23 E-value=3.1 Score=45.47 Aligned_cols=182 Identities=12% Similarity=0.178 Sum_probs=101.5
Q ss_pred HHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhh
Q 005765 41 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICIS 120 (678)
Q Consensus 41 l~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~ 120 (678)
.+.+.+.+++++|+.+|.. .+..++.+|+..|..|+...+ +....+ +. ..++.+++.
T Consensus 286 ~~~v~~~g~i~~Lv~lL~~-~~~~v~~~a~~aL~nl~~~~~----------~~~~~i----~~--------~g~l~~L~~ 342 (529)
T 3tpo_A 286 IEMVVKKGVVPQLVKLLGA-TELPIVTPALRAIGNIVTGTD----------EQTQKV----ID--------AGALAVFPS 342 (529)
T ss_dssp HHHHHTTTCHHHHHHHHTC-SCHHHHHHHHHHHHHHTTSCH----------HHHHHH----HH--------TTGGGGHHH
T ss_pred HHHHHhccchHHHHHHhcC-CChhHHHHHHHHHHHHHccch----------HHHHHH----hh--------cccHHHHHH
Confidence 3444566788999999975 467888899999998876532 111111 11 134555666
Q ss_pred ccCccCCCCCcchhcc--cccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHHH
Q 005765 121 LLDPKRLTLGTYYMFN--RQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEF 196 (678)
Q Consensus 121 LLe~~r~~~s~y~~~~--~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvEL 196 (678)
||....... ....+. ..+. ..++.....+.. -++.|+.+|..... ..|...+..
T Consensus 343 LL~~~~~~i-~~~a~~aL~nl~-----~~~~~~~~~v~~~g~i~~Lv~lL~~~~~----------------~v~~~A~~a 400 (529)
T 3tpo_A 343 LLTNPKTNI-QKEATWTMSNIT-----AGRQDQIQQVVNHGLVPFLVGVLSKADF----------------KTQKAAAWA 400 (529)
T ss_dssp HTTCSSHHH-HHHHHHHHHHHH-----TSCHHHHHHHHHTTHHHHHHHHHHSSCH----------------HHHHHHHHH
T ss_pred HHcCCCHHH-HHHHHHHHHHHh-----cccHHHHHHHHhcCcHHHHHHHhcCCCH----------------HHHHHHHHH
Confidence 665211100 000000 0000 012222222222 24555566653321 367778888
Q ss_pred HHHHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhc----CCChHHHHHHhhhccHHHHHHH
Q 005765 197 ISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLE----CKNAPLIEHLLHECNLVGKILE 269 (678)
Q Consensus 197 Ia~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILe----s~n~~Li~hLF~dc~Li~rILe 269 (678)
|.-|...++..-...|++.|+++.|++|.- .+ +.-+-..+...+..||. .....-+..+|++|..+++|-.
T Consensus 401 L~nl~~~~~~~~~~~l~~~g~i~~L~~LL~-~~-d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~ 475 (529)
T 3tpo_A 401 ITNYTSGGTVEQIVYLVHCGIIEPLMNLLS-AK-DTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEA 475 (529)
T ss_dssp HHHHHHHSCHHHHHHHHHTTCHHHHHHGGG-CS-CHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTG
T ss_pred HHHHHcCCCHHHHHHHHHCcCHHHHHHHhc-CC-CHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHH
Confidence 888888777777788999999999999874 33 33333344444544553 1234445567778877777643
No 9
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=92.12 E-value=7 Score=36.16 Aligned_cols=143 Identities=15% Similarity=0.195 Sum_probs=85.3
Q ss_pred HHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhh
Q 005765 40 SMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICI 119 (678)
Q Consensus 40 il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI 119 (678)
....+.+.+.|+.|+..|... +.+++.+|+..|..|..-.+. ....+.....|..|+..+-... ..+...++.++-
T Consensus 46 ~~~~i~~~g~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~~~-~~~~i~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~ 121 (210)
T 4db6_A 46 QIQAVIDAGALPALVQLLSSP-NEQILQEALWALSNIASGGNE-QIQAVIDAGALPALVQLLSSPN--EQILQEALWALS 121 (210)
T ss_dssp HHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSCHH-HHHHHHHTTCHHHHHHHTTCSC--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHcCC-CHHHHHHHHHHHHHHhcCCcH-HHHHHHHCCCHHHHHHHHcCCc--HHHHHHHHHHHH
Confidence 345666778999999999875 778899999999998865321 1122222233333443332221 222233333333
Q ss_pred hccCccCCCCCcchhcccccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHH
Q 005765 120 SLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFI 197 (678)
Q Consensus 120 ~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELI 197 (678)
.|.. .++.....+.. -++.|.++|..+. -..|...+..+
T Consensus 122 ~l~~-----------------------~~~~~~~~~~~~~~i~~L~~ll~~~~----------------~~v~~~a~~aL 162 (210)
T 4db6_A 122 NIAS-----------------------GGNEQIQAVIDAGALPALVQLLSSPN----------------EQILQEALWAL 162 (210)
T ss_dssp HHTT-----------------------SCHHHHHHHHHTTHHHHHHHHTTCSC----------------HHHHHHHHHHH
T ss_pred HHHc-----------------------CCHHHHHHHHHcCcHHHHHHHHcCCC----------------HHHHHHHHHHH
Confidence 3322 02222222322 3566667776321 14788888989
Q ss_pred HHHHhcCcHHHHHHHHHhccHHHHHHHHh
Q 005765 198 SVLLTVGSEAAEKELIRHGAVRRILDLFF 226 (678)
Q Consensus 198 a~LL~t~n~~i~~eLi~~~i~~~lLdLFF 226 (678)
..|...+ ......+++.|+++.++.+.-
T Consensus 163 ~~l~~~~-~~~~~~~~~~g~i~~L~~ll~ 190 (210)
T 4db6_A 163 SNIASGG-NEQKQAVKEAGALEKLEQLQS 190 (210)
T ss_dssp HHHHTSC-HHHHHHHHHTTHHHHHHHGGG
T ss_pred HHHHcCC-cHHHHHHHHCCCHHHHHHHHh
Confidence 9888754 556788899999999998775
No 10
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=92.09 E-value=1.8 Score=41.33 Aligned_cols=142 Identities=16% Similarity=0.215 Sum_probs=87.0
Q ss_pred HHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhc
Q 005765 42 QWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISL 121 (678)
Q Consensus 42 ~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~L 121 (678)
..+.+.+.|+.|+..|... +.+++.+|+..|..|....+. ....+.....|..|+..+-.. ...+...++.++-.|
T Consensus 90 ~~i~~~g~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~~~-~~~~~~~~~~i~~L~~lL~~~--~~~v~~~a~~~L~~l 165 (252)
T 4db8_A 90 QAVIDAGALPALVQLLSSP-NEQILQEALWALSNIASGGNE-QIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNI 165 (252)
T ss_dssp HHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHTTSCHH-HHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHcCC-CHHHHHHHHHHHHHhhcCCch-HHHHHHHCCCHHHHHHHHhCC--CHHHHHHHHHHHHHH
Confidence 4445567899999999874 678999999999999765422 112333334555555544322 123334444444444
Q ss_pred cCccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHH
Q 005765 122 LDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISV 199 (678)
Q Consensus 122 Le~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~ 199 (678)
... .+.....+. .-++.|.++|..+. ...|...+..+..
T Consensus 166 ~~~-----------------------~~~~~~~~~~~~~i~~L~~ll~~~~----------------~~v~~~a~~~L~~ 206 (252)
T 4db8_A 166 ASG-----------------------GNEQIQAVIDAGALPALVQLLSSPN----------------EQILQEALWALSN 206 (252)
T ss_dssp TTS-----------------------CHHHHHHHHHTTCHHHHHHGGGCSS----------------HHHHHHHHHHHHH
T ss_pred HcC-----------------------ChHHHHHHHHCCCHHHHHHHHCCCC----------------HHHHHHHHHHHHH
Confidence 331 112222222 23566667776432 1467888888888
Q ss_pred HHhcCcHHHHHHHHHhccHHHHHHHHhh
Q 005765 200 LLTVGSEAAEKELIRHGAVRRILDLFFE 227 (678)
Q Consensus 200 LL~t~n~~i~~eLi~~~i~~~lLdLFFk 227 (678)
|.. ++......+++.|+++.++.++..
T Consensus 207 l~~-~~~~~~~~~~~~g~i~~L~~ll~~ 233 (252)
T 4db8_A 207 IAS-GGNEQKQAVKEAGALEKLEQLQSH 233 (252)
T ss_dssp HTT-SCHHHHHHHHHTTHHHHHHTTTTC
T ss_pred Hhc-CCHHHHHHHHHCCcHHHHHHHhCC
Confidence 875 456677788999999999988765
No 11
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=90.91 E-value=3.6 Score=44.85 Aligned_cols=183 Identities=12% Similarity=0.177 Sum_probs=103.5
Q ss_pred HHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhh
Q 005765 41 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICIS 120 (678)
Q Consensus 41 l~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~ 120 (678)
.+.+.+.+++++|+.+|.. .+..++.+|+..|..|...++ +....+ ++. .++.+++.
T Consensus 267 ~~~i~~~g~i~~Lv~lL~~-~~~~v~~~al~aL~nl~~~~~----------~~~~~i----~~~--------g~l~~L~~ 323 (510)
T 3ul1_B 267 IEMVVKKGVVPQLVKLLGA-TELPIVTPALRAIGNIVTGTD----------EQTQKV----IDA--------GALAVFPS 323 (510)
T ss_dssp HHHHHTTTCHHHHHHHHTC-SCHHHHHHHHHHHHHHTTSCH----------HHHHHH----HHT--------TGGGGCC-
T ss_pred HHHHHhcccchhhhhhhcC-CChhhhhHHHHHHHHhhcCCH----------HHHHHH----hhc--------cchHHHHH
Confidence 3445566788999999975 456788899999988876542 211122 121 34556666
Q ss_pred ccCccCCCCCcchhcc--cccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHHH
Q 005765 121 LLDPKRLTLGTYYMFN--RQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEF 196 (678)
Q Consensus 121 LLe~~r~~~s~y~~~~--~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvEL 196 (678)
||....... ....+. .++. ..++.....+.. -++.|..+|..... ..|...+..
T Consensus 324 LL~~~~~~v-~~~A~~aL~nl~-----a~~~~~~~~v~~~g~i~~Lv~lL~~~~~----------------~v~~~Aa~a 381 (510)
T 3ul1_B 324 LLTNPKTNI-QKEATWTMSNIT-----AGRQDQIQQVVNHGLVPFLVGVLSKADF----------------KTQKEAAWA 381 (510)
T ss_dssp CTTCSSHHH-HHHHHHHHHHHT-----TSCHHHHHHHHHTTHHHHHHHHHHSSCH----------------HHHHHHHHH
T ss_pred HhcCCCHHH-HHHHHHHHHHHH-----cCcHHHHHHHHhcCCHHHHHHHHcCCCH----------------HHHHHHHHH
Confidence 665321100 000000 0010 112222232322 24555666653321 367778888
Q ss_pred HHHHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhc----CCChHHHHHHhhhccHHHHHHHh
Q 005765 197 ISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLE----CKNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 197 Ia~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILe----s~n~~Li~hLF~dc~Li~rILea 270 (678)
|.-|...++......|++.|+++.+++|.- .+ +.-+-..+-..+..||. .....-+..+|++|..+++|-+-
T Consensus 382 L~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~-~~-d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~L 457 (510)
T 3ul1_B 382 ITNYTSGGTVEQIVYLVHCGIIEPLMNLLS-AK-DTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL 457 (510)
T ss_dssp HHHHHHHCCHHHHHHHHHTTCHHHHHHGGG-CS-CHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHG
T ss_pred HHHHHccCCHHHHHHHHHCCCHHHHHHHhc-CC-CHHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHH
Confidence 888888888777888999999999999864 33 33333334444444443 23344456678888888876543
No 12
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=90.83 E-value=11 Score=35.72 Aligned_cols=182 Identities=15% Similarity=0.179 Sum_probs=104.3
Q ss_pred HHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhh
Q 005765 41 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICIS 120 (678)
Q Consensus 41 l~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~ 120 (678)
...+.+.++|+.|+.+|.... .+++.+|+..|..|..-.+ .....+.....|..|+..+-.. ...+...++.++-.
