Query 005770
Match_columns 678
No_of_seqs 693 out of 4760
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 07:00:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005770.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005770hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ihg_A RDME; flavoenzyme, anth 100.0 7.4E-44 2.5E-48 400.0 32.6 424 76-552 4-456 (535)
2 2qa2_A CABE, polyketide oxygen 100.0 1.7E-43 5.7E-48 392.1 32.1 410 75-551 10-431 (499)
3 2qa1_A PGAE, polyketide oxygen 100.0 2.1E-43 7.1E-48 391.4 32.4 411 74-551 8-430 (500)
4 3rp8_A Flavoprotein monooxygen 100.0 2.5E-42 8.5E-47 374.5 37.3 369 73-467 19-388 (407)
5 2r0c_A REBC; flavin adenine di 100.0 3.6E-42 1.2E-46 386.4 36.0 430 75-551 24-482 (549)
6 3fmw_A Oxygenase; mithramycin, 100.0 3.4E-42 1.2E-46 386.6 28.9 419 76-552 48-483 (570)
7 1pn0_A Phenol 2-monooxygenase; 100.0 2.4E-41 8.1E-46 386.4 34.2 428 76-552 7-519 (665)
8 4hb9_A Similarities with proba 100.0 2.2E-41 7.6E-46 367.1 31.9 347 78-437 2-379 (412)
9 2dkh_A 3-hydroxybenzoate hydro 100.0 5.7E-40 2E-44 374.6 30.5 424 76-553 31-508 (639)
10 2vou_A 2,6-dihydroxypyridine h 100.0 1.7E-37 5.9E-42 335.3 32.8 330 75-438 3-364 (397)
11 2xdo_A TETX2 protein; tetracyc 100.0 4.3E-37 1.5E-41 332.3 34.3 340 72-436 21-379 (398)
12 3c96_A Flavin-containing monoo 100.0 2.7E-36 9.1E-41 327.4 35.0 336 75-436 2-366 (410)
13 2x3n_A Probable FAD-dependent 100.0 7.7E-37 2.6E-41 330.5 26.2 341 76-439 5-356 (399)
14 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.4E-36 4.8E-41 326.1 23.0 324 75-435 9-343 (379)
15 1k0i_A P-hydroxybenzoate hydro 100.0 2.6E-35 8.9E-40 317.9 22.1 334 77-438 2-346 (394)
16 3i3l_A Alkylhalidase CMLS; fla 100.0 1.2E-31 4.1E-36 301.3 31.9 347 73-437 19-376 (591)
17 3e1t_A Halogenase; flavoprotei 100.0 2.8E-31 9.4E-36 295.9 34.3 343 75-436 5-363 (512)
18 3oz2_A Digeranylgeranylglycero 100.0 4.1E-31 1.4E-35 284.5 31.2 326 75-429 2-337 (397)
19 3c4a_A Probable tryptophan hyd 100.0 6.4E-32 2.2E-36 289.9 16.6 337 78-466 1-353 (381)
20 3atr_A Conserved archaeal prot 100.0 4.5E-31 1.6E-35 289.8 23.1 331 76-439 5-352 (453)
21 3cgv_A Geranylgeranyl reductas 100.0 2.9E-29 9.8E-34 270.6 30.8 333 75-437 2-345 (397)
22 3nix_A Flavoprotein/dehydrogen 100.0 2.7E-29 9.2E-34 273.2 29.9 333 76-432 4-349 (421)
23 2pyx_A Tryptophan halogenase; 100.0 3.9E-27 1.3E-31 263.2 30.5 328 76-435 6-408 (526)
24 2gmh_A Electron transfer flavo 100.0 8E-27 2.7E-31 262.9 30.8 328 76-427 34-409 (584)
25 2weu_A Tryptophan 5-halogenase 99.9 1.5E-25 5.2E-30 249.8 30.6 324 77-436 2-401 (511)
26 3ihm_A Styrene monooxygenase A 99.9 4.1E-26 1.4E-30 248.4 22.7 325 76-435 21-371 (430)
27 2aqj_A Tryptophan halogenase, 99.9 1.6E-25 5.5E-30 251.0 27.1 324 76-434 4-391 (538)
28 2e4g_A Tryptophan halogenase; 99.9 3E-25 1E-29 249.1 28.5 327 76-436 24-424 (550)
29 2bry_A NEDD9 interacting prote 99.9 6.6E-22 2.2E-26 218.8 17.1 137 75-250 90-236 (497)
30 4h87_A Kanadaptin; FHA domain 99.8 3.2E-19 1.1E-23 158.1 12.3 99 543-656 20-129 (130)
31 1uht_A Expressed protein; FHA 99.7 1.1E-17 3.7E-22 146.8 11.9 100 543-656 12-112 (118)
32 3va4_A Mediator of DNA damage 99.7 1.9E-17 6.6E-22 146.9 11.1 82 567-661 44-129 (132)
33 1yvv_A Amine oxidase, flavin-c 99.7 1.6E-16 5.4E-21 166.7 19.8 155 77-249 2-167 (336)
34 3gqs_A Adenylate cyclase-like 99.7 3.4E-17 1.1E-21 140.6 11.3 98 542-658 3-102 (106)
35 2xt9_B Putative signal transdu 99.7 4.2E-17 1.4E-21 142.1 11.2 95 543-658 11-105 (115)
36 2pie_A E3 ubiquitin-protein li 99.7 9E-17 3.1E-21 144.7 12.3 102 541-658 7-117 (138)
37 3po8_A RV0020C protein, putati 99.7 8.8E-17 3E-21 136.5 10.8 76 567-656 22-97 (100)
38 3els_A PRE-mRNA leakage protei 99.7 7.4E-17 2.5E-21 147.6 10.1 102 543-649 31-146 (158)
39 2kb3_A Oxoglutarate dehydrogen 99.7 9.4E-17 3.2E-21 144.6 10.6 96 541-657 44-139 (143)
40 1mzk_A Kinase associated prote 99.7 2.5E-16 8.5E-21 142.0 13.1 104 544-658 8-122 (139)
41 2jpe_A Nuclear inhibitor of pr 99.7 1.3E-17 4.5E-22 150.6 4.7 100 543-656 34-135 (140)
42 2jqj_A DNA damage response pro 99.7 1E-16 3.5E-21 146.7 10.6 97 567-676 37-141 (151)
43 2kfu_A RV1827 PThr 22; FHA dom 99.7 1.6E-16 5.5E-21 145.6 10.6 95 543-658 55-149 (162)
44 1lgp_A Cell cycle checkpoint p 99.7 1.8E-16 6.1E-21 138.6 9.4 97 546-658 7-111 (116)
45 3elv_A PRE-mRNA leakage protei 99.7 2.3E-16 7.8E-21 148.1 10.4 102 543-649 78-193 (205)
46 1r21_A Antigen KI-67; beta san 99.7 1.6E-16 5.6E-21 141.3 8.7 78 567-659 32-109 (128)
47 1gxc_A CHK2, CDS1, serine/thre 99.7 5.4E-16 1.9E-20 141.4 12.4 81 567-658 47-141 (149)
48 2csw_A Ubiquitin ligase protei 99.7 1.5E-16 5.1E-21 144.4 8.2 90 543-648 17-111 (145)
49 1dmz_A Protein (protein kinase 99.6 4.4E-16 1.5E-20 143.1 10.4 80 567-658 26-125 (158)
50 3oun_A Putative uncharacterize 99.6 5.5E-16 1.9E-20 140.4 9.2 70 567-649 84-153 (157)
51 1g3g_A Protien kinase SPK1; FH 99.6 8E-16 2.8E-20 142.4 9.7 103 544-658 34-148 (164)
52 3hx1_A SLR1951 protein; P74513 99.6 1.2E-15 3.9E-20 135.7 9.8 78 567-657 29-116 (131)
53 1wln_A Afadin; beta sandwich, 99.6 2.9E-15 1E-19 131.4 11.4 78 567-658 35-114 (120)
54 1g6g_A Protein kinase RAD53; b 99.6 1.8E-15 6E-20 134.2 9.9 81 567-658 35-120 (127)
55 1qu5_A Protein kinase SPK1; FH 99.6 9.5E-16 3.2E-20 143.6 8.0 80 567-658 50-149 (182)
56 3fm8_A Kinesin-like protein KI 99.5 7.4E-14 2.5E-18 121.7 11.8 96 544-657 27-123 (124)
57 4ejq_A Kinesin-like protein KI 99.5 1.1E-13 3.8E-18 126.4 11.4 81 567-658 60-144 (154)
58 2ff4_A Probable regulatory pro 99.5 7E-14 2.4E-18 149.2 10.1 87 557-662 299-385 (388)
59 2gag_B Heterotetrameric sarcos 99.5 2.4E-13 8.3E-18 146.2 13.8 64 186-250 170-237 (405)
60 1ryi_A Glycine oxidase; flavop 99.4 1.1E-12 3.8E-17 139.9 14.6 65 185-250 159-226 (382)
61 3huf_A DNA repair and telomere 99.4 9.3E-13 3.2E-17 130.2 11.1 99 544-656 2-112 (325)
62 3kkj_A Amine oxidase, flavin-c 99.4 1.7E-12 6E-17 130.8 11.8 36 77-112 2-37 (336)
63 1y56_B Sarcosine oxidase; dehy 99.3 7E-12 2.4E-16 133.7 14.7 64 186-250 145-212 (382)
64 3ps9_A TRNA 5-methylaminomethy 99.3 4.1E-11 1.4E-15 137.6 19.2 62 184-245 411-474 (676)
65 3pvc_A TRNA 5-methylaminomethy 99.3 4.1E-11 1.4E-15 137.8 17.3 62 184-245 406-470 (689)
66 2gf3_A MSOX, monomeric sarcosi 99.2 1.6E-10 5.5E-15 123.4 19.0 60 185-245 145-206 (389)
67 4a0e_A YSCD, type III secretio 99.2 2.7E-11 9.1E-16 103.5 9.7 97 542-660 3-100 (123)
68 3dme_A Conserved exported prot 99.2 6E-10 2.1E-14 117.7 22.4 66 185-250 145-216 (369)
69 2qcu_A Aerobic glycerol-3-phos 99.2 6.8E-10 2.3E-14 122.8 22.3 65 185-249 144-216 (501)
70 3nyc_A D-arginine dehydrogenas 99.2 1.4E-10 4.9E-15 123.3 15.3 65 185-250 149-216 (381)
71 3uv0_A Mutator 2, isoform B; F 99.2 2E-11 6.9E-16 98.7 6.3 74 566-655 19-99 (102)
72 3v76_A Flavoprotein; structura 99.2 1.2E-10 4E-15 125.3 13.5 147 74-245 24-188 (417)
73 2oln_A NIKD protein; flavoprot 99.2 3.4E-10 1.2E-14 121.3 16.4 65 185-250 148-215 (397)
74 1rp0_A ARA6, thiazole biosynth 99.1 5.3E-10 1.8E-14 114.0 15.6 138 76-250 38-197 (284)
75 3kt9_A Aprataxin; FHA domain, 99.1 3.9E-10 1.3E-14 93.7 11.1 93 544-656 5-99 (102)
76 2i0z_A NAD(FAD)-utilizing dehy 99.1 3.7E-11 1.3E-15 131.0 6.2 161 76-251 25-209 (447)
77 3jsk_A Cypbp37 protein; octame 99.1 6.4E-10 2.2E-14 114.8 15.0 138 76-250 78-257 (344)
78 3nlc_A Uncharacterized protein 99.1 2.4E-10 8E-15 126.5 11.4 58 188-245 218-278 (549)
79 3dje_A Fructosyl amine: oxygen 99.1 6.7E-10 2.3E-14 120.7 14.9 61 185-245 156-222 (438)
80 2uzz_A N-methyl-L-tryptophan o 99.1 7.7E-10 2.6E-14 117.3 12.7 60 185-245 144-205 (372)
81 1qo8_A Flavocytochrome C3 fuma 99.0 1.8E-09 6.3E-14 121.1 16.3 63 188-250 248-318 (566)
82 3ces_A MNMG, tRNA uridine 5-ca 99.0 1.4E-09 4.9E-14 121.2 14.7 154 76-249 27-186 (651)
83 3k30_A Histamine dehydrogenase 99.0 1.1E-10 3.8E-15 134.1 6.1 89 20-110 331-424 (690)
84 2cul_A Glucose-inhibited divis 99.0 2.7E-09 9.3E-14 105.3 14.5 125 76-250 2-131 (232)
85 3i6d_A Protoporphyrinogen oxid 99.0 2.7E-09 9.2E-14 116.8 16.0 56 191-246 236-291 (470)
86 3da1_A Glycerol-3-phosphate de 99.0 4.9E-09 1.7E-13 117.2 17.5 67 185-251 165-240 (561)
87 2gqf_A Hypothetical protein HI 99.0 1.3E-09 4.3E-14 116.8 11.9 146 75-245 2-169 (401)
88 3c4n_A Uncharacterized protein 99.0 1.2E-09 4E-14 117.5 10.8 65 185-250 167-244 (405)
89 3cp8_A TRNA uridine 5-carboxym 99.0 3.9E-09 1.3E-13 117.7 15.0 153 75-247 19-177 (641)
90 3ab1_A Ferredoxin--NADP reduct 99.0 2E-09 7E-14 113.6 12.2 123 75-250 12-137 (360)
91 1y0p_A Fumarate reductase flav 99.0 8.9E-09 3E-13 115.7 17.9 62 189-250 254-323 (571)
92 2zxi_A TRNA uridine 5-carboxym 99.0 4.1E-09 1.4E-13 117.1 14.7 154 76-249 26-185 (637)
93 2ywl_A Thioredoxin reductase r 99.0 2.7E-09 9.2E-14 100.7 11.5 113 78-250 2-116 (180)
94 4a9w_A Monooxygenase; baeyer-v 99.0 1.6E-09 5.6E-14 113.7 10.6 129 76-245 2-133 (357)
95 2zbw_A Thioredoxin reductase; 98.9 2.8E-09 9.6E-14 111.2 12.0 123 75-250 3-127 (335)
96 2brf_A Bifunctional polynucleo 98.9 6.4E-09 2.2E-13 87.2 11.5 95 544-657 10-106 (110)
97 2gv8_A Monooxygenase; FMO, FAD 98.9 1E-09 3.5E-14 119.5 8.4 62 186-247 111-180 (447)
98 1ps9_A 2,4-dienoyl-COA reducta 98.9 1.1E-09 3.7E-14 125.5 6.8 89 20-110 317-406 (671)
99 3axb_A Putative oxidoreductase 98.9 9.2E-09 3.2E-13 112.0 13.2 66 184-250 175-261 (448)
100 1d4d_A Flavocytochrome C fumar 98.9 7.5E-08 2.6E-12 108.0 20.6 62 189-250 254-323 (572)
101 1o94_A Tmadh, trimethylamine d 98.9 8.9E-10 3E-14 127.1 5.0 90 20-111 328-423 (729)
102 2gjc_A Thiazole biosynthetic e 98.9 2.4E-08 8.3E-13 102.5 14.8 138 76-250 64-245 (326)
103 3fbs_A Oxidoreductase; structu 98.9 9.5E-09 3.2E-13 104.9 11.8 112 77-247 2-115 (297)
104 4egx_A Kinesin-like protein KI 98.9 1.6E-08 5.6E-13 94.6 12.2 80 567-658 90-174 (184)
105 4dgk_A Phytoene dehydrogenase; 98.8 2.9E-07 1E-11 101.5 23.8 59 192-250 223-284 (501)
106 1w4x_A Phenylacetone monooxyge 98.8 5.1E-09 1.8E-13 116.8 9.6 138 75-247 14-157 (542)
107 3gwf_A Cyclohexanone monooxyge 98.8 7.8E-09 2.7E-13 114.9 10.0 137 76-247 7-150 (540)
108 1yj5_C 5' polynucleotide kinas 98.8 3.4E-08 1.2E-12 85.7 11.3 95 544-657 10-106 (143)
109 1kf6_A Fumarate reductase flav 98.8 5.5E-08 1.9E-12 109.4 16.2 61 190-250 134-203 (602)
110 3qj4_A Renalase; FAD/NAD(P)-bi 98.8 3.5E-08 1.2E-12 103.3 13.7 144 78-242 2-163 (342)
111 3i6u_A CDS1, serine/threonine- 98.8 9.8E-09 3.4E-13 110.8 9.7 81 567-658 27-121 (419)
112 3itj_A Thioredoxin reductase 1 98.8 8.4E-09 2.9E-13 107.5 8.8 121 74-246 19-144 (338)
113 2q0l_A TRXR, thioredoxin reduc 98.8 3.2E-08 1.1E-12 101.9 12.8 113 78-247 2-117 (311)
114 3f8d_A Thioredoxin reductase ( 98.8 2.8E-08 9.4E-13 102.7 11.7 111 76-245 14-126 (323)
115 1pj5_A N,N-dimethylglycine oxi 98.8 3.9E-08 1.3E-12 115.4 14.0 61 185-246 146-209 (830)
116 4ap3_A Steroid monooxygenase; 98.8 1.6E-08 5.3E-13 112.7 10.0 137 75-246 19-161 (549)
117 3lzw_A Ferredoxin--NADP reduct 98.8 2E-08 6.7E-13 104.4 10.2 116 76-245 6-124 (332)
118 4fk1_A Putative thioredoxin re 98.7 3.6E-08 1.2E-12 101.4 11.8 36 74-109 3-38 (304)
119 3nrn_A Uncharacterized protein 98.7 1.8E-07 6E-12 100.9 17.6 54 191-246 190-245 (421)
120 1ujx_A Polynucleotide kinase 3 98.7 2.4E-08 8.1E-13 84.8 8.3 96 544-658 17-114 (119)
121 1c0p_A D-amino acid oxidase; a 98.7 2E-07 7E-12 98.2 17.5 37 75-111 4-40 (363)
122 2xve_A Flavin-containing monoo 98.7 1.7E-08 5.7E-13 110.4 9.2 151 78-248 3-170 (464)
123 3lov_A Protoporphyrinogen oxid 98.7 5.1E-08 1.8E-12 106.9 12.7 54 191-245 237-290 (475)
124 1vdc_A NTR, NADPH dependent th 98.7 1.2E-08 4.1E-13 106.3 6.9 119 75-246 6-126 (333)
125 3cty_A Thioredoxin reductase; 98.7 4.8E-08 1.6E-12 101.1 11.3 113 75-246 14-128 (319)
126 3uox_A Otemo; baeyer-villiger 98.7 2.9E-08 9.8E-13 110.5 9.4 138 75-247 7-150 (545)
127 2q7v_A Thioredoxin reductase; 98.7 1E-07 3.4E-12 98.9 12.7 115 75-246 6-125 (325)
128 3s5w_A L-ornithine 5-monooxyge 98.7 9.2E-08 3.2E-12 104.5 12.8 140 76-244 29-192 (463)
129 3ka7_A Oxidoreductase; structu 98.7 3.2E-07 1.1E-11 98.9 16.7 57 190-247 196-255 (425)
130 4at0_A 3-ketosteroid-delta4-5a 98.6 5.6E-07 1.9E-11 99.5 17.0 38 75-112 39-76 (510)
131 1chu_A Protein (L-aspartate ox 98.6 1E-07 3.5E-12 105.9 11.0 35 76-111 7-41 (540)
132 1fl2_A Alkyl hydroperoxide red 98.6 1.1E-07 3.6E-12 97.9 10.4 112 77-246 1-117 (310)
133 2a87_A TRXR, TR, thioredoxin r 98.6 7.8E-08 2.7E-12 100.3 9.3 114 75-246 12-128 (335)
134 3d1c_A Flavin-containing putat 98.6 1.5E-07 5E-12 99.4 11.3 135 76-245 3-144 (369)
135 1trb_A Thioredoxin reductase; 98.6 9.5E-08 3.2E-12 98.7 9.1 113 76-246 4-118 (320)
136 2e5v_A L-aspartate oxidase; ar 98.6 5.1E-07 1.7E-11 98.7 15.4 60 189-249 118-181 (472)
137 2h88_A Succinate dehydrogenase 98.5 1.1E-06 3.9E-11 98.7 17.2 57 190-246 155-219 (621)
138 2wdq_A Succinate dehydrogenase 98.5 1.6E-06 5.6E-11 97.2 17.4 37 76-112 6-42 (588)
139 2a8x_A Dihydrolipoyl dehydroge 98.5 3.4E-07 1.2E-11 100.0 11.5 141 77-248 3-150 (464)
140 4a5l_A Thioredoxin reductase; 98.5 5.3E-07 1.8E-11 92.7 11.9 117 76-244 3-121 (314)
141 2rgh_A Alpha-glycerophosphate 98.5 2.2E-06 7.4E-11 96.0 17.2 65 186-250 184-257 (571)
142 1v59_A Dihydrolipoamide dehydr 98.5 3.7E-07 1.3E-11 100.1 10.8 35 76-110 4-38 (478)
143 1hyu_A AHPF, alkyl hydroperoxi 98.5 5.1E-07 1.8E-11 100.0 11.8 113 75-245 210-327 (521)
144 2bs2_A Quinol-fumarate reducta 98.4 2.2E-06 7.6E-11 97.1 15.4 37 76-112 4-40 (660)
145 2ivd_A PPO, PPOX, protoporphyr 98.4 7.7E-07 2.6E-11 97.5 11.2 53 192-245 240-295 (478)
146 3o0h_A Glutathione reductase; 98.4 8.1E-07 2.8E-11 97.5 10.7 45 202-246 246-290 (484)
147 3g3e_A D-amino-acid oxidase; F 98.4 1.6E-07 5.5E-12 98.6 4.8 34 78-111 1-40 (351)
148 1ojt_A Surface protein; redox- 98.4 1.1E-06 3.8E-11 96.4 10.8 35 76-110 5-39 (482)
149 3k7m_X 6-hydroxy-L-nicotine ox 98.4 2.8E-07 9.6E-12 99.6 5.9 40 204-243 219-258 (431)
150 1dxl_A Dihydrolipoamide dehydr 98.3 1.9E-06 6.5E-11 94.2 12.1 36 75-110 4-39 (470)
151 1wv3_A Similar to DNA segregat 98.3 4E-07 1.4E-11 89.2 5.7 67 567-649 91-163 (238)
152 1s3e_A Amine oxidase [flavin-c 98.3 5.2E-06 1.8E-10 92.0 14.7 53 192-245 217-269 (520)
153 4gut_A Lysine-specific histone 98.3 4.1E-06 1.4E-10 96.5 13.8 42 202-243 543-584 (776)
154 3cgb_A Pyridine nucleotide-dis 98.3 2.3E-06 7.9E-11 93.8 10.3 130 59-244 17-152 (480)
155 3ics_A Coenzyme A-disulfide re 98.2 3.1E-06 1.1E-10 95.3 11.5 132 57-244 15-152 (588)
156 1jnr_A Adenylylsulfate reducta 98.2 8.3E-06 2.9E-10 92.5 14.1 36 76-111 21-60 (643)
157 3gyx_A Adenylylsulfate reducta 98.2 1E-05 3.4E-10 91.7 14.3 36 76-111 21-62 (662)
158 3r9u_A Thioredoxin reductase; 98.2 4E-06 1.4E-10 86.0 10.1 110 76-243 3-117 (315)
159 1q1r_A Putidaredoxin reductase 98.2 3.1E-06 1.1E-10 91.4 9.0 112 76-246 3-116 (431)
160 1ebd_A E3BD, dihydrolipoamide 98.2 3.5E-06 1.2E-10 91.7 9.2 33 77-109 3-35 (455)
161 3qfa_A Thioredoxin reductase 1 98.1 1.4E-05 4.7E-10 88.5 13.3 39 72-110 27-65 (519)
162 3klj_A NAD(FAD)-dependent dehy 98.1 1E-05 3.4E-10 85.9 11.4 108 75-242 7-114 (385)
163 3urh_A Dihydrolipoyl dehydroge 98.1 1.9E-05 6.4E-10 86.8 13.1 38 73-110 21-58 (491)
164 4gcm_A TRXR, thioredoxin reduc 98.1 2.5E-06 8.4E-11 87.8 5.3 34 76-109 5-38 (312)
165 1zmd_A Dihydrolipoyl dehydroge 98.0 2E-05 6.8E-10 86.2 12.2 35 76-110 5-39 (474)
166 3iwa_A FAD-dependent pyridine 98.0 9.7E-06 3.3E-10 88.6 9.5 35 77-111 3-39 (472)
167 2bc0_A NADH oxidase; flavoprot 98.0 1.3E-05 4.3E-10 88.1 10.2 35 76-110 34-71 (490)
168 4b63_A L-ornithine N5 monooxyg 98.0 3E-05 1E-09 85.3 13.1 57 186-242 141-212 (501)
169 2yqu_A 2-oxoglutarate dehydrog 98.0 2.6E-05 8.9E-10 84.7 12.4 100 77-246 167-266 (455)
170 3l8k_A Dihydrolipoyl dehydroge 98.0 2.9E-05 1E-09 84.6 12.3 35 76-110 3-37 (466)
171 2v3a_A Rubredoxin reductase; a 98.0 3.3E-05 1.1E-09 81.9 12.3 101 77-246 145-245 (384)
172 3sx6_A Sulfide-quinone reducta 98.0 1.3E-05 4.6E-10 86.6 9.4 33 78-110 5-40 (437)
173 3oc4_A Oxidoreductase, pyridin 98.0 1.6E-05 5.5E-10 86.3 10.0 110 78-244 3-115 (452)
174 2yqu_A 2-oxoglutarate dehydrog 98.0 2.7E-05 9.1E-10 84.7 11.3 33 78-110 2-34 (455)
175 3kd9_A Coenzyme A disulfide re 98.0 2.1E-05 7.1E-10 85.4 10.2 35 76-110 2-38 (449)
176 2gqw_A Ferredoxin reductase; f 97.9 2E-05 6.7E-10 84.4 9.3 35 76-110 6-42 (408)
177 3fpz_A Thiazole biosynthetic e 97.9 5.1E-06 1.7E-10 86.1 4.5 37 75-111 63-101 (326)
178 1nhp_A NADH peroxidase; oxidor 97.9 2.9E-05 1E-09 84.1 10.5 33 78-110 1-35 (447)
179 3lxd_A FAD-dependent pyridine 97.9 1.7E-05 5.9E-10 85.0 8.5 35 76-110 8-44 (415)
180 2eq6_A Pyruvate dehydrogenase 97.9 5.5E-05 1.9E-09 82.4 12.3 100 77-246 169-273 (464)
181 3dgh_A TRXR-1, thioredoxin red 97.9 8.9E-05 3.1E-09 81.1 13.7 35 75-109 7-41 (483)
182 2cdu_A NADPH oxidase; flavoenz 97.9 4.2E-05 1.4E-09 83.0 10.9 33 78-110 1-35 (452)
183 3ef6_A Toluene 1,2-dioxygenase 97.9 5.8E-05 2E-09 80.8 11.8 34 78-111 3-38 (410)
184 3ntd_A FAD-dependent pyridine 97.9 2.8E-05 9.6E-10 87.0 9.6 34 78-111 2-37 (565)
185 3dgz_A Thioredoxin reductase 2 97.9 6.9E-05 2.3E-09 82.2 12.3 35 76-110 5-39 (488)
186 1ges_A Glutathione reductase; 97.8 7.3E-05 2.5E-09 81.0 12.1 100 77-246 167-267 (450)
187 3h28_A Sulfide-quinone reducta 97.8 7.1E-05 2.4E-09 80.6 11.7 34 78-111 3-38 (430)
188 2r9z_A Glutathione amide reduc 97.8 0.00011 3.7E-09 80.0 13.1 100 77-246 166-266 (463)
189 3ayj_A Pro-enzyme of L-phenyla 97.8 7.1E-06 2.4E-10 92.7 3.6 75 31-110 14-97 (721)
190 1m6i_A Programmed cell death p 97.8 1.2E-05 3.9E-10 88.5 5.1 38 74-111 8-47 (493)
191 3hyw_A Sulfide-quinone reducta 97.8 3.1E-05 1.1E-09 83.5 8.4 33 78-110 3-37 (430)
192 4b1b_A TRXR, thioredoxin reduc 97.8 0.00015 5.3E-09 80.0 13.9 36 76-111 41-76 (542)
193 1fec_A Trypanothione reductase 97.8 0.00012 4E-09 80.3 12.9 33 76-108 2-35 (490)
194 4gde_A UDP-galactopyranose mut 97.8 1.1E-05 3.7E-10 89.1 4.6 52 190-243 222-275 (513)
195 1xdi_A RV3303C-LPDA; reductase 97.8 6.7E-05 2.3E-09 82.5 10.2 34 77-110 2-38 (499)
196 1xhc_A NADH oxidase /nitrite r 97.8 0.00011 3.7E-09 77.4 11.3 33 77-110 8-40 (367)
197 3fg2_P Putative rubredoxin red 97.7 7E-05 2.4E-09 80.0 9.5 33 78-110 2-36 (404)
198 3h8l_A NADH oxidase; membrane 97.7 0.00014 4.7E-09 77.8 11.7 33 78-110 2-37 (409)
199 2bcg_G Secretory pathway GDP d 97.7 2.5E-05 8.7E-10 84.8 5.7 36 76-111 10-45 (453)
200 3s5w_A L-ornithine 5-monooxyge 97.7 0.00023 7.9E-09 77.3 13.2 141 77-244 227-377 (463)
201 1ebd_A E3BD, dihydrolipoamide 97.7 0.00019 6.4E-09 77.9 12.4 99 77-245 170-271 (455)
202 4g6h_A Rotenone-insensitive NA 97.7 5E-05 1.7E-09 83.4 7.8 36 75-110 40-75 (502)
203 2e1m_A L-glutamate oxidase; L- 97.7 3.2E-05 1.1E-09 81.2 5.7 35 75-109 42-76 (376)
204 2b9w_A Putative aminooxidase; 97.7 3.3E-05 1.1E-09 83.0 5.8 52 192-245 208-259 (424)
205 3dk9_A Grase, GR, glutathione 97.6 2.7E-05 9.1E-10 85.2 4.4 37 73-109 16-52 (478)
206 1v59_A Dihydrolipoamide dehydr 97.6 0.00026 9.1E-09 77.2 11.6 100 77-246 183-289 (478)
207 1rsg_A FMS1 protein; FAD bindi 97.6 3.5E-05 1.2E-09 85.1 4.6 55 190-244 202-257 (516)
208 2yg5_A Putrescine oxidase; oxi 97.6 3.3E-05 1.1E-09 83.7 4.2 56 191-249 216-272 (453)
209 2jae_A L-amino acid oxidase; o 97.6 5.4E-05 1.8E-09 83.0 5.9 53 191-243 240-295 (489)
210 2hqm_A GR, grase, glutathione 97.6 0.00034 1.2E-08 76.4 12.1 100 77-246 185-287 (479)
211 1v0j_A UDP-galactopyranose mut 97.6 5.1E-05 1.7E-09 80.9 5.3 35 76-110 6-41 (399)
212 1ojt_A Surface protein; redox- 97.6 0.00032 1.1E-08 76.7 11.7 100 77-246 185-288 (482)
213 3lad_A Dihydrolipoamide dehydr 97.6 4.9E-05 1.7E-09 83.0 5.2 35 76-110 2-36 (476)
214 3hdq_A UDP-galactopyranose mut 97.5 5.9E-05 2E-09 79.8 5.4 36 75-110 27-62 (397)
215 4dna_A Probable glutathione re 97.5 4.7E-05 1.6E-09 82.9 4.8 34 76-109 4-37 (463)
216 4eqs_A Coenzyme A disulfide re 97.5 0.00019 6.5E-09 77.4 9.4 32 79-110 2-35 (437)
217 1onf_A GR, grase, glutathione 97.5 0.00054 1.9E-08 75.2 13.0 100 77-246 176-277 (500)
218 3nks_A Protoporphyrinogen oxid 97.5 6.4E-05 2.2E-09 82.0 4.8 53 192-245 236-291 (477)
219 1nhp_A NADH peroxidase; oxidor 97.5 0.0005 1.7E-08 74.4 11.8 35 76-110 148-182 (447)
220 3lxd_A FAD-dependent pyridine 97.5 0.00076 2.6E-08 72.1 13.1 100 77-245 152-252 (415)
221 3fg2_P Putative rubredoxin red 97.5 0.00097 3.3E-08 71.0 13.8 99 77-244 142-241 (404)
222 1mo9_A ORF3; nucleotide bindin 97.5 0.0006 2E-08 75.3 12.4 99 78-246 215-318 (523)
223 3vrd_B FCCB subunit, flavocyto 97.4 0.00017 6E-09 76.7 7.7 33 78-110 3-37 (401)
224 2eq6_A Pyruvate dehydrogenase 97.4 7.1E-05 2.4E-09 81.5 4.7 36 75-110 4-39 (464)
225 2vdc_G Glutamate synthase [NAD 97.4 9.1E-05 3.1E-09 80.3 5.5 37 75-111 120-156 (456)
226 1xdi_A RV3303C-LPDA; reductase 97.4 0.00061 2.1E-08 74.8 12.2 100 77-246 182-281 (499)
227 2bi7_A UDP-galactopyranose mut 97.4 8.8E-05 3E-09 78.6 5.2 35 76-110 2-36 (384)
228 3ic9_A Dihydrolipoamide dehydr 97.4 5.4E-05 1.8E-09 83.1 3.7 34 77-110 8-41 (492)
229 2wpf_A Trypanothione reductase 97.4 0.00068 2.3E-08 74.3 12.5 100 77-246 191-294 (495)
230 1zk7_A HGII, reductase, mercur 97.4 0.0001 3.5E-09 80.3 5.7 34 76-109 3-36 (467)
231 1sez_A Protoporphyrinogen oxid 97.4 8.3E-05 2.8E-09 81.8 5.0 36 76-111 12-47 (504)
232 1fec_A Trypanothione reductase 97.4 0.00068 2.3E-08 74.2 12.2 99 77-245 187-289 (490)
233 1mo9_A ORF3; nucleotide bindin 97.4 0.00012 4E-09 81.0 6.2 37 74-110 40-76 (523)
234 3g5s_A Methylenetetrahydrofola 97.4 0.0001 3.5E-09 76.5 5.1 33 78-110 2-34 (443)
235 2vvm_A Monoamine oxidase N; FA 97.4 0.00013 4.3E-09 80.1 6.2 55 191-245 256-313 (495)
236 2hqm_A GR, grase, glutathione 97.4 8.6E-05 2.9E-09 81.2 4.8 35 75-109 9-43 (479)
237 2qae_A Lipoamide, dihydrolipoy 97.4 0.00079 2.7E-08 73.2 12.5 101 77-246 174-278 (468)
238 1q1r_A Putidaredoxin reductase 97.4 0.0011 3.6E-08 71.4 13.3 100 77-245 149-251 (431)
239 2r9z_A Glutathione amide reduc 97.4 0.0001 3.4E-09 80.3 5.2 34 76-109 3-36 (463)
240 3iwa_A FAD-dependent pyridine 97.4 0.001 3.6E-08 72.3 13.4 100 77-245 159-259 (472)
241 3ef6_A Toluene 1,2-dioxygenase 97.4 0.00046 1.6E-08 73.7 10.1 100 77-245 143-242 (410)
242 2a8x_A Dihydrolipoyl dehydroge 97.4 0.00091 3.1E-08 72.6 12.7 98 77-244 171-271 (464)
243 4dsg_A UDP-galactopyranose mut 97.4 0.00013 4.3E-09 79.9 5.7 56 189-246 215-272 (484)
244 1zmd_A Dihydrolipoyl dehydroge 97.4 0.00075 2.6E-08 73.5 11.9 100 77-245 178-283 (474)
245 1dxl_A Dihydrolipoamide dehydr 97.4 0.00046 1.6E-08 75.1 10.0 99 77-245 177-280 (470)
246 2qae_A Lipoamide, dihydrolipoy 97.4 0.00012 4E-09 79.9 5.2 34 77-110 2-35 (468)
247 3ic9_A Dihydrolipoamide dehydr 97.4 0.0012 4.3E-08 72.1 13.4 97 77-244 174-274 (492)
248 1ges_A Glutathione reductase; 97.4 0.0001 3.5E-09 79.9 4.5 34 76-109 3-36 (450)
249 3ntd_A FAD-dependent pyridine 97.4 0.0014 4.9E-08 73.0 14.0 34 77-110 151-184 (565)
250 1i8t_A UDP-galactopyranose mut 97.4 0.0001 3.5E-09 77.5 4.4 33 78-110 2-34 (367)
251 3pl8_A Pyranose 2-oxidase; sub 97.3 0.00011 3.9E-09 82.7 4.9 36 76-111 45-80 (623)
252 2iid_A L-amino-acid oxidase; f 97.3 0.00014 4.9E-09 79.8 5.6 52 191-243 242-297 (498)
253 1lvl_A Dihydrolipoamide dehydr 97.3 0.00051 1.7E-08 74.5 9.8 34 77-110 171-204 (458)
254 1onf_A GR, grase, glutathione 97.3 0.00015 5.1E-09 79.7 5.2 34 77-110 2-35 (500)
