Your job contains 1 sequence.
>005768
MIPSLSTARSNWLELQSKLIMKKFEESNICVAGEPVKVDIEFKNPLQIPISISNISLICE
LSTRSDEMESDSNSSTTELQNDEESKLLTTTGEMNSDTSSFTLSEVDISLGGAETILVQL
MVTPKVEGILKIVGVRWRLSGSLVGVYNFESNLVKKKIAKGRRKVKSSPSNDLKFIVIKS
LPKLEGLIHPLPERAYAGDLRHLVLELKNQSDFSVKNLKMKVSHPRFLSIGNRDDMTKEF
PACLQKMTNAEQSVAGGNFNKMPQAVFSFPEGISIQGETPLLWPLWYRAAVPGKISLSIT
IYYEMGDVSSVIKYRLLRMHYNLEVLPSLNVSFQISPWSSRLQQYLVRMDVVNQTSSENF
QIHQLSSVGHQWEISLLQPFDSIFPSESLFAGQALSCFFMLKNRGESSTSSDDTSSPSRL
LGSDVSLQGTADTLFDISGSPLADFHAHERLLQRVSQDDTNTVDFIFISQPSKSDSDSGI
SDPQHLFSHHACHCSILGKTPITWLVDGPRTLHHNFNASFCEVNLKMTIYNSSDAAMFVR
VNTFDSPSSSGQTSEATSPRSAVPSGNQAGWHDVPVLTDIKVTSQLPLNQVKRSSLLESV
SPFIWSGSSASSVRLQPMSTTDIAMKVCLFSPGTYDLSNYALNWKLLTISGQGNEGETRQ
SSGSCPGYPYFLTVLQAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005768
(678 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260655 - symbol:l(3)76BDm "lethal (3) 76BDm" spec... 217 8.2e-14 1
UNIPROTKB|Q9Y2L5 - symbol:TRAPPC8 "Trafficking protein pa... 105 4.5e-07 3
>FB|FBgn0260655 [details] [associations]
symbol:l(3)76BDm "lethal (3) 76BDm" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR011990 EMBL:AE014296
Gene3D:1.25.40.10 InterPro:IPR013935 Pfam:PF08626
InterPro:IPR024420 PANTHER:PTHR12975 Pfam:PF12739
GeneTree:ENSGT00390000000568 FlyBase:FBgn0260655 EMBL:BT133116
RefSeq:NP_649135.2 IntAct:Q9VW22 MINT:MINT-311414
EnsemblMetazoa:FBtr0074966 EnsemblMetazoa:FBtr0333896 GeneID:40140
KEGG:dme:Dmel_CG8793 UCSC:CG8793-RA InParanoid:Q9VW22 OMA:LEQASYC
GenomeRNAi:40140 NextBio:817202 Uniprot:Q9VW22
Length = 1319
Score = 217 (81.4 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 90/380 (23%), Positives = 169/380 (44%)
Query: 26 ESNICVAGEPVKVDIEFKNPLQIPISISNISLICELSTRSDEMESDSNSSTTELQNDEES 85
E+ + V GEP+++ + N +Q I++S I L+ +L+ +DE+ S N+ T E +D +
Sbjct: 747 ETPVAVQGEPIELAVTLSNSVQCRIALSEIDLLWKLTLDNDEVLS--NACTYEESSDSAN 804
Query: 86 KLLTTTGEMNSDTSSFTLSEVDISLGGAETILVQLMVTPKVEGILKIVGVRWRLSG---- 141
K+ S +S L+E ET+ +L TPK+ G L I+GV R++
Sbjct: 805 KIAVGAAIKTSCMASIKLAEQ-----AEETLHFKL--TPKLTGRLSILGVVCRVAAGADP 857
Query: 142 --SLVGVYNFESNLXXXXXXXXXXXXXSSPSNDLKFIVIKSLPKLEGLIHPLPERAYAGD 199
SL+G FE+ N L ++ LP + P+P R AG+
Sbjct: 858 AASLLGTLQFETQKIRPHNAKQSSQTVMD--NRLTIKLVPQLPAMNVSFTPVPNRLLAGE 915
Query: 200 LRHLVLELKNQSDFSVKNLKMKVSHPRFLSI-GNRDDMTKEFPACLQKMTNAEQSVAGGN 258
+ + + L+N ++ + + +PR +S+ M + L+ ++N ++ V
Sbjct: 916 IVPVHVTLRNMGIAPIEEIYLGCDNPRCVSLLDQHSQMPLAMMSSLRNLSN-DKLVKDKE 974
Query: 259 FN-KMPQAVFSFPEGISIQGETPLLWPLWYRAA-VPGKISLSITIYYEMGDVS-SVIKYR 315
+ + + P ++ + LW +A G +L + YY + V+ S IKYR
Sbjct: 975 IRGQRVYRLLNRPGLAALDAQQVQTISLWVQAPHQAGPFTLRLLFYYSLPTVANSPIKYR 1034
Query: 316 LLRMHYNLEVLPSLNVSFQISPWSSRLQQYLVRMDVVNQTSSENFQIHQLSSVG-HQWEI 374
L+R + L+V L ++ + + ++V NQ + E +++ ++S+ + E
Sbjct: 1035 LVRHIWQLQVESCLQADSTCVVSNAVTNELGLDVNVRNQHAVEGTEVY-INSISLYSTEF 1093
Query: 375 SLLQPFDSIFPSESLFAGQA 394
L I S + GQA
Sbjct: 1094 KLNPDRLHIMNSMGVSPGQA 1113
>UNIPROTKB|Q9Y2L5 [details] [associations]
symbol:TRAPPC8 "Trafficking protein particle complex
subunit 8" species:9606 "Homo sapiens" [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=NAS] [GO:0005801 "cis-Golgi network"
evidence=NAS] InterPro:IPR011990 GO:GO:0005794 Gene3D:1.25.40.10