T Consensus 47 ~~~~~~~g~i~~L~~lL~~~~-~~v~~~a~~~L~~l~~~~~-~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~ 122 (252)
T 4db8_A 47 IQAVIDAGALPALVQLLSSPN-EQILQEALWALSNIASGGN-EQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSN 122 (252)
T ss_dssp HHHHHHTTHHHHHHHGGGCSC-HHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHcCCC-HHHHHHHHHHHHHHhcCCH-HHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHH
Confidence 344556789999999998764 8899999999999886542 2222222223444444333222 12333344444444
Q ss_pred ccCccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHH
Q 005765 121 LLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFIS 198 (678)
Q Consensus 121 LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa 198 (678)
|... .+.....+. .-++.|.++|..+. -..|...+..+.
T Consensus 123 l~~~-----------------------~~~~~~~~~~~~~i~~L~~lL~~~~----------------~~v~~~a~~~L~ 163 (252)
T 4db8_A 123 IASG-----------------------GNEQIQAVIDAGALPALVQLLSSPN----------------EQILQEALWALS 163 (252)
T ss_dssp HTTS-----------------------CHHHHHHHHHTTHHHHHHHGGGCSC----------------HHHHHHHHHHHH
T ss_pred hhcC-----------------------CchHHHHHHHCCCHHHHHHHHhCCC----------------HHHHHHHHHHHH
Confidence 4220 011111122 13556666775332 146778888888
Q ss_pred HHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCChHHHHHHhhhccHHHHHHHh
Q 005765 199 VLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 199 ~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n~~Li~hLF~dc~Li~rILea 270 (678)
.|...+ ......+++.|+++.++.++-.- +--+...+..++..+.. .+..... .+.++.++..|++.
T Consensus 164 ~l~~~~-~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~-~~~~~~~-~~~~~g~i~~L~~l 230 (252)
T 4db8_A 164 NIASGG-NEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIAS-GGNEQKQ-AVKEAGALEKLEQL 230 (252)
T ss_dssp HHTTSC-HHHHHHHHHTTCHHHHHHGGGCS--SHHHHHHHHHHHHHHTT-SCHHHHH-HHHHTTHHHHHHTT
T ss_pred HHHcCC-hHHHHHHHHCCCHHHHHHHHCCC--CHHHHHHHHHHHHHHhc-CCHHHHH-HHHHCCcHHHHHHH
Confidence 887654 45667788999999999988643 43444444455555542 2333333 34466788877764
No 13
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=87.62 E-value=26 Score=38.09 Aligned_cols=68 Identities=13% Similarity=0.234 Sum_probs=47.9
Q ss_pred HHHHHHhcCcchH------HHHHHHHhccCCCCCcChhhHHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccC
Q 005765 7 MARLVDLIGITSI------MEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSA 80 (678)
Q Consensus 7 Vd~LLKHI~tsaI------mDlLLRLIt~de~~~~~~~~il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~s 80 (678)
+..|++.+...-. +--|.||++.+... + ++-+-+.++|++|+.+|..+..++++..|+..|+.|....
T Consensus 78 l~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~-~-----i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~ 151 (529)
T 3tpo_A 78 VEDIVKGINSNNLESQLQATQAARKLLSREKQP-P-----IDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGT 151 (529)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCC-C-----HHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCc-h-----HHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCC
Confidence 4555555554432 22344566655542 1 4556678999999999998888999999999999998654
No 14
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=87.47 E-value=28 Score=35.75 Aligned_cols=177 Identities=17% Similarity=0.226 Sum_probs=102.5
Q ss_pred hhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccC-ChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccCc
Q 005765 46 DTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSA-PPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDP 124 (678)
Q Consensus 46 Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~s-Pn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe~ 124 (678)
+.++++.|+..|....+.++..+|+..|..|.+.. |..-. .+. ...+..|+..+-.. ...+...++.++-.|.+.
T Consensus 147 ~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~-~~~-~~~l~~L~~~l~~~--~~~v~~~a~~~L~~l~~~ 222 (450)
T 2jdq_A 147 DCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEF-AKV-SPCLNVLSWLLFVS--DTDVLADACWALSYLSDG 222 (450)
T ss_dssp HTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCG-GGT-GGGHHHHHHHTTCC--CHHHHHHHHHHHHHHTSS
T ss_pred HCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCH-HHH-HHHHHHHHHHHccC--CHHHHHHHHHHHHHHHCC
Confidence 45689999999997778899999999999999764 32211 111 44555565554322 133444444444444331
Q ss_pred cCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHh
Q 005765 125 KRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLT 202 (678)
Q Consensus 125 ~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~ 202 (678)
.+.....+. ..++.|.++|..+. -..|...+..+..|..
T Consensus 223 -----------------------~~~~~~~~~~~~~i~~L~~ll~~~~----------------~~v~~~a~~~L~~l~~ 263 (450)
T 2jdq_A 223 -----------------------PNDKIQAVIDAGVCRRLVELLMHND----------------YKVVSPALRAVGNIVT 263 (450)
T ss_dssp -----------------------SHHHHHHHHHTTTHHHHHHHTTCSC----------------HHHHHHHHHHHHHHTT
T ss_pred -----------------------CcHHHHHHHHcCcHHHHHHHHCCCc----------------hhHHHHHHHHHHHHhh
Confidence 011111121 23555666665221 1467778888888776
Q ss_pred cCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCChHHHHHHhhhccHHHHHHHh
Q 005765 203 VGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 203 t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n~~Li~hLF~dc~Li~rILea 270 (678)
.. ....+.+++.|+++.++.+.-. + +.-+......++..+..+ +...+..++ +..++..|++.
T Consensus 264 ~~-~~~~~~~~~~~~l~~L~~ll~~-~-~~~vr~~a~~~L~~l~~~-~~~~~~~~~-~~~~l~~L~~~ 326 (450)
T 2jdq_A 264 GD-DIQTQVILNCSALQSLLHLLSS-P-KESIKKEACWTISNITAG-NRAQIQTVI-DANIFPALISI 326 (450)
T ss_dssp SC-HHHHHHHHTTTHHHHHHHHTTC-S-SHHHHHHHHHHHHHHTTS-CHHHHHHHH-HTTHHHHHHHH
T ss_pred CC-hHHHHHHHHCccHHHHHHHHcC-C-CHHHHHHHHHHHHHHHcC-CHHHHHHHH-HCCCHHHHHHH
Confidence 54 4456677888999999988754 3 334444444555555433 344444443 35677766665
No 15
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=85.61 E-value=20 Score=38.65 Aligned_cols=179 Identities=12% Similarity=0.059 Sum_probs=101.4
Q ss_pred hhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccCcc
Q 005765 46 DTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPK 125 (678)
Q Consensus 46 Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe~~ 125 (678)
..++++.|+.+|... +.++..+|+..|+.|....+. ....+.....+..|+..+-.. ...+...++.++-.|...
T Consensus 255 ~~~~l~~L~~lL~~~-d~~v~~~a~~~L~~L~~~~~~-~~~~~~~~~~v~~Lv~lL~~~--~~~v~~~a~~~L~~l~~~- 329 (530)
T 1wa5_B 255 VSQALPTLAKLIYSM-DTETLVDACWAISYLSDGPQE-AIQAVIDVRIPKRLVELLSHE--STLVQTPALRAVGNIVTG- 329 (530)
T ss_dssp HGGGHHHHHHHTTCC-CHHHHHHHHHHHHHHHSSCHH-HHHHHHHTTCHHHHHHGGGCS--CHHHHHHHHHHHHHHTTS-
T ss_pred HHhHHHHHHHHHcCC-CHHHHHHHHHHHHHHhCCCHH-HHHHHHhcCcHHHHHHHHCCC--ChhhHHHHHHHHHHHHcC-
Confidence 457899999988754 678899999999999876432 222222223444444443321 122333333333333220
Q ss_pred CCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHhc
Q 005765 126 RLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTV 203 (678)
Q Consensus 126 r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~t 203 (678)
++.....+. .-++.|..+|..+. ...|...+..|..|...
T Consensus 330 ----------------------~~~~~~~~~~~~~l~~L~~lL~~~~----------------~~vr~~A~~aL~~l~~~ 371 (530)
T 1wa5_B 330 ----------------------NDLQTQVVINAGVLPALRLLLSSPK----------------ENIKKEACWTISNITAG 371 (530)
T ss_dssp ----------------------CHHHHHHHHHTTHHHHHHHHTTCSC----------------HHHHHHHHHHHHHHTTS
T ss_pred ----------------------CHHHHHHHHHcchHHHHHHHHcCCC----------------HHHHHHHHHHHHHHHcC
Confidence 111111111 23444556665321 25788888888888764
Q ss_pred CcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCCh--HHHHHHhhhccHHHHHHHhh
Q 005765 204 GSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNA--PLIEHLLHECNLVGKILEAE 271 (678)
Q Consensus 204 ~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n~--~Li~hLF~dc~Li~rILea~ 271 (678)
+ ....+.+++.++++.|+.++-. + +.-+...+..++..+...... ....+|+ ++.++..|+..-
T Consensus 372 ~-~~~~~~~~~~~~l~~L~~lL~~-~-~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~-~~~~l~~L~~ll 437 (530)
T 1wa5_B 372 N-TEQIQAVIDANLIPPLVKLLEV-A-EYKTKKEACWAISNASSGGLQRPDIIRYLV-SQGCIKPLCDLL 437 (530)
T ss_dssp C-HHHHHHHHHTTCHHHHHHHHHH-S-CHHHHHHHHHHHHHHHHHTTTCTHHHHHHH-HTTCHHHHHHHT
T ss_pred C-HHHHHHHHHCCCHHHHHHHHhc-C-CHHHHHHHHHHHHHHHhcCCCcHHHHHHHH-HCCCHHHHHHHH
Confidence 3 4555678899999999998854 2 233344444455555544333 5556665 567888888763
No 16
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=85.55 E-value=5.3 Score=43.50 Aligned_cols=52 Identities=13% Similarity=0.231 Sum_probs=40.5
Q ss_pred HHHHhccCCCCCcChhhHHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccC
Q 005765 23 LIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSA 80 (678)
Q Consensus 23 LLRLIt~de~~~~~~~~il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~s 80 (678)
+-||++.+.++ + ++-+-+.++|++||.+|..+..++++.+||-.|+.|..-.
T Consensus 81 ~rklls~e~~p-p-----i~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~ 132 (510)
T 3ul1_B 81 ARKLLSREKQP-P-----IDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGT 132 (510)
T ss_dssp HHHHHTCSSCC-C-----HHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHhcCCCCc-h-----HHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCC
Confidence 45677766552 2 4455678999999999998888999999999999987543
No 17
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=81.42 E-value=15 Score=40.83 Aligned_cols=181 Identities=11% Similarity=0.061 Sum_probs=101.0
Q ss_pred hhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccCc
Q 005765 45 EDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDP 124 (678)
Q Consensus 45 ~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe~ 124 (678)
.+.+.++.|+.+|.....+..+.+++.+|+.+..... ....+.....|..|+..+-.. ...+..+++.++..|-+.