255 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00016 5.3E-09 78.2 5.0 37 74-110 17-53 (475)
256 1d5t_A Guanine nucleotide diss 97.3 0.00019 6.5E-09 77.3 5.6 37 75-111 4-40 (433)
257 3urh_A Dihydrolipoyl dehydroge 97.3 0.0014 4.7E-08 71.8 12.6 99 77-245 198-301 (491)
258 2gqw_A Ferredoxin reductase; f 97.3 0.0019 6.4E-08 68.9 13.1 96 77-245 145-240 (408)
259 1lvl_A Dihydrolipoamide dehydr 97.2 0.00016 5.5E-09 78.5 4.5 35 75-109 3-37 (458)
260 2cdu_A NADPH oxidase; flavoenz 97.2 0.0026 8.8E-08 68.8 14.1 100 77-245 149-248 (452)
261 3oc4_A Oxidoreductase, pyridin 97.2 0.0026 9E-08 68.7 13.9 98 77-244 147-244 (452)
262 3l8k_A Dihydrolipoyl dehydroge 97.2 0.0022 7.4E-08 69.7 12.9 97 77-245 172-273 (466)
263 3lad_A Dihydrolipoamide dehydr 97.2 0.0029 1E-07 68.8 14.0 98 77-244 180-280 (476)
264 1zk7_A HGII, reductase, mercur 97.2 0.0023 7.8E-08 69.5 12.9 98 77-246 176-273 (467)
265 2wpf_A Trypanothione reductase 97.2 0.00021 7.3E-09 78.4 4.7 33 76-108 6-39 (495)
266 1m6i_A Programmed cell death p 97.2 0.0026 8.8E-08 69.6 13.2 100 77-245 180-283 (493)
267 4b1b_A TRXR, thioredoxin reduc 97.1 0.0031 1.1E-07 69.6 13.5 100 77-247 223-322 (542)
268 2v3a_A Rubredoxin reductase; a 97.1 0.00032 1.1E-08 74.2 4.9 35 76-110 3-39 (384)
269 3cgb_A Pyridine nucleotide-dis 97.1 0.0026 8.9E-08 69.3 12.3 35 76-110 185-219 (480)
270 1kdg_A CDH, cellobiose dehydro 97.1 0.00032 1.1E-08 78.0 5.1 36 75-110 5-40 (546)
271 2bc0_A NADH oxidase; flavoprot 97.1 0.0034 1.2E-07 68.6 13.2 35 76-110 193-227 (490)
272 1lqt_A FPRA; NADP+ derivative, 97.1 0.00028 9.7E-09 76.4 4.5 36 76-111 2-44 (456)
273 2x8g_A Thioredoxin glutathione 97.1 0.00032 1.1E-08 78.9 5.0 35 75-109 105-139 (598)
274 4dna_A Probable glutathione re 97.0 0.0031 1.1E-07 68.4 12.0 98 77-245 170-269 (463)
275 2z3y_A Lysine-specific histone 97.0 0.00051 1.8E-08 78.1 5.9 37 75-111 105-141 (662)
276 2xag_A Lysine-specific histone 97.0 0.00061 2.1E-08 79.0 6.0 37 75-111 276-312 (852)
277 1xhc_A NADH oxidase /nitrite r 97.0 0.0018 6.3E-08 67.9 9.2 33 78-110 144-176 (367)
278 1b37_A Protein (polyamine oxid 97.0 0.00052 1.8E-08 74.8 5.1 55 191-245 207-271 (472)
279 1trb_A Thioredoxin reductase; 97.0 0.005 1.7E-07 62.8 12.4 34 77-110 145-178 (320)
280 3d1c_A Flavin-containing putat 97.0 0.0041 1.4E-07 64.9 11.8 106 77-244 166-272 (369)
281 3dk9_A Grase, GR, glutathione 96.9 0.0052 1.8E-07 66.9 12.5 98 77-244 187-293 (478)
282 3ics_A Coenzyme A-disulfide re 96.9 0.0045 1.5E-07 69.4 12.0 97 77-245 187-283 (588)
283 1cjc_A Protein (adrenodoxin re 96.9 0.00072 2.4E-08 73.3 5.1 36 76-111 5-42 (460)
284 3t37_A Probable dehydrogenase; 96.8 0.00062 2.1E-08 75.2 4.0 35 76-110 16-51 (526)
285 3kd9_A Coenzyme A disulfide re 96.8 0.0065 2.2E-07 65.5 12.0 34 77-110 148-181 (449)
286 1gte_A Dihydropyrimidine dehyd 96.8 0.00082 2.8E-08 80.3 5.2 35 76-110 186-221 (1025)
287 2gag_A Heterotetrameric sarcos 96.7 0.00085 2.9E-08 79.5 4.9 36 76-111 127-162 (965)
288 3itj_A Thioredoxin reductase 1 96.7 0.0041 1.4E-07 63.9 9.5 34 77-110 173-206 (338)
289 1y56_A Hypothetical protein PH 96.7 0.00043 1.5E-08 75.9 2.1 34 76-110 107-140 (493)
290 2q0l_A TRXR, thioredoxin reduc 96.7 0.0085 2.9E-07 60.8 11.8 34 77-110 143-176 (311)
291 1ju2_A HydroxynitrIle lyase; f 96.7 0.00058 2E-08 75.6 2.7 35 76-111 25-59 (536)
292 4eqs_A Coenzyme A disulfide re 96.7 0.0063 2.1E-07 65.4 10.6 34 77-110 147-180 (437)
293 3q9t_A Choline dehydrogenase a 96.6 0.001 3.5E-08 74.0 4.3 36 76-111 5-41 (577)
294 3dgh_A TRXR-1, thioredoxin red 96.6 0.011 3.7E-07 64.4 12.4 33 77-109 187-219 (483)
295 1coy_A Cholesterol oxidase; ox 96.6 0.0018 6E-08 71.2 5.5 36 75-110 9-44 (507)
296 1n4w_A CHOD, cholesterol oxida 96.5 0.0016 5.5E-08 71.4 4.9 35 76-110 4-38 (504)
297 3qvp_A Glucose oxidase; oxidor 96.4 0.0016 5.4E-08 72.5 4.2 35 76-110 18-53 (583)
298 2zbw_A Thioredoxin reductase; 96.4 0.0097 3.3E-07 61.1 9.9 34 77-110 152-185 (335)
299 3ab1_A Ferredoxin--NADP reduct 96.4 0.0087 3E-07 62.3 9.3 34 77-110 163-196 (360)
300 1gpe_A Protein (glucose oxidas 96.3 0.0026 8.7E-08 71.2 4.9 36 75-110 22-58 (587)
301 3dgz_A Thioredoxin reductase 2 96.3 0.024 8.3E-07 61.7 12.5 33 77-109 185-217 (488)
302 3fim_B ARYL-alcohol oxidase; A 96.2 0.0017 5.9E-08 72.0 2.6 35 77-111 2-37 (566)
303 3gwf_A Cyclohexanone monooxyge 96.1 0.032 1.1E-06 61.5 12.7 36 76-111 177-212 (540)
304 3f8d_A Thioredoxin reductase ( 96.1 0.015 5.1E-07 59.1 9.3 34 77-110 154-187 (323)
305 1fl2_A Alkyl hydroperoxide red 96.1 0.019 6.4E-07 58.2 10.0 34 77-110 144-177 (310)
306 3r9u_A Thioredoxin reductase; 96.1 0.032 1.1E-06 56.4 11.8 34 77-110 147-180 (315)
307 2q7v_A Thioredoxin reductase; 96.1 0.025 8.7E-07 57.7 11.1 34 77-110 152-185 (325)
308 2jbv_A Choline oxidase; alcoho 96.1 0.0033 1.1E-07 69.7 4.3 35 76-110 12-47 (546)
309 1vdc_A NTR, NADPH dependent th 96.0 0.026 9E-07 57.7 10.2 34 77-110 159-192 (333)
310 3fwz_A Inner membrane protein 95.9 0.0092 3.2E-07 52.9 5.6 36 76-111 6-41 (140)
311 2g1u_A Hypothetical protein TM 95.9 0.0097 3.3E-07 53.8 5.7 36 77-112 19-54 (155)
312 4g6h_A Rotenone-insensitive NA 95.8 0.027 9.2E-07 61.6 10.1 37 363-402 365-401 (502)
313 2x8g_A Thioredoxin glutathione 95.8 0.078 2.7E-06 59.3 13.8 32 78-109 287-318 (598)
314 1vg0_A RAB proteins geranylger 95.7 0.0082 2.8E-07 66.9 5.5 35 76-110 7-41 (650)
315 3cty_A Thioredoxin reductase; 95.7 0.056 1.9E-06 54.9 11.4 33 77-109 155-187 (319)
316 3qfa_A Thioredoxin reductase 1 95.6 0.089 3E-06 57.7 13.3 32 78-109 211-242 (519)
317 3llv_A Exopolyphosphatase-rela 95.6 0.011 3.8E-07 52.3 4.9 33 78-110 7-39 (141)
318 2a87_A TRXR, TR, thioredoxin r 95.6 0.033 1.1E-06 57.2 9.1 33 77-109 155-187 (335)
319 3uox_A Otemo; baeyer-villiger 95.5 0.014 4.9E-07 64.4 6.6 36 76-111 184-219 (545)
320 2gv8_A Monooxygenase; FMO, FAD 95.5 0.023 8E-07 61.0 8.2 33 77-109 212-245 (447)
321 1lss_A TRK system potassium up 95.5 0.012 4.2E-07 51.7 4.9 33 78-110 5-37 (140)
322 1id1_A Putative potassium chan 95.5 0.016 5.6E-07 52.1 5.5 35 76-110 2-36 (153)
323 3lzw_A Ferredoxin--NADP reduct 95.1 0.059 2E-06 54.8 9.3 34 77-110 154-187 (332)
324 3ic5_A Putative saccharopine d 95.1 0.018 6.1E-07 48.9 4.5 34 78-111 6-40 (118)
325 3fbs_A Oxidoreductase; structu 95.0 0.063 2.2E-06 53.6 9.0 32 77-109 141-172 (297)
326 1hyu_A AHPF, alkyl hydroperoxi 94.5 0.12 4E-06 56.8 10.2 34 77-110 355-388 (521)
327 3c85_A Putative glutathione-re 94.5 0.034 1.2E-06 51.6 5.1 35 76-110 38-73 (183)
328 2hmt_A YUAA protein; RCK, KTN, 94.5 0.031 1.1E-06 49.2 4.6 34 78-111 7-40 (144)
329 4gcm_A TRXR, thioredoxin reduc 94.3 0.03 1E-06 56.9 4.5 33 78-110 146-178 (312)
330 3k30_A Histamine dehydrogenase 94.2 0.13 4.4E-06 58.5 10.0 34 77-110 523-558 (690)
331 4a9w_A Monooxygenase; baeyer-v 94.1 0.03 1E-06 57.7 4.0 34 76-110 162-195 (357)
332 4b63_A L-ornithine N5 monooxyg 94.1 0.55 1.9E-05 51.0 14.4 34 77-110 246-281 (501)
333 3klj_A NAD(FAD)-dependent dehy 94.1 0.039 1.4E-06 58.0 4.9 35 77-111 146-180 (385)
334 1cjc_A Protein (adrenodoxin re 94.0 0.35 1.2E-05 52.0 12.5 35 77-111 145-200 (460)
335 3ado_A Lambda-crystallin; L-gu 94.0 0.043 1.5E-06 55.7 4.8 35 76-110 5-39 (319)
336 1f0y_A HCDH, L-3-hydroxyacyl-C 94.0 0.054 1.8E-06 54.8 5.6 33 78-110 16-48 (302)
337 4e12_A Diketoreductase; oxidor 93.9 0.052 1.8E-06 54.4 5.3 34 77-110 4-37 (283)
338 3l4b_C TRKA K+ channel protien 93.9 0.041 1.4E-06 52.7 4.4 33 79-111 2-34 (218)
339 2dpo_A L-gulonate 3-dehydrogen 93.9 0.046 1.6E-06 55.7 4.8 36 76-111 5-40 (319)
340 4a5l_A Thioredoxin reductase; 93.7 0.047 1.6E-06 55.2 4.6 34 77-110 152-185 (314)
341 1pzg_A LDH, lactate dehydrogen 93.6 0.074 2.5E-06 54.6 5.8 34 77-110 9-43 (331)
342 1lqt_A FPRA; NADP+ derivative, 93.5 0.25 8.4E-06 53.1 10.0 35 76-110 146-201 (456)
343 3ghy_A Ketopantoate reductase 93.1 0.078 2.7E-06 54.5 5.1 33 77-109 3-35 (335)
344 3i83_A 2-dehydropantoate 2-red 93.1 0.08 2.7E-06 54.1 5.1 32 78-109 3-34 (320)
345 1ps9_A 2,4-dienoyl-COA reducta 93.0 0.37 1.3E-05 54.6 10.9 29 77-105 494-522 (671)
346 3k96_A Glycerol-3-phosphate de 93.0 0.077 2.6E-06 55.0 4.8 36 75-110 27-62 (356)
347 3tl2_A Malate dehydrogenase; c 92.8 0.11 3.7E-06 52.8 5.6 35 75-109 6-41 (315)
348 1bg6_A N-(1-D-carboxylethyl)-L 92.7 0.091 3.1E-06 54.4 4.9 34 77-110 4-37 (359)
349 2gag_A Heterotetrameric sarcos 92.6 0.27 9.2E-06 58.1 9.3 33 78-110 285-317 (965)
350 2y0c_A BCEC, UDP-glucose dehyd 92.5 0.094 3.2E-06 56.7 4.9 36 76-111 7-42 (478)
351 2ewd_A Lactate dehydrogenase,; 92.5 0.12 4E-06 52.7 5.4 34 77-110 4-38 (317)
352 3dfz_A SIRC, precorrin-2 dehyd 92.5 0.11 3.9E-06 49.7 4.9 36 74-109 28-63 (223)
353 2raf_A Putative dinucleotide-b 92.5 0.12 4.3E-06 49.0 5.2 35 77-111 19-53 (209)
354 3lk7_A UDP-N-acetylmuramoylala 92.5 0.11 3.8E-06 55.8 5.4 35 76-110 8-42 (451)
355 2ew2_A 2-dehydropantoate 2-red 92.5 0.098 3.4E-06 53.0 4.8 32 78-109 4-35 (316)
356 1kyq_A Met8P, siroheme biosynt 92.4 0.083 2.9E-06 52.3 4.0 34 76-109 12-45 (274)
357 3doj_A AT3G25530, dehydrogenas 92.4 0.14 4.9E-06 51.9 5.8 35 77-111 21-55 (310)
358 1ks9_A KPA reductase;, 2-dehyd 92.3 0.12 4.2E-06 51.6 5.2 32 79-110 2-33 (291)
359 3vtf_A UDP-glucose 6-dehydroge 92.3 0.13 4.6E-06 54.5 5.6 36 76-111 20-55 (444)
360 1lld_A L-lactate dehydrogenase 92.3 0.12 4.1E-06 52.6 5.2 33 78-110 8-42 (319)
361 3hn2_A 2-dehydropantoate 2-red 92.2 0.097 3.3E-06 53.2 4.3 32 78-109 3-34 (312)
362 4g65_A TRK system potassium up 92.2 0.055 1.9E-06 58.3 2.5 36 77-112 3-38 (461)
363 3gg2_A Sugar dehydrogenase, UD 92.2 0.11 3.8E-06 55.6 4.9 34 78-111 3-36 (450)
364 3gvi_A Malate dehydrogenase; N 92.1 0.15 5E-06 52.0 5.5 36 75-110 5-41 (324)
365 1t2d_A LDH-P, L-lactate dehydr 92.0 0.16 5.3E-06 51.9 5.6 34 77-110 4-38 (322)
366 2x5o_A UDP-N-acetylmuramoylala 92.0 0.096 3.3E-06 56.1 4.2 35 77-111 5-39 (439)
367 2hjr_A Malate dehydrogenase; m 91.9 0.15 5.3E-06 52.1 5.4 33 78-110 15-48 (328)
368 3e8x_A Putative NAD-dependent 91.8 0.18 6E-06 48.7 5.5 38 74-111 18-56 (236)
369 2uyy_A N-PAC protein; long-cha 91.8 0.19 6.5E-06 51.0 5.9 34 77-110 30-63 (316)
370 3k6j_A Protein F01G10.3, confi 91.7 0.19 6.3E-06 53.7 5.9 36 76-111 53-88 (460)
371 3ggo_A Prephenate dehydrogenas 91.7 0.17 6E-06 51.3 5.5 36 75-110 31-68 (314)
372 3g79_A NDP-N-acetyl-D-galactos 91.6 0.15 5E-06 54.9 5.0 35 77-111 18-54 (478)
373 4dio_A NAD(P) transhydrogenase 91.6 0.18 6E-06 52.8 5.4 35 76-110 189-223 (405)
374 3g17_A Similar to 2-dehydropan 91.5 0.13 4.3E-06 51.8 4.3 33 78-110 3-35 (294)
375 2v6b_A L-LDH, L-lactate dehydr 91.4 0.17 5.9E-06 51.1 5.1 32 79-110 2-35 (304)
376 3p7m_A Malate dehydrogenase; p 91.4 0.2 7E-06 50.9 5.6 36 75-110 3-39 (321)
377 3l9w_A Glutathione-regulated p 91.3 0.16 5.6E-06 53.7 4.9 35 77-111 4-38 (413)
378 3p2y_A Alanine dehydrogenase/p 91.2 0.19 6.3E-06 52.2 5.1 35 76-110 183-217 (381)
379 1jw9_B Molybdopterin biosynthe 91.2 0.17 5.9E-06 49.5 4.8 34 77-110 31-65 (249)
380 3pqe_A L-LDH, L-lactate dehydr 91.2 0.2 6.8E-06 51.1 5.3 34 76-109 4-39 (326)
381 4a7p_A UDP-glucose dehydrogena 91.2 0.19 6.5E-06 53.6 5.3 37 76-112 7-43 (446)
382 1zcj_A Peroxisomal bifunctiona 91.1 0.18 6E-06 54.4 5.1 34 77-110 37-70 (463)
383 3dtt_A NADP oxidoreductase; st 91.0 0.2 6.9E-06 48.8 5.0 37 75-111 17-53 (245)
384 3g0o_A 3-hydroxyisobutyrate de 91.0 0.19 6.4E-06 50.8 4.9 34 77-110 7-40 (303)
385 4e21_A 6-phosphogluconate dehy 91.0 0.19 6.4E-06 52.1 4.9 36 75-110 20-55 (358)
386 3qsg_A NAD-binding phosphogluc 91.0 0.18 6.2E-06 51.2 4.7 34 76-109 23-57 (312)
387 3pid_A UDP-glucose 6-dehydroge 90.9 0.17 5.8E-06 53.6 4.6 34 77-111 36-69 (432)
388 3oj0_A Glutr, glutamyl-tRNA re 90.9 0.093 3.2E-06 46.5 2.2 34 77-110 21-54 (144)
389 3qha_A Putative oxidoreductase 90.8 0.14 4.9E-06 51.5 3.8 35 77-111 15-49 (296)
390 3pef_A 6-phosphogluconate dehy 90.8 0.24 8.2E-06 49.5 5.4 34 78-111 2-35 (287)
391 1mv8_A GMD, GDP-mannose 6-dehy 90.7 0.16 5.4E-06 54.3 4.2 33 79-111 2-34 (436)
392 4huj_A Uncharacterized protein 90.6 0.15 5E-06 49.0 3.5 34 77-110 23-57 (220)
393 1y6j_A L-lactate dehydrogenase 90.6 0.23 7.9E-06 50.5 5.1 35 76-110 6-42 (318)
394 3mog_A Probable 3-hydroxybutyr 90.5 0.21 7.1E-06 54.0 4.9 35 77-111 5-39 (483)
395 3d0o_A L-LDH 1, L-lactate dehy 90.5 0.24 8.1E-06 50.4 5.1 35 75-109 4-40 (317)
396 3hwr_A 2-dehydropantoate 2-red 90.4 0.22 7.4E-06 50.7 4.8 32 77-109 19-50 (318)
397 3ego_A Probable 2-dehydropanto 90.4 0.23 7.9E-06 50.2 5.0 32 78-110 3-34 (307)
398 2vns_A Metalloreductase steap3 90.4 0.27 9.3E-06 46.8 5.1 34 77-110 28-61 (215)
399 1zej_A HBD-9, 3-hydroxyacyl-CO 90.3 0.23 7.9E-06 49.8 4.7 34 76-110 11-44 (293)
400 1z82_A Glycerol-3-phosphate de 90.3 0.25 8.7E-06 50.6 5.2 34 76-109 13-46 (335)
401 1guz_A Malate dehydrogenase; o 90.3 0.26 9E-06 49.9 5.2 32 79-110 2-35 (310)
402 4dll_A 2-hydroxy-3-oxopropiona 90.2 0.21 7.3E-06 50.8 4.5 35 76-110 30-64 (320)
403 3eag_A UDP-N-acetylmuramate:L- 90.2 0.26 8.9E-06 50.3 5.2 33 78-110 5-38 (326)
404 1ldn_A L-lactate dehydrogenase 90.1 0.3 1E-05 49.6 5.5 34 76-109 5-40 (316)
405 2xve_A Flavin-containing monoo 90.0 0.25 8.5E-06 53.2 5.0 34 77-110 197-230 (464)
406 1oju_A MDH, malate dehydrogena 89.9 0.24 8.1E-06 49.7 4.5 33 78-110 1-35 (294)
407 1x13_A NAD(P) transhydrogenase 89.8 0.31 1.1E-05 51.3 5.4 34 77-110 172-205 (401)
408 1ur5_A Malate dehydrogenase; o 89.8 0.32 1.1E-05 49.3 5.3 33 78-110 3-36 (309)
409 3gpi_A NAD-dependent epimerase 89.8 0.33 1.1E-05 48.2 5.5 35 77-111 3-37 (286)
410 3dfu_A Uncharacterized protein 89.7 0.1 3.5E-06 50.2 1.5 32 77-108 6-37 (232)
411 1txg_A Glycerol-3-phosphate de 89.7 0.24 8.1E-06 50.7 4.4 30 79-108 2-31 (335)
412 2qyt_A 2-dehydropantoate 2-red 89.6 0.21 7.3E-06 50.5 4.0 31 78-108 9-45 (317)
413 3l6d_A Putative oxidoreductase 89.6 0.35 1.2E-05 48.9 5.5 34 77-110 9-42 (306)
414 2rcy_A Pyrroline carboxylate r 89.5 0.33 1.1E-05 47.7 5.0 35 77-111 4-42 (262)
415 4ap3_A Steroid monooxygenase; 89.4 0.27 9.2E-06 54.2 4.9 36 76-111 190-225 (549)
416 2zyd_A 6-phosphogluconate dehy 89.4 0.24 8.1E-06 53.6 4.2 38 74-111 12-49 (480)
417 1pjc_A Protein (L-alanine dehy 89.3 0.32 1.1E-05 50.4 5.1 34 77-110 167-200 (361)
418 1l7d_A Nicotinamide nucleotide 89.2 0.36 1.2E-05 50.6 5.4 35 76-110 171-205 (384)
419 3ldh_A Lactate dehydrogenase; 89.2 0.49 1.7E-05 48.1 6.2 34 77-110 21-56 (330)
420 2q3e_A UDP-glucose 6-dehydroge 89.1 0.25 8.7E-06 53.2 4.3 34 78-111 6-41 (467)
421 3pdu_A 3-hydroxyisobutyrate de 89.1 0.27 9.2E-06 49.2 4.2 33 79-111 3-35 (287)
422 2eez_A Alanine dehydrogenase; 89.1 0.35 1.2E-05 50.3 5.2 35 76-110 165-199 (369)
423 1hdo_A Biliverdin IX beta redu 89.0 0.49 1.7E-05 44.0 5.8 35 78-112 4-39 (206)
424 1vpd_A Tartronate semialdehyde 89.0 0.27 9.3E-06 49.3 4.2 33 78-110 6-38 (299)
425 3ius_A Uncharacterized conserv 88.9 0.35 1.2E-05 48.0 4.9 33 78-110 6-38 (286)
426 1a5z_A L-lactate dehydrogenase 88.9 0.34 1.2E-05 49.3 4.8 32 79-110 2-35 (319)
427 4ezb_A Uncharacterized conserv 88.8 0.38 1.3E-05 48.9 5.1 33 78-110 25-58 (317)
428 1dlj_A UDP-glucose dehydrogena 88.8 0.25 8.6E-06 52.1 3.8 32 79-111 2-33 (402)
429 2o3j_A UDP-glucose 6-dehydroge 88.8 0.31 1.1E-05 52.7 4.6 34 78-111 10-45 (481)
430 3vku_A L-LDH, L-lactate dehydr 88.7 0.4 1.4E-05 48.8 5.1 34 76-109 8-43 (326)
431 3nep_X Malate dehydrogenase; h 88.7 0.37 1.3E-05 48.8 4.9 33 78-110 1-35 (314)
432 1x0v_A GPD-C, GPDH-C, glycerol 88.6 0.24 8.4E-06 51.1 3.6 35 77-111 8-49 (354)
433 2f1k_A Prephenate dehydrogenas 88.6 0.37 1.3E-05 47.8 4.8 31 79-109 2-32 (279)
434 3tri_A Pyrroline-5-carboxylate 88.6 0.46 1.6E-05 47.3 5.5 34 77-110 3-39 (280)
435 3h8l_A NADH oxidase; membrane 88.6 1.5 5E-05 46.1 9.8 38 203-244 233-270 (409)
436 2aef_A Calcium-gated potassium 88.5 0.19 6.5E-06 48.5 2.5 35 76-111 8-42 (234)
437 3cky_A 2-hydroxymethyl glutara 88.4 0.32 1.1E-05 48.9 4.2 34 77-110 4-37 (301)
438 4gwg_A 6-phosphogluconate dehy 88.4 0.41 1.4E-05 51.5 5.2 35 77-111 4-38 (484)
439 2h78_A Hibadh, 3-hydroxyisobut 88.4 0.33 1.1E-05 48.9 4.3 33 78-110 4-36 (302)
440 1jay_A Coenzyme F420H2:NADP+ o 88.3 0.43 1.5E-05 45.1 4.9 32 79-110 2-34 (212)
441 2izz_A Pyrroline-5-carboxylate 88.2 0.42 1.4E-05 48.7 5.0 35 76-110 21-59 (322)
442 1evy_A Glycerol-3-phosphate de 88.1 0.28 9.5E-06 51.0 3.6 32 79-110 17-48 (366)
443 2i6t_A Ubiquitin-conjugating e 88.0 0.44 1.5E-05 48.0 4.9 33 78-110 15-49 (303)
444 1nyt_A Shikimate 5-dehydrogena 87.9 0.56 1.9E-05 46.4 5.6 34 76-109 118-151 (271)
445 3ktd_A Prephenate dehydrogenas 87.9 0.47 1.6E-05 48.6 5.1 34 77-110 8-41 (341)
446 3h8v_A Ubiquitin-like modifier 87.9 0.43 1.5E-05 47.6 4.7 35 76-110 35-70 (292)
447 1yqg_A Pyrroline-5-carboxylate 87.9 0.41 1.4E-05 47.0 4.5 31 79-109 2-33 (263)
448 1ez4_A Lactate dehydrogenase; 87.9 0.5 1.7E-05 48.0 5.2 34 76-109 4-39 (318)
449 2vhw_A Alanine dehydrogenase; 87.8 0.51 1.8E-05 49.2 5.4 35 76-110 167-201 (377)
450 4id9_A Short-chain dehydrogena 87.8 0.47 1.6E-05 48.5 5.2 39 73-111 15-54 (347)
451 2vdc_G Glutamate synthase [NAD 87.8 0.54 1.8E-05 50.4 5.7 35 76-110 263-298 (456)
452 2a9f_A Putative malic enzyme ( 87.7 0.5 1.7E-05 48.9 5.1 36 74-109 185-221 (398)
453 3ew7_A LMO0794 protein; Q8Y8U8 87.7 0.56 1.9E-05 44.2 5.3 33 79-111 2-35 (221)
454 4aj2_A L-lactate dehydrogenase 87.6 0.57 2E-05 47.7 5.5 35 75-109 17-53 (331)
455 1hyh_A L-hicdh, L-2-hydroxyiso 87.4 0.46 1.6E-05 48.0 4.7 33 78-110 2-36 (309)
456 2pv7_A T-protein [includes: ch 87.3 0.48 1.7E-05 47.6 4.7 33 78-110 22-55 (298)
457 2g5c_A Prephenate dehydrogenas 87.3 0.5 1.7E-05 46.9 4.8 31 79-109 3-35 (281)
458 3h2s_A Putative NADH-flavin re 87.1 0.61 2.1E-05 44.2 5.2 32 79-110 2-34 (224)
459 3c24_A Putative oxidoreductase 87.1 0.62 2.1E-05 46.4 5.4 32 78-109 12-44 (286)
460 3ond_A Adenosylhomocysteinase; 87.0 0.59 2E-05 50.0 5.3 34 76-109 264-297 (488)
461 3fi9_A Malate dehydrogenase; s 86.9 0.66 2.2E-05 47.5 5.4 35 76-110 7-44 (343)
462 2iz1_A 6-phosphogluconate dehy 86.8 0.53 1.8E-05 50.8 5.0 34 77-110 5-38 (474)
463 2egg_A AROE, shikimate 5-dehyd 86.6 0.6 2.1E-05 46.9 5.0 34 76-109 140-174 (297)
464 3rui_A Ubiquitin-like modifier 86.6 0.65 2.2E-05 47.3 5.2 35 76-110 33-68 (340)
465 2wtb_A MFP2, fatty acid multif 86.6 0.53 1.8E-05 53.6 5.0 33 78-110 313-345 (725)
466 2p4q_A 6-phosphogluconate dehy 86.5 0.61 2.1E-05 50.5 5.3 35 77-111 10-44 (497)
467 4b4o_A Epimerase family protei 86.5 0.68 2.3E-05 46.2 5.4 33 78-110 1-34 (298)
468 2gf2_A Hibadh, 3-hydroxyisobut 86.5 0.52 1.8E-05 47.2 4.4 32 79-110 2-33 (296)
469 1pjq_A CYSG, siroheme synthase 86.5 0.59 2E-05 50.1 5.1 34 76-109 11-44 (457)
470 3phh_A Shikimate dehydrogenase 86.5 0.73 2.5E-05 45.4 5.3 34 77-110 118-151 (269)
471 1vl6_A Malate oxidoreductase; 86.4 0.65 2.2E-05 48.0 5.1 36 74-109 189-225 (388)
472 3o38_A Short chain dehydrogena 86.3 0.88 3E-05 44.6 6.0 36 75-110 20-57 (266)
473 3ojo_A CAP5O; rossmann fold, c 86.3 0.46 1.6E-05 50.3 4.0 34 78-111 12-45 (431)
474 2pgd_A 6-phosphogluconate dehy 86.2 0.61 2.1E-05 50.4 5.1 34 78-111 3-36 (482)
475 3gt0_A Pyrroline-5-carboxylate 86.2 0.68 2.3E-05 45.0 5.0 33 78-110 3-39 (247)
476 3dhn_A NAD-dependent epimerase 86.2 0.63 2.2E-05 44.2 4.7 35 78-112 5-40 (227)
477 3o0h_A Glutathione reductase; 86.2 0.65 2.2E-05 50.2 5.3 34 77-110 191-224 (484)
478 1yj8_A Glycerol-3-phosphate de 86.1 0.47 1.6E-05 49.4 4.0 33 78-110 22-61 (375)
479 1zud_1 Adenylyltransferase THI 86.1 0.6 2.1E-05 45.6 4.5 34 77-110 28-62 (251)
480 3d4o_A Dipicolinate synthase s 85.8 0.81 2.8E-05 45.8 5.4 35 76-110 154-188 (293)
481 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.7 0.59 2E-05 50.4 4.6 33 78-110 2-34 (478)
482 3c7a_A Octopine dehydrogenase; 85.5 0.41 1.4E-05 50.4 3.3 30 78-107 3-33 (404)
483 3d1l_A Putative NADP oxidoredu 85.5 0.61 2.1E-05 45.8 4.3 32 78-109 11-43 (266)
484 4ffl_A PYLC; amino acid, biosy 85.5 0.78 2.7E-05 47.4 5.3 34 78-111 2-35 (363)
485 2rir_A Dipicolinate synthase, 85.4 0.87 3E-05 45.8 5.5 35 76-110 156-190 (300)
486 1wdk_A Fatty oxidation complex 85.4 0.63 2.1E-05 52.9 4.8 34 77-110 314-347 (715)
487 2hk9_A Shikimate dehydrogenase 85.3 0.72 2.5E-05 45.7 4.7 34 77-110 129-162 (275)
488 1p77_A Shikimate 5-dehydrogena 85.2 0.66 2.3E-05 45.9 4.4 34 76-109 118-151 (272)
489 3gvp_A Adenosylhomocysteinase 85.2 0.77 2.6E-05 48.2 5.0 35 76-110 219-253 (435)
490 2cvz_A Dehydrogenase, 3-hydrox 85.2 0.57 1.9E-05 46.6 4.0 31 79-110 3-33 (289)
491 4e4t_A Phosphoribosylaminoimid 85.2 1 3.4E-05 47.7 6.1 37 74-110 32-68 (419)
492 1np3_A Ketol-acid reductoisome 85.2 0.8 2.7E-05 46.9 5.1 33 78-110 17-49 (338)
493 3ce6_A Adenosylhomocysteinase; 85.2 0.8 2.7E-05 49.3 5.3 35 76-110 273-307 (494)
494 3h5n_A MCCB protein; ubiquitin 85.1 0.77 2.6E-05 47.3 5.0 34 77-110 118-152 (353)
495 2zqz_A L-LDH, L-lactate dehydr 85.0 0.87 3E-05 46.4 5.2 34 76-109 8-43 (326)
496 3b1f_A Putative prephenate deh 85.0 0.69 2.3E-05 46.1 4.5 33 77-109 6-40 (290)
497 2pzm_A Putative nucleotide sug 85.0 0.96 3.3E-05 45.9 5.7 36 75-110 18-54 (330)
498 2we8_A Xanthine dehydrogenase; 84.8 0.88 3E-05 47.4 5.3 35 77-111 204-238 (386)
499 4gbj_A 6-phosphogluconate dehy 84.7 0.61 2.1E-05 46.8 3.9 35 78-112 6-40 (297)
500 3don_A Shikimate dehydrogenase 84.7 0.68 2.3E-05 45.9 4.2 36 76-111 116-152 (277)
No 1
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=7.4e-44 Score=400.04 Aligned_cols=424 Identities=20% Similarity=0.200 Sum_probs=266.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
.++||+||||||+||++|+.|+++|++|+||||.+..... ..+..++++++++|+++ |+++++.+.+.......
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~----~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~~ 77 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPY----PRAAGQNPRTMELLRIG--GVADEVVRADDIRGTQG 77 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCC----CCSCCBCHHHHHHHHHT--TCHHHHHHSCCSSCTTS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CccceECHHHHHHHHHc--CCHHHHHhhCCCccccc
Confidence 4689999999999999999999999999999998654322 22567999999999999 89999988765332211
Q ss_pred e-e--eeecCCCceee----eccCCCcccccCCCe-EEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCC----eE
Q 005770 156 N-G--LVDGISGSWYI----KFDTFTPAAEKGLPV-TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD----KV 221 (678)
Q Consensus 156 ~-~--~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~----~v 221 (678)
. . ......+.... .++..........|. .+.++|..|++.|.+.+. +..++++++|++++++++ +|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v 157 (535)
T 3ihg_A 78 DFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV 157 (535)
T ss_dssp CCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE
T ss_pred ceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE
Confidence 0 0 11122222222 111000000011121 468899999999999873 356999999999999998 99
Q ss_pred EEEEcCC---cEEeccEEEEecCCCchhhhhhc-CCCCccccccEEEEEEecCCCCCc-CC-cceEEEecCceEEEEeeC
Q 005770 222 SVVLENG---QCYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADI-ES-VGYRVFLGHKQYFVSSDV 295 (678)
Q Consensus 222 ~v~~~dg---~~i~a~~vVgADG~~S~VR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 295 (678)
++++.++ .+++||+||+|||++|.||+.++ ......+.+......+....+... .. ..+..+..++...++++.