GO:GO:0006888 GO:GO:0005801 EMBL:AC022960 EMBL:AB023229
EMBL:AL136749 EMBL:AC009831 EMBL:BC127109 EMBL:BC127110
EMBL:AK001662 IPI:IPI00007253 IPI:IPI00216617 RefSeq:NP_055754.2
UniGene:Hs.202001 ProteinModelPortal:Q9Y2L5 SMR:Q9Y2L5
DIP:DIP-48280N IntAct:Q9Y2L5 STRING:Q9Y2L5 PhosphoSite:Q9Y2L5
DMDM:296452850 PaxDb:Q9Y2L5 PRIDE:Q9Y2L5 DNASU:22878
Ensembl:ENST00000283351 GeneID:22878 KEGG:hsa:22878 UCSC:uc002kxb.4
CTD:22878 GeneCards:GC18M029409 H-InvDB:HIX0014382
H-InvDB:HIX0039822 HGNC:HGNC:29169 HPA:HPA041107 MIM:614136
neXtProt:NX_Q9Y2L5 PharmGKB:PA165429149 eggNOG:NOG330568
HOGENOM:HOG000046881 HOVERGEN:HBG036226 InParanoid:Q9Y2L5
OMA:LPGCHTG OrthoDB:EOG4RXXZB PhylomeDB:Q9Y2L5 ChiTaRS:TRAPPC8
GenomeRNAi:22878 NextBio:43445 PMAP-CutDB:Q9Y2L5 Bgee:Q9Y2L5
CleanEx:HS_KIAA1012 Genevestigator:Q9Y2L5
GermOnline:ENSG00000153339 InterPro:IPR024420 PANTHER:PTHR12975
Pfam:PF12739 Uniprot:Q9Y2L5
Length = 1435
Score = 105 (42.0 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 44/216 (20%), Positives = 86/216 (39%)
Query: 29 ICVAGEPVKVDIEFKNPLQIPISISNISLICELSTRSDEMESDSNSSTTELQNDEESKL- 87
+ V EP+ V++ F+NPL++ + ++++SL+ + + + N +L E +
Sbjct: 748 LAVVEEPITVEVAFRNPLKVLLLLTDLSLLWKFHPK--DFSGKDNEEVKQLVTSEPEMIG 805
Query: 88 LTTTGE--MNSDTSSFTLSEV------DISLGGAETILVQLMVTPKVEGILKIVGV---R 136
E +N + S ++ ++ + G L + + V+GI + G +
Sbjct: 806 AEVISEFLINGEESKVARLKLFPHHIGELHILGVVYNLGTIQGSMTVDGIGALPGCHTGK 865
Query: 137 WRLSGSLVGVYNFE-SNLXXXXXXXXXXXXXSSPSNDLKFIVIKSLPKLEGLIHPLPERA 195
+ LS S+ G + E P L I+ + +P LE P
Sbjct: 866 YSLSMSVRGKQDLEIQGPRLNNTKEEKTSVKYGPDRRLDPIITEEMPLLEVFFIHFPTGL 925
Query: 196 YAGDLRHLVLELKNQSDFSVKNLKMKVSHPRFLSIG 231
G++R +E N S + LK+ P F + G
Sbjct: 926 LCGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFTFG 961
Score = 86 (35.3 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 38/151 (25%), Positives = 62/151 (41%)
Query: 236 MTKEFPACLQKMTNAEQSVAGGNFNKMPQAV-FSFPEGISIQGETPLLWPLWYRAA-VPG 293
+T C +++A G P+ + P+ + + G + L P+W R G
Sbjct: 985 VTDATSVCTALISSASSVDFGIGTGSQPEVIPVPLPDTVLLPGASVQL-PMWLRGPDEEG 1043
Query: 294 KISLSITIYYEMGDVSSVIKYRLLRMHYNLEVLPSLNVSFQISPWSS------RLQQYLV 347
++ YYE I++R+LR + SLNV + +S R LV
Sbjct: 1044 VHEINFLFYYESVKKQPKIRHRILRHTAIICTSRSLNVRATVCRSNSLENEEGRGGNMLV 1103
Query: 348 RMDVVNQTSSE----NFQIHQLSSVGHQWEI 374
+DV N +SE F I Q+SS W++
Sbjct: 1104 FVDVENTNTSEAGVKEFHIVQVSSSSKHWKL 1134
Score = 63 (27.2 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 25/94 (26%), Positives = 38/94 (40%)
Query: 573 DVPVLTDIKVTSQLPLNQVKRSSLLESVSPFIWSGSSASSVRLQPMSTTDIAMKVCLFSP 632
DV V+ D++ + P LE F W G + ++L+ + +K C
Sbjct: 1345 DVDVIVDLRHKTTSP-------EALEIHGSFTWLGQTQYKLQLKSQEIHSLQLKACFVHT 1397
Query: 633 GTYDLSNYALNWKLLTISGQGNEGETRQSSGSCP 666
G Y+L + KL S Q ET Q + S P
Sbjct: 1398 GVYNLGTPRVFAKL---SDQVTVFETSQQN-SMP 1427
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 678 653 0.00096 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 623 (66 KB)
Total size of DFA: 345 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.42u 0.09s 57.51t Elapsed: 00:00:03
Total cpu time: 57.42u 0.09s 57.51t Elapsed: 00:00:03
Start: Fri May 10 04:08:46 2013 End: Fri May 10 04:08:49 2013