T Consensus 179 ~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~--~~~~l~~~g~l~~L~~ll~~~--~~~~~~~a~~~L~nL~~~ 254 (644)
T 2z6h_A 179 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS--NKPAIVEAGGMQALGLHLTDP--SQRLVQNCLWTLRNLSDA 254 (644)
T ss_dssp HHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTT--HHHHHHHTTHHHHHHTTTTCS--CHHHHHHHHHHHHHHGGG
T ss_pred HHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcCcc--cHHHHHHCCCHHHHHHHHhcC--CHHHHHHHHHHHHHHhhc
Confidence 3457789999999887777888888888888865321 122222233455555444322 233444444444444331
Q ss_pred cCCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHhcC
Q 005765 125 KRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVG 204 (678)
Q Consensus 125 ~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~t~ 204 (678)
. +.. ..+ ...++.|.++|.... ...|...+..+..|...
T Consensus 255 ~-----------------~~~----~~~---~~~i~~Lv~lL~~~d----------------~~v~~~a~~aL~~L~~~- 293 (644)
T 2z6h_A 255 A-----------------TKQ----EGM---EGLLGTLVQLLGSDD----------------INVVTCAAGILSNLTCN- 293 (644)
T ss_dssp C-----------------TTC----CSC---HHHHHHHHHHTTCSC----------------HHHHHHHHHHHHHHHTT-
T ss_pred c-----------------hhh----hhh---hhHHHHHHHHHcCCC----------------HHHHHHHHHHHHHHHcC-
Confidence 0 000 011 133555566665221 24677788888887654
Q ss_pred cHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcC-CChHHHHHHhhhccHHHHHHHh
Q 005765 205 SEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLEC-KNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 205 n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes-~n~~Li~hLF~dc~Li~rILea 270 (678)
+......+++.|.+..|+.+.....-+.-+......++..+... ......+..+.++..+..|++.
T Consensus 294 ~~~~~~~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~l 360 (644)
T 2z6h_A 294 NYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 360 (644)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHT
T ss_pred CHHHHHHHHHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccChHHHHHH
Confidence 45667888899999999999877542222333333334444322 2233344445556667777654
No 18
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=81.22 E-value=27 Score=40.21 Aligned_cols=210 Identities=13% Similarity=0.183 Sum_probs=112.5
Q ss_pred cchHHHHHHHHhccCCCCCc------ChhhHHHHhh-----hhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhH
Q 005765 16 ITSIMEVLIRLIGADEHMYT------NFTESMQWIE-----DTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPAL 84 (678)
Q Consensus 16 tsaImDlLLRLIt~de~~~~------~~~~il~WL~-----Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~L 84 (678)
++++.|.|+-|+..++.... ...++-.|+. +++-|.-|+++|. +.+..+--++-++|..|.+..|...
T Consensus 79 v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~-~~df~vR~~alqlL~~L~~~r~~~~ 157 (651)
T 3grl_A 79 IGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLE-EFDFHVRWPGVKLLTSLLKQLGPQV 157 (651)
T ss_dssp HHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTT-CCCHHHHHHHHHHHHHHHHHSHHHH
T ss_pred HHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhc-CccHHHHHHHHHHHHHHHhcCcHHH
Confidence 45678888888877654211 0123345554 4678999999996 4678888899999999998765433
Q ss_pred Hhhc-CCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccCccCCCCCcchhcccccccCCcccCChhhHH--HHHHhHHH
Q 005765 85 AAKI-SSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVE--GMLGRLGD 161 (678)
Q Consensus 85 l~~L-~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~--ail~~L~d 161 (678)
-..+ ..|.-|.+|++.+-.. .+-.-..++.++.+|-+. ++.+-+ ++..-+..
T Consensus 158 Q~~Il~~p~gi~~Lv~lL~d~--rE~iRneallLL~~Lt~~-----------------------n~~iQklVAFEnaFe~ 212 (651)
T 3grl_A 158 QQIILVSPMGVSRLMDLLADS--REVIRNDGVLLLQALTRS-----------------------NGAIQKIVAFENAFER 212 (651)
T ss_dssp HHHHHHSTTHHHHHHGGGGCS--SHHHHHHHHHHHHHHHTT-----------------------CHHHHHHHHHTTHHHH
T ss_pred HHHHHhCcccHHHHHHHHhCc--hHHHHHHHHHHHHHHhcC-----------------------CHHHHHHHHHhccHHH
Confidence 3222 2444555554433221 122222233444444331 111111 11123444
Q ss_pred HHHhhcCCCcccccccccccccCCccchhH--HHHHHHHHHHhcCcHHHHHHHHHhccHHHHHHHHh----hcCCCchhH
Q 005765 162 LLKLLDVSSEESSLLTTYGKLQPPLGKHRL--KIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFF----EYPYNNFLH 235 (678)
Q Consensus 162 f~~LL~~~~~~~~l~TT~G~l~pPLG~~RL--KIvELIa~LL~t~n~~i~~eLi~~~i~~~lLdLFF----kYpwNNfLH 235 (678)
+.+++...- ++....+ .-+.++..||+.| ..-++.+.+.+.++.+..||- .+.|+ .
T Consensus 213 Lf~Ii~~Eg--------------~~~Ggivv~DCL~ll~nLLr~N-~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~---~ 274 (651)
T 3grl_A 213 LLDIITEEG--------------NSDGGIVVEDCLILLQNLLKNN-NSNQNFFKEGSYIQRMKPWFEVGDENSGWS---A 274 (651)
T ss_dssp HHHHHHHHT--------------GGGSHHHHHHHHHHHHHHHTTC-HHHHHHHHHTTCGGGGGGGGCCCSCSSCCC---H
T ss_pred HHHHHHhcC--------------CCccchhHHHHHHHHHHHHhcC-HHHHHHHHHcCCHHHHHHHhCCCccccccH---H
Confidence 455554221 1111122 4567788888885 444677888899999988864 36787 3
Q ss_pred HHHHH------HHHHHhcCCC----hHHHHHHhhhccHHHHHHH
Q 005765 236 HHVEN------IILSCLECKN----APLIEHLLHECNLVGKILE 269 (678)
Q Consensus 236 ~~Ve~------iI~~ILes~n----~~Li~hLF~dc~Li~rILe 269 (678)
+.+-+ ||+..+.+.+ ..--+..|.+|.++..++.
T Consensus 275 Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ 318 (651)
T 3grl_A 275 QKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCT 318 (651)
T ss_dssp HHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHH
Confidence 44444 3333333322 3344556666777776555
No 19
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=78.46 E-value=17 Score=38.44 Aligned_cols=182 Identities=12% Similarity=0.071 Sum_probs=99.5
Q ss_pred hhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccC
Q 005765 44 IEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLD 123 (678)
Q Consensus 44 L~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe 123 (678)
+.+.+.++.|+..|.......+...++.+|..+.... . ....+.....|..|+..+-.. ...+..+++.++..|-+
T Consensus 181 i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~-~-~~~~~~~~g~~~~L~~ll~~~--~~~~~~~a~~~L~~l~~ 256 (529)
T 1jdh_A 181 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCS-S-NKPAIVEAGGMQALGLHLTDP--SQRLVQNCLWTLRNLSD 256 (529)
T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTST-T-HHHHHHHTTHHHHHHTTTTSS--CHHHHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcCc-c-cHHHHHHCCCHHHHHHHHhCC--ChHHHHHHHHHHHHHhc
Confidence 3445678888888887777778878888887776432 1 122222233444444433222 12333344444444433
Q ss_pred ccCCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHhc
Q 005765 124 PKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTV 203 (678)
Q Consensus 124 ~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~t 203 (678)
.. +. ...+ ...++.|.++|.... ...|...+..+..|...
T Consensus 257 ~~-----------------~~----~~~~---~~~i~~L~~ll~~~~----------------~~v~~~a~~~L~~L~~~ 296 (529)
T 1jdh_A 257 AA-----------------TK----QEGM---EGLLGTLVQLLGSDD----------------INVVTCAAGILSNLTCN 296 (529)
T ss_dssp TC-----------------TT----CSCC---HHHHHHHHHHTTCSC----------------HHHHHHHHHHHHHHTTT
T ss_pred CC-----------------hh----hHHH---HhHHHHHHHHHcCCC----------------HHHHHHHHHHHHHHhcC
Confidence 10 00 0011 133455556664221 24677788888888553
Q ss_pred CcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcC-CChHHHHHHhhhccHHHHHHHh
Q 005765 204 GSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLEC-KNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 204 ~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes-~n~~Li~hLF~dc~Li~rILea 270 (678)
+......+++.|.++.++.++-...-+.-+......++..+... ....-.+..+.++..+..|+..
T Consensus 297 -~~~~~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~l 363 (529)
T 1jdh_A 297 -NYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 363 (529)
T ss_dssp -CHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHT
T ss_pred -CHHHHHHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHH
Confidence 45677888999999999999987554434444444445544432 2223233344455666666654
No 20
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=78.24 E-value=27 Score=40.26 Aligned_cols=99 Identities=21% Similarity=0.193 Sum_probs=64.0
Q ss_pred hHHHHHH---hHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHhcCcHHHHHHHHHhccHHHHHHHHhh
Q 005765 151 TVEGMLG---RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFE 227 (678)
Q Consensus 151 ~L~ail~---~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~t~n~~i~~eLi~~~i~~~lLdLFFk 227 (678)
+-++|+. -++.|+.+|..+.. ..|-..+-|+..|...+ ..+++.++-.|+|..+++++-.
T Consensus 157 ~Q~~Il~~p~gi~~Lv~lL~d~rE----------------~iRneallLL~~Lt~~n-~~iQklVAFEnaFe~Lf~Ii~~ 219 (651)
T 3grl_A 157 VQQIILVSPMGVSRLMDLLADSRE----------------VIRNDGVLLLQALTRSN-GAIQKIVAFENAFERLLDIITE 219 (651)
T ss_dssp HHHHHHHSTTHHHHHHGGGGCSSH----------------HHHHHHHHHHHHHHTTC-HHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHhCchH----------------HHHHHHHHHHHHHhcCC-HHHHHHHHHhccHHHHHHHHHh
Confidence 3444552 46667777764432 36777888888888764 5666666666999999999987
Q ss_pred cCCCchhH--HHHHHHHHHHhc-CCChHHHHHHhhhccHHHHHHH
Q 005765 228 YPYNNFLH--HHVENIILSCLE-CKNAPLIEHLLHECNLVGKILE 269 (678)
Q Consensus 228 YpwNNfLH--~~Ve~iI~~ILe-s~n~~Li~hLF~dc~Li~rILe 269 (678)
=.. ++ .+|.+|+.-+.+ -+.+..-+.+|.+...+.++..
T Consensus 220 Eg~---~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~ 261 (651)
T 3grl_A 220 EGN---SDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKP 261 (651)
T ss_dssp HTG---GGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGG
T ss_pred cCC---CccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHH
Confidence 543 32 455666554333 1234445777888887777653
No 21
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=77.79 E-value=40 Score=34.55 Aligned_cols=42 Identities=10% Similarity=0.126 Sum_probs=34.5
Q ss_pred HHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCC
Q 005765 40 SMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAP 81 (678)
Q Consensus 40 il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sP 81 (678)
..+++-+.+.|+.|+.+|....+..+..+|+..|+.|+|-.+
T Consensus 116 ~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~ 157 (296)
T 1xqr_A 116 IQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQE 157 (296)
T ss_dssp HHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCc
Confidence 345566678999999999876678999999999999998653
No 22
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=75.21 E-value=65 Score=37.13 Aligned_cols=189 Identities=10% Similarity=0.080 Sum_probs=93.5
Q ss_pred hhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCC-----Cccchhhhhhhhh
Q 005765 45 EDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSR-----PKSVLVNSLSICI 119 (678)
Q Consensus 45 ~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~-----~~S~LVngIsVlI 119 (678)
.+.+.++.|+.+|.......+...|+..|+.|.+...+ ...+.....|..|+..+-.+.. ...++.+ .