T Consensus 158 ~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~ 237 (535)
T 3ihg_A 158 TARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPT 237 (535)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEe
Confidence 9999886 68999999999999999999983 333333332221111111111111 11 122333444444444555
Q ss_pred CCCeEEEEEEEeCCC-CCCCCcchhHHHHHHHhccCChhHHHHHHcC----ChhhhhhcccccCCCCccccCCcEEEEcc
Q 005770 296 GAGKMQWYAFHKEPA-GGVDGPEGKKERLLKIFEGWCDNVVDLILAT----DEEAILRRDIYDRTPIFTWGRGRVTLLGD 370 (678)
Q Consensus 296 ~~~~~~w~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~grv~LvGD 370 (678)
.+.. .|.+....+. ..........+.+.+.+.. .+... .......|.+. ...+.+|..|||+|+||
T Consensus 238 ~~~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~grv~LvGD 308 (535)
T 3ihg_A 238 DRPD-RHTLFVEYDPDEGERPEDFTPQRCVELIGL-------ALDAPEVKPELVDIQGWEMA-ARIAERWREGRVFLAGD 308 (535)
T ss_dssp SSTT-EEEEEEEECTTTTCCGGGCCHHHHHHHHHH-------HHTCSSCCCEEEEEEEEEEE-EEEESCSEETTEEECTT
T ss_pred cCCC-EEEEEEeeCccccCccccCCHHHHHHHHHH-------HhCCCCCceeEEEeeEeeee-EEEECccccCCEEEEec
Confidence 5433 2333322221 1111112223333332221 11100 00111122222 23456899999999999
Q ss_pred ccCCCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhhhhc
Q 005770 371 SVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLG 450 (678)
Q Consensus 371 AAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (678)
|||.|+|++|||||+||+||.+|+|+|+.++++.+ .+.+|++|+++|++++..++.++..........
T Consensus 309 AAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~-------~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~~~----- 376 (535)
T 3ihg_A 309 AAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQA-------GAGLLDTYEDERKVAAELVVAEALAIYAQRMAP----- 376 (535)
T ss_dssp TTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSS-------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCG-----
T ss_pred ccccCCCccCCccccccccHHHHHHHHHHHhcCCC-------cHHHHHhhHHHHHHHHHHHHHHHHHhhHhhccc-----
Confidence 99999999999999999999999999999987642 267899999999999999988775432111000
Q ss_pred CCCCcccccccccccCCCCcchhhHHhhhhhhhhHhhhccccccceeeecccccccccCCCCCCccccCcccch-hhhhh
Q 005770 451 VGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSIGQLVISYDHICISSKLEGRSPCCKLSDKASD-NLRTW 529 (678)
Q Consensus 451 ~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~i~~~~s~~~~~~~~~~~~~~~~~~pG~-~p~~~ 529 (678)
+ .... . .+ .-...+..+||+|.+++++..+..+ . ..........+||+ +||+|
T Consensus 377 -~-----~~~~-~------------~~--~~~~~~~~~~~~y~~~~~~~~~~~~-~----~~~~~~~~~~~pG~r~p~~~ 430 (535)
T 3ihg_A 377 -H-----MAEV-W------------DK--SVGYPETLLGFRYRSSAVLATDDDP-A----RVENPLTPSGRPGFRGPHVL 430 (535)
T ss_dssp -G-----GTTT-S------------CC--CCCHHHHHTSBCCCSTTCCCSCCCC-C----SBCCTTSCCCCTTSBCCCCE
T ss_pred -c-----cCcc-c------------cc--ccccceeeeCcccCCCceecCCCCC-C----cccccCCCCCCCCCcCCCce
Confidence 0 0000 0 00 0112456689999999998665221 0 00011223348999 99999
Q ss_pred h-cCC--hhhhHhcCCceEEEecCCC
Q 005770 530 F-RDD--DALERAMNGEWFLVPSGSE 552 (678)
Q Consensus 530 ~-~~g--~~~~~~~~~~~~Ll~~~~~ 552 (678)
| .+| .+++|+++.+|+||.+.+.
T Consensus 431 l~~~~~~~~~~dl~g~~f~ll~~~~~ 456 (535)
T 3ihg_A 431 VSRHGERLSTVDLFGDGWTLLAGELG 456 (535)
T ss_dssp EEETTEEEEGGGGCSSSEEEEECTTC
T ss_pred eecCCceeeHHHhcCCceEEEecCCc
Confidence 9 566 5999999999999997543
No 2
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=1.7e-43 Score=392.14 Aligned_cols=410 Identities=15% Similarity=0.111 Sum_probs=259.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
...+||+||||||+||++|+.|+++|++|+||||.+.+... ..++.++++++++|+++ |+++++.+. .. . .
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~-~-~ 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE----SRGLGFTARTMEVFDQR--GILPAFGPV-ET-S-T 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCC----CCSEEECHHHHHHHHHT--TCGGGGCSC-CE-E-S
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCC----CceeEECHHHHHHHHHC--CCHHHHHhc-cc-c-c
Confidence 35689999999999999999999999999999998654322 23678999999999999 777666443 11 0 0
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCc---
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ--- 229 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~--- 229 (678)
.. .. +...+.+.. .....+..+.++|..|+++|.+.+. +..++++++|+++++++++|++++.+++
T Consensus 81 ~~-~~----~~~~~~~~~----~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~ 151 (499)
T 2qa2_A 81 QG-HF----GGRPVDFGV----LEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPR 151 (499)
T ss_dssp EE-EE----TTEEEEGGG----STTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEE
T ss_pred cc-ee----cceeccccc----CCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcE
Confidence 00 01 111122111 1123456789999999999998873 3568999999999999999999998875
Q ss_pred EEeccEEEEecCCCchhhhhhc-CCCCccccccEEEEEEecCCCCCcCCcceEEEecCceEEEEeeCCCCeEEEEEEEeC
Q 005770 230 CYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKE 308 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~VR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 308 (678)
+++||+||+|||++|.||+.++ ......+.. ..+....... ... ..+..+..++++++.+|.+++.+.|.+....
T Consensus 152 ~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~-~~~~~~v~~~--~~~-~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~ 227 (499)
T 2qa2_A 152 SLTTRYVVGCDGGRSTVRKAAGFDFPGTSASR-EMFLADIRGC--EIT-PRPIGETVPLGMVMSAPLGDGVDRIIVCERG 227 (499)
T ss_dssp EEEEEEEEECCCTTCHHHHHTTCCCCEECCCC-CEEEEEEESC--CCC-CEEEEEEETTEEEEEEECSSSCEEEEEEETT
T ss_pred EEEeCEEEEccCcccHHHHHcCCCCCCCCCcc-EEEEEEEEEC--CCC-cceEEEECCCeEEEEEEcCCCEEEEEEEecC
Confidence 8999999999999999999984 233333333 2333322221 111 1234455566677777887776555544322
Q ss_pred CCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhhh-hhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhHHH
Q 005770 309 PAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAI-LRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAI 387 (678)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~gl 387 (678)
..........+.+++.+.+..+.... + ......+ ..+... ...+.+|+.|||+|+|||||.|+|++|||||+||
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~~~~~---~-~~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi 302 (499)
T 2qa2_A 228 APARRRTGPPPYQEVAAAWQRLTGQD---I-SHGEPVWVSAFGDP-ARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSV 302 (499)
T ss_dssp CCCCCCSSSCCHHHHHHHHHHHHSCC---C-TTCEEEEEEEECCC-EEECSCSEETTEEECGGGTEEECCCSSCHHHHHH
T ss_pred CCCccccCCCCHHHHHHHHHHHhCCC---C-CccceeEEEEEeCC-cEEcccccCCCEEEEecccccCCCccccchhhhH
Confidence 21111111223344444443211100 0 0001111 111111 2345689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhhhhcCCCCcccccccccccCC
Q 005770 388 EDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHP 467 (678)
Q Consensus 388 ~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~ 467 (678)
+||.+|+|+|+.++++.+ .+.+|++|+++|++++..++..++.+..+. . .......+|+..+.+.
T Consensus 303 ~DA~~La~~La~~l~g~~-------~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~-------~-~~~~~~~~R~~~~~~~ 367 (499)
T 2qa2_A 303 QDSVNLGWKLAAVVSGRA-------PAGLLDTYHEERHPVGRRLLMNTQAQGMLF-------L-SGDEMQPLRDVLSELI 367 (499)
T ss_dssp HHHHHHHHHHHHHHTTSS-------CTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H-CCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------c-CCchHHHHHHHHHHhh
Confidence 999999999999987642 268999999999999998887765433221 1 1222334444332211
Q ss_pred CCcchhhHHhhhhhhhhHhhhccccccceeeecccccccccCCCCCCccccCcccch-hhhhhhc--CC-hhhhHhcCC-
Q 005770 468 GRVGGRFFIDLAMPLMLSWVLGGNSIGQLVISYDHICISSKLEGRSPCCKLSDKASD-NLRTWFR--DD-DALERAMNG- 542 (678)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~i~~~~s~~~~~~~~~~~~~~~~~~pG~-~p~~~~~--~g-~~~~~~~~~- 542 (678)
. .+ .+.+....... .++++ |+.++ +. ...||+ +||+|+. +| ++++|+++.
T Consensus 368 ~-~~--~~~~~~~~~~~--~~~~~--------Y~~~~------~~------~~~~G~r~p~~~l~~~~~~~~l~d~~~~~ 422 (499)
T 2qa2_A 368 R-YD--EVSRHLAGMVS--GLDIR--------YEVDG------GD------HPLLGMRMPHQELVRAHGKTSTTELLHPA 422 (499)
T ss_dssp T-SS--HHHHHHHHHHH--TTTCC--------CCCCS------CS------CTTTTSBCCCCEEECSSSEEETTGGGTTC
T ss_pred c-CH--HHHHHHHHHHh--CCCCc--------cCCCC------CC------CCCCCCCCCCCeeecCCCceeHHHHhcCC
Confidence 1 11 01111111111 13334 43211 10 116899 9999993 45 689999965
Q ss_pred ceEEEecCC
Q 005770 543 EWFLVPSGS 551 (678)
Q Consensus 543 ~~~Ll~~~~ 551 (678)
.|+||.+++
T Consensus 423 ~~~ll~~~~ 431 (499)
T 2qa2_A 423 RGVLLDIAD 431 (499)
T ss_dssp SEEEEECSC
T ss_pred eEEEEEecC
Confidence 699999965
No 3
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=2.1e-43 Score=391.43 Aligned_cols=411 Identities=15% Similarity=0.128 Sum_probs=257.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
.++.+||+||||||+||++|+.|+++|++|+|+||.+.+... ..+..++++++++|+++ |+++++.+. .. ..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~-~~ 79 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGE----SRGLGFTARTMEVFDQR--GILPRFGEV-ET-ST 79 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCC----CCSEEECHHHHHHHHTT--TCGGGGCSC-CB-CC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CCcceECHHHHHHHHHC--CCHHHHHhc-cc-cc
Confidence 456689999999999999999999999999999998654322 23678999999999999 777766443 11 10
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCc--
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ-- 229 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~-- 229 (678)
. . .. +...+.+.. .....+..+.++|..|+++|.+.+. +..++++++|+++++++++|++++++++
T Consensus 80 ~-~-~~----~~~~~~~~~----~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~ 149 (500)
T 2qa1_A 80 Q-G-HF----GGLPIDFGV----LEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGK 149 (500)
T ss_dssp E-E-EE----TTEEEEGGG----STTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEE
T ss_pred c-c-cc----cceeccccc----CCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCC
Confidence 0 0 01 111122111 1112345689999999999998773 3568999999999999999999998775
Q ss_pred -EEeccEEEEecCCCchhhhhhcC-CCCccccccEEEEEEecCCCCCcCCcceEEEecCceEEEEeeCCCCeEEEEEEEe
Q 005770 230 -CYAGDLLIGADGIWSKVRKNLFG-PQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHK 307 (678)
Q Consensus 230 -~i~a~~vVgADG~~S~VR~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 307 (678)
+++||+||+|||++|.||++++. .....+.. ..+....... +.. ..+.++..++++++.+|.+++.+.|.+...
T Consensus 150 ~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~ 225 (500)
T 2qa1_A 150 HTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATM-EMYLADIKGV--ELQ-PRMIGETLPGGMVMVGPLPGGITRIIVCER 225 (500)
T ss_dssp EEEEESEEEECCCTTCHHHHHTTCCCCEECCCC-EEEEEEEESC--CCC-CEEEEEEETTEEEEEEEETTTEEEEEEEET
T ss_pred EEEEeCEEEECCCcchHHHHHcCCCcCCCccce-EEEEEEEEeC--CCC-CceEEEECCCcEEEEEEcCCCEEEEEEEcC
Confidence 89999999999999999999842 33333332 3333332221 111 123445556666777787777655554332
Q ss_pred CCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhhh-hhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhHH
Q 005770 308 EPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAI-LRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMA 386 (678)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~g 386 (678)
...........+.+++.+.+..+.... + ......+ ..+... ...+.+|+.|||+|+|||||.|+|++|||||+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~-~~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~g 300 (500)
T 2qa1_A 226 GTPPQRRETPPSWHEVADAWKRLTGDD---I-AHAEPVWVSAFGNA-TRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTS 300 (500)
T ss_dssp TCCC-----CCCHHHHHHHHHHHHSCC---C-TTSEEEEEEEEECC-EEECSCSEETTEEECGGGTEECCCCSSCHHHHH
T ss_pred CCCCccccCCCCHHHHHHHHHHhcCCC---C-CccceeEEEEeccC-cEEccccccCCEEEEEccccCCCCccccchhhh
Confidence 211111111123344444433211100 0 0001111 111111 234568999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhhhhcCCCCcccccccccccC
Q 005770 387 IEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPH 466 (678)
Q Consensus 387 l~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~ 466 (678)
|+||.+|+|+|+.++++.+ .+.+|++|+++|++++..++..++.+..+. . .......+|+..+.+
T Consensus 301 i~DA~~La~~La~~~~g~~-------~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~-------~-~~~~~~~~R~~~~~~ 365 (500)
T 2qa1_A 301 IQDAVNLGWKLGAVVNGTA-------TEELLDSYHSERHAVGKRLLMNTQAQGLLF-------L-SGPEVQPLRDVLTEL 365 (500)
T ss_dssp HHHHHHHHHHHHHHHTTSS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H-SCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------c-CCchHHHHHHHHHHh
Confidence 9999999999999987642 378999999999999998887765433221 1 112233444433221
Q ss_pred CCCcchhhHHhhhhhhhhHhhhccccccceeeecccccccccCCCCCCccccCcccch-hhhhhhc--CC-hhhhHhcCC
Q 005770 467 PGRVGGRFFIDLAMPLMLSWVLGGNSIGQLVISYDHICISSKLEGRSPCCKLSDKASD-NLRTWFR--DD-DALERAMNG 542 (678)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~i~~~~s~~~~~~~~~~~~~~~~~~pG~-~p~~~~~--~g-~~~~~~~~~ 542 (678)
. ..+ .+.+....... .++++ |+.++ +. ...||+ +||+|+. +| ++++|+++.
T Consensus 366 ~-~~~--~~~~~~~~~~~--g~~~~--------Y~~~~------~~------~~~~G~r~p~~~l~~~~~~~~l~d~~~~ 420 (500)
T 2qa1_A 366 I-QYG--EVARHLAGMVS--GLEIT--------YDVGT------GS------HPLLGKRMPALELTTATRETSSTELLHT 420 (500)
T ss_dssp H-TSH--HHHHHHHHHHH--STTCC--------CCCCC------CS------CTTTTSBCCCCEEECSSCEEEHHHHTTT
T ss_pred h-cCH--HHHHHHhhhhc--cCCCc--------cCCCC------Cc------CCcCCCCCCCCeeecCCCcEeHHHHhCC
Confidence 1 111 01111111111 12333 44211 10 116899 9999993 45 699999965
Q ss_pred -ceEEEecCC
Q 005770 543 -EWFLVPSGS 551 (678)
Q Consensus 543 -~~~Ll~~~~ 551 (678)
.|+||.+++
T Consensus 421 ~~~~ll~~~~ 430 (500)
T 2qa1_A 421 ARGVLLDLAD 430 (500)
T ss_dssp CCEEEEETTC
T ss_pred CeEEEEEeCC
Confidence 699999965
No 4
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=2.5e-42 Score=374.55 Aligned_cols=369 Identities=27% Similarity=0.366 Sum_probs=270.4
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccc
Q 005770 73 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (678)
Q Consensus 73 ~~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~ 152 (678)
+.++.+||+||||||+||++|+.|+++|++|+|+||.+.+... ..++.++++++++|+++ |+++++.+.+....
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~----~~~~~l~~~~~~~l~~l--g~~~~~~~~~~~~~ 92 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPV----GAAISVWPNGVKCMAHL--GMGDIMETFGGPLR 92 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--------CEEEECHHHHHHHHHT--TCHHHHHHHSCCCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----CeeEEECHHHHHHHHHC--CCHHHHHhhcCCCc
Confidence 3456799999999999999999999999999999998654321 23678999999999999 88898887664322
Q ss_pred cceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEe
Q 005770 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (678)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~ 232 (678)
.+. +.+...+.....++........+ +..+.++|..|++.|.+.+....++++++|++++.++++|++++.+|++++
T Consensus 93 -~~~-~~~~~~g~~~~~~~~~~~~~~~~-~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 169 (407)
T 3rp8_A 93 -RMA-YRDFRSGENMTQFSLAPLIERTG-SRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSAS 169 (407)
T ss_dssp -EEE-EEETTTCCEEEEEECHHHHHHHS-SCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred -ceE-EEECCCCCEeEEecchhhhhhcC-CceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEe
Confidence 221 33333234334333211011111 235789999999999999866668999999999999999999999999999
Q ss_pred ccEEEEecCCCchhhhhhc-CCCCccccccEEEEEEecCCCCCcCCcceEEEecCceEEEEeeCCCCeEEEEEEEeCCCC
Q 005770 233 GDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAG 311 (678)
Q Consensus 233 a~~vVgADG~~S~VR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 311 (678)
||+||+|||.+|.||+.+. ......+.++.++.++............+..|..++.+++.+|..++.+.|++....+..
T Consensus 170 a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 249 (407)
T 3rp8_A 170 GDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAG 249 (407)
T ss_dssp ESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT
T ss_pred eCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcC
Confidence 9999999999999999994 333555666666666654322222334566677788888888998888888877654433
Q ss_pred CCCCcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhHHHHHHH
Q 005770 312 GVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGY 391 (678)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~Da~ 391 (678)
....+....+.+.+.+..|.+.+.+.+..........+.++...+..+|..+||+|+|||||.++|++|||+|+||+||.
T Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~ 329 (407)
T 3rp8_A 250 LAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAV 329 (407)
T ss_dssp CSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHH
Confidence 33334456678888999999888877766665444334455555557899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhhhhcCCCCcccccccccccCC
Q 005770 392 QLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHP 467 (678)
Q Consensus 392 ~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~ 467 (678)
+|+++|... . +...+|+.|+++|++++..++..++.+..+ +.........+|+..+...
T Consensus 330 ~La~~L~~~---------~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~R~~~l~~~ 388 (407)
T 3rp8_A 330 VLGAVFRQT---------R-DIAAALREYEAQRCDRVRDLVLKARKRCDI-------THGKDMQLTEAWYQELREE 388 (407)
T ss_dssp HHHHHHHSC---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HTTTTHHHHHHHHHHHHSC
T ss_pred HHHHHHhcC---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------hhcCCHHHHHHHHHHHhhc
Confidence 999999842 1 458999999999999999888777654332 2233344566677666543
No 5
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=3.6e-42 Score=386.43 Aligned_cols=430 Identities=15% Similarity=0.125 Sum_probs=257.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+||++|+.|+++|++|+|+||.+.+... ..+..++++++++|+++ |+.+++.+.+......
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~----~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~ 97 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITH----PRVGTIGPRSMELFRRW--GVAKQIRTAGWPGDHP 97 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSS----CCCCEECHHHHHHHHHT--TCHHHHHTSSCCTTSB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CceeeeCHHHHHHHHHc--CChHHHHhhcCCcccc
Confidence 45689999999999999999999999999999998654321 23567999999999999 7889888765433211
Q ss_pred e-eeeeecCCCceeeeccCCCccc--c--cCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcC--
Q 005770 155 I-NGLVDGISGSWYIKFDTFTPAA--E--KGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN-- 227 (678)
Q Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~d-- 227 (678)
. ..+.....+.....++...... . ......+.++|..|+++|.+.+... ++++++|+++++++++|++++.+
T Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~ 176 (549)
T 2r0c_A 98 LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLR 176 (549)
T ss_dssp CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETT
T ss_pred cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECC
Confidence 0 0112222232222222111000 0 0111247899999999999988666 89999999999999999988876
Q ss_pred -C--cEEeccEEEEecCCCchhhhhhc-CCCCccccccEEEEEEecCCCC----CcCCcceEEEecCc-eEEEEeeCCCC
Q 005770 228 -G--QCYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPA----DIESVGYRVFLGHK-QYFVSSDVGAG 298 (678)
Q Consensus 228 -g--~~i~a~~vVgADG~~S~VR~~l~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~ 298 (678)
| ++++||+||+|||++|.||+.++ ......+.+. .+......... ........++..++ ..+++.+..+.
T Consensus 177 ~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~ 255 (549)
T 2r0c_A 177 TGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQV-FRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGR 255 (549)
T ss_dssp TCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEE-EEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSS
T ss_pred CCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccce-EEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCC
Confidence 6 47999999999999999999994 3344444432 22222221100 00111223333333 45555566543
Q ss_pred eEEEEEEEeCCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCC
Q 005770 299 KMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPN 378 (678)
Q Consensus 299 ~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~ 378 (678)
. .|.+....+... ...+...+.+.+.+..-. .........|.+. ...+.+|+.|||+|+|||||.|+|+
T Consensus 256 ~-~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~ 324 (549)
T 2r0c_A 256 G-LYRLTVGVDDAS-KSTMDSFELVRRAVAFDT--------EIEVLSDSEWHLT-HRVADSFSAGRVFLTGDAAHTLSPS 324 (549)
T ss_dssp S-EEEEEEECSTTC-CSCCCHHHHHHHHBCSCC--------CCEEEEEEEEEEC-CEECSCSEETTEEECGGGTEECCCG
T ss_pred c-EEEEEecCCCCC-CCHHHHHHHHHHHhCCCC--------ceeEEEEecchhH-hhhHHhhcCCcEEEEccccccCCCc
Confidence 3 343333222111 112222233333332100 0011111122222 2346689999999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhhhhcCCCCcccc
Q 005770 379 LGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSF 458 (678)
Q Consensus 379 ~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (678)
+|||||+||+||.+|+|+|+.++++.+ .+.+|++|++||++++..++..++....... . ....
T Consensus 325 ~GqG~n~gi~DA~~La~~La~~l~g~a-------~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~---~----~~~~--- 387 (549)
T 2r0c_A 325 GGFGMNTGIGSAADLGWKLAATLRGWA-------GPGLLATYEEERRPVAITSLEEANVNLRRTM---D----RELP--- 387 (549)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTCS-------CTTTTHHHHHHHHHHHHHHHHC-----------------CCCC---
T ss_pred cCCccccccHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---c----cccc---
Confidence 999999999999999999999987642 2578999999999999988877653322111 0 0000
Q ss_pred cccccccCCCCcchhhHHhh----hhh------hh--hHhhhccccccceeeecccccccccCCCCCCccccCcccch-h
Q 005770 459 LTKFRIPHPGRVGGRFFIDL----AMP------LM--LSWVLGGNSIGQLVISYDHICISSKLEGRSPCCKLSDKASD-N 525 (678)
Q Consensus 459 ~r~~~l~~~~~~~~~~~~~~----~~~------~~--~~~~~~~~y~~~~~i~~~~s~~~~~~~~~~~~~~~~~~pG~-~ 525 (678)
. . +....+.....|. .+. .+ ....++++|.+++++ .+..+ . ..........+||+ +
T Consensus 388 -~--~--~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~-~~~~~--~---~~~~~~~~~~~~G~r~ 456 (549)
T 2r0c_A 388 -P--G--LHDDGPRGERIRAAVAEKLERSGARREFDAPGIHFGHTYRSSIVC-GEPET--E---VATGGWRPSARPGARA 456 (549)
T ss_dssp -T--T--TTCCSHHHHHHHHHHHHHHHHTTGGGGGSCHHHHHCCCCCSTTSC-CC--------------CCCCCCTTSBC
T ss_pred -c--c--ccccCcchHHHHHHHHHHHHhhcccccccccceEeccEeCCcccc-CCCCC--C---ccccccCCCCCCCCcC
Confidence 0 0 0000000111111 110 00 123456777666665 22100 0 00000112247999 9
Q ss_pred hhhhhcCChhhhHhcCCceEEEecCC
Q 005770 526 LRTWFRDDDALERAMNGEWFLVPSGS 551 (678)
Q Consensus 526 p~~~~~~g~~~~~~~~~~~~Ll~~~~ 551 (678)
||+|+.+|++++|+++.+|+||.+++
T Consensus 457 p~~~l~~g~~l~d~~~~~~~ll~~~~ 482 (549)
T 2r0c_A 457 PHAWLTPTTSTLDLFGRGFVLLSFGT 482 (549)
T ss_dssp CCCBSSSSCBGGGGCSSSEEEEEESC
T ss_pred CCcEeCCCcCHHHHcCCceEEEEcCC
Confidence 99999888899999999999999865
No 6
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=3.4e-42 Score=386.55 Aligned_cols=419 Identities=16% Similarity=0.136 Sum_probs=265.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+||||||+|+++|+.|+++|++|+|||+.+.+... ..++.++++++++|+++ |+++++.+.+.......
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~----~r~~~l~~~s~~~l~~l--Gl~~~l~~~~~~~~~~~ 121 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGH----DRAGALHIRTVETLDLR--GLLDRFLEGTQVAKGLP 121 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCS----SSCCCBCHHHHHHHHTT--TCHHHHTTSCCBCSBCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCC----ceEEEECHHHHHHHHHc--CChHHHHhcCcccCCce
Confidence 4589999999999999999999999999999998655322 23577999999999999 89998876654322110
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEE--cCC-cE
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG-QC 230 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~--~dg-~~ 230 (678)
..+... ..+.+.. .....++.+.++|..|++.|.+.+. +..++++++|+++++++++|+|++ .+| ++
T Consensus 122 ---~~~~~~-~~~~~~~----~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~ 193 (570)
T 3fmw_A 122 ---FAGIFT-QGLDFGL----VDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYP 193 (570)
T ss_dssp ---BTTBCT-TCCBGGG----SCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEE
T ss_pred ---eCCccc-ccccccc----cCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEE
Confidence 111000 0111111 1123344678999999999999873 346889999999999999999988 678 68
Q ss_pred EeccEEEEecCCCchhhhhhc-CCCCccccccEEEEEEecCCCCCcCCcceEEEecCceEEEE-eeCCCCeE-EEEEEEe
Q 005770 231 YAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVS-SDVGAGKM-QWYAFHK 307 (678)
Q Consensus 231 i~a~~vVgADG~~S~VR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~w~~~~~ 307 (678)
++||+||+|||++|.||+.++ ......|.. .++.......... ..+.+...+.++++. +|..++.+ .|++...
T Consensus 194 ~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~ 269 (570)
T 3fmw_A 194 VRARYGVGCDGGRSTVRRLAADRFPGTEATV-RALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSST 269 (570)
T ss_dssp EEESEEEECSCSSCHHHHHTTCCCCCCCCCE-EEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEEE
T ss_pred EEeCEEEEcCCCCchHHHHcCCCCccceeee-EEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEeC
Confidence 999999999999999999984 334445543 3333332221111 112212223334444 57766654 4444333
Q ss_pred CCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChh-hhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhHH
Q 005770 308 EPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMA 386 (678)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~g 386 (678)
...........+.+++.+.+..+.+... ...... +...+.+. ...+.+|..|||+|+|||||.++|++|||+|+|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~-~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~g 345 (570)
T 3fmw_A 270 GHSPAADEGPVTLEDLGAAVARVRGTPL---TLTEPVSWLSRFGDA-SRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTG 345 (570)
T ss_dssp SCC-----CCCCHHHHHHHTTSSSSCCC---CCCSCCEEEEEECCC-CEECSCSEETTEEECGGGTEECCCCSSCHHHHH
T ss_pred CCCccccccCCCHHHHHHHHHHHhhccc---ccceeeeeeEEeecc-cccccccccCCEEEEEecceecCCCcCcCHhHH
Confidence 2221111122345667777665543211 111111 11222222 234668999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhhhhcCCCCcccccccccccC
Q 005770 387 IEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPH 466 (678)
Q Consensus 387 l~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~ 466 (678)
|+||.+|+|+|+.++++. +.+.+|++|+++|++++..++..++.+ ..+|..+..+...+|++.+.+
T Consensus 346 l~DA~~La~~La~~~~g~-------~~~~lL~~Ye~eR~~~~~~~~~~s~~~-------~~l~~~~~~~~~~lR~~~~~l 411 (570)
T 3fmw_A 346 LQDAVNLGWKLAARVRGW-------GSEELLDTYHDERHPVAERVLLNTRAQ-------LALMRPDEQHTTPLRGFVEEL 411 (570)
T ss_dssp HHHHHHHHHHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHSCSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHhcCCchHHHHHHHHHHHH
Confidence 999999999999988763 237899999999999999887666532 234444444467888877655
Q ss_pred CCCcch--hhHHhhhhhhhhHhhhccccccceeeecccccccccCCCCCCccccCcccch-hhhhhhc--CC--hhhhHh
Q 005770 467 PGRVGG--RFFIDLAMPLMLSWVLGGNSIGQLVISYDHICISSKLEGRSPCCKLSDKASD-NLRTWFR--DD--DALERA 539 (678)
Q Consensus 467 ~~~~~~--~~~~~~~~~~~~~~~~~~~y~~~~~i~~~~s~~~~~~~~~~~~~~~~~~pG~-~p~~~~~--~g--~~~~~~ 539 (678)
. ..+. +.+++.+ ++..+.|+.|. ...+. .....+|. +|+++|. +| ++|+++
T Consensus 412 ~-~~~~~~~~~~~~~--------------~g~~~~Y~~~~---~~~~~----~~~~~~G~r~pd~~l~~~~g~~~~l~~~ 469 (570)
T 3fmw_A 412 L-GTDEVNRYFTGMI--------------TGTDVRYATFA---PAASA----RPHPWPGRFAGGLVLSRPSGEPVPVAEL 469 (570)
T ss_dssp T-TSHHHHHHHHHHH--------------HSTTCCCCCSC---C--------CCCSSTTCBCTTCEECCSTTCCEEHHHH
T ss_pred h-cCHHHHHHHHHHH--------------hCCCcccCCCC---CCCCC----CCCccccCcCCCceeecCCCcceeHHHH
Confidence 4 2221 3333322 22334454320 00011 01126888 8988875 44 689999
Q ss_pred cCC-ceEEEecCCC
Q 005770 540 MNG-EWFLVPSGSE 552 (678)
Q Consensus 540 ~~~-~~~Ll~~~~~ 552 (678)
+.. .|+||.+++.
T Consensus 470 l~~~~~~ll~~~~~ 483 (570)
T 3fmw_A 470 LRSARPLLLDLAGR 483 (570)
T ss_dssp STTCCCEEECSSCB
T ss_pred hcCCeEEEEEecCC
Confidence 976 5999999765
No 7
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=2.4e-41 Score=386.44 Aligned_cols=428 Identities=15% Similarity=0.157 Sum_probs=254.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-----cCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR-----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~-----~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~ 150 (678)
..+||+||||||+||++|+.|++ +|++|+||||.+.+... ..++.++++++++|+++ |+++++.+.+..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~----gra~~l~~~tle~l~~l--Gl~~~l~~~~~~ 80 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYN----GQADGLQCRTLESLKNL--GLADKILSEAND 80 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCS----CSCCEECHHHHHHHHTT--TCHHHHHTTCBC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCC----CceeEEChHHHHHHHHC--CCHHHHHHhccc
Confidence 35899999999999999999999 99999999998654321 23678999999999999 899998876543
Q ss_pred cccceeeeeecC-CCceee--eccCCCcccccCCCeEEEeCHHHHHHHHHHhcC-----CceEEeCCeEEEEEEeC----
Q 005770 151 TGDRINGLVDGI-SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG-----DEIILNESNVIDFKDHG---- 218 (678)
Q Consensus 151 ~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~-----~~~i~~~~~v~~~~~~~---- 218 (678)
. ..+. +++.. .+.... .+.... ........+.++|..|+++|.+.+. ...++++++++++++++
T Consensus 81 ~-~~~~-~~~~~~~g~i~~~~~~~~~~--~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~ 156 (665)
T 1pn0_A 81 M-STIA-LYNPDENGHIRRTDRIPDTL--PGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAE 156 (665)
T ss_dssp C-CEEE-EEEECTTSCEEEEEEEESSC--TTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTT
T ss_pred c-ceEE-EEeCCCCcceEeecccCccc--CCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccc
Confidence 2 2222 22221 122111 111100 0111122468999999999998873 24689999999999875
Q ss_pred ----CeEEEEEc------------------------------------------CC--cEEeccEEEEecCCCchhhhhh
Q 005770 219 ----DKVSVVLE------------------------------------------NG--QCYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 219 ----~~v~v~~~------------------------------------------dg--~~i~a~~vVgADG~~S~VR~~l 250 (678)
++|++++. +| ++++|||||||||++|.||+++
T Consensus 157 ~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~l 236 (665)
T 1pn0_A 157 DPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTL 236 (665)
T ss_dssp CTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred cCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhc
Confidence 46887764 35 4799999999999999999999
Q ss_pred cC-CCCccccccEEEEEEecCCC-CCcCC--cceEEEecCceEEEEeeCCCCeEEEEEEEeCCC---CCCCCcchhHHHH
Q 005770 251 FG-PQEAIYSGYTCYTGIADFVP-ADIES--VGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPA---GGVDGPEGKKERL 323 (678)
Q Consensus 251 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~---~~~~~~~~~~~~l 323 (678)
+. .....+... | ++.+..+ .+... ....++..+.+.++.+|..++.+.|++...... ........+.+++
T Consensus 237 g~~~~g~~~~~~--~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~ 313 (665)
T 1pn0_A 237 GFEMIGEQTDYI--W-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVV 313 (665)
T ss_dssp TCCCEEEEEEEE--E-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHH
T ss_pred CCCCCCCCccEE--E-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHH
Confidence 43 223333321 1 2222111 11111 112223334455666777777666655443321 0001111223444
Q ss_pred HHHhccCChhHHHHHHc--CChhhhhhccccc--CCCCcccc-CCcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHH
Q 005770 324 LKIFEGWCDNVVDLILA--TDEEAILRRDIYD--RTPIFTWG-RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELE 398 (678)
Q Consensus 324 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~--~~~~~~~~-~grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~ 398 (678)
.+.+.. .+.. ........+..+. ...+.+|. .|||+|+|||||.|+|++|||||+||+||.+|+|+|+
T Consensus 314 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa 386 (665)
T 1pn0_A 314 IANAKK-------IFHPYTFDVQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLG 386 (665)
T ss_dssp HHHHHH-------HHTTSCCEEEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-------HhCcccCceeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHH
Confidence 333221 1111 0001111222222 23456788 7999999999999999999999999999999999999
Q ss_pred HHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhhhhcCCCCcccccccccccCCCCcchhhHHhh
Q 005770 399 KACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDL 478 (678)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~ 478 (678)
.++++.+ .+.+|++|++||++++..++.+++.+.. +|...... ...+..+ .....+.+
T Consensus 387 ~vl~g~a-------~~~lL~tYe~eR~p~a~~~i~~s~~~~~-------l~~~~~~~-~~~~~~~------~~~~~~~~- 444 (665)
T 1pn0_A 387 LVLTGRA-------KRDILKTYEEERQPFAQALIDFDHQFSR-------LFSGRPAK-DVADEMG------VSMDVFKE- 444 (665)
T ss_dssp HHHTTCB-------CGGGGHHHHHHHHHHHHHHHHHHHHHHH-------HHHSCBCS-STTCTTS------BCHHHHHH-
T ss_pred HHHcCCC-------cHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhcCCCcc-ccccccc------hhHHHHHH-
Confidence 9987632 2679999999999999988876654332 22211110 0000000 00011111
Q ss_pred hhhhhhHhhhccccccceeeecccccccccCCCCCCccccCcccch-hhhhhhc---CC--hhhhHhcC--CceEEEecC
Q 005770 479 AMPLMLSWVLGGNSIGQLVISYDHICISSKLEGRSPCCKLSDKASD-NLRTWFR---DD--DALERAMN--GEWFLVPSG 550 (678)
Q Consensus 479 ~~~~~~~~~~~~~y~~~~~i~~~~s~~~~~~~~~~~~~~~~~~pG~-~p~~~~~---~g--~~~~~~~~--~~~~Ll~~~ 550 (678)
++..... +.++..+.|+.|++.... +..+......+||. +||+|+. || .++++++. +.|+|+.++
T Consensus 445 ~~~~~~~------~~~g~~~~Y~~s~l~~~~-~~~~~~~~~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~ 517 (665)
T 1pn0_A 445 AFVKGNE------FASGTAINYDENLVTDKK-SSKQELAKNCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFA 517 (665)
T ss_dssp HHHHHHH------HHTTCCCCCCSBTTBCST-TCCGGGBTTSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEE
T ss_pred HHHHhhc------cccccCcccCCCcccCCC-ccccccCCCCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEec
Confidence 1111111 122233444444433210 00101112237999 9999983 56 58999885 479999987
Q ss_pred CC
Q 005770 551 SE 552 (678)
Q Consensus 551 ~~ 552 (678)
+.