T Consensus 485 ~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~~~~~--~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~n-----q 557 (780)
T 2z6g_A 485 RLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPAN--HAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ-----Q 557 (780)
T ss_dssp HHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHHSSHHH--HHHHHHTTHHHHHHHHHHHHHHHHHHTTC-----------
T ss_pred HHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHhcCHHH--HHHHHHCCCHHHHHHHHHhcchhHHHHHhhcccc-----c
Confidence 34567999999999887779999999999999864221 1222223344444443322110 0000000 0
Q ss_pred hccCccCCCCCcch--hcccccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHH
Q 005765 120 SLLDPKRLTLGTYY--MFNRQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVE 195 (678)
Q Consensus 120 ~LLe~~r~~~s~y~--~~~~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvE 195 (678)
.+.... ...+.. .+... .. ...++.....|.. .++.|+++|... --..|...+.
T Consensus 558 ~~~~~~--~~~~v~~~a~~aL---~~-La~~~~~~~~l~~~~~i~~Lv~lL~~~----------------~~~v~~~a~~ 615 (780)
T 2z6g_A 558 QFVEGV--RMEEIVEACTGAL---HI-LARDIHNRIVIRGLNTIPLFVQLLYSP----------------IENIQRVAAG 615 (780)
T ss_dssp CCSTTC--CHHHHHHHHHHHH---HH-HTTSHHHHHHHHHTCCHHHHHHGGGCS----------------CHHHHHHHHH
T ss_pred hhhccc--ChHHHHHHHHHHH---HH-HhcChhhHHHHHHCCcHHHHHHHHcCC----------------CHHHHHHHHH
Confidence 000000 000000 00000 00 0001112122222 355666666532 2256777777
Q ss_pred HHHHHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCChHHHHHHhhhccHHHHHH
Q 005765 196 FISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNAPLIEHLLHECNLVGKIL 268 (678)
Q Consensus 196 LIa~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n~~Li~hLF~dc~Li~rIL 268 (678)
.+..|. .+......|.+.|.+..|+.|.-. =|.-+......++..+...+...+...| ..+|+.+++
T Consensus 616 aL~~L~--~~~~~~~~i~~~g~i~~L~~Ll~~--~~~~Vr~~A~~aL~~l~~~~~~~~~~~l--~~~ll~~l~ 682 (780)
T 2z6g_A 616 VLCELA--QDKEAAEAIEAEGATAPLTELLHS--RNEGVATYAAAVLFRMSEDKPQDYKKRL--SVELTSSLF 682 (780)
T ss_dssp HHHHHH--TSHHHHHHHHHTTCHHHHHHGGGC--SCHHHHHHHHHHHHHHHTTSCTTHHHHH--HHHHHHHC-
T ss_pred HHHHHh--cCHHHHHHHHHCCCHHHHHHHHcC--CCHHHHHHHHHHHHHHHcCChHhhhccc--cHHHHHHHH
Confidence 777775 346678889999999999998542 2445555555566666654433333322 344444444
No 23
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=71.23 E-value=1.1e+02 Score=32.23 Aligned_cols=181 Identities=13% Similarity=0.109 Sum_probs=102.4
Q ss_pred HHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhc
Q 005765 42 QWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISL 121 (678)
Q Consensus 42 ~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~L 121 (678)
..+.+.+.++.|+.+|... +.++..+|+.+|..+.+..+.. ......+..|+..+-.. ...+...++.++-.|
T Consensus 221 ~~~~~~g~~~~L~~ll~~~-~~~~~~~a~~~L~~l~~~~~~~----~~~~~~i~~L~~ll~~~--~~~v~~~a~~~L~~L 293 (529)
T 1jdh_A 221 PAIVEAGGMQALGLHLTDP-SQRLVQNCLWTLRNLSDAATKQ----EGMEGLLGTLVQLLGSD--DINVVTCAAGILSNL 293 (529)
T ss_dssp HHHHHTTHHHHHHTTTTSS-CHHHHHHHHHHHHHHHTTCTTC----SCCHHHHHHHHHHTTCS--CHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhCC-ChHHHHHHHHHHHHHhcCChhh----HHHHhHHHHHHHHHcCC--CHHHHHHHHHHHHHH
Confidence 4555678999999999765 6788889999999998765431 12235565565544222 233444455555444
Q ss_pred cCccCCCCCcchhcccccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHH
Q 005765 122 LDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISV 199 (678)
Q Consensus 122 Le~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~ 199 (678)
-.. ++.....+.. -++.+.++|...... -..|...+..+..
T Consensus 294 ~~~-----------------------~~~~~~~~~~~~~v~~L~~ll~~~~~~--------------~~v~~~a~~~L~n 336 (529)
T 1jdh_A 294 TCN-----------------------NYKNKMMVCQVGGIEALVRTVLRAGDR--------------EDITEPAICALRH 336 (529)
T ss_dssp TTT-----------------------CHHHHHHHHHTTHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHH
T ss_pred hcC-----------------------CHHHHHHHHHcCChHHHHHHHHccCCH--------------HHHHHHHHHHHHH
Confidence 331 1111222221 244555555432210 1467778888888
Q ss_pred HHhcC--cHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCChHHHHHHhhhccHHHHHHHh
Q 005765 200 LLTVG--SEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 200 LL~t~--n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n~~Li~hLF~dc~Li~rILea 270 (678)
|...+ +......+++.|.++.++.+.-. +.+.-+...+..++..+..+... . ..|.+.+++..+++.
T Consensus 337 l~~~~~~~~~~~~~i~~~~~i~~L~~lL~~-~~~~~v~~~a~~~l~nl~~~~~~--~-~~~~~~~~i~~L~~l 405 (529)
T 1jdh_A 337 LTSRHQEAEMAQNAVRLHYGLPVVVKLLHP-PSHWPLIKATVGLIRNLALCPAN--H-APLREQGAIPRLVQL 405 (529)
T ss_dssp HTSSSTTHHHHHHHHHHTTCHHHHHHTTST-TCCHHHHHHHHHHHHHHTTSGGG--H-HHHHHTTHHHHHHHH
T ss_pred HHcCCchHHHHHHHHHHcCChhHHHHHhcc-ccchHHHHHHHHHHHHHhcChhh--h-HHHHHcCCHHHHHHH
Confidence 86542 23467788999999999987653 33323333344445544433221 2 344466777776664
No 24
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=69.26 E-value=54 Score=37.78 Aligned_cols=181 Identities=12% Similarity=0.068 Sum_probs=99.2
Q ss_pred hhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccCc
Q 005765 45 EDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDP 124 (678)
Q Consensus 45 ~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe~ 124 (678)
.+.+.++.|+.+|.......++.+++.+|+.|..... ....+.....|..|+..+-.. ......+++.+|..|.+.
T Consensus 315 ~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~--~~~~i~~~g~l~~Ll~lL~~~--~~~~~~~a~~~L~~L~~~ 390 (780)
T 2z6g_A 315 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS--NKPAIVEAGGMQALGLHLTDP--SQRLVQNCLWTLRNLSDA 390 (780)
T ss_dssp HTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTT--HHHHHHHTTHHHHHGGGTTCS--CHHHHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcChH--HHHHHHHhchHHHHHHHHcCC--chHHHHHHHHHHHHHhcc
Confidence 4457789999999887777888888888888875431 112222223444444443322 123444445555555431
Q ss_pred cCCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHhcC
Q 005765 125 KRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVG 204 (678)
Q Consensus 125 ~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~t~ 204 (678)
... . .... ..++.|.++|.... ...|...+..+..|...
T Consensus 391 ~~~-----------------~----~~~~---~~i~~Lv~lL~~~d----------------~~vr~~A~~aL~~L~~~- 429 (780)
T 2z6g_A 391 ATK-----------------Q----EGME---GLLGTLVQLLGSDD----------------INVVTCAAGILSNLTCN- 429 (780)
T ss_dssp CTT-----------------C----SCCH---HHHHHHHHHTTCSC----------------HHHHHHHHHHHHHHTSS-
T ss_pred chh-----------------h----hhhh---hHHHHHHHHHcCCC----------------HHHHHHHHHHHHHHHhC-
Confidence 100 0 0111 23444455554221 24677788888887554
Q ss_pred cHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcC-CChHHHHHHhhhccHHHHHHHh
Q 005765 205 SEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLEC-KNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 205 n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes-~n~~Li~hLF~dc~Li~rILea 270 (678)
+......+++.|.+..|+.+.....-..-.......++..+... ......+..+..+..+..|++.
T Consensus 430 ~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~L~~l 496 (780)
T 2z6g_A 430 NYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKL 496 (780)
T ss_dssp CHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHHHHHT
T ss_pred CHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHHHHHHH
Confidence 45567788899999999999886432212222233333333322 2223334444556667777764
No 25
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=66.96 E-value=1.7e+02 Score=34.41 Aligned_cols=182 Identities=15% Similarity=0.180 Sum_probs=106.7
Q ss_pred HHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhc
Q 005765 42 QWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISL 121 (678)
Q Consensus 42 ~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~L 121 (678)
+.+-+.+.|+.|+.+|.. .+++++.+|+..|..|..- .+....+.....|.-|+..+-.+. .....++...|..|
T Consensus 489 ~~VveaGaVp~LV~LL~s-~s~~vqe~Aa~aL~NLA~d--~~~r~~Vv~~Gaip~Lv~LL~s~~--~~~k~~Aa~AL~nL 563 (810)
T 3now_A 489 TVLANEGITTALCALAKT-ESHNSQELIARVLNAVCGL--KELRGKVVQEGGVKALLRMALEGT--EKGKRHATQALARI 563 (810)
T ss_dssp HHHHHTTHHHHHHHHHTC-CCHHHHHHHHHHHHHHHTS--HHHHHHHHHTTHHHHHHHHHHSSC--HHHHHHHHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHcC-CCHHHHHHHHHHHHHHcCC--HHHHHHHHHCCCHHHHHHHHccCC--HHHHHHHHHHHHHH
Confidence 667788999999999986 5789999999999999853 233333434444444444433321 12223333333333
Q ss_pred cCccCCCCCcchhcccccccCCcccCChhhH---HHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHH
Q 005765 122 LDPKRLTLGTYYMFNRQLTHGSTVTVNPETV---EGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFIS 198 (678)
Q Consensus 122 Le~~r~~~s~y~~~~~~~~~~~~~~v~p~~L---~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa 198 (678)
... .+|... ..+..-++.|.+||..... ...++..+.-+.