T Consensus 518 ~~ 519 (665)
T 1pn0_A 518 GK 519 (665)
T ss_dssp EC
T ss_pred CC
Confidence 55
No 8
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=2.2e-41 Score=367.06 Aligned_cols=347 Identities=22% Similarity=0.322 Sum_probs=228.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHH---hccccccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMR---AGCVTGDR 154 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~---~~~~~~~~ 154 (678)
++|+||||||+||++|+.|+++|++|+|+||++.+..... ..++.++++++++|+++ |+.+.+.. ........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~--G~~i~l~~~~~~~L~~l--g~~~~~~~~~~~~~~~~~~ 77 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILP--GYGIHINSFGKQALQEC--LPAENWLAFEEASRYIGGQ 77 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCC--CCEEEECHHHHHHHHHH--SCHHHHHHHHHHCEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCC--ceEEeeCHHHHHHHHHc--CChHHHHHhhhhhcccCcc
Confidence 5899999999999999999999999999999876532211 12578999999999999 56555432 21111111
Q ss_pred eeeeeecCCCceeeeccCCCcc-cccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCC-eEEEEEcCCcEEe
Q 005770 155 INGLVDGISGSWYIKFDTFTPA-AEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~-~v~v~~~dg~~i~ 232 (678)
.. +.+. .+..........+. ........+.|+|..|+++|.+.++.. ++++++|+++++.++ +|+++++||++++
T Consensus 78 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~-v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ 154 (412)
T 4hb9_A 78 SR-FYNE-RMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANT-IQWNKTFVRYEHIENGGIKIFFADGSHEN 154 (412)
T ss_dssp CE-EECT-TSCEEEC--------------CEEEEEHHHHHHHHHTTCTTT-EECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred ee-EecC-CcceecccCCccccccccccccceEeeHHHHHHHHHhhccce-EEEEEEEEeeeEcCCCeEEEEECCCCEEE
Confidence 11 1111 11111111100000 011111246799999999999988765 889999999988655 6999999999999
Q ss_pred ccEEEEecCCCchhhhhhcCCCCccccccEEEEEEecCCC-------CCcCCcceEEEecC--ceEEEE---eeC-----
Q 005770 233 GDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVP-------ADIESVGYRVFLGH--KQYFVS---SDV----- 295 (678)
Q Consensus 233 a~~vVgADG~~S~VR~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~---~~~----- 295 (678)
|||||||||++|.||+++++.....+.+...+.+.....+ ..+........... ...++. .+.
T Consensus 155 adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (412)
T 4hb9_A 155 VDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVE 234 (412)
T ss_dssp ESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSC
T ss_pred eeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEE
Confidence 9999999999999999996655555555555555433211 11111111111111 111111 111
Q ss_pred ---C--CCeEEEEEEEeCCCCCCC----CcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEE
Q 005770 296 ---G--AGKMQWYAFHKEPAGGVD----GPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVT 366 (678)
Q Consensus 296 ---~--~~~~~w~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~ 366 (678)
. +....|............ ......+.+.+.+..|.+.+.+.+...+...+..+......+..+|..|||+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv~ 314 (412)
T 4hb9_A 235 ASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTVT 314 (412)
T ss_dssp GGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSEE
T ss_pred EeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCEE
Confidence 1 112233333222111111 1223345667778889998888887766555555555555566789999999
Q ss_pred EEccccCCCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 005770 367 LLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (678)
Q Consensus 367 LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~ 437 (678)
|+|||||.|+|++|||||+||+||.+|+|+|+.+..+. .+.+.+|++||++|++++..++..++.
T Consensus 315 LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~------~~~~~aL~~Ye~~R~~~~~~~~~~s~~ 379 (412)
T 4hb9_A 315 LLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGH------EELVKAISDYEQQMRAYANEIVGISLR 379 (412)
T ss_dssp ECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCC------cCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987764 346789999999999999999887754
No 9
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=5.7e-40 Score=374.61 Aligned_cols=424 Identities=15% Similarity=0.170 Sum_probs=249.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~-~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
..+||+||||||+||++|+.|++ +|++|+||||.+.+... ..++.++++++++|+++ |+.+++.+.+.... .
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~----g~a~~l~~~t~e~l~~l--Gl~~~~~~~~~~~~-~ 103 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMEL----GQADGIACRTMEMFEAF--EFADSILKEACWIN-D 103 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSS----CSCCEECHHHHHHHHHT--TCHHHHHHHSEEEC-E
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCC----CceeeeCHHHHHHHHHc--CcHHHHHHhccccc-c
Confidence 46899999999999999999999 99999999998654322 23578999999999999 78888877654221 1
Q ss_pred eeeeeecC---CCceee--eccCCCcccccCCCeEEEeCHHHHHHHHHHhc---C-CceEEeCCeEEEEEEeCC----eE
Q 005770 155 INGLVDGI---SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---G-DEIILNESNVIDFKDHGD----KV 221 (678)
Q Consensus 155 ~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~-~~~i~~~~~v~~~~~~~~----~v 221 (678)
+. ++... .+.... .+... ......+..+.++|..|+++|.+.+ + ...++++++|++++++++ +|
T Consensus 104 ~~-~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v 180 (639)
T 2dkh_A 104 VT-FWKPDPGQPGRIARHGRVQDT--EDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV 180 (639)
T ss_dssp EE-EEEECTTSTTCEEEEEEEESS--CTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE
T ss_pred eE-EECCCCCCCcceEeecccCcc--cCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE
Confidence 11 22211 121111 11110 0111122357899999999999886 3 226889999999998763 58
Q ss_pred EEEEc------CC--cEEeccEEEEecCCCchhhhhhcC-CCCccccccEEEEEEec--CCCCCcCCcceEEEecCceEE
Q 005770 222 SVVLE------NG--QCYAGDLLIGADGIWSKVRKNLFG-PQEAIYSGYTCYTGIAD--FVPADIESVGYRVFLGHKQYF 290 (678)
Q Consensus 222 ~v~~~------dg--~~i~a~~vVgADG~~S~VR~~l~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 290 (678)
+|+++ +| ++++||+||+|||++|.||+.++. .....+.....+..+.. ..+ +.. ....+.. +.+++
T Consensus 181 ~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p-~~~-~~~~~~~-~~g~~ 257 (639)
T 2dkh_A 181 TVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFP-DVR-YKVAIQS-EQGNV 257 (639)
T ss_dssp EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCT-TTT-SEEEEEE-TTEEE
T ss_pred EEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCC-ccc-eeEEEEc-CCceE
Confidence 88775 46 479999999999999999999843 22223332222222110 111 111 1122222 45566
Q ss_pred EEeeCCCC-eEEEEEEEeC--CCCCCCCcchhHHHHHHHhccCChhHHHHHHcCC--hhhhhhccccc--CCCCcccc--
Q 005770 291 VSSDVGAG-KMQWYAFHKE--PAGGVDGPEGKKERLLKIFEGWCDNVVDLILATD--EEAILRRDIYD--RTPIFTWG-- 361 (678)
Q Consensus 291 ~~~~~~~~-~~~w~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~--~~~~~~~~-- 361 (678)
+.+|..++ .+.|++.... ..........+.+++.+.+. +.+.... ...+..+..+. ...+.+|.
T Consensus 258 ~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 330 (639)
T 2dkh_A 258 LIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQ-------RVLHPYKLEVKNVPWWSVYEIGQRICAKYDDV 330 (639)
T ss_dssp EEEECTTSSCEEEEEECC-----------CCCHHHHHHHHH-------HHHTTSCEEEEEEEEEEEECCCCEECSCSBSC
T ss_pred EEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHH-------HHhCcccCcceeeeEEEecccccchhhhhhcc
Confidence 66777776 4555544322 11000111122334433321 1111100 01111122222 12345676
Q ss_pred ----------CCcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHH
Q 005770 362 ----------RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVI 431 (678)
Q Consensus 362 ----------~grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~ 431 (678)
.|||+|+|||||.|+|++|||||+||+||.+|+|+|+.++++.+ .+.+|++|++||++++..+
T Consensus 331 ~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a-------~~~lL~~Ye~eR~~~a~~~ 403 (639)
T 2dkh_A 331 VDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQC-------APELLHTYSSERQVVAQQL 403 (639)
T ss_dssp CCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSB-------CGGGGHHHHHHHHHHHHHH
T ss_pred ccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCC-------cHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999987642 2579999999999999988
Q ss_pred HHHHHHHHHHHhHhhhhhcCCCCcccccccccccCCCCcchhhHHhhhhhhhhH--hhhccccccceeeecccccccccC
Q 005770 432 HGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLS--WVLGGNSIGQLVISYDHICISSKL 509 (678)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~~i~~~~s~~~~~~ 509 (678)
+..++.+. .++....... .+. + .....+.+ ....... ..++.+|.+++++..+
T Consensus 404 ~~~s~~~~-------~~~~~~~~~~--~~~-~------~~~~~~~~-~~~~~~~~~~g~~~~Y~~s~l~~~~-------- 458 (639)
T 2dkh_A 404 IDFDREWA-------KMFSDPAKEG--GQG-G------VDPKEFQK-YFEQHGRFTAGVGTHYAPSLLTGQA-------- 458 (639)
T ss_dssp HHHHHHSC-------C-----------------------CHHHHHH-HHHHHHHHHTTCCCCCCSSSSSCCC--------
T ss_pred HHHHHHHH-------HHhcCCCccc--ccc-c------ccHHHHHH-HHHHhccccccCCcccCCCCccCCC--------
Confidence 77664322 1111110000 000 0 00011111 1100111 1244555555444221
Q ss_pred CCCCCccccCcccch-hhhhhhc---CC--hhhhHhcC--CceEEEecCCCC
Q 005770 510 EGRSPCCKLSDKASD-NLRTWFR---DD--DALERAMN--GEWFLVPSGSEN 553 (678)
Q Consensus 510 ~~~~~~~~~~~~pG~-~p~~~~~---~g--~~~~~~~~--~~~~Ll~~~~~~ 553 (678)
+ .+......+||. +||+|+. || .++++++. +.|+|+.+.+..
T Consensus 459 -~-~~~~~~~~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~~~~ 508 (639)
T 2dkh_A 459 -K-HQALASGFTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFAAQN 508 (639)
T ss_dssp -T-TGGGBTTSCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEECCTT
T ss_pred -C-ccccCCCCCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEecCCC
Confidence 0 000111236999 9999983 56 58999885 479999997653
No 10
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=1.7e-37 Score=335.28 Aligned_cols=330 Identities=22% Similarity=0.268 Sum_probs=225.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+|+++|+.|+++|++|+|+|+.+......+ .++.++++++++|+.+ |+++ ..... ....
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~---~g~~l~~~~~~~l~~~--g~~~--~~~~~-~~~~ 74 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFG---TGIVVQPELVHYLLEQ--GVEL--DSISV-PSSS 74 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCS---CEEECCHHHHHHHHHT--TCCG--GGTCB-CCCE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc---cccccChhHHHHHHHc--CCcc--ccccc-cccc
Confidence 4568999999999999999999999999999999865322222 3577899999999999 5554 12221 1111
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEecc
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~ 234 (678)
.. +.+...+....... .+ ...+.+..|.+.|.+.+.+..++++++|++++++++++++++.+|++++||
T Consensus 75 ~~-~~~~~~g~~~~~~~---------~~-~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad 143 (397)
T 2vou_A 75 ME-YVDALTGERVGSVP---------AD-WRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEAN 143 (397)
T ss_dssp EE-EEETTTCCEEEEEE---------CC-CCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEES
T ss_pred eE-EEecCCCCcccccc---------Cc-ccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECC
Confidence 11 22221222221111 11 124678899999999886666899999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCCCccccccEEEEEEecCCCCCcC-----CcceEEEecCceEEEEeeCCC--C----eEEEE
Q 005770 235 LLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVPADIE-----SVGYRVFLGHKQYFVSSDVGA--G----KMQWY 303 (678)
Q Consensus 235 ~vVgADG~~S~VR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~----~~~w~ 303 (678)
+||+|||.+|.||+.++ ...+.|.++.++.++......+.. ...+.++.+++..++.++.++ + .+.|+
T Consensus 144 ~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (397)
T 2vou_A 144 WVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQ 222 (397)
T ss_dssp EEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEE
T ss_pred EEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEE
Confidence 99999999999999997 555667666666666542111110 123455566666666555543 2 44555
Q ss_pred EEEeCCCCC------CC--------------CcchhHHHHHHHhc-cCChhHHHHHHcCChhhhhhcccccCCCCccccC
Q 005770 304 AFHKEPAGG------VD--------------GPEGKKERLLKIFE-GWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR 362 (678)
Q Consensus 304 ~~~~~~~~~------~~--------------~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 362 (678)
++...+... .. ......+++.+.+. .|.+ +.+.+..... ...+.+... ...+|..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~-~~~~~~~ 298 (397)
T 2vou_A 223 WYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNASS--PFVTVVADA-TVDRMVH 298 (397)
T ss_dssp EEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCSS--CEEEEEEEB-CCSCSEE
T ss_pred EEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccCC--cceeeeeee-cCCceec
Confidence 544432210 00 01222344444443 4555 5555543322 112334333 4568999
Q ss_pred CcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 005770 363 GRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (678)
Q Consensus 363 grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~ 438 (678)
|||+|+|||||.|+|++|||+|+||+||..|+++|... .+.+.+|++|+++|++++..++..++..
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~----------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~ 364 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN----------HDLRGSLQSWETRQLQQGHAYLNKVKKM 364 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC----------SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999741 1347899999999999999888776543
No 11
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=4.3e-37 Score=332.28 Aligned_cols=340 Identities=20% Similarity=0.235 Sum_probs=232.5
Q ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccC-CcccccceeeCh-hHHHHHHhcChhHHHHHHHhcc
Q 005770 72 DSENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRG-EGQYRGPIQIQS-NALAALEAIDLDVAEEVMRAGC 149 (678)
Q Consensus 72 ~~~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~-~g~~~~~~~l~~-~~~~~L~~l~~gl~~~~~~~~~ 149 (678)
|..+..+||+||||||+|+++|+.|+++|++|+|+|+.+.+... .| +.+.+++ +++++|+.+ |+++++.....
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g---~~~~~~~~~~~~~l~~~--gl~~~~~~~~~ 95 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFG---GTLDLHKGSGQEAMKKA--GLLQTYYDLAL 95 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCS---CCEECCTTTHHHHHHHT--TCHHHHHHHCB
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccC---CeeeeCCccHHHHHHhc--ChHHHHHHhhc
Confidence 33456789999999999999999999999999999998654221 22 2455654 578999999 88888876654
Q ss_pred ccccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCc
Q 005770 150 VTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ 229 (678)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~ 229 (678)
.... .+.+ ..+.......... ..... ...++|..|++.|.+.+....++++++|+++++++++|+|++.+|+
T Consensus 96 ~~~~---~~~~-~~g~~~~~~~~~~-~~~~~---~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~ 167 (398)
T 2xdo_A 96 PMGV---NIAD-EKGNILSTKNVKP-ENRFD---NPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKP 167 (398)
T ss_dssp CCCE---EEEC-SSSEEEEECCCGG-GTTSS---CCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSC
T ss_pred ccce---EEEC-CCCCchhhccccc-cCCCC---CceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCc
Confidence 3222 1222 2233222220000 00111 2368999999999998866668899999999998889999999999
Q ss_pred EEeccEEEEecCCCchhhhhhcCCCCccccccEEEEEEecCCC---CCc---CCcceEEEecCceEEEEeeCCCCeEEEE
Q 005770 230 CYAGDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVP---ADI---ESVGYRVFLGHKQYFVSSDVGAGKMQWY 303 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~VR~~l~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 303 (678)
+++||+||+|||.+|.||+.+.. ..+.|.+..++.+...... ... ...+..++++++..++.++..++.+.|+
T Consensus 168 ~~~ad~vV~AdG~~S~vR~~l~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~ 246 (398)
T 2xdo_A 168 SETADLVILANGGMSKVRKFVTD-TEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFG 246 (398)
T ss_dssp CEEESEEEECSCTTCSCCTTTCC-CCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEE
T ss_pred EEecCEEEECCCcchhHHhhccC-CCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEE
Confidence 99999999999999999998843 3445655555554432110 000 0123334455666666667777777776
Q ss_pred EEEeCCCCCC-------CCcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccC-C--cEEEEccccC
Q 005770 304 AFHKEPAGGV-------DGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR-G--RVTLLGDSVH 373 (678)
Q Consensus 304 ~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-g--rv~LvGDAAH 373 (678)
+....+.... ..++...+.+.+.+..|.+.+.+.+.... .+..+.++......+|.. + ||+|+|||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh 324 (398)
T 2xdo_A 247 ISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTL--SFVGLATRIFPLEKPWKSKRPLPITMIGDAAH 324 (398)
T ss_dssp EEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCS--CCEEEEEEECCCCSCCCSCCSSCEEECTHHHH
T ss_pred EEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcc--cceeeeeEeccCCCCcccCCCccEEEEeehhc
Confidence 6554332111 11223345667778888877776665422 222333443333346765 5 9999999999
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhh-HHHHHHHHHHHHhHHHHHHHHHHH
Q 005770 374 AMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPID-IVSALKSYERARRLRVAVIHGLAR 436 (678)
Q Consensus 374 ~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~-~~~~L~~Ye~eRr~~~~~~~~~~~ 436 (678)
.++|++|||+|+||+||.+|+|+|+.. . .+ .+.+|++|+++|++++..++..+.
T Consensus 325 ~~~P~~GqG~n~ai~Da~~La~~L~~~--~-------~~~~~~~L~~Y~~~r~~~~~~~~~~s~ 379 (398)
T 2xdo_A 325 LMPPFAGQGVNSGLVDALILSDNLADG--K-------FNSIEEAVKNYEQQMFIYGKEAQEEST 379 (398)
T ss_dssp CCCCTTSCSHHHHHHHHHHHHHHHHSC--C-------SSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccCccHHHHHHHHHHHHHHHHhc--c-------CchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999863 1 12 578999999999999988776554
No 12
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=2.7e-36 Score=327.38 Aligned_cols=336 Identities=30% Similarity=0.433 Sum_probs=227.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCc-EEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~-~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
+..+||+||||||+|+++|+.|+++|++ |+|+|+.+.+.. . ..++.++++++++|+.+ |+++.+.+.+....
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~-~---g~g~~l~~~~~~~l~~l--g~~~~l~~~~~~~~- 74 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP-L---GVGINIQPAAVEALAEL--GLGPALAATAIPTH- 74 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC-C---SCEEEECHHHHHHHHHT--TCHHHHHHHSEEEC-
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc-c---eeEEEEChHHHHHHHHC--CChHHHHhhCCCcc-
Confidence 3468999999999999999999999999 999999865422 1 23578999999999999 78888876653221
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC----CceEEeCCeEEEEEEeCCeEEEEEcC--
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG----DEIILNESNVIDFKDHGDKVSVVLEN-- 227 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~----~~~i~~~~~v~~~~~~~~~v~v~~~d-- 227 (678)
.+. +.+. .+......... .......+ .+.++|..|++.|.+.+. ...++++++|+++++ +++|++++.+
T Consensus 75 ~~~-~~~~-~g~~~~~~~~~-~~~~~~~~-~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~ 149 (410)
T 3c96_A 75 ELR-YIDQ-SGATVWSEPRG-VEAGNAYP-QYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDG 149 (410)
T ss_dssp EEE-EECT-TSCEEEEEECG-GGGTCSSC-EEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEET
T ss_pred eEE-EEcC-CCCEEeeccCC-ccccCCCC-eeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCC
Confidence 111 2221 23222221110 01112223 468999999999988762 235889999999998 7788888876
Q ss_pred -C--cEEeccEEEEecCCCchhhhhhcCC-CCccccccEEEEEEecCCCCCcCCcceEEEec--CceEEEEeeCCC----
Q 005770 228 -G--QCYAGDLLIGADGIWSKVRKNLFGP-QEAIYSGYTCYTGIADFVPADIESVGYRVFLG--HKQYFVSSDVGA---- 297 (678)
Q Consensus 228 -g--~~i~a~~vVgADG~~S~VR~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---- 297 (678)
| ++++||+||+|||.+|.||+.+... ....|.+...+.++....+.. .... ..+.+ .+..++.+|..+
T Consensus 150 ~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~p~~~~~~~ 227 (410)
T 3c96_A 150 HGKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFL-DGKT-MIVANDEHWSRLVAYPISARHAA 227 (410)
T ss_dssp TSCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCT-TSSE-EEEEECTTCCEEEEEECCHHHHT
T ss_pred CCCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccccc-CCCe-EEEecCCCCcEEEEEecCCcccC
Confidence 7 5899999999999999999998533 234565555555544322111 1112 23333 244555666542
Q ss_pred ---CeEEEEEEEeCC------CCCCCCcchhHHHHHHHhccCCh---hHHHHHHcCChhhhhhcccccCCCCccccCCcE
Q 005770 298 ---GKMQWYAFHKEP------AGGVDGPEGKKERLLKIFEGWCD---NVVDLILATDEEAILRRDIYDRTPIFTWGRGRV 365 (678)
Q Consensus 298 ---~~~~w~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv 365 (678)
..+.|+...... ...........+++++.+..|.. .+.+.+..... +..+.+....+..+|..|||
T Consensus 228 ~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~grv 305 (410)
T 3c96_A 228 EGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQL--ILQYPMVDRDPLPHWGRGRI 305 (410)
T ss_dssp TTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSE--EEEEEEEECCCCSCCCBTTE
T ss_pred CCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcc--cceeecccCCCccccccCCE
Confidence 345676654321 01111122345778888877743 23444443321 23334444445678999999
Q ss_pred EEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHH
Q 005770 366 TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (678)
Q Consensus 366 ~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~ 436 (678)
+|+|||||.|+|++|||+|+||+||.+|+|+|+.. .+.+.+|++|+++|++++..++..++
T Consensus 306 ~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~----------~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 306 TLLGDAAHLMYPMGANGASQAILDGIELAAALARN----------ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp EECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC----------SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc----------CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999863 13478999999999999998887665
No 13
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.7e-37 Score=330.47 Aligned_cols=341 Identities=20% Similarity=0.249 Sum_probs=233.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.... . ..++.++++++++|+.+ |+++.+...+... ..+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~-~---~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~-~~~ 77 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERA-I---NGADLLKPAGIRVVEAA--GLLAEVTRRGGRV-RHE 77 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCCCEECHHHHHHHHHT--TCHHHHHHTTCEE-ECE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCc-c---CceeeECchHHHHHHHc--CcHHHHHHhCCCc-cee
Confidence 458999999999999999999999999999999865421 1 22567999999999999 7888887554321 111
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCC---ceEEeCCeEEEEEEeCCeE--EEEEcCCcE
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD---EIILNESNVIDFKDHGDKV--SVVLENGQC 230 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~~~~~~~~v--~v~~~dg~~ 230 (678)
. +.+. .+.....++.... ....+++.++|..|.+.|.+.+.. ..++++++|++++.+++++ .|++.+|++
T Consensus 78 ~-~~~~-~g~~~~~~~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~ 152 (399)
T 2x3n_A 78 L-EVYH-DGELLRYFNYSSV---DARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRV 152 (399)
T ss_dssp E-EEEE-TTEEEEEEETTSS---CGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCE
T ss_pred E-EEeC-CCCEEEecchHHh---cccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCE
Confidence 1 1221 1222222322110 011236789999999999998853 4688999999999988888 899999999
Q ss_pred EeccEEEEecCCCchhhhhhcCCCCcc--cccc--EEEEEEecCCCCCcCCcceEEEecC-ceEEEEeeCCCCeEEEEEE
Q 005770 231 YAGDLLIGADGIWSKVRKNLFGPQEAI--YSGY--TCYTGIADFVPADIESVGYRVFLGH-KQYFVSSDVGAGKMQWYAF 305 (678)
Q Consensus 231 i~a~~vVgADG~~S~VR~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~w~~~ 305 (678)
++||+||+|||.+|.||+.++...... +.+. .++...... +.... . .++.+ +.+++.+|.+++.+.|+..
T Consensus 153 ~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~---~~~~~-~-~~~~~~~~~~~~~p~~~~~~~~~~~ 227 (399)
T 2x3n_A 153 LRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPC---VAERN-R-LYVDSQGGLAYFYPIGFDRARLVVS 227 (399)
T ss_dssp EEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHH---HHHCE-E-EEECTTSCEEEEEEETTTEEEEEEE
T ss_pred EECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecC---CCCCc-c-EEEcCCCcEEEEEEcCCCEEEEEEE
Confidence 999999999999999999885332222 4444 455443221 11111 2 44555 6667777777777888764
Q ss_pred EeCCCCCCCCcchhHHHHHHHhccCChhHH-HHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhh
Q 005770 306 HKEPAGGVDGPEGKKERLLKIFEGWCDNVV-DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (678)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n 384 (678)
...............+.+.+.+..|.+.+. ..+.......+..+.+.......+|..+||+|+|||||.++|++|||+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~ 307 (399)
T 2x3n_A 228 FPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMN 307 (399)
T ss_dssp CCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHH
T ss_pred eCccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHH
Confidence 321100000000123556666777766552 3333332112333344433445679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 005770 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (678)
Q Consensus 385 ~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~ 439 (678)
+||+||.+|+++|+..++.+ .+.+.+|++|+++|++++..++..++...
T Consensus 308 ~al~da~~La~~L~~~~~~~------~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~ 356 (399)
T 2x3n_A 308 LAIEDASALADALDLALRDA------CALEDALAGYQAERFPVNQAIVSYGHALA 356 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccc------chHHHHHHHHHHHhccHHHHHHHHHHHhh
Confidence 99999999999999887532 23578999999999999998887765433
No 14
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.4e-36 Score=326.11 Aligned_cols=324 Identities=24% Similarity=0.303 Sum_probs=222.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
|..+||+||||||+|+++|+.|+++|++|+|+|+.+.+.. . ..++.++++++++|+.+ |+++++...+... ..
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~-~---~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~-~~ 81 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA-F---GAGIYLWHNGLRVLEGL--GALDDVLQGSHTP-PT 81 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC-C---SSEEEEEHHHHHHHHHT--TCHHHHHTTCBCC-SC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC-C---CceEEeCccHHHHHHHc--CCHHHHHhhCCCc-cc
Confidence 4468999999999999999999999999999999865432 1 23578999999999999 7888887654322 22
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEe
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~ 232 (678)
+. +.+. +.....++.. +.+ .+.++|..|++.|.+.+. +..++++++|++++. ++ +|++.+|++++
T Consensus 82 ~~-~~~~--g~~~~~~~~~------~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ 148 (379)
T 3alj_A 82 YE-TWMH--NKSVSKETFN------GLP-WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLE 148 (379)
T ss_dssp EE-EEET--TEEEEEECGG------GCC-EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEE
T ss_pred eE-EEeC--CceeeeccCC------CCc-eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEE
Confidence 21 2232 3332222210 233 578999999999998873 346899999999987 34 78889999999
Q ss_pred ccEEEEecCCCchhhhhhcCCCCccccccEEEEEEecCC----CCCcCCcceEE--EecCceEEEEeeCCCCeEEEEEEE
Q 005770 233 GDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFV----PADIESVGYRV--FLGHKQYFVSSDVGAGKMQWYAFH 306 (678)
Q Consensus 233 a~~vVgADG~~S~VR~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~w~~~~ 306 (678)
||+||+|||.+|.+|+.++......+.++.++.++.+.. +.......... +++++.+++.+|..++...|++..
T Consensus 149 ad~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 228 (379)
T 3alj_A 149 ADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMA 228 (379)
T ss_dssp CSEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEE
T ss_pred cCEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEe
Confidence 999999999999999998644344455555555554332 21111122332 456667777889888887887655
Q ss_pred eCCCCCCCCcchhHHHHHHHhccCChhHH---HHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchh
Q 005770 307 KEPAGGVDGPEGKKERLLKIFEGWCDNVV---DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGG 383 (678)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~ 383 (678)
... . .. + +.+.+.+..|.+.+. +.+.......+..+.++...+..+|..|||+|+|||||.++|++|||+
T Consensus 229 ~~~-~-~~-~----~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~ 301 (379)
T 3alj_A 229 PAA-D-PR-G----SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGA 301 (379)
T ss_dssp CTT-C-TT-T----TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHH
T ss_pred cCC-C-CC-H----HHHHHHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhH
Confidence 331 1 00 1 112222222211111 222221111223334444334567999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHH
Q 005770 384 CMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 435 (678)
Q Consensus 384 n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~ 435 (678)
|+||+||.+|+++|... .+.+.+|+.|+++|++++..++..+
T Consensus 302 ~~ai~da~~La~~L~~~----------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 302 GCAMVNAFSLSQDLEEG----------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHHHHHHHHHTTSS----------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc----------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999642 1347899999999999999887766
No 15
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=2.6e-35 Score=317.90 Aligned_cols=334 Identities=16% Similarity=0.197 Sum_probs=207.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc--ccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA--IRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~--~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
++||+||||||+|+++|+.|+++|++|+|+|+.+.+ ....+ +..++++++++|+++ |+++.+.+.+... ..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~----~g~l~~~~~~~l~~l--g~~~~~~~~~~~~-~~ 74 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIR----AGVLEQGMVDLLREA--GVDRRMARDGLVH-EG 74 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCC----CCEECHHHHHHHHHT--TCCHHHHHHCEEE-SC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCc----eEeECHHHHHHHHHc--CCcHHHHhcCCcc-ce
Confidence 479999999999999999999999999999998643 11111 224899999999999 7888887654321 11
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeC-CeEEEEE-cCCc-
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHG-DKVSVVL-ENGQ- 229 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~-~~v~v~~-~dg~- 229 (678)
+. +... +. ...++. .........+.+++..+.+.|.+.+ .+..++++++|+++++++ +++.|++ .+|+
T Consensus 75 ~~-~~~~--~~-~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~ 147 (394)
T 1k0i_A 75 VE-IAFA--GQ-RRRIDL---KRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGER 147 (394)
T ss_dssp EE-EEET--TE-EEEECH---HHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEE
T ss_pred EE-EEEC--Cc-eEEecc---ccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcE
Confidence 21 1221 11 111111 0011112357889999999888876 245689999999998764 5678887 7887
Q ss_pred -EEeccEEEEecCCCchhhhhhcCCCCcccccc--EEEEEEecCCCCCcCCcceEEEecCceEEEEeeCCCCeEEEEEEE
Q 005770 230 -CYAGDLLIGADGIWSKVRKNLFGPQEAIYSGY--TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFH 306 (678)
Q Consensus 230 -~i~a~~vVgADG~~S~VR~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 306 (678)
+++||+||+|||.+|.||+.+.......|... ..+.++....+.... ...+...++++++.++..++...|++..
T Consensus 148 ~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 225 (394)
T 1k0i_A 148 LRLDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSH--ELIYANHPRGFALCSQRSATRSQYYVQV 225 (394)
T ss_dssp EEEECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCS--SCEEECCTTCCEEEEEEETTEEEEEEEE
T ss_pred EEEEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCcc--ceEEEEcCCceEEEEecCCCcEEEEEEe
Confidence 79999999999999999999843222233322 233333322222111 1222233444444444444555666544
Q ss_pred eCCCCCCCCcchhHHHHHHHhc-cCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhH
Q 005770 307 KEPAGGVDGPEGKKERLLKIFE-GWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCM 385 (678)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~ 385 (678)
...... .....+.+.+.+. .+.......+..........+++. .....+|..|||+|+|||||.++|++|||+|+
T Consensus 226 ~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ 301 (394)
T 1k0i_A 226 PLSEKV---EDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLR-SFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNL 301 (394)
T ss_dssp CTTCCG---GGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEE-EEEEECSEETTEEECGGGTEECCGGGTCHHHH
T ss_pred CCCCCc---cccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhh-hhhccccccCCEEEEechhhcCCCcccchHHH
Confidence 322110 1111122222222 122211111111010000001111 12244688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 005770 386 AIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (678)
Q Consensus 386 gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~ 438 (678)
||+||.+|+++|...+++. .+.+|+.|+++|++++..++.+++..
T Consensus 302 ai~da~~La~~L~~~~~~~--------~~~~L~~Y~~~r~~~~~~~~~~s~~~ 346 (394)
T 1k0i_A 302 AASDVSTLYRLLLKAYREG--------RGELLERYSAICLRRIWKAERFSWWM 346 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHC--------CGGGGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccC--------chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999876542 14689999999999998888776543
No 16
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=1.2e-31 Score=301.34 Aligned_cols=347 Identities=15% Similarity=0.183 Sum_probs=223.4
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccc
Q 005770 73 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (678)
Q Consensus 73 ~~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~ 152 (678)
.+|+.+||+||||||+|+++|+.|+++|++|+|+|+.+.+.... +..+.+.+.++|+.+ |+++.+...+....
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~-----G~~l~p~~~~~l~~l--Gl~~~l~~~~~~~~ 91 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRV-----GESLLPGTMSILNRL--GLQEKIDAQNYVKK 91 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCC-----CCBCCHHHHHHHHHT--TCHHHHHHHCCEEE
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCce-----eeeECHHHHHHHHHc--CCcHHHHhcCCccc
Confidence 34567999999999999999999999999999999986543332 356899999999999 78888877654322
Q ss_pred cceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEe-CCeEEEEEc-CC
Q 005770 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDH-GDKVSVVLE-NG 228 (678)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~-~~~v~v~~~-dg 228 (678)
......+..........+.... ......+..+.++|..|.+.|.+.+ .+..++++++|++++.+ ++.+.|++. +|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G 170 (591)
T 3i3l_A 92 PSATFLWGQDQAPWTFSFAAPK-VAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGG 170 (591)
T ss_dssp CEEEEECSSSCCCEEEECCCC---CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETT
T ss_pred CCcEEEecCCCccceeeccccc-ccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCC
Confidence 2221111111111112221111 1112345578999999999999877 34568899999999875 566788887 67
Q ss_pred --cEEeccEEEEecCCCchhhhhhcCCCC-ccccccEEEEEEecC---CCCCcCCcceEEEecCceEEEEeeCCCCeEEE
Q 005770 229 --QCYAGDLLIGADGIWSKVRKNLFGPQE-AIYSGYTCYTGIADF---VPADIESVGYRVFLGHKQYFVSSDVGAGKMQW 302 (678)
Q Consensus 229 --~~i~a~~vVgADG~~S~VR~~l~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 302 (678)
++++||+||+|||.+|.+|+.++.... ..+.+ .++...... .+.+.....+. ...+.++++.+|..++.+.+
T Consensus 171 ~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~-~av~~~~~~~~~~~~~~~~~~~~-~~~~~G~~w~iPl~~~~~sv 248 (591)
T 3i3l_A 171 ESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRN-FAVWSYFKLKDPFEGDLKGTTYS-ITFEDGWVWMIPIKDDLYSV 248 (591)
T ss_dssp EEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEE-EEEEEEEECCCSCCSTTTTCEEE-EEETTEEEEEEECSSSEEEE
T ss_pred ceEEEEcCEEEECCCCcchhHHHcCCCCCCccccc-eEEEEEEecCccccCCCCCceEE-EEcCCcEEEEEECCCCeEEE
Confidence 589999999999999999998843221 22222 222222111 11222222232 33455667777877776555
Q ss_pred EEEEeCCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhh-hhhcccccCCCCccccCCcEEEEccccCCCCCCCcc
Q 005770 303 YAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEA-ILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQ 381 (678)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~Gq 381 (678)
.+........ .......+.+.+.+..+.+.+.+.+....... ....... .....+|..+|++|+|||||.++|+.||
T Consensus 249 ~~~~~~~~~~-~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~rvvLIGDAAh~~~Pl~Gq 326 (591)
T 3i3l_A 249 GLVVDRSKSA-EVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDW-SYDTEVFSADRFFLCGDAACFTDPLFSQ 326 (591)
T ss_dssp EEEEEGGGHH-HHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEE-EEEESCSEETTEEECGGGTCBCCGGGCC
T ss_pred EEEcCHHHHh-hhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEeccc-ccchhhcccCCEEEEccccccCCCcccc
Confidence 4443221100 00011223444444455555555443221100 0000011 1123467889999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 005770 382 GGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (678)
Q Consensus 382 G~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~ 437 (678)
|+|+|++||..|+++|...+.+. .....+++.|+++|++....+..+.+.
T Consensus 327 GinlAl~dA~~LA~~L~~~l~~~------~~~~~al~~Y~~~~~~~~~~i~~~~~~ 376 (591)
T 3i3l_A 327 GVHLASQSAVSAAAAIDRITRHG------DEKDAVHAWYNRTYREAYEQYHQFLAS 376 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCG------GGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC------chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887642 345778999999999999887766553
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=2.8e-31 Score=295.85 Aligned_cols=343 Identities=14% Similarity=0.157 Sum_probs=219.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHH-HHHhcChhHHHHHHHhcccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~-~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
+..+||+||||||+|+++|+.|+++|++|+|+|+.+.+.... +..+.+.... +++.+ |+++.+...+.....
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~l--gl~~~~~~~~~~~~~ 77 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQI-----GESLLPATVHGICAML--GLTDEMKRAGFPIKR 77 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCHHHHTTHHHHT--TCHHHHHTTTCCEEC
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCC-----CcccCcchHHHHHHHh--CcHHHHHHcCCcccc
Confidence 345899999999999999999999999999999986443332 2346676654 88888 788888765432221
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeE---EEEEcCC
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKV---SVVLENG 228 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v---~v~~~dg 228 (678)
.....+......+...+... .....+..+.++|..|.+.|.+.+ .+..++++++|+++..+++.+ ++...+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG 154 (512)
T 3e1t_A 78 GGTFRWGKEPEPWTFGFTRH---PDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEG 154 (512)
T ss_dssp EEEEECSSCSSCEEEESSSS---SSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSS
T ss_pred CceEEecCCccccccccccC---CCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCC
Confidence 11101111111112222211 112234578899999999999877 345689999999999988854 4555567
Q ss_pred c--EEeccEEEEecCCCchhhhhhcCCCCccccccEEEEEEecC---CCCCcCCcceEEEecCceEEEEeeCCCCeEEEE
Q 005770 229 Q--CYAGDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADF---VPADIESVGYRVFLGHKQYFVSSDVGAGKMQWY 303 (678)
Q Consensus 229 ~--~i~a~~vVgADG~~S~VR~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 303 (678)
+ +++||+||+|||.+|.+|+.++......+....++.+.... .+.......+..+. +.++++.+|..++...+.
T Consensus 155 ~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~~Pl~~~~~~vg 233 (512)
T 3e1t_A 155 VELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAF-QDGWFWYIPLSDTLTSVG 233 (512)
T ss_dssp CEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEE-TTEEEEEEECSSSEEEEE
T ss_pred CEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEe-CCceEEEEEeCCCeEEEE
Confidence 4 89999999999999999999832222222233444444321 12222222233333 455777778887766555
Q ss_pred EEEeCCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhh---hhhccccc--CCCCccccCCcEEEEccccCCCCCC
Q 005770 304 AFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEA---ILRRDIYD--RTPIFTWGRGRVTLLGDSVHAMQPN 378 (678)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~--~~~~~~~~~grv~LvGDAAH~~~P~ 378 (678)
+......... ... ..++.+..+..+.+.+.+.+....... +....+.. .....+|..+|++|||||||.++|+
T Consensus 234 ~~~~~~~~~~-~~~-~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~ 311 (512)
T 3e1t_A 234 AVVSREAAEA-IKD-GHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPV 311 (512)
T ss_dssp EEEEHHHHTT-TSS-CHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCST
T ss_pred EEecHHHhhh-hcC-CHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCc
Confidence 5443211000 011 123333333346666666554332110 00001110 0123467789999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHH
Q 005770 379 LGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (678)
Q Consensus 379 ~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~ 436 (678)
.|||+|+||+||..|++.|...+++. .+...+|+.|+++|+++...+.++..
T Consensus 312 ~GqG~~~Al~dA~~La~~L~~~l~~~------~~~~~aL~~Ye~~~~~~~~~~~~~~~ 363 (512)
T 3e1t_A 312 FSSGVHLATYSALLVARAINTCLAGE------MSEQRCFEEFERRYRREYGNFYQFLV 363 (512)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHTTTC------SCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHHHHcCC------ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987653 34578999999999999887766554
No 18
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.1e-31 Score=284.51 Aligned_cols=326 Identities=17% Similarity=0.126 Sum_probs=189.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
|+.|||+||||||+|+++|+.|+++|++|+|+||++.+..... . +-.++++ +|+.++ +......... ....
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~-~--g~~l~~~---~l~~l~--~~~~~~~~~~-~~~~ 72 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVR-C--GEGLSKG---ILNEAD--IKADRSFIAN-EVKG 72 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCC-S--CCEEETH---HHHHTT--CCCCTTTEEE-EESE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCc-e--ecccCHH---HHHHcC--CCchhhhhhc-ccce
Confidence 5679999999999999999999999999999999764322110 0 1235554 445552 2111000000 0000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEE--cCC--
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG-- 228 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~--~dg-- 228 (678)
.. +.. ..+.....+.. ...+...++.++|..|++.|.+.+. +..++++++++++..+++.+.... .++
T Consensus 73 ~~-~~~-~~~~~~~~~~~----~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~ 146 (397)
T 3oz2_A 73 AR-IYG-PSEKRPIILQS----EKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEI 146 (397)
T ss_dssp EE-EEC-TTCSSCEEEEC----SSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEE
T ss_pred EE-EEe-CCCceEeeccc----cccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccc
Confidence 00 111 11111111111 1122344789999999999998763 345889999999998888765332 233
Q ss_pred cEEeccEEEEecCCCchhhhhhcCC-CCccccccEEEEEEecCCCCCcCCcceEEEec---CceEEEEeeCCCCeEEEEE
Q 005770 229 QCYAGDLLIGADGIWSKVRKNLFGP-QEAIYSGYTCYTGIADFVPADIESVGYRVFLG---HKQYFVSSDVGAGKMQWYA 304 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~VR~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~w~~ 304 (678)
.+++||+||+|||++|.||+.++.. ....+......... .....+.......++.+ ++.+.+.++..++......
T Consensus 147 ~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~ 225 (397)
T 3oz2_A 147 VDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQY-RMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGI 225 (397)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEE-EEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEE
T ss_pred eEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEE-EeeccccCcccceeeeeccCCCceEEEeecccceeEEEE
Confidence 3789999999999999999998432 22233332222211 11112222233333332 3455556666555443333
Q ss_pred EEeCCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhh
Q 005770 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (678)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n 384 (678)
...... .. .......+++.+....+. +............+........|..+|++|+|||||.++|++|||+|
T Consensus 226 ~~~~~~--~~-~~~~~~~~l~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~ 298 (397)
T 3oz2_A 226 GSSINW--IH-NRFELKNYLDRFIENHPG----LKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIA 298 (397)
T ss_dssp EEETTT--SC-SHHHHHHHHHHHHHTCHH----HHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHH
T ss_pred eeccch--hh-hhhhHHHHHHHHHHhCcc----ccccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHH
Confidence 222211 11 112222222222212221 11111111111222222334467889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHH
Q 005770 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVA 429 (678)
Q Consensus 385 ~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~ 429 (678)
+||+||..||+.|.++++.+ +..+..|+.|+++++.+..
T Consensus 299 ~A~~~g~~~A~~i~~~l~~~------~~~~~~L~~Ye~~~~~~~~ 337 (397)
T 3oz2_A 299 NAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFE 337 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHH
Confidence 99999999999999988764 2237899999999887654
No 19
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.97 E-value=6.4e-32 Score=289.91 Aligned_cols=337 Identities=18% Similarity=0.188 Sum_probs=199.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHH-HH-HHHhcccccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVA-EE-VMRAGCVTGD 153 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~-~~-~~~~~~~~~~ 153 (678)
+||+||||||+|+++|+.|+++ |++|+|+|+.+.+.. .| .++.+++++++ ..++.+++ +. +...... ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~-~g---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~ 73 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEV-LG---WGVVLPGRPGQ--HPANPLSYLDAPERLNPQF-LE 73 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCC-CC---SEEEEESCTTT--CTTCGGGGSSCGGGGCCEE-EC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCc-ce---eEEEeCcHHHH--hhcCcchhhhhhHHHhhcc-cc
Confidence 4899999999999999999999 999999999865421 22 25667777666 22222343 22 2211110 01
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEE
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCY 231 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i 231 (678)
.+. +.. .+... . ...+.+ .+.+.|..|.+.|.+.+. +..++++++|+++++. +++
T Consensus 74 ~~~-~~~--~g~~~-~-------~~~~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~ 130 (381)
T 3c4a_A 74 DFK-LVH--HNEPS-L-------MSTGVL-LCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLA 130 (381)
T ss_dssp CEE-EEE--SSSEE-E-------CCCCSC-EEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGG
T ss_pred ceE-EEe--CCeeE-E-------ecCCCc-eeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccc
Confidence 111 111 12111 0 111233 368999999999998873 3468999999888642 136
Q ss_pred eccEEEEecCCCchhhhhhc---CCCCccccccEEEEEEecCCCCCcCCcceE-EEecCceEE-EEeeCCCCeEEEEEEE
Q 005770 232 AGDLLIGADGIWSKVRKNLF---GPQEAIYSGYTCYTGIADFVPADIESVGYR-VFLGHKQYF-VSSDVGAGKMQWYAFH 306 (678)
Q Consensus 232 ~a~~vVgADG~~S~VR~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~w~~~~ 306 (678)
+||+||+|||.+|. |+.+. +.....+....++.++.... ...... .+.+.+..+ ..+|..++...|....
T Consensus 131 ~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~ 205 (381)
T 3c4a_A 131 DYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF----DQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVEC 205 (381)
T ss_dssp GCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC----SSEEEEEEEETTEEEEEEEEECSSSCEEEEEEE
T ss_pred cCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCC----CcceeeEeeCCCcEEEEEEEEecCCeEEEEEEC
Confidence 89999999999999 99873 22211222334454442211 111111 123333322 3467766654433322
Q ss_pred eCCC---CCCC--CcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcc
Q 005770 307 KEPA---GGVD--GPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQ 381 (678)
Q Consensus 307 ~~~~---~~~~--~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~Gq 381 (678)
.... .... ......+.+.+.+..|.+.. +. ..... ..+.++...+..+|..|||+|+|||||.|+|++||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l---~~~~~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~Gq 280 (381)
T 3c4a_A 206 SEETYARARLGEMSEEASAEYVAKVFQAELGGH-GL---VSQPG-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGH 280 (381)
T ss_dssp CHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTC-CC---BCCTT-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCC
T ss_pred CccccccCCcccCChHHHHHHHHHHhcccCCCc-hh---hcCCC-cceeeeccccCCCcccCCEEEEEccccccCCCccc
Confidence 1100 0110 11122344445454432211 11 11111 12344444556789999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhhhhcCCCCccccccc
Q 005770 382 GGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTK 461 (678)
Q Consensus 382 G~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 461 (678)
|+|+||+||.+|+++|... .+.+.+|+.|+++|++++..++..++...........++. ..+.++.|+
T Consensus 281 G~~~al~Da~~La~~L~~~----------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~~~r~ 348 (381)
T 3c4a_A 281 GTTMAVVVAQLLVKALCTE----------DGVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMH--LSSAEFVQS 348 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHS----------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--------CHHHH
T ss_pred cHHHHHHHHHHHHHHHhcc----------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhc--CCHHHHHHH
Confidence 9999999999999999873 1347899999999999999998887655433222223333 366777888
Q ss_pred ccccC
Q 005770 462 FRIPH 466 (678)
Q Consensus 462 ~~l~~ 466 (678)
+.+..
T Consensus 349 ~~~~~ 353 (381)
T 3c4a_A 349 FDARR 353 (381)
T ss_dssp GGGTT
T ss_pred Hhhcc
Confidence 77765
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.97 E-value=4.5e-31 Score=289.85 Aligned_cols=331 Identities=15% Similarity=0.100 Sum_probs=198.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.+..+.... +..+ +.+.|+.+ |+.+.............
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~--g~~l---~~~~l~~l--g~~~~~~~~~~~~~~~~ 77 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPC--GDAV---SKAHFDKL--GMPYPKGEELENKINGI 77 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCC--CCEE---EHHHHHHT--TCCCCCGGGEEEEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccc--cccc---cHHHHHHh--cCCCCchHHHHhhhcce
Confidence 35899999999999999999999999999999986542111100 1123 45667776 33221100000000000
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEE-EEEc---CCc
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLE---NGQ 229 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~-v~~~---dg~ 229 (678)
. +... .+.....+ ...++.++|..|++.|.+.+ .+..++++++|+++..+++.+. |++. +|+
T Consensus 78 ~-~~~~-~~~~~~~~----------~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~ 145 (453)
T 3atr_A 78 K-LYSP-DMQTVWTV----------NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNE 145 (453)
T ss_dssp E-EECT-TSSCEEEE----------EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTE
T ss_pred E-EECC-CCceEEeE----------CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCc
Confidence 0 0110 01000110 01257899999999999886 3456899999999999888765 5554 676
Q ss_pred --EEeccEEEEecCCCchhhhhhcCCC---Cccc--cccEEEEEEecCCCCCcCCcceEEEec----CceEEEEeeCCCC
Q 005770 230 --CYAGDLLIGADGIWSKVRKNLFGPQ---EAIY--SGYTCYTGIADFVPADIESVGYRVFLG----HKQYFVSSDVGAG 298 (678)
Q Consensus 230 --~i~a~~vVgADG~~S~VR~~l~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 298 (678)
+++||+||+|||.+|.+|+.++... ...+ ....++..+..............++++ ++++++.+|..++
T Consensus 146 ~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~ 225 (453)
T 3atr_A 146 ELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKN 225 (453)
T ss_dssp EEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETT
T ss_pred eEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCC
Confidence 8999999999999999999884322 1112 112344443322111111122234443 3556667777777
Q ss_pred eEEEEEEEeCCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCC
Q 005770 299 KMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPN 378 (678)
Q Consensus 299 ~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~ 378 (678)
.+.+.+....... .....+.+.+.+..+.+.+ ............+....+..+|..+|++|+|||||.++|+
T Consensus 226 ~~~vg~~~~~~~~----~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~ 297 (453)
T 3atr_A 226 KVNVGLGIQGGMG----YPSIHEYYKKYLDKYAPDV----DKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPV 297 (453)
T ss_dssp EEEEEEEEESSSC----CCCHHHHHHHHHHHHCTTE----EEEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTT
T ss_pred eEEEEEEecCCCC----CCCHHHHHHHHHHhhhhhc----CCCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCC
Confidence 6655544432211 1112233333322111100 0000000011122223456678899999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 005770 379 LGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (678)
Q Consensus 379 ~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~~~ 439 (678)
+|||+|+||+||..||++|..+++.+. ...++|+.|+++|+++....+..++.+.
T Consensus 298 ~G~G~~~Ai~da~~la~~l~~~l~~~~------~~~~~L~~Y~~~r~~~~~~~~~~~~~~~ 352 (453)
T 3atr_A 298 HGGGKGSAMISGYCAAKAILSAFETGD------FSASGLWDMNICYVNEYGAKQASLDIFR 352 (453)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTC------CSTTTTTHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCC------ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998876421 1246899999999999887766554433
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.97 E-value=2.9e-29 Score=270.62 Aligned_cols=333 Identities=16% Similarity=0.092 Sum_probs=199.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
|..+||+||||||+|+++|+.|+++|++|+|+|+.+....... . +-.+.+ +.++.+ |+++...... .....
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~-~--~~~~~~---~~~~~l--g~~~~~~~~~-~~~~~ 72 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVR-C--GEGLSK---GILNEA--DIKADRSFIA-NEVKG 72 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCC-S--CCEEET---HHHHHT--TCCCCTTTEE-EEESE
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcc-c--ccccCH---HHHHHc--CCCCChHHhh-hhcce
Confidence 3468999999999999999999999999999999864321111 0 112332 456666 4422210000 00001
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEE-EEEc---CC
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLE---NG 228 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~-v~~~---dg 228 (678)
+. +.+. .+.....++. ...+.+.++.++|..|++.|.+.+. +..++++++|++++.+++.++ |++. ++
T Consensus 73 ~~-~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~ 146 (397)
T 3cgv_A 73 AR-IYGP-SEKRPIILQS----EKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEI 146 (397)
T ss_dssp EE-EECT-TCSSCEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEE
T ss_pred EE-EEcC-CCCEEEEEec----cccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeE
Confidence 11 1111 1111012211 1112345789999999999998763 346889999999999988887 7773 45
Q ss_pred cEEeccEEEEecCCCchhhhhhcCCC-Ccccccc-EEEEEEecCCCCCcCCcceEEEe---cCceEEEEeeCCCCeEEEE
Q 005770 229 QCYAGDLLIGADGIWSKVRKNLFGPQ-EAIYSGY-TCYTGIADFVPADIESVGYRVFL---GHKQYFVSSDVGAGKMQWY 303 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~VR~~l~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~w~ 303 (678)
++++||+||+|||.+|.+|+.++... ....... .++...... ...+.....+++ .++++++.+|..++...+.
T Consensus 147 ~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg 224 (397)
T 3cgv_A 147 VDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMIN--VDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVG 224 (397)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEES--CCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEE
T ss_pred EEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEecc--CCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEE
Confidence 68999999999999999999984322 2111111 122222111 122233344444 3556677777777665544
Q ss_pred EEEeCCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchh
Q 005770 304 AFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGG 383 (678)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~ 383 (678)
+....... . ......+.++.+..+.+.+ ............+.......+|..+|++|+|||||.++|++|||+
T Consensus 225 ~~~~~~~~--~-~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~ 297 (397)
T 3cgv_A 225 IGSSINWI--H-NRFELKNYLDRFIENHPGL----KKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGI 297 (397)
T ss_dssp EEEETTTC--S-CHHHHHHHHHHHHHTCHHH----HTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCH
T ss_pred EEeccccc--c-CCCCHHHHHHHHHHhCcCC----CCCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCH
Confidence 43332211 1 1122222322222222211 111111111111222234567889999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 005770 384 CMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (678)
Q Consensus 384 n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~~ 437 (678)
|+|++||..|++.|.+.+..+ ......|+.|+++|++.....+..++.
T Consensus 298 ~~a~~~a~~la~~l~~~~~~~------~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 345 (397)
T 3cgv_A 298 ANAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFERKHLRNWV 345 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999887543 123688999999999987766555443
No 22
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.97 E-value=2.7e-29 Score=273.22 Aligned_cols=333 Identities=16% Similarity=0.127 Sum_probs=210.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.+.... +..+.+.+++.|+.+ |+++.+.+.+.......
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~-----g~~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~ 76 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVI-----GESLLPRCMEHLDEA--GFLDAVKAQGFQQKFGA 76 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCGGGHHHHHHT--TCHHHHHHTTCEEECEE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc-----cCcccHhHHHHHHHc--CChHHHHHcCCcccCCc
Confidence 45899999999999999999999999999999986543322 346889999999999 78888877654322222
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEE--EEEcCCc--
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS--VVLENGQ-- 229 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~--v~~~dg~-- 229 (678)
. +... .....++... ......+..+.++|..|.+.|.+.+. +..++++++|++++.+++++. +...+|+
T Consensus 77 ~-~~~~---~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~ 151 (421)
T 3nix_A 77 K-FVRG---KEIADFNFSD-QFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKR 151 (421)
T ss_dssp E-EEET---TEEEEEETTS-CSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEE
T ss_pred E-EEeC---CeeEEEeehh-hcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEE
Confidence 1 1111 1111111111 11122345689999999999998762 346889999999999888754 4457787
Q ss_pred EEeccEEEEecCCCchhhhhhcCCCC-ccccccEEEEEE-ecCCC-CCcCCcceEEEe---cCceEEEEeeCCCCeEEEE
Q 005770 230 CYAGDLLIGADGIWSKVRKNLFGPQE-AIYSGYTCYTGI-ADFVP-ADIESVGYRVFL---GHKQYFVSSDVGAGKMQWY 303 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~VR~~l~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~w~ 303 (678)
+++||+||+|||.+|.+|+.++.... ..+.. .++... ....+ .........++. .+..+++.+|..++...+.
T Consensus 152 ~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg 230 (421)
T 3nix_A 152 EIEARFIIDASGYGRVIPRMFGLDKPSGFESR-RTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVG 230 (421)
T ss_dssp EEEEEEEEECCGGGCHHHHHTTCEECCSSCCC-EEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEE
T ss_pred EEEcCEEEECCCCchhhHHhcCCCCCCcCCCc-EEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEE
Confidence 79999999999999999998843222 22333 333322 22111 111111112222 2455677778877765544
Q ss_pred EEEeCCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChh-hhhhcccccCCCCccccCCcEEEEccccCCCCCCCcch
Q 005770 304 AFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQG 382 (678)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG 382 (678)
+........ . .....+++++.+..+.+.+.+.+...... .+..+..+ .....+|..+|++|+|||||.++|+.|||
T Consensus 231 ~~~~~~~~~-~-~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~v~lvGDAa~~~~P~~G~G 307 (421)
T 3nix_A 231 FVGEPSYFD-E-YTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGY-AISASKLYGDGFVLTGNATEFLDPIFSSG 307 (421)
T ss_dssp EEECHHHHT-T-SCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECC-CBEESCSEETTEEECGGGTCBCCSTTCCH
T ss_pred EEecHHHhh-h-cCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeeccc-ceeeeeeccCCEEEecccccccCCccccc
Confidence 433211000 0 01123334444434445444544433221 11111111 12234677899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHhHHHHHHH
Q 005770 383 GCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIH 432 (678)
Q Consensus 383 ~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~ 432 (678)
+|+|++||..|++.|.+.+++.. ...++.|+++++.......
T Consensus 308 ~~~A~~~a~~la~~l~~~~~~~~--------~~~~~~y~~~~~~~~~~~~ 349 (421)
T 3nix_A 308 ATFAMESGSKGGKLAVQFLKGEE--------VNWEKDFVEHMMQGIDTFR 349 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--------CCHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCc--------hhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877531 2367789998887665443
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.96 E-value=3.9e-27 Score=263.21 Aligned_cols=328 Identities=10% Similarity=0.049 Sum_probs=195.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH------------cCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHH
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR------------KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE 143 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~------------~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~ 143 (678)
..+||+||||||+|+++|+.|++ .|++|+|||+...+..+. +..+.++++++|+.+ |+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~-----g~~~~p~~~~~l~~l--Gi~e~ 78 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGV-----GEGTWPSMRSTLSKI--GIDEN 78 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCS-----CEECCTHHHHHHHHH--TCCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcce-----eeechHhHHHHHHHc--CCCHH
Confidence 46899999999999999999999 999999999875443222 356889999999999 67775
Q ss_pred --HHHhccccccceeeeeecCC------Cce-eeeccC--------C---------C-----------------------
Q 005770 144 --VMRAGCVTGDRINGLVDGIS------GSW-YIKFDT--------F---------T----------------------- 174 (678)
Q Consensus 144 --~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~--------~---------~----------------------- 174 (678)
+.+.+......+. +.+... +.. ...+.. . .
T Consensus 79 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~ 157 (526)
T 2pyx_A 79 DFIRQCDASFKQGSR-FINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSI 157 (526)
T ss_dssp HHHHHTTCEEECEEE-EESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCT
T ss_pred HHHHHcCCEEECCCc-ccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhh
Confidence 5544322111111 100000 000 000000 0 0
Q ss_pred --cccccCCCeEEEeCHHHHHHHHHHhcC---CceEEeCCeEEEEEEeCCe--EEEEEcCCcEEeccEEEEecCCCchh-
Q 005770 175 --PAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKV- 246 (678)
Q Consensus 175 --~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~~~~~~~~--v~v~~~dg~~i~a~~vVgADG~~S~V- 246 (678)
.......+..+.++|..|.+.|.+.+. +..++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 158 ~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~ 236 (526)
T 2pyx_A 158 VTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLL 236 (526)
T ss_dssp TSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCC
T ss_pred hccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHH
Confidence 000011234689999999999988763 3467788 69999887554 46777887789999999999999999
Q ss_pred hhhhcCCCCcc----ccccEEEEEEecCCC--CCcCCcceEEEecCceEEEEeeCCCCeEEEEEEEeCCCCCCCCcchhH
Q 005770 247 RKNLFGPQEAI----YSGYTCYTGIADFVP--ADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKK 320 (678)
Q Consensus 247 R~~l~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 320 (678)
|+.++ ..... +.....+........ .......... ....++++.+|..+.....+.+. +. . .......
T Consensus 237 ~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~pl~~~~~~~~v~~--~~-~-~~~~~~~ 310 (526)
T 2pyx_A 237 GEHLQ-VPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHST-AQPNGWIWDIGLPTRKGVGYVYS--SS-H-TNDIDAQ 310 (526)
T ss_dssp CCCTC-CCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEE-EETTEEEEEEECSSEEEEEEEEC--TT-T-CCHHHHH
T ss_pred HHHhC-CCcccccccccCccEEEEEeeccCCCCCCCCceeEE-ecCCCeEEEeeCCCceEEEEEec--CC-C-CChHHHH
Confidence 45443 21111 111122221111111 1111111122 23344566666655332222211 11 1 1112233
Q ss_pred HHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 005770 321 ERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKA 400 (678)
Q Consensus 321 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~ 400 (678)
+.+.+.+..+.+. +..... ..+.+.. ....+|..+||+|+|||||.++|+.|||+|+|++||..|++.|...
T Consensus 311 ~~l~~~l~~~~~~----l~~~~~---~~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~ 382 (526)
T 2pyx_A 311 KTLFNYLGVDGAA----ADKLEP---RQLAINP-GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN 382 (526)
T ss_dssp HHHHHHHTCCHHH----HHHCCC---EEEECCC-EEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHhcCcc----cccCCc---eEEeccc-CccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc
Confidence 4455555444221 211111 1111111 1234577899999999999999999999999999999998877521
Q ss_pred hhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHH
Q 005770 401 CKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 435 (678)
Q Consensus 401 ~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~ 435 (678)
....+.+|++|+++|+++..++.++.
T Consensus 383 ---------~~~~~~~l~~Y~~~~~~~~~~~~~~~ 408 (526)
T 2pyx_A 383 ---------RMVMDTISARVNERYQQHWQQIIDFL 408 (526)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12347899999999999988776543
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.95 E-value=8e-27 Score=262.93 Aligned_cols=328 Identities=13% Similarity=0.052 Sum_probs=188.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc------CCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGC 149 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~------g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~ 149 (678)
..+||+||||||+||++|+.|+++ |++|+|+||.+.+..... .+..+.+++++.| + +-+. +.+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~---~g~~l~~~~l~~l--l--~~~~---~~g~ 103 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL---SGACLDPRAFEEL--F--PDWK---EKGA 103 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCC---CCCEECTHHHHHH--C--TTHH---HHTC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccc---cccccCHHHHHHH--H--HHHH---hcCC
Confidence 358999999999999999999999 999999999865422111 1335788887765 3 2222 2221
Q ss_pred ccccce----eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCC-eEE
Q 005770 150 VTGDRI----NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVS 222 (678)
Q Consensus 150 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~-~v~ 222 (678)
.....+ ..+.... + ...++... ......+..+.++|..|+++|.+.+. +..++++++|+++..+++ .+.
T Consensus 104 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~-~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~ 179 (584)
T 2gmh_A 104 PLNTPVTEDRFGILTEK-Y--RIPVPILP-GLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVK 179 (584)
T ss_dssp CCCEECCEEEEEEECSS-C--EEECCCCT-TSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEE
T ss_pred ceeeeechhheeeeccC-C--CccccccC-ccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEE
Confidence 111100 0011111 1 11221000 00011112478999999999998773 356899999999998764 354
Q ss_pred -EEEc------CC---------cEEeccEEEEecCCCchhhhhhc---CCC-Ccccccc-EEEEEEecCCCCCcCCcceE
Q 005770 223 -VVLE------NG---------QCYAGDLLIGADGIWSKVRKNLF---GPQ-EAIYSGY-TCYTGIADFVPADIESVGYR 281 (678)
Q Consensus 223 -v~~~------dg---------~~i~a~~vVgADG~~S~VR~~l~---~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 281 (678)
|++. +| .+++||+||+|||.+|.||+.+. +.. ...+..+ ..+..+..............
T Consensus 180 gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~ 259 (584)
T 2gmh_A 180 GIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVD 259 (584)
T ss_dssp EEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEE
T ss_pred EEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEE
Confidence 6665 33 68999999999999999999872 221 1111110 12222221111111111122
Q ss_pred EEec-------CceEEEEeeCC--CCeEEEEEEEeCCCCCCCCcchhHHHHHHHhccCChhHHHHHHcCChhhhhhcccc
Q 005770 282 VFLG-------HKQYFVSSDVG--AGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIY 352 (678)
Q Consensus 282 ~~~~-------~~~~~~~~~~~--~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (678)
.+.+ .+..+ .++.. ++.+.+.+......... .....+.+.+... .+.+.+.+.......+....++
T Consensus 260 ~~~g~~~~~~~~gg~~-~~~~~~~~~~~~vg~~~~~~~~~~--~~~~~~~l~~~~~--~p~i~~~l~~~~~~~~~~~~~~ 334 (584)
T 2gmh_A 260 HTVGWPLDRHTYGGSF-LYHLNEGEPLLALGFVVGLDYQNP--YLSPFREFQRWKH--HPSIKPTLEGGKRIAYGARALN 334 (584)
T ss_dssp EEEETTSCTTSCEEEE-EEECCSSSCEEEEEEEEETTCCCT--TCCHHHHHHHHTT--STTTHHHHTTCEEEEEEEEEEE
T ss_pred EEEeccccCCcCCceE-EEEecCCCCeEEEEEEEecCcccc--cCChHHHHHHHHh--ChHHHHHhCCCeEEEecceEcc
Confidence 2221 12223 33444 55555554443322111 1113344444332 2334444432211111111111
Q ss_pred --cCCCCccccCCcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHH---HHHHHHHHHhHH
Q 005770 353 --DRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVS---ALKSYERARRLR 427 (678)
Q Consensus 353 --~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~---~L~~Ye~eRr~~ 427 (678)
......+|..+|++|+|||||.++|+.|||+|+||+||.+||++|..+++.+. ..... +|++|+++|++.
T Consensus 335 ~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~-----~~~~~a~~~L~~Ye~~r~~~ 409 (584)
T 2gmh_A 335 EGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSEN-----LQSKTIGLHVTEYEDNLKNS 409 (584)
T ss_dssp CCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCC-----CCCSSSSCCCTHHHHHHHTS
T ss_pred CCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCC-----cchhhhhhhHHHHHHHHHHh
Confidence 12235578899999999999999999999999999999999999999875320 00123 389999999986
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.94 E-value=1.5e-25 Score=249.80 Aligned_cols=324 Identities=12% Similarity=0.026 Sum_probs=186.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHH---cCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHH--HHHhcccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE--VMRAGCVT 151 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~---~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~--~~~~~~~~ 151 (678)
.+||+|||||++|+++|+.|++ +|++|+|||+...+..+. +..+.+..+++++.+ |+.+. +.......
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~-----g~~~~~~~~~~l~~l--gi~~~~~~~~~~~~~ 74 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGV-----GEATFSTVRHFFDYL--GLDEREWLPRCAGGY 74 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------C-----CEECCTTHHHHHHHH--TCCHHHHHHHTTCEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceee-----ccccCcchHHHHHHc--CCCHHHHHHHcCCeE
Confidence 3699999999999999999999 999999999975433222 345778888999998 56553 44332111
Q ss_pred ccceeeeeecC-CCc-eeeecc--------------------------------------CCC---ccccc---------
Q 005770 152 GDRINGLVDGI-SGS-WYIKFD--------------------------------------TFT---PAAEK--------- 179 (678)
Q Consensus 152 ~~~~~~~~~~~-~~~-~~~~~~--------------------------------------~~~---~~~~~--------- 179 (678)
...+. +.+.. .+. ....+. ... .....
T Consensus 75 ~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (511)
T 2weu_A 75 KLGIR-FENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLG 153 (511)
T ss_dssp ECEEE-EESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CC
T ss_pred eccce-ecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCcccccccccc
Confidence 11100 00000 000 000000 000 00000
Q ss_pred -------C--CCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCe--EEEEEcCCcEEeccEEEEecCCCchh
Q 005770 180 -------G--LPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKV 246 (678)
Q Consensus 180 -------~--~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~--v~v~~~dg~~i~a~~vVgADG~~S~V 246 (678)
. .+..+.++|..|.+.|.+.+. +..++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 154 RSTLAEQRAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp SCCGGGCCSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred ccccccCcCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 1 345689999999999998762 3467888 99999986655 67888889899999999999999999
Q ss_pred hhhhcCCCC-----ccccccEEEEEEecCC-CCCcCCcceEEEecCceEEEEeeCCCCeEEEEEEEeCCCCCCCCcchhH
Q 005770 247 RKNLFGPQE-----AIYSGYTCYTGIADFV-PADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKK 320 (678)
Q Consensus 247 R~~l~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 320 (678)
|+.+.+... ..+.. ..+....... +........ ....+.++++.+|..+ ...+..... . .. .......
T Consensus 233 ~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~P~~~-~~~~g~~~~-~-~~-~~~~~~~ 306 (511)
T 2weu_A 233 INQTLGGRFQSFSDVLPNN-RAVALRVPRENDEDMRPYTT-ATAMSAGWMWTIPLFK-RDGNGYVYS-D-EF-ISPEEAE 306 (511)
T ss_dssp CCCCTCCCEEECTTTCCCC-EEEEEEEECSSGGGCCSSEE-EEEETTEEEEEEECSS-EEEEEEEEC-T-TT-SCHHHHH
T ss_pred HHHHhCCCCccccccCccc-ceEEEEeccCCCCCCCccee-ceecCCCcEEEEECCC-ceEEEEEEC-C-CC-CCHHHHH
Confidence 765532211 11111 2221111111 100111112 2233445566666655 222222221 1 11 1111222
Q ss_pred HHHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 005770 321 ERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKA 400 (678)
Q Consensus 321 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~ 400 (678)
+.+.+.+. +.+. ....... .+. .....+|..+|++|+|||||.++|+.|||+|+|++||..|++.|..
T Consensus 307 ~~l~~~~~-~~~~-------~~~~~~~--~~~-~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~- 374 (511)
T 2weu_A 307 RELRSTVA-PGRD-------DLEANHI--QMR-IGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG- 374 (511)
T ss_dssp HHHHHHHC-TTCT-------TSCCEEE--ECC-CEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC-
T ss_pred HHHHHHhC-cccc-------cccceeE--Eee-ccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc-
Confidence 23333331 1111 0000111 111 0122356679999999999999999999999999999999988752
Q ss_pred hhccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHH
Q 005770 401 CKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (678)
Q Consensus 401 ~~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~ 436 (678)
+ ...+.+|+.|+++|+++...+..+..
T Consensus 375 --~-------~~~~~~l~~Y~~~~~~~~~~~~~~~~ 401 (511)
T 2weu_A 375 --E-------RWDPVLISAYNERMAHMVDGVKEFLV 401 (511)
T ss_dssp --T-------TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --C-------CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12367899999999999887765543
No 26
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=4.1e-26 Score=248.41 Aligned_cols=325 Identities=18% Similarity=0.170 Sum_probs=182.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
+.+||+||||||+|+++|+.|+++|++|+|+|+.+.+....|.......+...++..++.++.+.|..... ......
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~- 97 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEF--GYFGHY- 97 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHH--CEEEEE-
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcc--ccccee-
Confidence 34799999999999999999999999999999986433222221122345667788887775444433211 111111
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCC-eEEEEEEeCCeEEEEEcCCcEEe
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNES-NVIDFKDHGDKVSVVLENGQCYA 232 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~-~v~~~~~~~~~v~v~~~dg~~i~ 232 (678)
+...... ...+.. .. ....+.+++..+.+.|.+.+. +..+++.. ++.+++ .....