T Consensus 564 ~~~----------------------~~p~~~~~~~~~~~aIppLv~LL~~~~~---------------~l~~~eAl~AL~ 606 (810)
T 3now_A 564 GIT----------------------INPEVSFSGQRSLDVIRPLLNLLQQDCT---------------ALENFESLMALT 606 (810)
T ss_dssp HHH----------------------SCHHHHTTTHHHHHTHHHHHHTTSTTSC---------------HHHHHHHHHHHH
T ss_pred hcC----------------------CChhhhhcchhhhcHHHHHHHHhCCCCc---------------HHHHHHHHHHHH
Confidence 220 011110 0123456677777752210 112333444455
Q ss_pred HHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCChHHHHHHhhhccHHHHHHHh
Q 005765 199 VLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 199 ~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n~~Li~hLF~dc~Li~rILea 270 (678)
-|...+ ....+.+++.|.++.|+.|.+.. |-.++.....+|..+.. ....+..+...++.+..++.-
T Consensus 607 NLa~~~-d~~~~~Ii~aG~l~~Lv~LL~s~--~~~Vq~~A~~~L~NLa~--~~~~~~~~v~~~g~l~~Lv~L 673 (810)
T 3now_A 607 NLASMN-ESVRQRIIKEQGVSKIEYYLMED--HLYLTRAAAQCLCNLVM--SEDVIKMFEGNNDRVKFLALL 673 (810)
T ss_dssp HHTTSC-HHHHHHHHHTTHHHHHHHHHHSC--CTTHHHHHHHHHHHHTT--SHHHHHHHHSSSSHHHHHHHG
T ss_pred HHhcCC-HHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhC--ChHHHHHHHhccCcHHHHHHH
Confidence 555443 56778899999999999998853 55677777777777664 334555555446777766654
No 26
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=63.78 E-value=75 Score=35.95 Aligned_cols=154 Identities=11% Similarity=0.129 Sum_probs=90.5
Q ss_pred HHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCC--hhHHh-hcCCHHHHHHHHHHHhcCCCCccchhhhhh
Q 005765 40 SMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAP--PALAA-KISSPNFIGRLFRHALENSRPKSVLVNSLS 116 (678)
Q Consensus 40 il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sP--n~Ll~-~L~S~e~IeqLl~~mL~~~~~~S~LVngIs 116 (678)
-++||.....|..|+.+|..+...+++.||+-.|..+.+-.. ..-++ .+.....+..|++.+..+ ...++..++.
T Consensus 300 Gve~L~~~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~--~~~v~~~A~~ 377 (584)
T 3l6x_A 300 GYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNE--HERVVKAASG 377 (584)
T ss_dssp GGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCS--CHHHHHHHHH
T ss_pred hHHHHhcccHHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCC--CHHHHHHHHH
Confidence 368999999999999999877789999999999999986431 11112 223333344433333222 1234444444
Q ss_pred hhhhccCccCCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHH
Q 005765 117 ICISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEF 196 (678)
Q Consensus 117 VlI~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvEL 196 (678)
.|-.|-. .+ .+...++ ..-++.|++||....... .+.. --..+..+|..
T Consensus 378 aL~nLs~------------------~~---~~~~~I~--~g~ip~LV~LL~~~~~~~--~~~~------s~~v~~~a~~t 426 (584)
T 3l6x_A 378 ALRNLAV------------------DA---RNKELIG--KHAIPNLVKNLPGGQQNS--SWNF------SEDTVISILNT 426 (584)
T ss_dssp HHHHHHT------------------TC---SCHHHHH--HHHHHHHHHTSSSSSCSG--GGTC------CHHHHHHHHHH
T ss_pred HHHHHhC------------------Ch---hHHHHHH--hCCHHHHHHHhcCCcccc--cccc------hHHHHHHHHHH
Confidence 3333322 00 1223332 345778888887543210 0000 01234456666
Q ss_pred HHHHHhcCcHHHHHHHHHhccHHHHHHHHhh
Q 005765 197 ISVLLTVGSEAAEKELIRHGAVRRILDLFFE 227 (678)
Q Consensus 197 Ia~LL~t~n~~i~~eLi~~~i~~~lLdLFFk 227 (678)
+..|+.. +..-.+.+++.|.++.|+.|.-.
T Consensus 427 L~NL~a~-~~~~~~~I~~~g~I~~Lv~LL~s 456 (584)
T 3l6x_A 427 INEVIAE-NLEAAKKLRETQGIEKLVLINKS 456 (584)
T ss_dssp HHHHHTT-CHHHHHHHHHTTHHHHHHHHHTC
T ss_pred HHHHhcC-CHHHHHHHHHCCChHHHHHHHhC
Confidence 6666644 56667889999999999999864
No 27
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=62.81 E-value=92 Score=28.41 Aligned_cols=174 Identities=13% Similarity=0.164 Sum_probs=99.1
Q ss_pred HHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccCccCCC
Q 005765 49 VLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLT 128 (678)
Q Consensus 49 LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe~~r~~ 128 (678)
....|+.+|.. .+.+++.+|+..|..|.+..+ .....+.....|..|+..+-.. ...+...++.++-.|...
T Consensus 13 ~~~~l~~LL~s-~~~~v~~~a~~~L~~l~~~~~-~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~---- 84 (210)
T 4db6_A 13 ELPQMVQQLNS-PDQQELQSALRKLSQIASGGN-EQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASG---- 84 (210)
T ss_dssp CHHHHHHHTTC-SCHHHHHHHHHHHHHHHTSCH-HHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTS----
T ss_pred hhHHHHHHhcC-CCHHHHHHHHHHHHHHHcCCH-HHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhcC----
Confidence 45566666754 578899999999999986643 2223333334555555544332 123334444444444320
Q ss_pred CCcchhcccccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHhcCcH
Q 005765 129 LGTYYMFNRQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVGSE 206 (678)
Q Consensus 129 ~s~y~~~~~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~t~n~ 206 (678)
++.....+.. -++.|.++|..+. -..|...+..+..|... +.
T Consensus 85 -------------------~~~~~~~i~~~g~i~~L~~lL~~~~----------------~~v~~~a~~~L~~l~~~-~~ 128 (210)
T 4db6_A 85 -------------------GNEQIQAVIDAGALPALVQLLSSPN----------------EQILQEALWALSNIASG-GN 128 (210)
T ss_dssp -------------------CHHHHHHHHHTTCHHHHHHHTTCSC----------------HHHHHHHHHHHHHHTTS-CH
T ss_pred -------------------CcHHHHHHHHCCCHHHHHHHHcCCc----------------HHHHHHHHHHHHHHHcC-CH
Confidence 1222222222 4566667776432 14677788888887764 45
Q ss_pred HHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCCChHHHHHHhhhccHHHHHHHh
Q 005765 207 AAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 207 ~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~n~~Li~hLF~dc~Li~rILea 270 (678)
.....+++.|+++.++.++-. + +.-+......++..+... +... ...+.++..+..|++.
T Consensus 129 ~~~~~~~~~~~i~~L~~ll~~-~-~~~v~~~a~~aL~~l~~~-~~~~-~~~~~~~g~i~~L~~l 188 (210)
T 4db6_A 129 EQIQAVIDAGALPALVQLLSS-P-NEQILQEALWALSNIASG-GNEQ-KQAVKEAGALEKLEQL 188 (210)
T ss_dssp HHHHHHHHTTHHHHHHHHTTC-S-CHHHHHHHHHHHHHHHTS-CHHH-HHHHHHTTHHHHHHHG
T ss_pred HHHHHHHHcCcHHHHHHHHcC-C-CHHHHHHHHHHHHHHHcC-CcHH-HHHHHHCCCHHHHHHH
Confidence 566778899999999999764 2 333444444445544432 2333 3445556777777765
No 28
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=59.47 E-value=47 Score=38.01 Aligned_cols=39 Identities=21% Similarity=0.360 Sum_probs=23.4
Q ss_pred HHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHcc
Q 005765 40 SMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRS 79 (678)
Q Consensus 40 il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~ 79 (678)
+..++.+.++++.|+..+.. ...++...|..+|.+|++.
T Consensus 621 ~~~~~~~~~~~~~l~~~l~~-~~~~vr~~a~~~l~~l~~~ 659 (852)
T 4fdd_A 621 IEQLVARSNILTLMYQCMQD-KMPEVRQSSFALLGDLTKA 659 (852)
T ss_dssp GHHHHHTCCHHHHHHHHTTC-SSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHhCC-CChhHHHHHHHHHHHHHHH
Confidence 34455455677777666643 2456666777777777643
No 29
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=58.95 E-value=1.4e+02 Score=31.25 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=79.8
Q ss_pred HHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcC-CHHHHHHHHHHHhcCCCCc--cchhhhhhhh
Q 005765 42 QWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKIS-SPNFIGRLFRHALENSRPK--SVLVNSLSIC 118 (678)
Q Consensus 42 ~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~-S~e~IeqLl~~mL~~~~~~--S~LVngIsVl 118 (678)
.-+.+.+.|+.|+.+|..+.+.+++.+|+..|..|....+. .-..+. ....|..|+..+-...... .+..++..++
T Consensus 164 ~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~-nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL 242 (354)
T 3nmw_A 164 KTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGIL 242 (354)
T ss_dssp HHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHH-HHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChh-hhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHH
Confidence 34456778999999876556788999999999888764321 112222 2334444444433221100 1233333333
Q ss_pred hhccCccCCCCCcchhcccccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHHH
Q 005765 119 ISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEF 196 (678)
Q Consensus 119 I~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvEL 196 (678)
-.|-. + .+.++..-..|.. -++.|+++|..... ..|-..+..
T Consensus 243 ~nLs~--------~------------~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~----------------~v~~~A~~a 286 (354)
T 3nmw_A 243 RNVSS--------L------------IATNEDHRQILRENNCLQTLLQHLKSHSL----------------TIVSNACGT 286 (354)
T ss_dssp HHHHH--------H------------HTTCHHHHHHHHTTTHHHHHHHHTTCSCH----------------HHHHHHHHH
T ss_pred HHHHh--------h------------ccCCHHHHHHHHHcCCHHHHHHHHcCCCh----------------HHHHHHHHH
Confidence 22210 0 0012233333332 36667777763321 145555666
Q ss_pred HHHHHhcCcHHHHHHHHHhccHHHHHHHHh
Q 005765 197 ISVLLTVGSEAAEKELIRHGAVRRILDLFF 226 (678)
Q Consensus 197 Ia~LL~t~n~~i~~eLi~~~i~~~lLdLFF 226 (678)
|..|.. ++..-.+.+++.|+++.|++|.-
T Consensus 287 L~nLa~-~~~~~~~~i~~~G~i~~Lv~LL~ 315 (354)
T 3nmw_A 287 LWNLSA-RNPKDQEALWDMGAVSMLKNLIH 315 (354)
T ss_dssp HHHHTS-SCHHHHHHHHHTTHHHHHHTTTT
T ss_pred HHHHhC-CCHHHHHHHHHCCCHHHHHHHHh
Confidence 666642 45667788999999999988764
No 30
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=57.40 E-value=2.3e+02 Score=31.27 Aligned_cols=160 Identities=11% Similarity=0.074 Sum_probs=85.8
Q ss_pred hhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCC---CCc--cchh------
Q 005765 44 IEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENS---RPK--SVLV------ 112 (678)
Q Consensus 44 L~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~---~~~--S~LV------ 112 (678)
+.+.+.++.|+.+|....+..+...|+.+|+.|.....+. ..+.....|..|+..+-... +.+ .++.
T Consensus 348 v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~~~--~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~ 425 (644)
T 2z6h_A 348 VRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANH--APLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVE 425 (644)
T ss_dssp HHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGH--HHHHHTTHHHHHHHHHHHHHHHHTTC----------CC
T ss_pred HHHccChHHHHHHhCccCchHHHHHHHHHHHHHccCHHHH--HHHHHcCCHHHHHHHHhccchhhhhHhhhccccchhcc
Confidence 3456789999999998877889999999999987653221 33333344555544433211 000 0000
Q ss_pred ---------hhhhhhhhccCccCCCCCcchhcccccccCCcccCChhhHHHHH--HhHHHHHHhhcCCCccccccccccc
Q 005765 113 ---------NSLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGML--GRLGDLLKLLDVSSEESSLLTTYGK 181 (678)
Q Consensus 113 ---------ngIsVlI~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail--~~L~df~~LL~~~~~~~~l~TT~G~ 181 (678)
.++..+-.|.. ++..-..+. ..++.|.++|...