T Consensus 98 --~~~~~~~--~~~~~~-----~~-~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~ 155 (430)
T 3ihm_A 98 --YYVGGPQ--PMRFYG-----DL-KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQ 155 (430)
T ss_dssp --EEECSSS--CEEEEE-----EE-EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTT
T ss_pred --EEECCCC--ccccch-----hc-CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhccc
Confidence 1111110 111110 00 112468899999999988763 22333311 011110 01236
Q ss_pred ccEEEEecCCCchhhhhhcCCCCc--cccccEEEEEEe-cCCCCCcCCcceEEEecCceEEEEee-CCCCeEEEEEEEeC
Q 005770 233 GDLLIGADGIWSKVRKNLFGPQEA--IYSGYTCYTGIA-DFVPADIESVGYRVFLGHKQYFVSSD-VGAGKMQWYAFHKE 308 (678)
Q Consensus 233 a~~vVgADG~~S~VR~~l~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~w~~~~~~ 308 (678)
+|+||+|||.+|.+|......... .+.+........ ...+.+.....+..+.+.+..++... ..++...+++....
T Consensus 156 ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~ 235 (430)
T 3ihm_A 156 YDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENH 235 (430)
T ss_dssp SSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEec
Confidence 899999999999998544222111 222222222222 22222222334445555554444322 22344444443333
Q ss_pred CCCCC---------CCcchhHHHHHHHhccCChhHHHHHHcCC------hhhhhhccc--ccCCCCccccCCcEEE-Ecc
Q 005770 309 PAGGV---------DGPEGKKERLLKIFEGWCDNVVDLILATD------EEAILRRDI--YDRTPIFTWGRGRVTL-LGD 370 (678)
Q Consensus 309 ~~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~------~~~~~~~~~--~~~~~~~~~~~grv~L-vGD 370 (678)
+.... ..++...+.+.+.+..|.+.+.+.+.... ...+....+ ....+..+|..||++| +||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~GD 315 (430)
T 3ihm_A 236 IGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGLGD 315 (430)
T ss_dssp TTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEECGG
T ss_pred CCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeecccccccccCCCCEEEEecC
Confidence 32111 01222234666777777766655443332 111111011 1123456789999999 999
Q ss_pred ccCCCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHh-HHHHHHHHHH
Q 005770 371 SVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR-LRVAVIHGLA 435 (678)
Q Consensus 371 AAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Ye~eRr-~~~~~~~~~~ 435 (678)
|||.++|++|||+|+||+||.+|+++|... + +..++|.+|+.+|+ .++..+...+
T Consensus 316 Aah~~~p~~g~G~~~a~~da~~l~~~l~~~--~--------~~~~~~~~~~~~r~~~~~~~~~~~~ 371 (430)
T 3ihm_A 316 IQATVDPVLGQGANMASYAAWILGEEILAH--S--------VYDLRFSEHLERRRQDRVLCATRWT 371 (430)
T ss_dssp GTEECCGGGCCHHHHHHHHHHHHHHHHHHC--S--------CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCchhhhHHHHHHHHHHHHHHHHhc--C--------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875 1 13688999999999 5555444443
No 27
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.94 E-value=1.6e-25 Score=250.95 Aligned_cols=324 Identities=11% Similarity=0.056 Sum_probs=188.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH---cCCcEEEEecccccccCCcccccceeeChhHHH-HHHhcChhHHHH--HHHhcc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEE--VMRAGC 149 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~---~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~-~L~~l~~gl~~~--~~~~~~ 149 (678)
..+||+|||||++|+++|+.|++ .|++|+|||+...+..+. +..+.+++.+ +++.+ |+.+. +.....
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~l--G~~~~~~~~~~~~ 76 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGV-----GEATIPSLQKVFFDFL--GIPEREWMPQVNG 76 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCS-----CEECCTHHHHHTHHHH--TCCHHHHGGGGTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCC-----CcccchhHHHHHHHHh--CCCHHHHHHhcCc
Confidence 45899999999999999999999 999999999965433222 3557888888 89988 55443 322211
Q ss_pred cccc--ceeeeeecC----CCceeeeccC----------------------CC-----------------c---ccccCC
Q 005770 150 VTGD--RINGLVDGI----SGSWYIKFDT----------------------FT-----------------P---AAEKGL 181 (678)
Q Consensus 150 ~~~~--~~~~~~~~~----~~~~~~~~~~----------------------~~-----------------~---~~~~~~ 181 (678)
.... .+..+.... .......+.. .. + ......
T Consensus 77 ~~~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (538)
T 2aqj_A 77 AFKAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQM 156 (538)
T ss_dssp EEECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCS
T ss_pred hhhCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCC
Confidence 1110 000000000 0000000000 00 0 000013
Q ss_pred CeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCe--EEEEEcCCcEEeccEEEEecCCCchhhhhhcCCCCcc
Q 005770 182 PVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEAI 257 (678)
Q Consensus 182 ~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~--v~v~~~dg~~i~a~~vVgADG~~S~VR~~l~~~~~~~ 257 (678)
+..+.++|..|.+.|.+.+. +..++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+|+.+.+.....
T Consensus 157 ~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~ 235 (538)
T 2aqj_A 157 SHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFID 235 (538)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEE
T ss_pred CccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccc
Confidence 45789999999999998762 3457778 89999886554 5688888889999999999999999976653322111
Q ss_pred cc----ccEEEEEEecCCCC--CcCCcceEEEecCceEEEEeeCCCCeEEEEEEEeCCCCCCCCcchhHHHHHHHhccCC
Q 005770 258 YS----GYTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWC 331 (678)
Q Consensus 258 ~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (678)
+. ...++......... ..... ......+.++++.+|..+.....+. +. . . ........+.+.+.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~p~~~~~~~g~v-~~-~-~-~~~~~~~~~~l~~~~~~~- 309 (538)
T 2aqj_A 236 MSDYLLCDSAVASAVPNDDARDGVEPY-TSSIAMNSGWTWKIPMLGRFGSGYV-FS-S-H-FTSRDQATADFLKLWGLS- 309 (538)
T ss_dssp CTTTCCCCEEEEEEEECCHHHHCCCSS-EEEEECSSEEEEEEEETTEEEEEEE-EC-T-T-TSCHHHHHHHHHHHHTCC-
T ss_pred cccccccceEEEEecccCCcccCCCCc-eeeeecCCceEEEecCCCceEEEEE-Ec-C-C-CCChHHHHHHHHHHhcCC-
Confidence 11 11222211111000 01111 1122334455666666553222121 21 1 1 111122223333333321
Q ss_pred hhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChh
Q 005770 332 DNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPI 411 (678)
Q Consensus 332 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~~~~~~~~~~ 411 (678)
+ + .. .. .+.+.. ....+|..+||+|+|||||.++|+.|||+|+|++||..|++.|.. + .
T Consensus 310 ~-~------~~-~~--~~~~~~-~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~---~-------~ 368 (538)
T 2aqj_A 310 D-N------QP-LN--QIKFRV-GRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD---T-------S 368 (538)
T ss_dssp T-T------CC-CE--EEECCC-EEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB---T-------T
T ss_pred C-C------CC-ce--EEeecc-ccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc---c-------C
Confidence 0 0 01 01 111111 123457789999999999999999999999999999999987641 1 1
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHH
Q 005770 412 DIVSALKSYERARRLRVAVIHGL 434 (678)
Q Consensus 412 ~~~~~L~~Ye~eRr~~~~~~~~~ 434 (678)
..+.+|+.|+++|+++..++..+
T Consensus 369 ~~~~~l~~Y~~~~~~~~~~~~~~ 391 (538)
T 2aqj_A 369 FDPRLSDAFNAEIVHMFDDCRDF 391 (538)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 23678999999999998776543
No 28
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.94 E-value=3e-25 Score=249.07 Aligned_cols=327 Identities=11% Similarity=0.058 Sum_probs=189.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH---cCCcEEEEecccccccCCcccccceeeChhHHH-HHHhcChhHHHH--HHHhcc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEE--VMRAGC 149 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~---~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~-~L~~l~~gl~~~--~~~~~~ 149 (678)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.+..+. +..+.+++.+ +++.+ |+.+. +.....
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~p~~~~~~l~~l--Gi~~~~~~~~~~~ 96 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGV-----GEATIPNLQTAFFDFL--GIPEDEWMRECNA 96 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCC-----CEECCTHHHHHTHHHH--TCCHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccce-----eeeechhHHHHHHHHh--CCChHHHHHhcCC
Confidence 46899999999999999999999 999999999975433222 3467888999 99998 56554 443322
Q ss_pred ccccceee-eeecC-------------CCceeeeccC----------------------C-C---c------ccc-----
Q 005770 150 VTGDRING-LVDGI-------------SGSWYIKFDT----------------------F-T---P------AAE----- 178 (678)
Q Consensus 150 ~~~~~~~~-~~~~~-------------~~~~~~~~~~----------------------~-~---~------~~~----- 178 (678)
.....+.. .+... .......+.. . . . ...
T Consensus 97 ~~~~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 176 (550)
T 2e4g_A 97 SYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSP 176 (550)
T ss_dssp EEECEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCS
T ss_pred eEEEeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhh
Confidence 11111100 01100 0000011100 0 0 0 000
Q ss_pred ------cCCCeEEEeCHHHHHHHHHHhcC---CceEEeCCeEEEEEEeCCe--EEEEEcCCcEEeccEEEEecCCCchhh
Q 005770 179 ------KGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVR 247 (678)
Q Consensus 179 ------~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~~~~~~~~--v~v~~~dg~~i~a~~vVgADG~~S~VR 247 (678)
...++.+.+++..|.+.|.+.+. +..++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~ 255 (550)
T 2e4g_A 177 RRLDGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLI 255 (550)
T ss_dssp BCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCC
T ss_pred HhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhH
Confidence 02345788999999999998762 4568888 99999886555 678888898999999999999999995
Q ss_pred hhhcCCCCcccc----ccEEEEEEecCCCC--CcCCcceEEEecCceEEEEeeCCCCeEEEEEEEeCCCCCCCCcchhHH
Q 005770 248 KNLFGPQEAIYS----GYTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKE 321 (678)
Q Consensus 248 ~~l~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 321 (678)
+.+.+.....+. ....+......... ..... ......+.++++..|..+. ....... .. . ........+
T Consensus 256 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~ipl~~~-~~~g~v~-~~-~-~~~~~~~~~ 330 (550)
T 2e4g_A 256 NKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPF-TSAIAMKSGWTWKIPMLGR-FGTGYVY-SS-R-FATEDEAVR 330 (550)
T ss_dssp CCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSS-EEEEECSSEEEEEEECSSE-EEEEEEE-CT-T-TSCHHHHHH
T ss_pred HHHhCCCcccccccccccceEEEeecccCCcccCCCc-eeeeecCCceEEEccCCCc-cceEEEE-ec-C-CCChHHHHH
Confidence 544222211111 11111111111000 01111 1122234455555565542 2221111 11 1 111112223
Q ss_pred HHHHHhccCChhHHHHHHcCChhhhhhcccccCCCCccccCCcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHHh
Q 005770 322 RLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 401 (678)
Q Consensus 322 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~~ 401 (678)
.+.+.+... +.+ ...... . .......++..+|++|||||||.++|+.|||+|+|++||..|++.|..
T Consensus 331 ~l~~~~~~~-p~l-------~~~~~i--~-~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~-- 397 (550)
T 2e4g_A 331 EFCEMWHLD-PET-------QPLNRI--R-FRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD-- 397 (550)
T ss_dssp HHHHHTTCC-TTT-------SCCEEE--E-CCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC--
T ss_pred HHHHhhCcC-ccc-------CCCceE--E-ecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc--
Confidence 333333221 100 000111 1 111123346679999999999999999999999999999999987742
Q ss_pred hccCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHH
Q 005770 402 KKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (678)
Q Consensus 402 ~~~~~~~~~~~~~~~L~~Ye~eRr~~~~~~~~~~~ 436 (678)
+ ...+.+|++|+++|+++...+.++..
T Consensus 398 -~-------~~~~~~l~~Y~~~~~~~~~~i~~~~~ 424 (550)
T 2e4g_A 398 -K-------SLNPVLTARFNREIETMFDDTRDFIQ 424 (550)
T ss_dssp -T-------TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -c-------CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12368999999999999987766544
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.87 E-value=6.6e-22 Score=218.76 Aligned_cols=137 Identities=23% Similarity=0.207 Sum_probs=102.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
...+||+||||||+|+++|+.|+++|++|+|||+.+..... ....+.+.+++.|+.+ |+++.. + .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-----~~~~~~~~~~~~l~~~--g~~~~~---~-----~ 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-----NVLHLWPFTIHDLRAL--GAKKFY---G-----R 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-----CEEECCHHHHHHHHTT--THHHHC---T-----T
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-----CcccCChhHHHHHHHc--CCcccc---c-----c
Confidence 35689999999999999999999999999999998643211 1356788899999988 564321 0 0
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEe---CCeEEEEE--c-
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDH---GDKVSVVL--E- 226 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~---~~~v~v~~--~- 226 (678)
+.. . + ...+++..|.+.|.+.+ .+..++++++|++++.+ ++.+.|++ .
T Consensus 155 ---~~~---~-----------------~-~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~ 210 (497)
T 2bry_A 155 ---FCT---G-----------------T-LDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNP 210 (497)
T ss_dssp ---TTC---T-----------------T-CCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCC
T ss_pred ---ccc---c-----------------c-cccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECC
Confidence 000 0 0 12467888888888876 34568999999999874 35677777 4
Q ss_pred CC--cEEeccEEEEecCCCchhhhhh
Q 005770 227 NG--QCYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 227 dg--~~i~a~~vVgADG~~S~VR~~l 250 (678)
+| ++++||+||+|||++|.+|+..
T Consensus 211 ~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 211 PAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp CHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred CCCEEEEEcCEEEECCCCCccccccc
Confidence 56 4799999999999999999866
No 30
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.80 E-value=3.2e-19 Score=158.14 Aligned_cols=99 Identities=23% Similarity=0.384 Sum_probs=79.1
Q ss_pred ceEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEE-----------eCCEEEEEeC
Q 005770 543 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY-----------KDGAFYLIDL 611 (678)
Q Consensus 543 ~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~-----------~~~~~~i~Dl 611 (678)
.|.|..+.++. ..+.+.+. .+..++|||.++ |||+|+++.|||+||+|.+ .++.|+|+||
T Consensus 20 ~~~L~v~k~g~-~~~~~~L~---~~~~~~IGR~~~-----~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~Dl 90 (130)
T 4h87_A 20 PYSLETLKGGT-ILGTRSLK---GTSYCLFGRLSG-----CDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLYDL 90 (130)
T ss_dssp CCEEEEEETTE-EEEEEECT---TCSEEEEESSTT-----SSEECCCTTSCSSCEEEEEBCCCCCC------CCEEEEEC
T ss_pred CEEEEEEECCe-eeeeEEeC---CCceEEEcCCcC-----CCEEeCCCCcchhcEEEEEecccCccceeccCCcceEeeC
Confidence 46666665442 22223322 345689999988 9999999999999999965 3677999999
Q ss_pred CCCCceEecCCCCceeecCCCCcEEeCCCCEEEECCCceEEEEEE
Q 005770 612 QSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 656 (678)
Q Consensus 612 ~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~ 656 (678)
+|+|||||||. +|.++.++.|++||+|+||.++.. |.++
T Consensus 91 ~StNGT~vNg~-----ri~~~~~~~L~~GD~I~~G~str~-yvl~ 129 (130)
T 4h87_A 91 GSTHGTFLNKT-----RIPPRTYCRVHVGHVVRFGGSTRL-FILQ 129 (130)
T ss_dssp SCSSCEEETTE-----ECCTTCCEECCTTCEEEETTCSEE-EEEE
T ss_pred CCCCceEECCE-----ECCCCceeECCCCCEEEECCceEE-EEEc
Confidence 99999999999 999999999999999999998766 8775
No 31
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.74 E-value=1.1e-17 Score=146.82 Aligned_cols=100 Identities=20% Similarity=0.279 Sum_probs=81.2
Q ss_pred ceEEEecCCCCCcCcceeeecccCCCcEEeCCC-CCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEecC
Q 005770 543 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSE-SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTD 621 (678)
Q Consensus 543 ~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~-~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~~ 621 (678)
.+.|....+.. ....+.+. .+..++|||. .. |||+++++.|||+||+|.++++.|+|+|++|+|||||||
T Consensus 12 ~l~L~v~~g~~-~g~~~~l~---~~~~~~iGR~~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vng 82 (118)
T 1uht_A 12 SLRLVFVKGPR-EGDALDYK---PGSTIRVGRIVRG-----NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNS 82 (118)
T ss_dssp EEEEEESSSTT-TTCBCCBC---TTCCEEEESSSTT-----CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEESS
T ss_pred eEEEEEEeCCC-CCcEEEEC---CCCEEEEcCCCCC-----CCEEeCCCCCchHHeEEEEECCEEEEEECCCCCCeEECC
Confidence 35566655543 33444443 1357999999 56 999999999999999999999999999999999999999
Q ss_pred CCCceeecCCCCcEEeCCCCEEEECCCceEEEEEE
Q 005770 622 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 656 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~ 656 (678)
. ++.+++++.|++||+|+||+.....|+++
T Consensus 83 ~-----~l~~~~~~~L~~gd~i~lG~~~~~~~~~~ 112 (118)
T 1uht_A 83 N-----ALDPETSVNLGDGDVIKLGEYTSILVNFV 112 (118)
T ss_dssp S-----BCCTTCEEECCTTEEEEETTTEEEEEEEE
T ss_pred E-----ECCCCCeEEcCCCCEEEECCeEEEEEEEe
Confidence 9 99988899999999999999864434444
No 32
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.72 E-value=1.9e-17 Score=146.95 Aligned_cols=82 Identities=23% Similarity=0.318 Sum_probs=72.6
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEe--CCEEEEEeCCCCCceEecCCCCceee--cCCCCcEEeCCCCE
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTDNEGRRYR--VSSNFPARFRPSDT 642 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~v~~~~~~~~~--~~~~~~~~l~~gd~ 642 (678)
...++|||.++ |||+++++.|||+||+|.++ ++.|+|+|++|+|||||||. + |.+++++.|++||+
T Consensus 44 ~~~~~IGR~~~-----~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~-----~i~l~~~~~~~L~~GD~ 113 (132)
T 3va4_A 44 LGKNVVGRSPD-----CSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKP-----PRVLPPGVSHRLRDQEL 113 (132)
T ss_dssp SEEEEEESSTT-----SSEECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTT-----TEEECTTCCEECCTTCE
T ss_pred CCCEEEccCCC-----CCEEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCE-----EcccCCCCEEECCCCCE
Confidence 55789999998 99999999999999999997 68899999999999999998 5 78889999999999
Q ss_pred EEECCCceEEEEEEeccCC
Q 005770 643 IEFGSDKKAIFRVKVIGTP 661 (678)
Q Consensus 643 i~~g~~~~~~~~~~~~~~~ 661 (678)
|+||+.. |+|.....+
T Consensus 114 I~lG~~~---l~f~~~~~p 129 (132)
T 3va4_A 114 ILFADFP---CQYHRLDVP 129 (132)
T ss_dssp EEETTEE---EEEEECCCC
T ss_pred EEECCEE---EEEEECCCC
Confidence 9999884 556655333
No 33
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.72 E-value=1.6e-16 Score=166.71 Aligned_cols=155 Identities=14% Similarity=0.118 Sum_probs=87.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcc-------cc-cceeeChhHHHHHHhcChhHHHHHHHhc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQ-------YR-GPIQIQSNALAALEAIDLDVAEEVMRAG 148 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~-------~~-~~~~l~~~~~~~L~~l~~gl~~~~~~~~ 148 (678)
.+||+||||||+|+++|+.|+++|++|+|+|+.+.+...... .+ +...+.....++++.+ +.+...+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV-----KQWQAQG 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH-----HHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH-----HHHHhCC
Confidence 369999999999999999999999999999998543110000 00 0111221112222211 1111111
Q ss_pred ccc--ccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEc
Q 005770 149 CVT--GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE 226 (678)
Q Consensus 149 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~ 226 (678)
... ...+. ... .+. +.. .......+........+.+.|.+ ...++++++|++++.++++|+|++.
T Consensus 77 ~~~~~~~~~~-~~~--~~~----~~~---~~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~~~v~~~ 143 (336)
T 1yvv_A 77 HVAEWTPLLY-NFH--AGR----LSP---SPDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGEEHWNLLDA 143 (336)
T ss_dssp SEEEECCCEE-EES--SSB----CCC---CCTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECSSCEEEEET
T ss_pred Ceeeccccce-ecc--Ccc----ccc---CCCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeCCEEEEEeC
Confidence 110 00000 000 000 000 00000011111122334444443 3458899999999999999999999
Q ss_pred CCcEE-eccEEEEecCCCchhhhh
Q 005770 227 NGQCY-AGDLLIGADGIWSKVRKN 249 (678)
Q Consensus 227 dg~~i-~a~~vVgADG~~S~VR~~ 249 (678)
+|+.+ ++|+||+|||++|.+|..
T Consensus 144 ~g~~~~~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 144 EGQNHGPFSHVIIATPAPQASTLL 167 (336)
T ss_dssp TSCEEEEESEEEECSCHHHHGGGG
T ss_pred CCcCccccCEEEEcCCHHHHHHhh
Confidence 99866 499999999999999865
No 34
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.71 E-value=3.4e-17 Score=140.60 Aligned_cols=98 Identities=20% Similarity=0.417 Sum_probs=80.3
Q ss_pred CceEEEecCCCCCcCcceeeecccCCCcEEeCCCC-CCCCCcceEEeCCCcccccceEEEEe-CCEEEEEeCCCCCceEe
Q 005770 542 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTYV 619 (678)
Q Consensus 542 ~~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~-~~~~~~~~~~~~~~~vSr~Ha~i~~~-~~~~~i~Dl~S~nGt~v 619 (678)
..|.|....+.. .+..+.+. .+..++|||.+ + ||++++++.|||+||+|.++ ++.|+|+|++|+|||||
T Consensus 3 ~~~~L~v~~G~~-~g~~~~l~---~~~~~~iGR~~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~v 73 (106)
T 3gqs_A 3 SRFLLKVLAGAN-IGAEFHLD---SGKTYIVGSDPQV-----ADIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVIV 73 (106)
T ss_dssp CEEEEEECC-CC-TTCEEEEC---TTCEEEEESCTTT-----CSEECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCEE
T ss_pred ceEEEEEEeCCC-CcEEEEEC---CCCEEEEeECCCc-----CCEEeCCCCcchhhcEEEECCCCcEEEEECcCCCCeEE
Confidence 358888887765 45555555 13468999998 6 99999999999999999999 78899999999999999
Q ss_pred cCCCCceeecCCCCcEEeCCCCEEEECCCceEEEEEEec
Q 005770 620 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 658 (678)
Q Consensus 620 ~~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 658 (678)
||. ++.+ ++.|++||+|+||+.. |+|...
T Consensus 74 ng~-----~i~~--~~~L~~Gd~i~~G~~~---~~~~~~ 102 (106)
T 3gqs_A 74 EGR-----KIEH--QSTLSANQVVALGTTL---FLLVDY 102 (106)
T ss_dssp TTE-----ECSS--EEECCTTCCEEETTEE---EEEEEE
T ss_pred CCE-----ECCC--CeECCCCCEEEECCEE---EEEEcc
Confidence 998 8764 5799999999999873 556544
No 35
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.71 E-value=4.2e-17 Score=142.13 Aligned_cols=95 Identities=23% Similarity=0.333 Sum_probs=77.3
Q ss_pred ceEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEecCC
Q 005770 543 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDN 622 (678)
Q Consensus 543 ~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~~~ 622 (678)
.+.|....+.. ....+.+. ...++|||.++ |||+++++.|||+||+|.++++.|+|+|++|+|||||||.
T Consensus 11 ~~~L~v~~g~~-~g~~~~l~----~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~ 80 (115)
T 2xt9_B 11 SALLVVKRGPN-AGSRFLLD----QPTTSAGRHPD-----SDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVNRE 80 (115)
T ss_dssp CEEEEEEESTT-TTCEEEEC----SSEEEEESSTT-----SSEECCSTTSCSSCEEEEEETTEEEEEECSCSSCEEETTE
T ss_pred cEEEEEEeCCC-CCeEEEEC----CCCEEECCCCC-----CCEEeCCcccChhheEEEEECCEEEEEECCCCCCeEECCE
Confidence 45555554443 34445544 56899999998 9999999999999999999999999999999999999998
Q ss_pred CCceeecCCCCcEEeCCCCEEEECCCceEEEEEEec
Q 005770 623 EGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 658 (678)
Q Consensus 623 ~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 658 (678)
++. ++.|++||+|+||.. .|+|...
T Consensus 81 -----~i~---~~~L~~gd~i~iG~~---~l~~~~~ 105 (115)
T 2xt9_B 81 -----PVD---SAVLANGDEVQIGKF---RLVFLTG 105 (115)
T ss_dssp -----ECS---EEEECTTCEEEETTE---EEEEEC-
T ss_pred -----Ecc---eEECCCCCEEEECCE---EEEEEeC
Confidence 776 689999999999986 3555543
No 36
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.70 E-value=9e-17 Score=144.68 Aligned_cols=102 Identities=18% Similarity=0.290 Sum_probs=83.1
Q ss_pred CCceEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCc----ccccceEEEE-eCCEEEEEeCCCCC
Q 005770 541 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISY-KDGAFYLIDLQSEH 615 (678)
Q Consensus 541 ~~~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~----vSr~Ha~i~~-~~~~~~i~Dl~S~n 615 (678)
+..|.|...+... ..+.+. .+..++|||.++ ||++++++. |||+||+|.+ .++.|+|+|++|+|
T Consensus 7 ~~~w~l~~~G~~~---~~~~l~---~~~~~~IGR~~~-----~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~N 75 (138)
T 2pie_A 7 GRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLN 75 (138)
T ss_dssp CEEEEEEETTCSS---CBEEEC---TTCCEEEESSSS-----SSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECSCSS
T ss_pred CccEEEEEeCCCC---CEEEec---CCCeEEECCCCC-----CCEEeCCCCcCCCCChhHeEEEEcCCCcEEEEECCCCC
Confidence 3458888876543 344433 255799999998 999999998 9999999999 58889999999999
Q ss_pred ceEecCCCCceeecCCCCcEEeCCCCEEEECCC----ceEEEEEEec
Q 005770 616 GTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD----KKAIFRVKVI 658 (678)
Q Consensus 616 Gt~v~~~~~~~~~~~~~~~~~l~~gd~i~~g~~----~~~~~~~~~~ 658 (678)
||||||. ++.+++++.|++||+|+||.. ....|.++..
T Consensus 76 GT~vNg~-----~l~~~~~~~L~~GD~I~lG~~~~~~~~~~f~~~~~ 117 (138)
T 2pie_A 76 GVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVT 117 (138)
T ss_dssp CEEETTE-----ECCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEE
T ss_pred CeEECCE-----EcCCCCcEECCCCCEEEECCCCCCCceEEEEEEec
Confidence 9999999 999999999999999999993 2223666654
No 37
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.69 E-value=8.8e-17 Score=136.49 Aligned_cols=76 Identities=25% Similarity=0.409 Sum_probs=68.5
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEecCCCCceeecCCCCcEEeCCCCEEEEC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFG 646 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~~g 646 (678)
...++|||.++ ||++++++.|||+||+|.++++.|+|+|++|+|||||||. ++. ++.|++||+|+||
T Consensus 22 ~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~---~~~L~~gd~i~iG 88 (100)
T 3po8_A 22 EGSNIIGRGQD-----AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EWQLADGDVIRLG 88 (100)
T ss_dssp SEEEEEESSTT-----CSEECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EEECCTTCEEEET
T ss_pred CCCEEEeCCCC-----CCEECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCE-----ECc---eEECCCCCEEEEC
Confidence 55799999988 9999999999999999999999999999999999999998 775 6899999999999
Q ss_pred CCceEEEEEE
Q 005770 647 SDKKAIFRVK 656 (678)
Q Consensus 647 ~~~~~~~~~~ 656 (678)
+.... |++.
T Consensus 89 ~~~~~-~~~~ 97 (100)
T 3po8_A 89 HSEII-VRMH 97 (100)
T ss_dssp TEEEE-EEEE
T ss_pred CEEEE-EEEE
Confidence 97544 5554
No 38
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.68 E-value=7.4e-17 Score=147.56 Aligned_cols=102 Identities=22% Similarity=0.291 Sum_probs=79.9
Q ss_pred ceEEEecCCCCCcCcceeeecccCCCcEEeCCCCC----------CCCCcceEEeCCCcccccceEEEEeCCE----EEE
Q 005770 543 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESH----------EDFSRTSIVIPSAQVSKMHARISYKDGA----FYL 608 (678)
Q Consensus 543 ~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~----------~~~~~~~~~~~~~~vSr~Ha~i~~~~~~----~~i 608 (678)
.|.|+.+.++..+..++.......+..++|||.+. ++...|||+|+++.|||+||+|.++++. |+|
T Consensus 31 ~~~l~v~k~g~~~~~~~~~~~L~~~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~~~~~~l 110 (158)
T 3els_A 31 MYELVIYRKNDKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGILKCYV 110 (158)
T ss_dssp CEEEEEEEGGGGGGCCSEEEECSSCSEEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETTEEEEEE
T ss_pred ceEEEEEeCCccCcccceEEEecCCCceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCCeeEEEE
Confidence 58888886543111133332223456799999853 2334599999999999999999998655 999
Q ss_pred EeCCCCCceEecCCCCceeecCCCCcEEeCCCCEEEECCCc
Q 005770 609 IDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 649 (678)
Q Consensus 609 ~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~~g~~~ 649 (678)
+|++|+|||||||. ++.++.+++|++||+|+||...
T Consensus 111 ~Dl~StNGT~VNg~-----ri~~~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 111 MDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp EECSCSSCCEETTE-----ECCTTCCEECCTTEEEESSSCG
T ss_pred EeCCCCCccEECCE-----EcCCCceEEcCCCCEEEECCCC
Confidence 99999999999999 9999999999999999999754
No 39
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.68 E-value=9.4e-17 Score=144.60 Aligned_cols=96 Identities=23% Similarity=0.374 Sum_probs=78.7
Q ss_pred CCceEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEec
Q 005770 541 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 620 (678)
Q Consensus 541 ~~~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~ 620 (678)
...|.|+...+.. .+..+.+. +..++|||.++ |||+|+++.|||+||+|.++++.|+|+|++|+||||||
T Consensus 44 ~~~~~L~v~~G~~-~g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~~l~DlgS~NGT~VN 113 (143)
T 2kb3_A 44 AGSALLVVKRGPN-AGARFLLD----QPTTTAGRHPE-----SDIFLDDVTVSRRHAEFRINEGEFEVVDVGSLNGTYVN 113 (143)
T ss_dssp SSCEEEEEEESTT-TTCEEEEC----SSEEEESSCTT-----CSBCCCCSSCCSSSEEEEEETTEEEEEESCCSSCCEET
T ss_pred CccEEEEEEeCCC-CCeEEEeC----CCCeeccCCCC-----CCEEeCCCCcChhhEEEEEECCEEEEEECCCcCCeEEC
Confidence 3346666665543 34445544 66899999998 99999999999999999999999999999999999999
Q ss_pred CCCCceeecCCCCcEEeCCCCEEEECCCceEEEEEEe
Q 005770 621 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 657 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 657 (678)
|. ++. ++.|++||+|+||+.. |+|..
T Consensus 114 g~-----~i~---~~~L~~GD~I~iG~~~---l~f~~ 139 (143)
T 2kb3_A 114 RE-----PRN---AQVMQTGDEIQIGKFR---LVFLA 139 (143)
T ss_dssp TE-----ECS---EEECCTTEEEEETTEE---EEEEE
T ss_pred CE-----Ecc---eEECCCCCEEEECCEE---EEEEe
Confidence 98 776 6899999999999863 55543
No 40
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.68 E-value=2.5e-16 Score=141.97 Aligned_cols=104 Identities=22% Similarity=0.377 Sum_probs=81.3
Q ss_pred eEEEecCCCCCcCcceeeecc-cCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCC--EEEEEeCCCCCceEec
Q 005770 544 WFLVPSGSENVVSQPIYLSVS-HENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG--AFYLIDLQSEHGTYVT 620 (678)
Q Consensus 544 ~~Ll~~~~~~~~~~~l~~~~~-~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~--~~~i~Dl~S~nGt~v~ 620 (678)
+.|....+.. .+..+.+... ..+..++|||.++ |+|+++++.|||+||+|.++++ .|+|+|++|+||||||
T Consensus 8 ~~L~v~~G~~-~g~~~~l~~~~~~~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vN 81 (139)
T 1mzk_A 8 LFLEVIAGPA-IGLQHAVNSTSSSKLPVKLGRVSP-----SDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVN 81 (139)
T ss_dssp EEEEECSSTT-CSCEEEECTTCSTTCSEEEESSSS-----CSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEET
T ss_pred EEEEEEeCCC-CCeEEEecCCCCccceEEeeCCCC-----CCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEEC
Confidence 5566665554 3445554411 1124799999998 9999999999999999999864 7999999999999999
Q ss_pred CCCCceeecCC--------CCcEEeCCCCEEEECCCceEEEEEEec
Q 005770 621 DNEGRRYRVSS--------NFPARFRPSDTIEFGSDKKAIFRVKVI 658 (678)
Q Consensus 621 ~~~~~~~~~~~--------~~~~~l~~gd~i~~g~~~~~~~~~~~~ 658 (678)
|. ++.+ ++++.|++||+|+||+.....+++...
T Consensus 82 g~-----~i~~~~~~~~~~~~~~~L~~GD~I~iG~~~~~~~~~~~~ 122 (139)
T 1mzk_A 82 SH-----SISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQ 122 (139)
T ss_dssp TE-----ESSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEEC
T ss_pred CE-----ECcCcccccccCCceEECCCCCEEEECCEEEEEEEcCCC
Confidence 99 8873 779999999999999986653444433
No 41
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.68 E-value=1.3e-17 Score=150.65 Aligned_cols=100 Identities=24% Similarity=0.485 Sum_probs=80.8
Q ss_pred ceEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeC--CEEEEEeCCCCCceEec
Q 005770 543 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD--GAFYLIDLQSEHGTYVT 620 (678)
Q Consensus 543 ~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~--~~~~i~Dl~S~nGt~v~ 620 (678)
.|.|....+.. ....+.+. .+..++|||.++. |||+++++.|||+||+|.+++ +.|+|+|++|+||||||
T Consensus 34 ~~~L~v~~g~~-~g~~~~l~---~~~~~~IGR~~~~----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~vN 105 (140)
T 2jpe_A 34 GLHLDVVKGDK-LIEKLIID---EKKYYLFGRNPDL----CDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLG 105 (140)
T ss_dssp SCBEEEESSSS-EEEEECCS---SCSBCCBSSCTTT----SSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEESS
T ss_pred CEEEEEEcCCC-cceEEEeC---CCCeEEecCCCcc----CCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCeEEC
Confidence 46666665543 22333333 1235999999874 789999999999999999997 89999999999999999
Q ss_pred CCCCceeecCCCCcEEeCCCCEEEECCCceEEEEEE
Q 005770 621 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 656 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~ 656 (678)
|. ++.+++++.|++||+|+||+.... |++.