T Consensus 426 ~~~~~~v~~~a~~aL~~La~------------------------~~~~~~~l~~~~~i~~Lv~lL~~~------------ 469 (644)
T 2z6h_A 426 GVRMEEIVEGCTGALHILAR------------------------DVHNRIVIRGLNTIPLFVQLLYSP------------ 469 (644)
T ss_dssp SSCHHHHHHHHHHHHHHHTT------------------------SHHHHHHHHHTTCHHHHHHHTTCS------------
T ss_pred cccHHHHHHHHHHHHHHHhc------------------------CHHHHHHHHhCCcHHHHHHHHcCC------------
Confidence 00111111100 111111221 2355666666422
Q ss_pred ccCCccchhHHHHHHHHHHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCC
Q 005765 182 LQPPLGKHRLKIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECK 249 (678)
Q Consensus 182 l~pPLG~~RLKIvELIa~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILes~ 249 (678)
-...|...+..+..|.. +......|.+.|.+..|.+|... + |.-+......++..+....
T Consensus 470 ----~~~v~~~a~~aL~~l~~--~~~~~~~i~~~g~l~~L~~ll~~-~-~~~vr~~A~~aL~~l~~~~ 529 (644)
T 2z6h_A 470 ----IENIQRVAAGVLCELAQ--DKEAAEAIEAEGATAPLTELLHS-R-NEGVATYAAAVLFRMSEDK 529 (644)
T ss_dssp ----CHHHHHHHHHHHHHHHT--SHHHHHHHHHTTCHHHHHHHTTC-S-CHHHHHHHHHHHHHHTTTS
T ss_pred ----CHHHHHHHHHHHHHHHc--CHHHHHHHHHcCChhHHHHHHcC-C-CHHHHHHHHHHHHHHhccC
Confidence 22466677777777764 35677888889999999988642 2 4444444444555554433
No 31
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=56.84 E-value=98 Score=32.97 Aligned_cols=183 Identities=18% Similarity=0.254 Sum_probs=94.6
Q ss_pred hHHHHhhh-hhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhh
Q 005765 39 ESMQWIED-TNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSI 117 (678)
Q Consensus 39 ~il~WL~E-q~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsV 117 (678)
-..+||.. .+++..|+.-.. ..++-.+++.+|.+-||. ..|++.+-..+.+.+||+.+-... --+..-+.+.
T Consensus 115 p~v~Yl~~~peil~~L~~gYe---~~diAl~~G~mLRecir~--e~la~~iL~~~~f~~fF~yv~~~~--FdiasDAf~T 187 (341)
T 1upk_A 115 PTVEYICTQQNILFMLLKGYE---SPEIALNCGIMLRECIRH--EPLAKIILWSEQFYDFFRYVEMST--FDIASDAFAT 187 (341)
T ss_dssp HHHHHHHTCTHHHHHHHHGGG---STTTHHHHHHHHHHHHTS--HHHHHHHHHSGGGGHHHHHTTCSS--HHHHHHHHHH
T ss_pred chhHHHHcCHHHHHHHHHhhc---cchhHhHHHHHHHHHHHh--HHHHHHHhccHHHHHHHHHhcCCC--chHHHHHHHH
Confidence 35677776 446666665554 458888999999999997 445543332233445555443221 0111122233
Q ss_pred hhhccCccCCCCCcchhcccccccCCcccCChhhHHHH-HHh----HHHHHHhhcCCCcccccccccccccCCccchhHH
Q 005765 118 CISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGM-LGR----LGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLK 192 (678)
Q Consensus 118 lI~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ai-l~~----L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLK 192 (678)
+=+||.. .+..+..+ ..+ +..+.+||..... .+|.+
T Consensus 188 fkelLt~-----------------------Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NY----------------VTkRQ 228 (341)
T 1upk_A 188 FKDLLTR-----------------------HKLLSAEFLEQHYDRFFSEYEKLLHSENY----------------VTKRQ 228 (341)
T ss_dssp HHHHHHS-----------------------SHHHHHHHHHHTHHHHHHHHHHHTTCSSH----------------HHHHH
T ss_pred HHHHHhc-----------------------cHHHHHHHHHHhHHHHHHHHHHHhcCCcc----------------hhHHH
Confidence 3333331 12222222 222 3344456654432 47889
Q ss_pred HHHHHHHHHhc-CcHHHHHHHH-HhccHHHHHHHHhhcCCCc-hhHHHHHHHHHHHhcC-CChHHHHHHhhh-ccHHHHH
Q 005765 193 IVEFISVLLTV-GSEAAEKELI-RHGAVRRILDLFFEYPYNN-FLHHHVENIILSCLEC-KNAPLIEHLLHE-CNLVGKI 267 (678)
Q Consensus 193 IvELIa~LL~t-~n~~i~~eLi-~~~i~~~lLdLFFkYpwNN-fLH~~Ve~iI~~ILes-~n~~Li~hLF~d-c~Li~rI 267 (678)
-++|+.+||.- .|-.+..+.+ +..-++.++.|+-.=.-|= |---+|++++.+ +. +...++.=|.+. -+|+.++
T Consensus 229 SlKLLgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVA--NP~K~~~I~~IL~~Nr~kLl~fl 306 (341)
T 1upk_A 229 SLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVA--NPNKTQPILDILLKNQAKLIEFL 306 (341)
T ss_dssp HHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH--CSSCCHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeee--CCCCChHHHHHHHHHHHHHHHHH
Confidence 99999888765 3444444444 4467788887765433332 224566776553 43 334444444443 3455554
Q ss_pred HH
Q 005765 268 LE 269 (678)
Q Consensus 268 Le 269 (678)
-+
T Consensus 307 ~~ 308 (341)
T 1upk_A 307 SK 308 (341)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 32
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=56.63 E-value=2.8 Score=42.28 Aligned_cols=15 Identities=20% Similarity=0.499 Sum_probs=1.8
Q ss_pred ccCCCCCCCCCCCCC
Q 005765 587 IDENPSSKPSEPSES 601 (678)
Q Consensus 587 ~~~~~~~~p~~~~~~ 601 (678)
..++....|..|+.|
T Consensus 213 ~~~~~~~~p~~~~~~ 227 (268)
T 1wcz_A 213 INFANDDQPNNPDNP 227 (268)
T ss_dssp CCBC-----------
T ss_pred cccCCccCCCCCCCC
Confidence 444444444444333
No 33
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=50.48 E-value=1e+02 Score=32.85 Aligned_cols=152 Identities=10% Similarity=0.104 Sum_probs=83.6
Q ss_pred HHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCCh---hHHh-hcCCHHHHHHHHHHHhcCCCCccchhhhh
Q 005765 40 SMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPP---ALAA-KISSPNFIGRLFRHALENSRPKSVLVNSL 115 (678)
Q Consensus 40 il~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn---~Ll~-~L~S~e~IeqLl~~mL~~~~~~S~LVngI 115 (678)
..+||-+.+.|+.|+.+|..+.++++..+|+-.|..|++-... ...+ .+.....+..|++.+-.+. .-+...++
T Consensus 275 ~~~~l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~~--~~v~~~A~ 352 (457)
T 1xm9_A 275 GSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGA 352 (457)
T ss_dssp GGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCSC--HHHHHHHH
T ss_pred HHHHHhCcchHHHHHHHHhhcCCHHHHHHHHHHHHHhccCcCcchHHHHHHHHHHcCCchHHHHHHhCCC--HhHHHHHH
Confidence 3578888999999999999888899999999999999875421 1111 1112222333333322221 11222222
Q ss_pred hhhhhccCccCCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHH
Q 005765 116 SICISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVE 195 (678)
Q Consensus 116 sVlI~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvE 195 (678)
..+-.|-. .. .....+. ..-++.|+++|.....+. . .=-..-..++.
T Consensus 353 ~aL~nls~------------------~~---~~~~~i~--~~~i~~Lv~lL~~~~~~~---------~-~~~~v~~~~l~ 399 (457)
T 1xm9_A 353 SLLSNMSR------------------HP---LLHRVMG--NQVFPEVTRLLTSHTGNT---------S-NSEDILSSACY 399 (457)
T ss_dssp HHHHHHHT------------------SG---GGHHHHH--HHTHHHHHHTTTSCCSCS---------T-THHHHHHHHHH
T ss_pred HHHHHHhc------------------CH---HHHHHHH--HhhhHHHHHhccCCCCCC---------C-CcHHHHHHHHH
Confidence 22222211 00 0111221 135777888887543210 0 00012335666
Q ss_pred HHHHHHhcCcHHHHHHHHHhccHHHHHHHHhh
Q 005765 196 FISVLLTVGSEAAEKELIRHGAVRRILDLFFE 227 (678)
Q Consensus 196 LIa~LL~t~n~~i~~eLi~~~i~~~lLdLFFk 227 (678)
.+..|+..+ ......+.+.|.+..|++|.-.
T Consensus 400 ~l~ni~~~~-~~~~~~i~~~g~l~~L~~L~~~ 430 (457)
T 1xm9_A 400 TVRNLMASQ-PQLAKQYFSSSMLNNIINLCRS 430 (457)
T ss_dssp HHHHHHTTC-THHHHHHCCHHHHHHHHHHHHC
T ss_pred HHHHHHhcC-HHHHHHHHHcCCHHHHHHHHcC
Confidence 667777654 4467778889999999988764
No 34
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=50.30 E-value=2.5e+02 Score=32.79 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=22.2
Q ss_pred hHHHHHHHhhCCCCCHHHHHhHHHHHHHHHcc
Q 005765 48 NVLEMIVDKFSSSDSPEVHANAAETLCSITRS 79 (678)
Q Consensus 48 ~LIerLId~L~ps~s~evhsNAaeiLceIIr~ 79 (678)
.+++.|+..|.. .+.-++..||..|..+++.
T Consensus 496 ~~l~~l~~~L~d-~~~~V~~~A~~Al~~~~~~ 526 (960)
T 1wa5_C 496 ELMPILATFLQT-DEYVVYTYAAITIEKILTI 526 (960)
T ss_dssp HHHHHHHHHTTC-SCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCC-CChhHHHHHHHHHHHHHhc
Confidence 356666777763 3567888999999888764
No 35
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=47.60 E-value=2.2e+02 Score=31.00 Aligned_cols=185 Identities=17% Similarity=0.131 Sum_probs=95.6
Q ss_pred hhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccCcc
Q 005765 46 DTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPK 125 (678)
Q Consensus 46 Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe~~ 125 (678)
..++|+.|+.+|. +.+.+++.+|+-.|..|.....+.--..+.....|..|+..++... ...+..+++..+.+|-..