T Consensus 106 g~-----~l~~~~~~~L~~gd~i~~G~~~~~-f~~~ 135 (140)
T 2jpe_A 106 HI-----RLEPHKPQQIPIDSTVSFGASTRA-YTLR 135 (140)
T ss_dssp SC-----EECSSSCCEECTTCCBBCSSCCCC-BCCB
T ss_pred CE-----ECCCCccEECCCCCEEEECCceEE-EEEe
Confidence 99 999999999999999999998655 6543
No 42
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.68 E-value=1e-16 Score=146.70 Aligned_cols=97 Identities=19% Similarity=0.353 Sum_probs=77.1
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEE--------eCCEEEEEeCCCCCceEecCCCCceeecCCCCcEEeC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY--------KDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFR 638 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~--------~~~~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~ 638 (678)
+..++|||.+. |||+|+++.|||+||+|.+ .++.|+|+|+ |+|||||||. ++.++ ++.|+
T Consensus 37 ~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S~NGT~VNg~-----~i~~~-~~~L~ 104 (151)
T 2jqj_A 37 RNVTTIGRSRS-----CDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-SRNGTFINGN-----RLVKK-DYILK 104 (151)
T ss_dssp CSCEEEESSTT-----SSEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEETTE-----ECCSS-CEEEC
T ss_pred CCeEEeCCCCC-----CCEEECCCCCccccCEEEEecccCCcCcCCEEEEEEC-CCCCeEECCE-----EcCCC-ceECC
Confidence 46799999987 9999999999999999999 7889999999 9999999999 99887 89999
Q ss_pred CCCEEEECCCceEEEEEEeccCCCCCccccccchhhhh
Q 005770 639 PSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQ 676 (678)
Q Consensus 639 ~gd~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (678)
+||+|.||......|++......+... ..++.++..+
T Consensus 105 ~GD~I~lG~~~~~~f~~~~~~~~~~~~-~~~~~~~~~~ 141 (151)
T 2jqj_A 105 NGDRIVFGKSCSFLFKYASSSSTDIEN-DDEKVSSESR 141 (151)
T ss_dssp SSEEEEETTTEEEEEEECSSCCCCCSS-CSSCCCSSSS
T ss_pred CCCEEEECCCcEEEEEEcCCCcccccc-CcHHHHHHhh
Confidence 999999999522235555443333333 3455554443
No 43
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.67 E-value=1.6e-16 Score=145.61 Aligned_cols=95 Identities=22% Similarity=0.330 Sum_probs=76.8
Q ss_pred ceEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEecCC
Q 005770 543 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDN 622 (678)
Q Consensus 543 ~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~~~ 622 (678)
.+.|+...+.. ....+.+. +..++|||.++ |||+|+++.|||+||+|.++++.|+|+|++|+|||||||.
T Consensus 55 ~~~L~v~~G~~-~g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~VNg~ 124 (162)
T 2kfu_A 55 SALLVVKRGPN-AGSRFLLD----QAITSAGRHPD-----SDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNRE 124 (162)
T ss_dssp CCEEEEEESTT-CSCEEETT----SSEEEEESCSS-----SSEESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEETTB
T ss_pred cEEEEEEeCCC-CCeEEEEC----CCCEEECCCCC-----CCEEECCCCcChhhEEEEEECCEEEEEECCCCCCeEECCE
Confidence 35555544443 23444443 67899999988 9999999999999999999999999999999999999999
Q ss_pred CCceeecCCCCcEEeCCCCEEEECCCceEEEEEEec
Q 005770 623 EGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 658 (678)
Q Consensus 623 ~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 658 (678)
++. ++.|++||+|+||+.. |+|...
T Consensus 125 -----~i~---~~~L~~GD~I~iG~~~---l~f~~~ 149 (162)
T 2kfu_A 125 -----PVD---SAVLANGDEVQIGKFR---LVFLTG 149 (162)
T ss_dssp -----CCS---EEECCSSCEEEETTEE---EEEECS
T ss_pred -----Ecc---eEECCCCCEEEECCEE---EEEEeC
Confidence 775 5799999999999863 555543
No 44
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.66 E-value=1.8e-16 Score=138.61 Aligned_cols=97 Identities=24% Similarity=0.331 Sum_probs=79.1
Q ss_pred EEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCC-cccccceEEEEe--CCEEEEEeCCCCCceEecCC
Q 005770 546 LVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK--DGAFYLIDLQSEHGTYVTDN 622 (678)
Q Consensus 546 Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~-~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~v~~~ 622 (678)
|+...+.. ....+.+. +..++|||.++ ||++|++. .|||+||+|.++ ++.|+|+| +|+|||||||.
T Consensus 7 L~~~~~~~-~~~~~~l~----~~~~~iGR~~~-----~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~ 75 (116)
T 1lgp_A 7 LLRLGAEE-GEPHVLLR----KREWTIGRRRG-----CDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTVINKL 75 (116)
T ss_dssp ECCTTCCS-SSCCEEEC----SSEEEEESSTT-----SSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCCCCCC
T ss_pred EEEeCCCC-CccEEEEC----CCCEEECCCCC-----CCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcEECCE
Confidence 44443322 23445544 67899999998 99999875 899999999997 78999999 99999999999
Q ss_pred CCceeecCCCCcEEeCCCCEEEECCCc-----eEEEEEEec
Q 005770 623 EGRRYRVSSNFPARFRPSDTIEFGSDK-----KAIFRVKVI 658 (678)
Q Consensus 623 ~~~~~~~~~~~~~~l~~gd~i~~g~~~-----~~~~~~~~~ 658 (678)
++.+++++.|++||+|.||... .+.|.|...
T Consensus 76 -----~l~~~~~~~L~~GD~i~~G~~~~~~~~~~~f~f~~~ 111 (116)
T 1lgp_A 76 -----KVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESL 111 (116)
T ss_dssp -----CCCCSSCCCCCTTCEEEEECCSSCGGGCEEEECCCS
T ss_pred -----EcCCCCcEECCCCCEEEEeccCCCCCceEEEEEEcc
Confidence 9999889999999999999863 345877665
No 45
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.66 E-value=2.3e-16 Score=148.07 Aligned_cols=102 Identities=22% Similarity=0.286 Sum_probs=77.4
Q ss_pred ceEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCC----------CCcceEEeCCCcccccceEEEEeCC----EEEE
Q 005770 543 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHED----------FSRTSIVIPSAQVSKMHARISYKDG----AFYL 608 (678)
Q Consensus 543 ~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~----------~~~~~~~~~~~~vSr~Ha~i~~~~~----~~~i 608 (678)
.|.|..+.++.-+...+.......+..++|||++..+ ...|||+|+++.|||+||+|.+.++ .|+|
T Consensus 78 ~~~L~v~k~g~k~~~~i~~~~L~~~s~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~~~~~l 157 (205)
T 3elv_A 78 MYELVIYRKNDKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGILKCYV 157 (205)
T ss_dssp CEEEEEEEGGGCTTCCSEEEECSSCSEEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTEEEEEE
T ss_pred ceEEEEEeCCCcccccceEEEecCCCceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCceeEEE
Confidence 4888888543201112222212246789999996311 2339999999999999999988642 4999
Q ss_pred EeCCCCCceEecCCCCceeecCCCCcEEeCCCCEEEECCCc
Q 005770 609 IDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 649 (678)
Q Consensus 609 ~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~~g~~~ 649 (678)
+||+|+|||||||. +|.++.++.|++||+|+||...
T Consensus 158 ~DLgStNGTfVNG~-----rI~~~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 158 MDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EECSCSSCCEETTE-----ECCBTSCEECCTTCEEESSSSG
T ss_pred EeCCCCCCCeECCE-----ECCCCceeECCCCCEEEECCCC
Confidence 99999999999999 9999889999999999999854
No 46
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.66 E-value=1.6e-16 Score=141.33 Aligned_cols=78 Identities=24% Similarity=0.287 Sum_probs=70.0
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEecCCCCceeecCCCCcEEeCCCCEEEEC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFG 646 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~~g 646 (678)
+..++|||.++ |||+++++.|||+||+|.++++.|+|+|++|+|||||||. ++. +++.|++||+|+||
T Consensus 32 ~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~-----~i~--~~~~L~~Gd~i~iG 99 (128)
T 1r21_A 32 LSTCLFGRGIE-----CDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGS-----VID--EPVRLKHGDVITII 99 (128)
T ss_dssp SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTE-----ECS--SCEECCTTEEEECS
T ss_pred CCCEEECCCCC-----CCEEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCE-----ECC--CcEEcCCCCEEEEC
Confidence 67899999988 9999999999999999999999999999999999999999 776 47899999999999
Q ss_pred CCceEEEEEEecc
Q 005770 647 SDKKAIFRVKVIG 659 (678)
Q Consensus 647 ~~~~~~~~~~~~~ 659 (678)
+. .|+|....
T Consensus 100 ~~---~~~~~~~~ 109 (128)
T 1r21_A 100 DR---SFRYENES 109 (128)
T ss_dssp SC---EEEEEEC-
T ss_pred CE---EEEEEeCC
Confidence 87 46666553
No 47
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.66 E-value=5.4e-16 Score=141.41 Aligned_cols=81 Identities=22% Similarity=0.320 Sum_probs=74.1
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCc---------ccccceEEEEeCC-----EEEEEeCCCCCceEecCCCCceeecCCC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQ---------VSKMHARISYKDG-----AFYLIDLQSEHGTYVTDNEGRRYRVSSN 632 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~---------vSr~Ha~i~~~~~-----~~~i~Dl~S~nGt~v~~~~~~~~~~~~~ 632 (678)
+..++|||.+. |+++++++. |||+||+|.++++ .|+|+|+ |+|||||||. ++.++
T Consensus 47 ~~~~~IGR~~~-----~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~-StNGT~VNg~-----~i~~~ 115 (149)
T 1gxc_A 47 NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDH-SGNGTFVNTE-----LVGKG 115 (149)
T ss_dssp SSEEEEESSTT-----CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEEC-CSSCEEETTE-----ECCTT
T ss_pred CCCEEecCCCC-----CCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEEC-CCCCeEECCE-----ECCCC
Confidence 67899999997 999999985 9999999999876 8999996 9999999999 99999
Q ss_pred CcEEeCCCCEEEECCCceEEEEEEec
Q 005770 633 FPARFRPSDTIEFGSDKKAIFRVKVI 658 (678)
Q Consensus 633 ~~~~l~~gd~i~~g~~~~~~~~~~~~ 658 (678)
.++.|++||+|.||......|.|...
T Consensus 116 ~~~~L~~GD~I~lG~~~~~~f~f~d~ 141 (149)
T 1gxc_A 116 KRRPLNNNSEIALSLSRNKVFVFFDL 141 (149)
T ss_dssp CEEECCTTEEEEESSTTCEEEEEEET
T ss_pred CeEECCCCCEEEECCCCCeEEEEEEC
Confidence 99999999999999976666888776
No 48
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.65 E-value=1.5e-16 Score=144.44 Aligned_cols=90 Identities=17% Similarity=0.275 Sum_probs=75.7
Q ss_pred ceEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCc----ccccceEEEEe-CCEEEEEeCCCCCce
Q 005770 543 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISYK-DGAFYLIDLQSEHGT 617 (678)
Q Consensus 543 ~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~----vSr~Ha~i~~~-~~~~~i~Dl~S~nGt 617 (678)
.|.|+ ..+.. ...+.+. .+..++|||.++ ||++++++. |||+||+|.++ ++.|+|+|++|+|||
T Consensus 17 ~w~L~-~~G~~--~~~~~l~---~~~~~~IGR~~~-----~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~NGT 85 (145)
T 2csw_A 17 SWCLR-RVGMS--AGWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGV 85 (145)
T ss_dssp EEEEC-CTTCS--CCBEECC---TTCCEEEESSTT-----SSEECCCSSCGGGSCTTCEEEEECTTSCEEEEBSSCSSCE
T ss_pred cEEEE-EeCCC--CCeEEeC---CCCcEEECCCCC-----CCEEECCCCcCCCCChhHeEEEEcCCCeEEEEECCCCCCe
Confidence 58777 33332 2334332 356799999998 999999998 99999999995 888999999999999
Q ss_pred EecCCCCceeecCCCCcEEeCCCCEEEECCC
Q 005770 618 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 648 (678)
Q Consensus 618 ~v~~~~~~~~~~~~~~~~~l~~gd~i~~g~~ 648 (678)
||||. ++.+++++.|++||+|+||+.
T Consensus 86 ~vNg~-----~i~~~~~~~L~~GD~I~iG~~ 111 (145)
T 2csw_A 86 WLNRA-----RLEPLRVYSIHQGDYIQLGVP 111 (145)
T ss_dssp EESSC-----BCCBTCCEECCSSCCEEESCC
T ss_pred EECCE-----ECCCCccEECCCCCEEEECCC
Confidence 99999 999999999999999999993
No 49
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.64 E-value=4.4e-16 Score=143.10 Aligned_cols=80 Identities=19% Similarity=0.330 Sum_probs=72.9
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeC---------------CEEEEEeCCCCCceEecCCCCceeecCC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------GAFYLIDLQSEHGTYVTDNEGRRYRVSS 631 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~---------------~~~~i~Dl~S~nGt~v~~~~~~~~~~~~ 631 (678)
..+++|||.+. ||++++++.|||+||+|.+++ +.|+|+|+ |+|||||||. ++.+
T Consensus 26 ~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~Dl-StNGT~VNg~-----ri~~ 94 (158)
T 1dmz_A 26 VNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT-GTNVSYLNNN-----RMIQ 94 (158)
T ss_dssp CSCEEEESSTT-----SSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEEC-STTCCEETTE-----ECCS
T ss_pred CceEEECCCCC-----CCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEEC-CcCCeEECCE-----EcCC
Confidence 44699999988 999999999999999999976 88999999 9999999999 9999
Q ss_pred CCcEEeCCCCEEEE-----CCCceEEEEEEec
Q 005770 632 NFPARFRPSDTIEF-----GSDKKAIFRVKVI 658 (678)
Q Consensus 632 ~~~~~l~~gd~i~~-----g~~~~~~~~~~~~ 658 (678)
+.++.|++||+|+| |..... |+++..
T Consensus 95 ~~~~~L~~GD~I~l~~d~~G~~~l~-f~~~~~ 125 (158)
T 1dmz_A 95 GTKFLLQDGDEIKIIWDKNNKFVIG-FKVEIN 125 (158)
T ss_dssp SEEEECCSSCCEESCCCTTTTCCCC-EEEECS
T ss_pred CceEEcCCCCEEEEeecCCCCEEEE-EEEEeC
Confidence 88999999999999 987666 888765
No 50
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.63 E-value=5.5e-16 Score=140.38 Aligned_cols=70 Identities=26% Similarity=0.424 Sum_probs=65.3
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEecCCCCceeecCCCCcEEeCCCCEEEEC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFG 646 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~~g 646 (678)
...++|||.++ |||+|+|+.|||+||+|.++++.|+|+|++|+|||||||. ++. ++.|++||+|+||
T Consensus 84 ~~~~~IGR~~~-----~dI~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~-----~i~---~~~L~~GD~I~lG 150 (157)
T 3oun_A 84 EGSNIIGRGQD-----AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EWQLADGDVIRLG 150 (157)
T ss_dssp SEEEEEESSTT-----CSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EEECCTTCEEEET
T ss_pred CCcEEEEeCCC-----CCEEeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCE-----ECc---eEECCCCCEEEEC
Confidence 55799999988 9999999999999999999999999999999999999998 775 6899999999999
Q ss_pred CCc
Q 005770 647 SDK 649 (678)
Q Consensus 647 ~~~ 649 (678)
+..
T Consensus 151 ~~~ 153 (157)
T 3oun_A 151 HSE 153 (157)
T ss_dssp TEE
T ss_pred CEE
Confidence 874
No 51
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.62 E-value=8e-16 Score=142.44 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=81.7
Q ss_pred eEEEecCCCCCcCcceeeecc-------cCCCcEEeCCCCCCCCCcceEEeCCC-cccccceEEEEe-CCEEEEEeCCCC
Q 005770 544 WFLVPSGSENVVSQPIYLSVS-------HENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK-DGAFYLIDLQSE 614 (678)
Q Consensus 544 ~~Ll~~~~~~~~~~~l~~~~~-------~~~~~~~iGR~~~~~~~~~~~~~~~~-~vSr~Ha~i~~~-~~~~~i~Dl~S~ 614 (678)
|.|+...+.. .+..+.+... ..+..++|||+++ |||+|+++ .|||+||+|.++ ++.|+|+|+ |+
T Consensus 34 ~~L~v~~G~~-~g~~~~l~~~~v~~~~~~~~~~~~IGR~~~-----~di~l~d~~~vSr~Ha~I~~~~~g~~~l~Dl-S~ 106 (164)
T 1g3g_A 34 CRVICTTGQI-PIRDLSADISQVLKEKRSIKKVWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDI-ST 106 (164)
T ss_dssp EEEECSSSSS-CCEEECCCHHHHHHCSSSCCEEEEEESSSS-----SSEECCCCTTTTSSCEEEEECSTTCEEEEEC-CS
T ss_pred EEEEEecCCC-CCeEEEeccccccccccccCCcEEECCCCC-----CCEEeCCcCCcChhHEEEEECCCCCEEEEEC-CC
Confidence 6666665553 3333433310 1134789999998 99999998 699999999995 899999999 99
Q ss_pred CceEecCCCCceeecCCCCcEEeCCCCEEEECCC---ceEEEEEEec
Q 005770 615 HGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD---KKAIFRVKVI 658 (678)
Q Consensus 615 nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~~g~~---~~~~~~~~~~ 658 (678)
|||||||. ++.++.++.|++||+|.||.. ....|.+..+
T Consensus 107 NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~~~~~~~~f~~~~~ 148 (164)
T 1g3g_A 107 NGTWLNGQ-----KVEKNSNQLLSQGDEITVGVGVESDILSLVIFIN 148 (164)
T ss_dssp SCEEETTE-----EECTTEEEECCTTCEEEESCSSTTSCEEEEEEEC
T ss_pred CCeEECCE-----EcCCCCceEcCCCCEEEECCCCCCCcEEEEEEeC
Confidence 99999999 999888999999999999995 3445877776
No 52
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.62 E-value=1.2e-15 Score=135.68 Aligned_cols=78 Identities=27% Similarity=0.388 Sum_probs=67.3
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEe---CC--EEEEEeC-----CCCCceEecCCCCceeecCCCCcEE
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK---DG--AFYLIDL-----QSEHGTYVTDNEGRRYRVSSNFPAR 636 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~---~~--~~~i~Dl-----~S~nGt~v~~~~~~~~~~~~~~~~~ 636 (678)
+..++|||.++ |||+++++.|||+||+|.++ ++ .|+|+|+ +|+|||||||. ++.. +.
T Consensus 29 ~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT~vNg~-----~i~~---~~ 95 (131)
T 3hx1_A 29 ETFYTIGRSPR-----ADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGLMINGK-----KVQE---HI 95 (131)
T ss_dssp SSEEEEESSTT-----SSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSCEEETTE-----EESE---EE
T ss_pred CCCEEECCCCC-----CCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCceEECCE-----EeEe---EE
Confidence 66899999998 99999999999999999986 23 4999999 79999999999 8763 89
Q ss_pred eCCCCEEEECCCceEEEEEEe
Q 005770 637 FRPSDTIEFGSDKKAIFRVKV 657 (678)
Q Consensus 637 l~~gd~i~~g~~~~~~~~~~~ 657 (678)
|++||+|+||+.....|.+..
T Consensus 96 L~~GD~I~iG~~~~~~~~~~~ 116 (131)
T 3hx1_A 96 IQTGDEIVMGPQVSVRYEYRR 116 (131)
T ss_dssp CCTTCEEECSTTCEEEEEEEC
T ss_pred CCCCCEEEECCEEEEEEEEec
Confidence 999999999998777454443
No 53
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.61 E-value=2.9e-15 Score=131.38 Aligned_cols=78 Identities=19% Similarity=0.319 Sum_probs=68.8
Q ss_pred CCcEEeCCC--CCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEecCCCCceeecCCCCcEEeCCCCEEE
Q 005770 567 NEPYLIGSE--SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIE 644 (678)
Q Consensus 567 ~~~~~iGR~--~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~ 644 (678)
...++|||. .+ |||+|+++.|||+||+|.++++.|+|+|++|+|||||||. ++. +++.|++||+|+
T Consensus 35 ~~~~~IGr~r~~~-----~di~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~-----~i~--~~~~L~~GD~I~ 102 (120)
T 1wln_A 35 LSVTEVGTEKFDD-----NSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQ-----RIS--ETTMLQSGMRLQ 102 (120)
T ss_dssp SEEEECSSSCCST-----TCCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSC-----BCS--SCEEECTTCEEE
T ss_pred CCCEEECCCCCCC-----CcEEECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCE-----EcC--CCEECCCCCEEE
Confidence 557899974 44 9999999999999999999999999999999999999999 886 578999999999
Q ss_pred ECCCceEEEEEEec
Q 005770 645 FGSDKKAIFRVKVI 658 (678)
Q Consensus 645 ~g~~~~~~~~~~~~ 658 (678)
||+.. .|+|..+
T Consensus 103 iG~~~--~~~f~~p 114 (120)
T 1wln_A 103 FGTSH--VFKFVDP 114 (120)
T ss_dssp ETTTE--EEEEECS
T ss_pred ECCce--EEEEECC
Confidence 99952 4777755
No 54
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.61 E-value=1.8e-15 Score=134.24 Aligned_cols=81 Identities=20% Similarity=0.321 Sum_probs=71.8
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCC-cccccceEEEE-eCCEEEEEeCCCCCceEecCCCCceeecCCCCcEEeCCCCEEE
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISY-KDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIE 644 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~-~vSr~Ha~i~~-~~~~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~i~ 644 (678)
+..++|||.++ ||++++++ .|||.||+|.+ .++.|+|+|+ |+|||||||. ++.+++++.|++||+|+
T Consensus 35 ~~~~~IGR~~~-----~di~l~~~~~vSr~Ha~i~~~~~g~~~l~Dl-S~NGT~vNg~-----~l~~~~~~~L~~Gd~I~ 103 (127)
T 1g6g_A 35 KKVWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDI-STNGTWLNGQ-----KVEKNSNQLLSQGDEIT 103 (127)
T ss_dssp CEEEEEESSTT-----SSEECCSCTTSCSSCEEEEECTTSCEEEEEC-CSSCCEETTE-----ECCTTCCEECCTTCEEE
T ss_pred CCCEEECCCCC-----CCEEeCCCCCCChhHeEEEECCCCcEEEEEC-CcCCeEECCE-----EcCCCCeEEcCCCCEEE
Confidence 44799999998 99999997 69999999999 5889999999 9999999999 99999999999999999
Q ss_pred ECCCc---eEEEEEEec
Q 005770 645 FGSDK---KAIFRVKVI 658 (678)
Q Consensus 645 ~g~~~---~~~~~~~~~ 658 (678)
||... .+.|.|..+
T Consensus 104 lG~~~~~~~i~f~~~~~ 120 (127)
T 1g6g_A 104 VGVGVESDILSLVIFIN 120 (127)
T ss_dssp ECTTSGGGCEEEEEEEC
T ss_pred ECCCccCceEEEEEEeC
Confidence 99953 334777665
No 55
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.60 E-value=9.5e-16 Score=143.65 Aligned_cols=80 Identities=19% Similarity=0.330 Sum_probs=72.3
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeC---------------CEEEEEeCCCCCceEecCCCCceeecCC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------GAFYLIDLQSEHGTYVTDNEGRRYRVSS 631 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~---------------~~~~i~Dl~S~nGt~v~~~~~~~~~~~~ 631 (678)
..+++|||.+. |||+|+++.|||+||+|.+++ +.|+|+|+ |+|||||||. ++.+
T Consensus 50 ~~~~~IGR~~~-----~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~~~~~~l~Dl-StNGT~VNg~-----ri~~ 118 (182)
T 1qu5_A 50 VNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT-GTNVSYLNNN-----RMIQ 118 (182)
T ss_dssp CSSEEESSSTT-----SSSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCCSCCEEEECCC-SSSCCEETTE-----ECCS
T ss_pred CceEEECCCCC-----CCEEECCCCcChHHeEEEEecCccccccccccccccceEEEEEC-CcCCeEECCE-----EcCC
Confidence 34699999998 999999999999999999987 89999999 9999999999 9998
Q ss_pred CCcEEeCCCCEEEE-----CCCceEEEEEEec
Q 005770 632 NFPARFRPSDTIEF-----GSDKKAIFRVKVI 658 (678)
Q Consensus 632 ~~~~~l~~gd~i~~-----g~~~~~~~~~~~~ 658 (678)
+.++.|++||+|+| |..... |++...
T Consensus 119 ~~~~~L~~GD~I~l~~d~~G~~~l~-f~~~~~ 149 (182)
T 1qu5_A 119 GTKFLLQDGDEIKIIWDKNNKFVIG-FKVEIN 149 (182)
T ss_dssp SEEEECCTTBCCEEEEEGGGTEEEE-CCEEES
T ss_pred CcceEcCCCCEEEEEEcCCCCEEEE-EEEEeC
Confidence 88999999999999 987555 777654
No 56
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.52 E-value=7.4e-14 Score=121.74 Aligned_cols=96 Identities=24% Similarity=0.409 Sum_probs=75.0
Q ss_pred eEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEE-eCCEEEEEeCCCCCceEecCC
Q 005770 544 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY-KDGAFYLIDLQSEHGTYVTDN 622 (678)
Q Consensus 544 ~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~-~~~~~~i~Dl~S~nGt~v~~~ 622 (678)
+.|+...++....+.+...+ +..++|||.++ +||+|+++.||++||+|.. .++.|+|+|++ +|||||||.
T Consensus 27 PhLvnLn~Dp~~s~~l~y~L---~~~t~IGR~~~-----~DI~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt~VNG~ 97 (124)
T 3fm8_A 27 CFLVNLNADPALNELLVYYL---KEHTLIGSANS-----QDIQLCGMGILPEHCIIDITSEGQVMLTPQK-NTRTFVNGS 97 (124)
T ss_dssp CEEEETTCCTTSSCCCEEEC---CSEEEEESSTT-----CSEECCSTTCCSSCEEEEECTTSCEEEEECT-TCCEEETTE
T ss_pred cEEEEeCCCCccCceEEEEC---CCCeEECCCCC-----CCEEECCCCeecceEEEEECCCCeEEEEECC-CCCEEECCE
Confidence 44666655432233333222 22589999988 9999999999999999999 48889999995 899999999
Q ss_pred CCceeecCCCCcEEeCCCCEEEECCCceEEEEEEe
Q 005770 623 EGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 657 (678)
Q Consensus 623 ~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 657 (678)
++. +++.|++||+|.||+.. .|+|..
T Consensus 98 -----~V~--~~~~L~~GD~I~lG~~~--~FrFn~ 123 (124)
T 3fm8_A 98 -----SVS--SPIQLHHGDRILWGNNH--FFRLNL 123 (124)
T ss_dssp -----ECC--SCEEECTTCEEEETTTE--EEEEEC
T ss_pred -----EcC--CcEECCCCCEEEECCCe--EEEEEC
Confidence 886 57899999999999875 477753
No 57
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.49 E-value=1.1e-13 Score=126.44 Aligned_cols=81 Identities=22% Similarity=0.350 Sum_probs=68.5
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCC----EEEEEeCCCCCceEecCCCCceeecCCCCcEEeCCCCE
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG----AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDT 642 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~----~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd~ 642 (678)
...++|||..... .|||+|.++.||++||.|..+++ .+++.|++|+|||||||. ++. +++.|++||+
T Consensus 60 ~g~t~IGR~~~~~--~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~VNG~-----~i~--~~~~L~~GD~ 130 (154)
T 4ejq_A 60 DGITRVGREDGER--RQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYVNGK-----KVT--EPSILRSGNR 130 (154)
T ss_dssp SEEEEEECSSCSS--CCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEEETTE-----ECC--SCEECCTTCE
T ss_pred CCCEEEcCCCCCC--CCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceEECCE-----EcC--CceECCCCCE
Confidence 4478999976321 29999999999999999999854 588999999999999999 884 5789999999
Q ss_pred EEECCCceEEEEEEec
Q 005770 643 IEFGSDKKAIFRVKVI 658 (678)
Q Consensus 643 i~~g~~~~~~~~~~~~ 658 (678)
|.||+.. .|+|..|
T Consensus 131 I~~G~~~--~Frf~~P 144 (154)
T 4ejq_A 131 IIMGKSH--VFRFNHP 144 (154)
T ss_dssp EEETTTE--EEEEECH
T ss_pred EEECCcE--EEEEcCh
Confidence 9999875 4888765
No 58
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.47 E-value=7e-14 Score=149.15 Aligned_cols=87 Identities=24% Similarity=0.309 Sum_probs=75.0
Q ss_pred cceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEecCCCCceeecCCCCcEE
Q 005770 557 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 636 (678)
Q Consensus 557 ~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~ 636 (678)
..+.+. +..++|||.++ |||+++++.|||+||+|.++++.|+|+|++|+|||||||. ++. +++.
T Consensus 299 ~~~~l~----~~~~~iGR~~~-----~di~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~--~~~~ 362 (388)
T 2ff4_A 299 RGYPLQ----AAATRIGRLHD-----NDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHE-----RIR--SAVT 362 (388)
T ss_dssp CEEECC----SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS--SEEE
T ss_pred cEEEEC----CCCEEEecCCC-----CeEEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCE-----ECC--CceE
Confidence 445544 66899999998 9999999999999999999999999999999999999999 874 5789
Q ss_pred eCCCCEEEECCCceEEEEEEeccCCC
Q 005770 637 FRPSDTIEFGSDKKAIFRVKVIGTPP 662 (678)
Q Consensus 637 l~~gd~i~~g~~~~~~~~~~~~~~~~ 662 (678)
|++||+|+||+. .|+|......|
T Consensus 363 L~~gd~i~~G~~---~~~~~~~~~~p 385 (388)
T 2ff4_A 363 LNDGDHIRICDH---EFTFQISAGTH 385 (388)
T ss_dssp ECTTCEEEETTE---EEEEECSCCCC
T ss_pred CCCCCEEEECCE---EEEEEeCCCCC
Confidence 999999999986 47777664333
No 59
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.47 E-value=2.4e-13 Score=146.21 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=50.0
Q ss_pred EeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCe-EEEEEcCCcEEeccEEEEecCCCc-hhhhhh
Q 005770 186 VISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWS-KVRKNL 250 (678)
Q Consensus 186 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~-v~v~~~dg~~i~a~~vVgADG~~S-~VR~~l 250 (678)
.++...+.+.|.+.+ .+..++++++|++++.+++. +.|++.+| +++||.||.|+|.+| .+++.+
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~ 237 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMA 237 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHc
Confidence 456667777777765 23468889999999987665 45777777 799999999999998 677766
No 60
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.42 E-value=1.1e-12 Score=139.92 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=52.8
Q ss_pred EEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch-hhhhh
Q 005770 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK-VRKNL 250 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~-VR~~l 250 (678)
..++...+.+.|.+.+. +..++.+++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+.+
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~ 226 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQL 226 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHT
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhc
Confidence 45677888888887762 346888999999998888888888777 8999999999999987 66655
No 61
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.40 E-value=9.3e-13 Score=130.23 Aligned_cols=99 Identities=23% Similarity=0.357 Sum_probs=74.6
Q ss_pred eEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEe-----------CCEEEEEeCC
Q 005770 544 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-----------DGAFYLIDLQ 612 (678)
Q Consensus 544 ~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~-----------~~~~~i~Dl~ 612 (678)
|.|...++.. ++..+.+. ...++|||....+. .+|.++|+.|||+||+|..+ ...++|+||+
T Consensus 2 WiL~~~~d~~-~Gkr~~L~----pg~YlIGR~~~~~~--~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLg 74 (325)
T 3huf_A 2 WIIEAEGDIL-KGKSRILF----PGTYIVGRNVSDDS--SHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLD 74 (325)
T ss_dssp EEEEESTTTT-TTCCEEEC----SEEEEEESSCCCBT--TEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECS
T ss_pred cEEeccCccC-CCeEEEec----CCeEEECCCCCccC--ceeecCCCCccccceEEEEecccccccccCCcceEEEEECC
Confidence 7777654322 44555555 33499999876311 34688999999999999886 2479999999
Q ss_pred CCCceEecCCCCceeecCCCCcEEe-CCCCEEEECCCceEEEEEE
Q 005770 613 SEHGTYVTDNEGRRYRVSSNFPARF-RPSDTIEFGSDKKAIFRVK 656 (678)
Q Consensus 613 S~nGt~v~~~~~~~~~~~~~~~~~l-~~gd~i~~g~~~~~~~~~~ 656 (678)
|+|||||||+ ++.+. .+.| .+||.|+||..... |+++
T Consensus 75 SknGTfVNGe-----rI~~~-~~~L~~dgd~I~fG~~~~~-fRl~ 112 (325)
T 3huf_A 75 TKFGTKVNEK-----VVGQN-GDSYKEKDLKIQLGKCPFT-INAY 112 (325)
T ss_dssp CSSCEEETTE-----ECCTT-CEEECSSEEEEEETTCSSC-EEEE
T ss_pred CCCCEEECCE-----ECCCc-eeeecCCCCEEEecCCcce-EEEE
Confidence 9999999999 88654 4555 58999999997665 7776
No 62
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.37 E-value=1.7e-12 Score=130.77 Aligned_cols=36 Identities=33% Similarity=0.517 Sum_probs=33.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
.+||+||||||+||+||+.|+++|++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 479999999999999999999999999999997643
No 63
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.34 E-value=7e-12 Score=133.73 Aligned_cols=64 Identities=13% Similarity=0.203 Sum_probs=51.9
Q ss_pred EeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEE-EEEcCCcEEeccEEEEecCCCc-hhhhhh
Q 005770 186 VISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWS-KVRKNL 250 (678)
Q Consensus 186 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~-v~~~dg~~i~a~~vVgADG~~S-~VR~~l 250 (678)
.++...+.+.|.+.+ .+..++.+++|++++.+++++. |++.+| +++||.||.|+|.+| .+.+.+
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~ 212 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMA 212 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHH
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHc
Confidence 567788888887766 2346888999999998888887 888777 899999999999998 456655
No 64
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.30 E-value=4.1e-11 Score=137.61 Aligned_cols=62 Identities=11% Similarity=0.062 Sum_probs=53.2
Q ss_pred EEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 184 TRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 184 ~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
...++...+...|.+.+ .+..++++++|++++.++++|.|++.+|.+++||.||.|+|.+|.
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 45677888888888766 235688999999999999999999988889999999999999986
No 65
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.28 E-value=4.1e-11 Score=137.77 Aligned_cols=62 Identities=11% Similarity=0.026 Sum_probs=51.5
Q ss_pred EEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCCc-EEeccEEEEecCCCch
Q 005770 184 TRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDLLIGADGIWSK 245 (678)
Q Consensus 184 ~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg~-~i~a~~vVgADG~~S~ 245 (678)
...++...+...|.+.+ .+..++++++|++++.++++|.|++.+|+ +++||.||.|+|.+|.
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 35677888888888765 23568899999999998888999998887 8999999999999975
No 66
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.25 E-value=1.6e-10 Score=123.37 Aligned_cols=60 Identities=25% Similarity=0.367 Sum_probs=48.6
Q ss_pred EEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
..++...+.+.|.+.+. +..++.+++|++++.+++++.+++.+| +++||.||.|+|++|.
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH
Confidence 45667788888877662 346888999999998888888887666 7999999999999875
No 67
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.24 E-value=2.7e-11 Score=103.46 Aligned_cols=97 Identities=15% Similarity=0.288 Sum_probs=81.4
Q ss_pred CceEEEecCCCCCcCcceeeecccCCCcEEeCCCC-CCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCceEec
Q 005770 542 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 620 (678)
Q Consensus 542 ~~~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~-~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v~ 620 (678)
..|-|-...+.. .+..+.+. ...++||.++ . |||+|.|+.||+.||+|..++++|+|. +|+||||+|
T Consensus 3 ~~~klrvlsG~~-~G~~l~L~----~~~~~IGs~~~~-----~DLvL~D~~Vs~~H~~L~~~~~g~~L~--~s~ngt~vd 70 (123)
T 4a0e_A 3 GSWVCRFYQGKH-RGVEVELP----HGRCVFGSDPLQ-----SDIVLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQE 70 (123)
T ss_dssp CCEEEEECSGGG-TTCEEEEC----SEEEEEESCTTT-----CSEECCCTTSCSSCEEEEEETTEEEEE--EESSCCEET
T ss_pred ceEEEEEecCCC-CCcEEEcC----CCcEEECCCCCC-----CCEEEeCCCccceeEEEEECCCeEEEE--eccCCEEEC
Confidence 358777777765 45566666 6789999998 8 999999999999999999999999998 699999999
Q ss_pred CCCCceeecCCCCcEEeCCCCEEEECCCceEEEEEEeccC
Q 005770 621 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGT 660 (678)
Q Consensus 621 ~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~~~ 660 (678)
|. ++..+ ..|.+|+.|++|.. +|.|.....