T Consensus 241 ~~GaIp~LV~LL~-s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~-~~~v~~~A~~aL~nLs~~- 317 (458)
T 3nmz_A 241 MKGCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVK-KESTLKSVLSALWNLSAH- 317 (458)
T ss_dssp CHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHHH-
T ss_pred cCCcHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHccC-
Confidence 4677999999998 4678999999999988865321222222333345666666655432 234445555555444220
Q ss_pred CCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHh--c
Q 005765 126 RLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLT--V 203 (678)
Q Consensus 126 r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~--t 203 (678)
.+. +...+.....-|+-|.++|....... . + ..+-..+-.+..|-. +
T Consensus 318 ------~~~-------------nk~~I~~~~Gal~~Lv~LL~~~~~~~-------~----~-~v~~~A~~aL~nLs~~~a 366 (458)
T 3nmz_A 318 ------CTE-------------NKADICAVDGALAFLVGTLTYRSQTN-------T----L-AIIESGGGILRNVSSLIA 366 (458)
T ss_dssp ------CHH-------------HHHHHHHSTTHHHHHHHHTTCCCSSS-------T----T-HHHHHHHHHHHHHHHHHT
T ss_pred ------CHH-------------HHHHHHHhcCcHHHHHHHhcCCCCcc-------h----H-HHHHHHHHHHHHHHhccc
Confidence 000 00001001123555666665332110 0 0 123333444444433 2
Q ss_pred CcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhc--CCChHHHHHHhhhccHHHHHHHh
Q 005765 204 GSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLE--CKNAPLIEHLLHECNLVGKILEA 270 (678)
Q Consensus 204 ~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILe--s~n~~Li~hLF~dc~Li~rILea 270 (678)
.+....+.+++.|.++.++.|.-.-. + ...+..+..+.+ ..+..-... +.++..+..|++-
T Consensus 367 ~~~~~~~~i~~~G~i~~Lv~LL~~~~---~--~v~~~A~~aL~nLa~~~~~~~~~-i~~~G~I~~Lv~L 429 (458)
T 3nmz_A 367 TNEDHRQILRENNCLQTLLQHLKSHS---L--TIVSNACGTLWNLSARNPKDQEA-LWDMGAVSMLKNL 429 (458)
T ss_dssp TCHHHHHHHHHTTHHHHHHHHSSCSC---H--HHHHHHHHHHHHHHSSCHHHHHH-HHHHTHHHHHHTT
T ss_pred CCHHHHHHHHHcccHHHHHHHHcCCC---h--HHHHHHHHHHHHHHcCCHHHHHH-HHHCCCHHHHHHH
Confidence 56677888999999999999976432 1 122333322222 234444433 3455666766653
No 36
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=47.33 E-value=1.8e+02 Score=31.66 Aligned_cols=148 Identities=12% Similarity=0.097 Sum_probs=80.5
Q ss_pred HHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcC-CHHHHHHHHHHHhcCCCCc--cchhhhhhh
Q 005765 41 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKIS-SPNFIGRLFRHALENSRPK--SVLVNSLSI 117 (678)
Q Consensus 41 l~WL~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~-S~e~IeqLl~~mL~~~~~~--S~LVngIsV 117 (678)
.+.+.+.+.|+.|+.+|..+.+.+++.+|+..|..|....+. .-..+. ....|..|+..+....... .+..++..+
T Consensus 279 k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~-nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~a 357 (458)
T 3nmz_A 279 KKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGI 357 (458)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHH-HHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHH-HHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHH
Confidence 344556788999999877666788899999888888763311 111221 2233333333332221100 122233332
Q ss_pred hhhccCccCCCCCcchhcccccccCCcccCChhhHHHHHH--hHHHHHHhhcCCCcccccccccccccCCccchhHHHHH
Q 005765 118 CISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLG--RLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVE 195 (678)
Q Consensus 118 lI~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~--~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvE 195 (678)
+-.|-. | .+.++.....|.. -++.|+++|..... ..+-..+.
T Consensus 358 L~nLs~--------~------------~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~----------------~v~~~A~~ 401 (458)
T 3nmz_A 358 LRNVSS--------L------------IATNEDHRQILRENNCLQTLLQHLKSHSL----------------TIVSNACG 401 (458)
T ss_dssp HHHHHH--------H------------HTTCHHHHHHHHHTTHHHHHHHHSSCSCH----------------HHHHHHHH
T ss_pred HHHHHh--------c------------ccCCHHHHHHHHHcccHHHHHHHHcCCCh----------------HHHHHHHH
Confidence 222210 0 0012333333332 36667777763321 25556677
Q ss_pred HHHHHHhcCcHHHHHHHHHhccHHHHHHHHh
Q 005765 196 FISVLLTVGSEAAEKELIRHGAVRRILDLFF 226 (678)
Q Consensus 196 LIa~LL~t~n~~i~~eLi~~~i~~~lLdLFF 226 (678)
.|..|-. ++......+++.|+++.|++|.-
T Consensus 402 aL~nLa~-~~~~~~~~i~~~G~I~~Lv~LL~ 431 (458)
T 3nmz_A 402 TLWNLSA-RNPKDQEALWDMGAVSMLKNLIH 431 (458)
T ss_dssp HHHHHHS-SCHHHHHHHHHHTHHHHHHTTTT
T ss_pred HHHHHHc-CCHHHHHHHHHCCCHHHHHHHHh
Confidence 7777653 45667888999999999998863
No 37
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=45.48 E-value=2.8e+02 Score=28.82 Aligned_cols=184 Identities=17% Similarity=0.126 Sum_probs=97.5
Q ss_pred hhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccCcc
Q 005765 46 DTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPK 125 (678)
Q Consensus 46 Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe~~ 125 (678)
..++|+.|+.+|.. .+.+++.+|+-.|..|.....+.....+.....|..|+..++... ...+..+++..+.+|-...
T Consensus 125 ~~GaIp~LV~LL~s-~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~-~~~~~~~A~~aL~nLs~~~ 202 (354)
T 3nmw_A 125 MKGCMRALVAQLKS-ESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVK-KESTLKSVLSALWNLSAHC 202 (354)
T ss_dssp CHHHHHHHHHGGGC-SCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHTTC
T ss_pred cCCcHHHHHHHHCC-CCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHHccC
Confidence 46789999999984 577999999999999976422222233333456777777666532 2344555555555552200
Q ss_pred CCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHHHh--c
Q 005765 126 RLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLT--V 203 (678)
Q Consensus 126 r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~LL~--t 203 (678)
.. +...+.....-++-|.++|....... -+ ..+-..+-.+..|-. +
T Consensus 203 ----~~----------------nk~~i~~~~Gai~~Lv~lL~~~~~~~-----------~~-~v~~~A~~aL~nLs~~~a 250 (354)
T 3nmw_A 203 ----TE----------------NKADICAVDGALAFLVGTLTYRSQTN-----------TL-AIIESGGGILRNVSSLIA 250 (354)
T ss_dssp ----HH----------------HHHHHHHSTTHHHHHHHHTTCCCSSS-----------CC-HHHHHHHHHHHHHHHHHT
T ss_pred ----hh----------------hhHHHHHhcCcHHHHHHHhccCCCcc-----------cH-HHHHHHHHHHHHHHhhcc
Confidence 00 00001001123555666775332110 00 123333444444432 2
Q ss_pred CcHHHHHHHHHhccHHHHHHHHhhcCCCchhHHHHHHHHHHHhc--CCChHHHHHHhhhccHHHHHHH
Q 005765 204 GSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLE--CKNAPLIEHLLHECNLVGKILE 269 (678)
Q Consensus 204 ~n~~i~~eLi~~~i~~~lLdLFFkYpwNNfLH~~Ve~iI~~ILe--s~n~~Li~hLF~dc~Li~rILe 269 (678)
.+....+.+++.|.++.++.|.-.-. . ...+..+..+.+ ..+..-... +.++..+..+++
T Consensus 251 ~~~~~~~~i~~~g~i~~Lv~lL~~~~--~---~v~~~A~~aL~nLa~~~~~~~~~-i~~~G~i~~Lv~ 312 (354)
T 3nmw_A 251 TNEDHRQILRENNCLQTLLQHLKSHS--L---TIVSNACGTLWNLSARNPKDQEA-LWDMGAVSMLKN 312 (354)
T ss_dssp TCHHHHHHHHTTTHHHHHHHHTTCSC--H---HHHHHHHHHHHHHTSSCHHHHHH-HHHTTHHHHHHT
T ss_pred CCHHHHHHHHHcCCHHHHHHHHcCCC--h---HHHHHHHHHHHHHhCCCHHHHHH-HHHCCCHHHHHH
Confidence 45667788999999999999986422 1 133333333222 234444333 345666776665
No 38
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=44.49 E-value=8.5 Score=46.84 Aligned_cols=10 Identities=50% Similarity=1.122 Sum_probs=0.0
Q ss_pred CCCCCCCCCC
Q 005765 602 GSPSEPAESG 611 (678)
Q Consensus 602 ~~p~~p~~p~ 611 (678)
|.||.||.||
T Consensus 14 ~~~~~~~~~~ 23 (1083)
T 2fhf_A 14 GSPGNPGNPG 23 (1083)
T ss_dssp ----------
T ss_pred CCCCCCCCCC
Confidence 3333333333
No 39
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=41.48 E-value=3.5e+02 Score=31.85 Aligned_cols=198 Identities=11% Similarity=0.060 Sum_probs=112.4
Q ss_pred hhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCC-CccchhhhhhhhhhccCc
Q 005765 46 DTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSR-PKSVLVNSLSICISLLDP 124 (678)
Q Consensus 46 Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~-~~S~LVngIsVlI~LLe~ 124 (678)
.++-+++|..+|+...++|...+|-.+|.++++-+++-... +...-.+.+|+.+|..... ...+..+.++.++.-|..
T Consensus 47 ~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (810)
T 3now_A 47 KDHCIAKVASLTKVEKDQDIYVNMVHLVAALCENSVERTKG-VLTELGVPWFMRVLDQKHENCVSTAQFCLQTILNALSG 125 (810)
T ss_dssp HTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHH-HHHHSCHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHT
T ss_pred hCchHHHHHHHHhccCchhHHHHHHHHHHHHHhccHHHHHH-HHHHcCHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhc
Confidence 34457788888887689999999999999999876443322 2233345567777765332 122233444555554431
Q ss_pred cCCCCCcchhcccccccCCcccCChhhHHH----HHHhHHHHHHhhcCCCcccccccccccccCCccchhHHHHHHHHHH
Q 005765 125 KRLTLGTYYMFNRQLTHGSTVTVNPETVEG----MLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVL 200 (678)
Q Consensus 125 ~r~~~s~y~~~~~~~~~~~~~~v~p~~L~a----il~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKIvELIa~L 200 (678)
....+ .+++ ++..+.. +..-|..|+.+|.... -=|..|=.+++|+.--
T Consensus 126 ---~~~~~-------~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~--------------~~~~~r~~~~~~~~~~ 177 (810)
T 3now_A 126 ---LKNKP-------DSKP----DKELCTRNNREIDTLLTCLVYSITDRT--------------ISGAARDGVIELITRN 177 (810)
T ss_dssp ---CCSST-------TCCC----CHHHHHHTHHHHHHHHHHHHHHHTCTT--------------SCHHHHHHHHHHHHHH
T ss_pred ---ccccc-------ccCC----cHHHHhhhhhHHHHHHHHHHHHhhccc--------------cChhhHHHHHHHHHHh
Confidence 00000 0111 2333222 2222333334443222 3467899999999888
Q ss_pred HhcCcHHHHHHHHHhccHHHHHHHHhh---c------CCCchhHHHHHHHHHHHhcCC------------ChHHHHHHhh
Q 005765 201 LTVGSEAAEKELIRHGAVRRILDLFFE---Y------PYNNFLHHHVENIILSCLECK------------NAPLIEHLLH 259 (678)
Q Consensus 201 L~t~n~~i~~eLi~~~i~~~lLdLFFk---Y------pwNNfLH~~Ve~iI~~ILes~------------n~~Li~hLF~ 259 (678)
+..........+...+-+..+|+...+ | |--.=.+.++--|+..+++.- -..++...|.
T Consensus 178 ~~~~~~~~~~~~~~~~g~~~~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (810)
T 3now_A 178 VHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFTDQIDEYIKDKLL 257 (810)
T ss_dssp TTCTTTTHHHHHHHTTHHHHHHHHHTCCSSSCCSSCCCCCTTHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCccccccccchhhHhhHHHHHHHHhcCccccccccCCCChhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHhc
Confidence 876654445557777788889988876 2 222334555555677766532 1456666666
Q ss_pred hccHHHHHHHhhh
Q 005765 260 ECNLVGKILEAEK 272 (678)
Q Consensus 260 dc~Li~rILea~k 272 (678)
+.++=.+|..+|-
T Consensus 258 ~~~~~~~~~a~~a 270 (810)
T 3now_A 258 APDMESKVRVTVA 270 (810)
T ss_dssp SCCHHHHHHHHHH
T ss_pred cCChHhHHHHHHH
Confidence 6666555555443
No 40
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=37.32 E-value=7.4 Score=39.27 Aligned_cols=54 Identities=20% Similarity=0.593 Sum_probs=3.4
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 005765 585 KSIDENPSSKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESV 638 (678)
Q Consensus 585 ~s~~~~~~~~p~~~~~~~~p~~p~~p~~p~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (678)
..+.++.+.+|.-|-.+..|-.|-.|.+|..|..|.+|.+|..|.-|..|-.|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (274)
T 2o8l_A 211 EDINFANDDQPNNPDNPDNPNNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGD 264 (274)
T ss_dssp TTCEEC------------------------------------------------
T ss_pred hhhccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 345666666666666655555555555555555555555544444444444333
No 41
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=35.42 E-value=1.3e+02 Score=34.28 Aligned_cols=51 Identities=12% Similarity=0.210 Sum_probs=33.8
Q ss_pred hHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHH
Q 005765 48 NVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHA 101 (678)
Q Consensus 48 ~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~m 101 (678)
.+++.|+..|... +..++.+|+..|..+++..+..+...+ +..+..|+..+
T Consensus 442 ~ll~~L~~~L~d~-~~~vr~~a~~aL~~l~~~~~~~l~~~l--~~ll~~L~~~l 492 (852)
T 4fdd_A 442 PLMTELLKRILDS-NKRVQEAACSAFATLEEEACTELVPYL--AYILDTLVFAF 492 (852)
T ss_dssp HHHHHHHHHHTCS-SHHHHHHHHHHHHHHHHHHGGGGGGGH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHhhHhhHhHH--HHHHHHHHHHH
Confidence 5778888887643 678999999999998865444333332 45555555544
No 42
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=30.79 E-value=3.4e+02 Score=31.88 Aligned_cols=165 Identities=11% Similarity=0.072 Sum_probs=88.6
Q ss_pred hHHHHhhh-hhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCC---C-ccchhh
Q 005765 39 ESMQWIED-TNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSR---P-KSVLVN 113 (678)
Q Consensus 39 ~il~WL~E-q~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~---~-~S~LVn 113 (678)
.+.++|.+ +.++++|++++....+...|.-|..+|..+++..++. -.....+.+|-.++=...+ . ...+-.
T Consensus 366 ~VKe~L~~d~~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~----~~e~~~l~~Lk~~A~~~~p~~~~~d~~~~~ 441 (778)
T 3opb_A 366 SVKIMIRSNESFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEX----XXXXXXXXXXXXXXXXXXPAADKVGAEKAA 441 (778)
T ss_dssp HHHHHHHHCHHHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCC----CCCCC------------------CCTHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCccc----chhhhhhhhhhhhccccCcccCcccccccc
Confidence 45667755 7789999999987667788999999999998765421 0001244555544421100 0 000000
Q ss_pred hhhhhhhccCccCCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhHHH
Q 005765 114 SLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKI 193 (678)
Q Consensus 114 gIsVlI~LLe~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RLKI 193 (678)
- .+...++...-+ .. .-++-|..+|... --..|-.+
T Consensus 442 ~---------------~~v~~~~~~~l~------ea-------GvIp~Lv~Ll~S~----------------s~~~re~A 477 (778)
T 3opb_A 442 K---------------EDILLFNEKYIL------RT-------ELISFLKREMHNL----------------SPNCKQQV 477 (778)
T ss_dssp H---------------HHHHHHHHHHTT------TT-------THHHHHHHHGGGS----------------CHHHHHHH
T ss_pred h---------------HHHHHHHHHHHH------HC-------cCHHHHHHHHcCC----------------CHHHHHHH
Confidence 0 000000000000 00 1223334454422 12578889
Q ss_pred HHHHHHHHhcCcHHHHHHHHHhccHHHHHHHHhhcCCC-chhHHHHHHHHHHHhcCCChHH
Q 005765 194 VEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYN-NFLHHHVENIILSCLECKNAPL 253 (678)
Q Consensus 194 vELIa~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpwN-NfLH~~Ve~iI~~ILes~n~~L 253 (678)
++.|..| +.+......+++.|.++.|+.+.....-+ +-.+...-..+..++-+.+..+
T Consensus 478 ~~aL~nL--S~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~ 536 (778)
T 3opb_A 478 VRIIYNI--TRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGL 536 (778)
T ss_dssp HHHHHHH--HTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHH--cCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHH
Confidence 9999988 45677899999999999999998887544 3356555666666665555544
No 43
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=27.61 E-value=1.8e+02 Score=32.63 Aligned_cols=21 Identities=10% Similarity=0.189 Sum_probs=10.3
Q ss_pred hHHHHHHHHHHHhcCcHHHHH
Q 005765 190 RLKIVEFISVLLTVGSEAAEK 210 (678)
Q Consensus 190 RLKIvELIa~LL~t~n~~i~~ 210 (678)
+.+|+++++.+....+.....
T Consensus 258 qi~il~ll~~~~~~~d~~~~~ 278 (621)
T 2vgl_A 258 SVKLLRLLQCYPPPEDPAVRG 278 (621)
T ss_dssp HHHHHHHGGGSSSCSSHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHH
Confidence 344566665555444444333
No 44
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=26.09 E-value=4e+02 Score=30.06 Aligned_cols=189 Identities=9% Similarity=0.119 Sum_probs=93.1
Q ss_pred hhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHccCChhHHhhcCCHHHHHHHHHHHhcCCCCccchhhhhhhhhhccC
Q 005765 44 IEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSAPPALAAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLD 123 (678)
Q Consensus 44 L~Eq~LIerLId~L~ps~s~evhsNAaeiLceIIr~sPn~Ll~~L~S~e~IeqLl~~mL~~~~~~S~LVngIsVlI~LLe 123 (678)
+.+.++++ |+++|... +.+....||..|+.|+. . ....+.+..+..|..++..+|.+. ...+-+.+.+.+=.|-.
T Consensus 31 ~~~~~i~P-ll~~L~S~-~~~~r~~A~~al~~l~~-~-~~~~~l~~~~~~v~~ll~~lL~D~-~~~Vr~~A~gaLrnL~~ 105 (684)
T 4gmo_A 31 LREDKILP-VLKDLKSP-DAKSRTTAAGAIANIVQ-D-AKCRKLLLREQVVHIVLTETLTDN-NIDSRAAGWEILKVLAQ 105 (684)
T ss_dssp HHHHTTHH-HHHHHSSS-CCSHHHHHHHHHHHHTT-S-HHHHHHHHHTTHHHHHHHTTTTCS-CHHHHHHHHHHHHHHHH
T ss_pred cchhhHHH-HHHHcCCC-CHHHHHHHHHHHHHHHc-C-cHHHHHHHHcCCHHHHHHHHcCCC-CHHHHHHHHHHHHHHHh
Confidence 44455555 66778765 44556689999999985 2 333444555667777777777654 24555566655544422
Q ss_pred ccCCCCCcchhcccccccCCcccCChhhHHHHHHhHHHHHHhhcCCCcccccccccccccCCccchhH-------HHHHH
Q 005765 124 PKRLTLGTYYMFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRL-------KIVEF 196 (678)
Q Consensus 124 ~~r~~~s~y~~~~~~~~~~~~~~v~p~~L~ail~~L~df~~LL~~~~~~~~l~TT~G~l~pPLG~~RL-------KIvEL 196 (678)
.+-|+.+.... +..++..++..|.....-+.... +... ..--..|- .++.+
T Consensus 106 -----~~g~d~~~~l~--------~~~il~~L~~~l~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~l~l 163 (684)
T 4gmo_A 106 -----EEEADFCVHLY--------RLDVLTAIEHAAKAVLETLTTSE------PPFS---KLLKAQQRLVWDITGSLLVL 163 (684)
T ss_dssp -----HSCHHHHHHHH--------HTTHHHHHHHHHHHHHHHHHCBT------TBGG---GSCHHHHHHHHHHHHHHHHH
T ss_pred -----hcCchHHHHHH--------HcChHHHHHHHHHhhHHHHhhhc------cccc---cccHHHHHHHHHHHHHHHHH
Confidence 11233221100 01122222222222222111100 0000 00011111 24445
Q ss_pred HHHHHhcCcHHHHHHHHHhccHHHHHHHHhhcCC-CchhHHHHHHHHHHHhcCCChHHHHHHhhhc
Q 005765 197 ISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPY-NNFLHHHVENIILSCLECKNAPLIEHLLHEC 261 (678)
Q Consensus 197 Ia~LL~t~n~~i~~eLi~~~i~~~lLdLFFkYpw-NNfLH~~Ve~iI~~ILes~n~~Li~hLF~dc 261 (678)
+..|-.++ ..+...+...+.+..++.++..+.- .--+...+.+|+..+ ...|..++..+-.+.
T Consensus 164 L~~L~e~s-~~~~~~v~~~~~l~~l~~~L~~~~~~~~~v~~~a~~~L~~l-s~dn~~~~~~i~~~~ 227 (684)
T 4gmo_A 164 IGLLALAR-DEIHEAVATKQTILRLLFRLISADIAPQDIYEEAISCLTTL-SEDNLKVGQAITDDQ 227 (684)
T ss_dssp HHHHHHHC-HHHHHHHHTCHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH-HTTCHHHHHHHHTCC
T ss_pred HHHHHhCC-HHHHHHHHhcccHHHHHHHHHhcCCCcHHHHHHHHHHHHHH-hccCHHHHHHHHhcc
Confidence 55554444 3455667778888888887765422 122455555555433 355777777776654
No 45
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=24.56 E-value=4e+02 Score=29.77 Aligned_cols=62 Identities=11% Similarity=0.160 Sum_probs=36.6
Q ss_pred cchHHHHHHHHhccCCCCC--cChhhHHHHhhh--hhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHc
Q 005765 16 ITSIMEVLIRLIGADEHMY--TNFTESMQWIED--TNVLEMIVDKFSSSDSPEVHANAAETLCSITR 78 (678)
Q Consensus 16 tsaImDlLLRLIt~de~~~--~~~~~il~WL~E--q~LIerLId~L~ps~s~evhsNAaeiLceIIr 78 (678)
++-|+|+|..|+.+|++.. .-+..+++.|.- ...+..|.+.+..+ ++.+-..+-.||++-+.
T Consensus 98 i~kiaDvL~QlLqtdd~~E~~~V~~sL~sllk~Dpk~tl~~lf~~i~~~-~e~~Rer~lkFi~~kl~ 163 (507)
T 3u0r_A 98 LPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQILQG-EDIVRERAIKFLSTKLK 163 (507)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHGG
T ss_pred hhhHHHHHHHHHhccchHHHHHHHHHHHHHHhcChHHHHHHHHHHHccc-chHHHHHHHHHHHHHHh
Confidence 6779999999999988621 011222333322 34566666666554 34444566677777654
No 46
>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A*
Probab=23.47 E-value=20 Score=41.29 Aligned_cols=8 Identities=25% Similarity=0.738 Sum_probs=0.0
Q ss_pred CCCCCCCC
Q 005765 630 TPSEPSES 637 (678)
Q Consensus 630 ~~~~~~~~ 637 (678)
.|..|+.|
T Consensus 47 ~~~~~~~~ 54 (703)
T 3nwa_A 47 KPKNPTPP 54 (703)
T ss_dssp --------
T ss_pred CCCCCCCC
Confidence 33333333
Done!