T Consensus 71 G~-----~v~~~--~~L~~g~~l~lG~~---~l~~~~~~~ 100 (123)
T 4a0e_A 71 GL-----PVPLG--TLLRAGSCLEVGFL---LWTFVAVGQ 100 (123)
T ss_dssp TE-----ECCTT--CBCCTTSCEEETTE---EEEEEETTS
T ss_pred CE-----Ecccc--cccCCCCEEEEccE---EEEEEcCCC
Confidence 99 76644 38999999999987 577776644
No 68
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.23 E-value=6e-10 Score=117.72 Aligned_cols=66 Identities=9% Similarity=0.163 Sum_probs=53.1
Q ss_pred EEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCe-EEEEEcCC--cEEeccEEEEecCCCc-hhhhhh
Q 005770 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK-VSVVLENG--QCYAGDLLIGADGIWS-KVRKNL 250 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~-v~v~~~dg--~~i~a~~vVgADG~~S-~VR~~l 250 (678)
..++...+.+.|.+.+ .+..++++++|++++.++++ +.|++.+| .+++||.||.|+|.+| .+.+.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred EEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 4577888888888776 23568889999999988766 88888888 4899999999999998 455544
No 69
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.21 E-value=6.8e-10 Score=122.76 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=51.5
Q ss_pred EEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEc---CCc--EEeccEEEEecCCCch-hhhh
Q 005770 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLE---NGQ--CYAGDLLIGADGIWSK-VRKN 249 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~---dg~--~i~a~~vVgADG~~S~-VR~~ 249 (678)
..++...+...|.+.+ .+..++.+++|+++..+++.+.|++. +|+ +++||.||.|+|.+|. +++.
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~ 216 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDD 216 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHH
Confidence 4578888988888776 23468889999999988877777774 565 7999999999999986 4553
No 70
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.20 E-value=1.4e-10 Score=123.27 Aligned_cols=65 Identities=17% Similarity=0.314 Sum_probs=53.3
Q ss_pred EEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch-hhhhh
Q 005770 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK-VRKNL 250 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~-VR~~l 250 (678)
..++...+...|.+.+. +..++++++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+.+
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHH
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHh
Confidence 56788888888887762 346888999999999999988888877 8999999999999984 55544
No 71
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.19 E-value=2e-11 Score=98.68 Aligned_cols=74 Identities=16% Similarity=0.241 Sum_probs=61.9
Q ss_pred CCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeCCEEEEEeCCCCCc-eEecCCCCceeecCCCCcEEeCCCCE--
Q 005770 566 ENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHG-TYVTDNEGRRYRVSSNFPARFRPSDT-- 642 (678)
Q Consensus 566 ~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nG-t~v~~~~~~~~~~~~~~~~~l~~gd~-- 642 (678)
+...+.|||++. +++.|+++.||+.||.|...+.+.++. . |+|| +||||. ++ .++.|..||.
T Consensus 19 ~~~~~rIGR~~~-----~~l~LddpsVs~~HAti~~~~~G~~~l-~-S~nGtVFVNGq-----rv---~~~~I~~gDtI~ 83 (102)
T 3uv0_A 19 ADTIYRIGRQKG-----LEISIADESMELAHATACILRRGVVRL-A-ALVGKIFVNDQ-----EE---TVVDIGMENAVA 83 (102)
T ss_dssp TTCCEEEESSTT-----STEECCCTTSCTTCEEEEEEETTEEEE-E-ESSSCEEETTE-----EE---SEEEECGGGCBT
T ss_pred cCcEEEEcCCCC-----CcEEECCcccccceEEEEecCCceEEE-E-eccCcEEECCE-----Ee---eeEEccCCcccc
Confidence 467899999998 899999999999999999876555553 2 9999 599999 77 4889999999
Q ss_pred ----EEECCCceEEEEE
Q 005770 643 ----IEFGSDKKAIFRV 655 (678)
Q Consensus 643 ----i~~g~~~~~~~~~ 655 (678)
++||+.+.. ++|
T Consensus 84 g~v~lrFGnvea~-l~~ 99 (102)
T 3uv0_A 84 GKVKLRFGNVEAR-LEF 99 (102)
T ss_dssp TEEEEEETTEEEE-EEE
T ss_pred cEEEEEecCEEEE-EEe
Confidence 899997544 444
No 72
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.18 E-value=1.2e-10 Score=125.33 Aligned_cols=147 Identities=19% Similarity=0.176 Sum_probs=88.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCC---cccccce-----------eeC-hhHHHHHHhcCh
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGE---GQYRGPI-----------QIQ-SNALAALEAIDL 138 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~---g~~~~~~-----------~l~-~~~~~~L~~l~~ 138 (678)
++..+||+|||||++|+++|+.|+++|++|+|+|+.+...... |.....+ .-. ......+..+..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 4557899999999999999999999999999999986432110 0000000 000 011223333311
Q ss_pred -hHHHHHHHhccccccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEE
Q 005770 139 -DVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFK 215 (678)
Q Consensus 139 -gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~ 215 (678)
.+.+.+...+. . +..... +..+ .......+.+.|.+.+. +..++++++|++++
T Consensus 104 ~~~~~~~~~~Gi----~---~~~~~~----------------g~~~-~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~ 159 (417)
T 3v76_A 104 QDFVALVERHGI----G---WHEKTL----------------GQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVE 159 (417)
T ss_dssp HHHHHHHHHTTC----C---EEECST----------------TEEE-ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred HHHHHHHHHcCC----C---cEEeeC----------------CEEe-eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 11111111110 0 000000 1111 13356677777777663 34688999999999
Q ss_pred EeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 216 DHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 216 ~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
.+++++.|++.+| +++||.||.|+|.+|.
T Consensus 160 ~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 160 RTASGFRVTTSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp EETTEEEEEETTE-EEEESEEEECCCCSSC
T ss_pred EeCCEEEEEECCc-EEEeeEEEECCCCccC
Confidence 9999999999888 8999999999999993
No 73
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.16 E-value=3.4e-10 Score=121.26 Aligned_cols=65 Identities=18% Similarity=0.212 Sum_probs=51.3
Q ss_pred EEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCC-chhhhhh
Q 005770 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW-SKVRKNL 250 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~-S~VR~~l 250 (678)
..++...+...|.+.+ .+..++++++|++++.++++|+|+..+| +++||.||.|+|++ +.+++.+
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 215 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPL 215 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGG
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhc
Confidence 3566777777777765 2346888999999999888888877665 79999999999998 4566665
No 74
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.14 E-value=5.3e-10 Score=114.04 Aligned_cols=138 Identities=17% Similarity=0.250 Sum_probs=87.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCcEEEEecccccccCC---cccccceeeChhHHHHHHhcChhHHHHHHHhcccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGE---GQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~-g~~~~~~e~~~~~~~~~---g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~ 151 (678)
..+||+||||||+|+++|+.|+++ |++|+|+|+.+.+.... +..-..+.+.....+.|+.+ |+ .
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~--G~---------~- 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI--GV---------A- 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH--TC---------C-
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc--CC---------C-
Confidence 457999999999999999999997 99999999986432111 00000122223333333333 11 0
Q ss_pred ccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc-C--CceEEeCCeEEEEEEeCCeE-EEEEc-
Q 005770 152 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV-G--DEIILNESNVIDFKDHGDKV-SVVLE- 226 (678)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~-~--~~~i~~~~~v~~~~~~~~~v-~v~~~- 226 (678)
. .. .+ .+....++..+...|.+.+ . +..++++++|+++..+++.+ .+.+.
T Consensus 106 ---~---~~--~~-----------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~ 160 (284)
T 1rp0_A 106 ---Y---DE--QD-----------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNW 160 (284)
T ss_dssp ---C---EE--CS-----------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEE
T ss_pred ---c---cc--CC-----------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEec
Confidence 0 00 00 0011225666777776665 2 34688999999999887754 23332
Q ss_pred --------CC-----cEEeccEEEEecCCCchhhhhh
Q 005770 227 --------NG-----QCYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 227 --------dg-----~~i~a~~vVgADG~~S~VR~~l 250 (678)
+| .+++||+||.|+|.+|.++...
T Consensus 161 ~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 161 ALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 32 5799999999999999998765
No 75
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.12 E-value=3.9e-10 Score=93.71 Aligned_cols=93 Identities=17% Similarity=0.279 Sum_probs=74.4
Q ss_pred eEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEe--CCEEEEEeCCCCCceEecC
Q 005770 544 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 621 (678)
Q Consensus 544 ~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~v~~ 621 (678)
+.|....+.. .++.+. ++..++|||++. + .+.|..+||+|++|..+ .+.+.|.|+| +|+|+|||
T Consensus 5 c~L~~~~~~~---~~I~L~---~g~~v~iGR~p~-----t--~I~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng 70 (102)
T 3kt9_A 5 CWLVRQDSRH---QRIRLP---HLEAVVIGRGPE-----T--KITDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDS 70 (102)
T ss_dssp EEEEETTSTT---CEEECC---BTCEEEECSSTT-----T--CCCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETT
T ss_pred EEEEecCCCC---CcEEcC---CCCcEEeccCCc-----c--ccccCcccCcceEEEEecCCCEEEEEECc-CCCCeECC
Confidence 4555554432 456665 255677899998 4 45799999999999998 5688999995 99999999
Q ss_pred CCCceeecCCCCcEEeCCCCEEEECCCceEEEEEE
Q 005770 622 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 656 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~ 656 (678)
. ++.+++.+.|++||+|.+-..... |+|+
T Consensus 71 ~-----~l~k~~~~~L~~GD~l~Ll~~~~~-~~v~ 99 (102)
T 3kt9_A 71 V-----VIGKDQEVKLQPGQVLHMVNELYP-YIVE 99 (102)
T ss_dssp E-----ECCBTCEEEECTTCCEEEETTEEE-EEEE
T ss_pred E-----EcCCCCeEEeCCCCEEEEccCCce-EEEE
Confidence 8 999999999999999999987555 6654
No 76
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.12 E-value=3.7e-11 Score=130.98 Aligned_cols=161 Identities=17% Similarity=0.191 Sum_probs=90.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccc-eeeCh--hHHHHHHhcCh--h-HHHHHHHhcc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGP-IQIQS--NALAALEAIDL--D-VAEEVMRAGC 149 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~-~~l~~--~~~~~L~~l~~--g-l~~~~~~~~~ 149 (678)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..........++ ..+.. ..-++++.+.. . +...+.....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 45899999999999999999999999999999976432100000000 00100 00122222210 0 0000000000
Q ss_pred ccccceeeeeecCCCceeeeccCCCcccccCCCeEEEe----CHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCe-EE
Q 005770 150 VTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVI----SRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK-VS 222 (678)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~-v~ 222 (678)
.....+... .+. .+.. ... +... ....+.+.|.+.+ .+..++++++|+++..++++ +.
T Consensus 105 ---~~~~~~~~~-~G~---~~~~----~~~----g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~ 169 (447)
T 2i0z_A 105 ---EDIITFFEN-LGV---KLKE----EDH----GRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKA 169 (447)
T ss_dssp ---HHHHHHHHH-TTC---CEEE----CGG----GEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEE
T ss_pred ---HHHHHHHHh-cCC---ceEE----eeC----CEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEE
Confidence 000000000 000 0000 000 1111 2456666776665 24568899999999987777 77
Q ss_pred EEEcCCcEEeccEEEEecCCCc-----------hhhhhhc
Q 005770 223 VVLENGQCYAGDLLIGADGIWS-----------KVRKNLF 251 (678)
Q Consensus 223 v~~~dg~~i~a~~vVgADG~~S-----------~VR~~l~ 251 (678)
|++.+|++++||.||.|+|..| .+++.++
T Consensus 170 V~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G 209 (447)
T 2i0z_A 170 VILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAG 209 (447)
T ss_dssp EEETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTT
T ss_pred EEECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCC
Confidence 8888888899999999999999 6776663
No 77
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.12 E-value=6.4e-10 Score=114.83 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=86.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccccccCC---cccccceeeChhHHHHHHhcChhHHHHHHHhccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGE---GQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~~~~~~---g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~ 150 (678)
..+||+||||||+|+++|+.|+++ |++|+|+|+...+..+. +.......+.+...+.|+.+ |+ .
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~--Gv---------~ 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEV--GV---------P 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHH--TC---------C
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHc--CC---------c
Confidence 458999999999999999999998 99999999986432110 00001122334445555544 21 0
Q ss_pred cccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc---CCceEEeCCeEEEEEEeCC--------
Q 005770 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGD-------- 219 (678)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~~~~~~~-------- 219 (678)
+ .. .+. +....+...+.+.|.+.+ .+..++++++++++..+++
T Consensus 147 ----~---~~--~G~-----------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~ 200 (344)
T 3jsk_A 147 ----Y---ED--EGD-----------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSS 200 (344)
T ss_dssp ----C---EE--CSS-----------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------
T ss_pred ----c---cc--cCC-----------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccc
Confidence 0 00 000 011223456667776655 2446888999999977652
Q ss_pred -----------e---EEEEE----c--------CCcEEeccEEEEecCCCchhhhhh
Q 005770 220 -----------K---VSVVL----E--------NGQCYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 220 -----------~---v~v~~----~--------dg~~i~a~~vVgADG~~S~VR~~l 250 (678)
. +.+.. . ++.+++|++||+|+|..|+|++.+
T Consensus 201 ~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 201 DDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp --------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred cccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 2 22221 1 224799999999999999987766
No 78
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.10 E-value=2.4e-10 Score=126.47 Aligned_cols=58 Identities=17% Similarity=0.176 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEE-EEEcCCcEEeccEEEEecCCCch
Q 005770 188 SRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 188 ~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~-v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
....+.+.|.+.+ .+..++++++|++++.+++++. |++.+|++++||+||.|||++|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 3455666666654 2456899999999998877654 88899999999999999999995
No 79
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.09 E-value=6.7e-10 Score=120.65 Aligned_cols=61 Identities=10% Similarity=0.069 Sum_probs=51.7
Q ss_pred EEeCHHHHHHHHHHhc--CCceEEeCC---eEEEEEEeCCeEE-EEEcCCcEEeccEEEEecCCCch
Q 005770 185 RVISRMTLQQILAKAV--GDEIILNES---NVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~---~v~~~~~~~~~v~-v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
..++...+...|.+.+ .+..+++++ +|+++..++++++ |++.+|++++||.||.|+|++|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 4667778888887766 235688899 9999999888988 99999989999999999999985
No 80
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.05 E-value=7.7e-10 Score=117.29 Aligned_cols=60 Identities=17% Similarity=0.254 Sum_probs=48.4
Q ss_pred EEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
..++...+.+.|.+.+ .+..++.+++|++++.+++++.+++.+|+ ++||.||.|+|.+|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 4566777777777765 23468889999999988888888887774 999999999999873
No 81
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.05 E-value=1.8e-09 Score=121.08 Aligned_cols=63 Identities=16% Similarity=0.116 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHhc--CCceEEeCCeEEEEEEeC-CeEE-EEE--cCCc--EEeccEEEEecCCCchhhhhh
Q 005770 188 SRMTLQQILAKAV--GDEIILNESNVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 188 ~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~-~~v~-v~~--~dg~--~i~a~~vVgADG~~S~VR~~l 250 (678)
....+.+.|.+.+ .+..++++++|+++..++ +.|. |++ .+|+ +++||.||.|+|..|..|+.+
T Consensus 248 ~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 4566777777765 234588999999998877 6443 443 4775 689999999999999987766
No 82
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.04 E-value=1.4e-09 Score=121.17 Aligned_cols=154 Identities=17% Similarity=0.287 Sum_probs=93.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCccccccee-eC-hhHHHHHHhcChhHHHHHHHhcccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ-IQ-SNALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~-l~-~~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
..+||+|||||++|+++|+.|++.|.+|+|+|+........+.. .... +. ....+.++.++ +.......... .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cn-ps~ggia~~~lv~ei~alg-g~~~~~~d~~g---i 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCN-PAIGGIGKGHLVKEVDALG-GLMAKAIDQAG---I 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSS-SEEESTTHHHHHHHHHHTT-CSHHHHHHHHE---E
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccccc-ccccchhhHHHHHHHHHhc-cHHHHHhhhcc---c
Confidence 46899999999999999999999999999999874221111100 0111 11 11223334442 21111111100 0
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC---CceEEeCCeEEEEEEeCCeE-EEEEcCCc
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQ 229 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~~~~~~~~v-~v~~~dg~ 229 (678)
.+. ......+ + ........+++..+...|.+.+. +..+ ++++|+++..+++.+ .|.+.+|.
T Consensus 102 ~f~-~l~~~kg----------p---av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~ 166 (651)
T 3ces_A 102 QFR-ILNASKG----------P---AVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGL 166 (651)
T ss_dssp EEE-EESTTSC----------G---GGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSE
T ss_pred chh-hhhcccC----------c---ccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCC
Confidence 000 0000000 0 00111346788888888888763 3345 578999998777765 57788898
Q ss_pred EEeccEEEEecCCCchhhhh
Q 005770 230 CYAGDLLIGADGIWSKVRKN 249 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~VR~~ 249 (678)
+++||.||.|+|.+|..+..
T Consensus 167 ~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 167 KFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp EEEEEEEEECCSTTTCCEEE
T ss_pred EEECCEEEEcCCCCccCccc
Confidence 99999999999999987754
No 83
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.04 E-value=1.1e-10 Score=134.07 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=71.5
Q ss_pred ccCcccccCCcccccccccccccccccccccCCCcccccccccccCCCCCC-----CCCCCCCCeEEEECCCHHHHHHHH
Q 005770 20 THFPVPVYKHSCIEFSRYDHCINYKFRTGTSGQSKNPTQMKAAVAESPTNN-----SDSENKKLRILVAGGGIGGLVFAL 94 (678)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~ivG~G~~G~~~a~ 94 (678)
-.|++|+..++.++|++|++|++|...........|. +|+....+.... ..+....+||+||||||+|+++|.
T Consensus 331 P~~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~--vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~ 408 (690)
T 3k30_A 331 PFLPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCT--QNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAAR 408 (690)
T ss_dssp TTHHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCS--SCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHH
T ss_pred ccHHHHHHcCCccccccccchhhhhhcccCCCcccCC--cCcccCcccccccCccccCcccccceEEEECCCHHHHHHHH
Confidence 4689999999999999999999976554444445665 888777664321 223455689999999999999999
Q ss_pred HHHHcCCcEEEEeccc
Q 005770 95 AAKRKGFEVLVFEKDM 110 (678)
Q Consensus 95 ~l~~~g~~~~~~e~~~ 110 (678)
.|+++|++|+|+|+.+
T Consensus 409 ~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 409 ALGVRGYDVVLAEAGR 424 (690)
T ss_dssp HHHHHTCEEEEECSSS
T ss_pred HHHHCCCeEEEEecCC
Confidence 9999999999999974
No 84
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.02 E-value=2.7e-09 Score=105.29 Aligned_cols=125 Identities=16% Similarity=0.185 Sum_probs=84.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcC-hhHHHHHHHhccccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAID-LDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~-~gl~~~~~~~~~~~~~~ 154 (678)
+.+||+|||||++|+++|+.|+++|++|+|+|+..... | ....+. +..+. ..+..++
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~---G-----~~~~~~----~~~~~~~~~~~~~---------- 59 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV---M-----MPFLPP----KPPFPPGSLLERA---------- 59 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT---T-----CCSSCC----CSCCCTTCHHHHH----------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC---C-----cccCcc----ccccchhhHHhhh----------
Confidence 46899999999999999999999999999999973211 1 001110 00000 0000000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC---CceEEeCCeEEEEEEeCCeE-EEEEcCCcE
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQC 230 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~~~~~~~~v-~v~~~dg~~ 230 (678)
+. ..+ + ++..+.+.|.+.+. +..++ +++|+++..+++.+ .+.+.+|++
T Consensus 60 ----------------~d-----~~g-~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~ 111 (232)
T 2cul_A 60 ----------------YD-----PKD-E-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP 111 (232)
T ss_dssp ----------------CC-----TTC-C-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC
T ss_pred ----------------cc-----CCC-C-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE
Confidence 00 001 1 56778888877763 33455 67999999887775 577888889
Q ss_pred EeccEEEEecCCCchhhhhh
Q 005770 231 YAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 231 i~a~~vVgADG~~S~VR~~l 250 (678)
++||+||.|+|.+|..+..+
T Consensus 112 i~a~~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 112 ARGEKVVLAVGSFLGARLFL 131 (232)
T ss_dssp EECSEEEECCTTCSSCEEEE
T ss_pred EECCEEEECCCCChhhceec
Confidence 99999999999999888755
No 85
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.02 E-value=2.7e-09 Score=116.80 Aligned_cols=56 Identities=20% Similarity=0.209 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCchh
Q 005770 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 246 (678)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~V 246 (678)
.|.+.|.+.+....++++++|++|+.++++++|++.+|++++||.||.|-......
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 45666666665456899999999999988999999999899999999999877643
No 86
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.01 E-value=4.9e-09 Score=117.23 Aligned_cols=67 Identities=21% Similarity=0.231 Sum_probs=51.8
Q ss_pred EEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEE-EEEcC---C--cEEeccEEEEecCCCc-hhhhhhc
Q 005770 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLEN---G--QCYAGDLLIGADGIWS-KVRKNLF 251 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~-v~~~d---g--~~i~a~~vVgADG~~S-~VR~~l~ 251 (678)
..++...|...|.+.+ .+..++.+++|+++..+++++. |++.| | .+++|+.||.|+|.+| .+++.++
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g 240 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDR 240 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTT
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcC
Confidence 3678888888887765 3446888999999999888753 66653 4 3799999999999998 6777653
No 87
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.00 E-value=1.3e-09 Score=116.83 Aligned_cols=146 Identities=19% Similarity=0.196 Sum_probs=83.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccC-----Cccc--cc-ce----ee--Chh-HHHHHHhcCh-
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRG-----EGQY--RG-PI----QI--QSN-ALAALEAIDL- 138 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~-----~g~~--~~-~~----~l--~~~-~~~~L~~l~~- 138 (678)
|..+||+||||||+|+++|+.|+++|.+|+|+|+.+..... .|.. .. .. .+ .+. ....+..+..
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 34689999999999999999999999999999998643110 0000 00 00 00 000 0112222210
Q ss_pred hHHHHHHHhccccccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEE
Q 005770 139 DVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKD 216 (678)
Q Consensus 139 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~ 216 (678)
.+.+.+...+. .. .....+. . + | .. ....+.+.|.+.+. +..++++++|+++..
T Consensus 82 ~~~~~~~~~Gi----~~---~~~~~g~-~--~-----------p--~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~ 137 (401)
T 2gqf_A 82 DFISLVAEQGI----TY---HEKELGQ-L--F-----------C--DE-GAEQIVEMLKSECDKYGAKILLRSEVSQVER 137 (401)
T ss_dssp HHHHHHHHTTC----CE---EECSTTE-E--E-----------E--TT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEE
T ss_pred HHHHHHHhCCC----ce---EECcCCE-E--c-----------c--CC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEc
Confidence 01111111111 00 0000000 0 0 0 00 34556666666552 346889999999987
Q ss_pred e----CCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 217 H----GDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 217 ~----~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
+ ++++.|++.+| +++||.||.|+|..|.
T Consensus 138 ~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 138 IQNDEKVRFVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CCSCSSCCEEEEETTE-EEEESEEEECCCCSSC
T ss_pred ccCcCCCeEEEEECCC-EEECCEEEECCCCccC
Confidence 6 56788888776 7999999999999993
No 88
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.98 E-value=1.2e-09 Score=117.50 Aligned_cols=65 Identities=15% Similarity=0.068 Sum_probs=47.1
Q ss_pred EEeCHHHHHHHHHHhcC--CceEEeCCeEE---------EEEEeCCeEEEEEcCCcEEeccEEEEecCCCc-hhhh-hh
Q 005770 185 RVISRMTLQQILAKAVG--DEIILNESNVI---------DFKDHGDKVSVVLENGQCYAGDLLIGADGIWS-KVRK-NL 250 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~---------~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S-~VR~-~l 250 (678)
..++...+...|.+.+. +..++++++|+ +++.+++.+.|++.+| +++||+||.|+|++| .+++ .+
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~ 244 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGL 244 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHH
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhc
Confidence 46788889998888763 34688899999 8887777776666666 899999999999999 6777 65
No 89
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.98 E-value=3.9e-09 Score=117.66 Aligned_cols=153 Identities=18% Similarity=0.266 Sum_probs=91.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCccccccee-e-ChhHHHHHHhcChhHHHHHHHhccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ-I-QSNALAALEAIDLDVAEEVMRAGCVTG 152 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~-l-~~~~~~~L~~l~~gl~~~~~~~~~~~~ 152 (678)
...+||+|||||++|+++|+.|+++|.+|+|+|+........+.. .... + ....++.++.++ ++..........
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~-ps~gGia~~~lv~el~al~-g~~~~~~d~~gi-- 94 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCN-PAIGGVAKGQITREIDALG-GEMGKAIDATGI-- 94 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC-SEEECHHHHHHHHHHHHHT-CSHHHHHHHHEE--
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccc-cchhhhhHHHHHHHHHhcc-cHHHHHHHhcCC--
Confidence 345899999999999999999999999999999974221111100 0010 0 011122223222 221111111000
Q ss_pred cceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC---CceEEeCCeEEEEEEeCCeEE-EEEcCC
Q 005770 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKVS-VVLENG 228 (678)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~~~~~~~~v~-v~~~dg 228 (678)
.+. ..+...+ + ........+++..+...|.+.+. +..+ ++.+|+++..+++.+. |.+.+|
T Consensus 95 -~f~-~l~~~kg----------p---av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~g~V~GV~t~~G 158 (641)
T 3cp8_A 95 -QFR-MLNRSKG----------P---AMHSPRAQADKTQYSLYMRRIVEHEPNIDL-LQDTVIGVSANSGKFSSVTVRSG 158 (641)
T ss_dssp -EEE-EECSSSC----------T---TTCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEEETTEEEEEEETTS
T ss_pred -chh-hcccccC----------c---cccchhhhcCHHHHHHHHHHHHHhCCCCEE-EeeEEEEEEecCCEEEEEEECCC
Confidence 000 0000000 0 00111356889899888888763 3345 4569999988888877 888889
Q ss_pred cEEeccEEEEecCCCchhh
Q 005770 229 QCYAGDLLIGADGIWSKVR 247 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~VR 247 (678)
++++||.||.|+|.++..+
T Consensus 159 ~~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 159 RAIQAKAAILACGTFLNGL 177 (641)
T ss_dssp CEEEEEEEEECCTTCBTCE
T ss_pred cEEEeCEEEECcCCCCCcc
Confidence 9999999999999987644
No 90
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.97 E-value=2e-09 Score=113.57 Aligned_cols=123 Identities=16% Similarity=0.265 Sum_probs=84.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+|+++|+.|+++|++|+|||+.+.. | |.+... .+...
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~-----~~~~~ 61 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL----G---------------------GQLAAL-----YPEKH 61 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHT-----CTTSE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC----C---------------------Cccccc-----CCCcc
Confidence 44689999999999999999999999999999987421 1 111100 00000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCC-eEEEEEcCCcEE
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVSVVLENGQCY 231 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~-~v~v~~~dg~~i 231 (678)
+. + .. +.+ .+.+..+.+.|.+.+. ...++++++|++++.+++ .++|++.+|+++
T Consensus 62 ~~---~---------~~--------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~ 118 (360)
T 3ab1_A 62 IY---D---------VA--------GFP---EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVY 118 (360)
T ss_dssp EC---C---------ST--------TCS---SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEE
T ss_pred cc---c---------CC--------CCC---CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEE
Confidence 00 0 00 011 1345666666666552 245778999999998765 788999999899
Q ss_pred eccEEEEecCCCchhhhhh
Q 005770 232 AGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 232 ~a~~vVgADG~~S~VR~~l 250 (678)
++|+||.|+|.+|..++.+
T Consensus 119 ~~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 119 RSRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp EEEEEEECCTTCSCCBCCC
T ss_pred EeeEEEEccCCCcCCCCCC
Confidence 9999999999988666544
No 91
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.97 E-value=8.9e-09 Score=115.69 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhc--CCceEEeCCeEEEEEEeC-CeEE-EEEc--CCc--EEeccEEEEecCCCchhhhhh
Q 005770 189 RMTLQQILAKAV--GDEIILNESNVIDFKDHG-DKVS-VVLE--NGQ--CYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 189 r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~-~~v~-v~~~--dg~--~i~a~~vVgADG~~S~VR~~l 250 (678)
...+.+.|.+.+ .+..++++++|+++..++ +.|. |.+. +|+ +++||.||.|+|..|..++.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 456777777665 245689999999998876 5433 3333 675 789999999999999866544
No 92
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.97 E-value=4.1e-09 Score=117.06 Aligned_cols=154 Identities=17% Similarity=0.248 Sum_probs=93.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCccccccee-eC-hhHHHHHHhcChhHHHHHHHhcccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ-IQ-SNALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~-l~-~~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
..+||+|||||+||+++|+.|++.|.+|+|+|+........+... ... +. ....+.++.++ +.+.........
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnp-s~GGia~g~lv~eldalg-g~~~~~~d~~gi--- 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNP-AIGGIAKGIVVREIDALG-GEMGKAIDQTGI--- 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCS-EEECTTHHHHHHHHHHHT-CSHHHHHHHHEE---
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccc-cccccchHHHHHHHHHhh-hHHHHHhhhccc---
Confidence 458999999999999999999999999999999742211100000 011 11 12223344443 222222211100
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC---CceEEeCCeEEEEEEeCCeE-EEEEcCCc
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQ 229 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~~~~~~~~v-~v~~~dg~ 229 (678)
.+. ..+...+ + ........+++..+...|.+.+. +..+ ++.+|+++..+++.+ .|.+.+|+
T Consensus 101 ~f~-~l~~~kG----------p---av~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~ 165 (637)
T 2zxi_A 101 QFK-MLNTRKG----------K---AVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGV 165 (637)
T ss_dssp EEE-EESTTSC----------G---GGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSC
T ss_pred cee-ecccccC----------c---cccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCc
Confidence 000 0000000 0 00111346788888888888763 3345 578999998877766 47888899
Q ss_pred EEeccEEEEecCCCchhhhh
Q 005770 230 CYAGDLLIGADGIWSKVRKN 249 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~VR~~ 249 (678)
++.|+.||.|+|..|..+..
T Consensus 166 ~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 166 EYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp EEECSEEEECCTTCBTCEEE
T ss_pred EEEeCEEEEccCCCccCcee
Confidence 99999999999999876643
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.97 E-value=2.7e-09 Score=100.73 Aligned_cols=113 Identities=26% Similarity=0.312 Sum_probs=80.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccceee
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~~ 157 (678)
+||+|||||++|+.+|..|++.|.+|+|+|+.+...... ..+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~------------------------------------~~~~- 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV------------------------------------SRVP- 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC------------------------------------SCCC-
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc------------------------------------hhhh-
Confidence 689999999999999999999999999999874211000 0000
Q ss_pred eeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccE
Q 005770 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (678)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~ 235 (678)
. +. +.| ..+....+.+.|.+.+ .+..++.+ +|++++.+++++.+++++| ++++|+
T Consensus 45 --~---------~~--------~~~--~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~ 101 (180)
T 2ywl_A 45 --N---------YP--------GLL--DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAER 101 (180)
T ss_dssp --C---------ST--------TCT--TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEE
T ss_pred --c---------cC--------CCc--CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECE
Confidence 0 00 000 0123455666665554 23457888 9999998888888988888 899999
Q ss_pred EEEecCCCchhhhhh
Q 005770 236 LIGADGIWSKVRKNL 250 (678)
Q Consensus 236 vVgADG~~S~VR~~l 250 (678)
||.|+|.+|.+++.+
T Consensus 102 vI~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 102 LLLCTHKDPTLPSLL 116 (180)
T ss_dssp EEECCTTCCHHHHHH
T ss_pred EEECCCCCCCccccC
Confidence 999999999886665
No 94
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.96 E-value=1.6e-09 Score=113.71 Aligned_cols=129 Identities=17% Similarity=0.294 Sum_probs=83.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+|||||++|+++|..|+++|++|+|+|+.+... |.+ .. .+ .....
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g---g~~-------~~------~~--------------~~~~~ 51 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG---GAW-------QH------AW--------------HSLHL 51 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS---GGG-------GG------SC--------------TTCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC---Ccc-------cC------CC--------------CCcEe
Confidence 45899999999999999999999999999999875321 100 00 00 00000
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEE-EEEcCCcEEe
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYA 232 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~-v~~~dg~~i~ 232 (678)
. . ......+...... . .. .....+..+.+.|.+.+. +..++++++|++++.+++.+. |++.+| +++
T Consensus 52 ~---~---~~~~~~~~~~~~~-~-~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~ 120 (357)
T 4a9w_A 52 F---S---PAGWSSIPGWPMP-A-SQ--GPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWL 120 (357)
T ss_dssp S---S---CGGGSCCSSSCCC-C-CS--SSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEE
T ss_pred c---C---chhhhhCCCCCCC-C-Cc--cCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEE
Confidence 0 0 0000000000000 0 00 113456777777766542 334888999999999999998 888887 899
Q ss_pred ccEEEEecCCCch
Q 005770 233 GDLLIGADGIWSK 245 (678)
Q Consensus 233 a~~vVgADG~~S~ 245 (678)
+|+||.|+|.+|.
T Consensus 121 ~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 121 ARAVISATGTWGE 133 (357)
T ss_dssp EEEEEECCCSGGG
T ss_pred eCEEEECCCCCCC
Confidence 9999999999874
No 95
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.95 E-value=2.8e-09 Score=111.17 Aligned_cols=123 Identities=18% Similarity=0.275 Sum_probs=84.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+|+++|+.|+++|++|+|+|+.+.. | |.+... .+...
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~-----~~~~~ 52 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP----G---------------------GQLTAL-----YPEKY 52 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS----C---------------------HHHHHT-----CTTSE
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Ceeecc-----CCCce
Confidence 34689999999999999999999999999999987421 1 111000 00000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEe
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~ 232 (678)
+. + .. +.+ .+.+..+...|.+.+. ...++++++|++++.+++.+++++.+|+++.
T Consensus 53 ~~---~---------~~--------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~ 109 (335)
T 2zbw_A 53 IY---D---------VA--------GFP---KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYT 109 (335)
T ss_dssp EC---C---------ST--------TCS---SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred ee---c---------cC--------CCC---CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEE
Confidence 00 0 00 011 1234556666665542 2357789999999988888889988888999
Q ss_pred ccEEEEecCCCchhhhhh
Q 005770 233 GDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 233 a~~vVgADG~~S~VR~~l 250 (678)
+|+||.|+|.+|...+..
T Consensus 110 ~~~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 110 AKAVIIAAGVGAFEPRRI 127 (335)
T ss_dssp EEEEEECCTTSEEEECCC
T ss_pred eCEEEECCCCCCCCCCCC
Confidence 999999999988665544
No 96
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=98.95 E-value=6.4e-09 Score=87.20 Aligned_cols=95 Identities=11% Similarity=0.230 Sum_probs=71.5
Q ss_pred eEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEe--CCEEEEEeCCCCCceEecC
Q 005770 544 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 621 (678)
Q Consensus 544 ~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~v~~ 621 (678)
..|....+.. .+|.+. .....++|||++.. .+.|..+||+|+.|..+ ++.+.|.|+ ++|+|++||
T Consensus 10 c~L~~~~~~~---~~I~Lp--~~~g~~viGR~p~t-------~I~DkrcSR~hv~L~ad~~~~~v~vk~l-G~Np~~vng 76 (110)
T 2brf_A 10 LWLESPPGEA---PPIFLP--SDGQALVLGRGPLT-------QVTDRKCSRTQVELVADPETRTVAVKQL-GVNPSTTGT 76 (110)
T ss_dssp EEEECSTTSS---CCEECC--STTCCEEECSBTTT-------TBCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCEEC-
T ss_pred EEEEeCCCCC---CcEEec--cCCCCEEEcCCCCc-------ccccccceeeeEEEEEecCCCEEEEEEc-ccCCcEECC
Confidence 4455554332 344441 23578999999972 57899999999999876 688999998 799999999
Q ss_pred CCCceeecCCCCcEEeCCCCEEEECCCceEEEEEEe
Q 005770 622 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 657 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 657 (678)
. ++.+++.+.|++||+|.|=..... |++.-
T Consensus 77 ~-----~l~k~~~~~L~~GD~leLl~g~y~-~~v~f 106 (110)
T 2brf_A 77 Q-----ELKPGLEGSLGVGDTLYLVNGLHP-LTLRW 106 (110)
T ss_dssp C-----BCCTTCEEEEETTCEEEEETTEEE-EEEEE
T ss_pred E-----EcCCCCEEEecCCCEEEEccCCeE-EEEEe
Confidence 9 999999999999999998554333 55544
No 97
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.94 E-value=1e-09 Score=119.55 Aligned_cols=62 Identities=16% Similarity=0.115 Sum_probs=50.1
Q ss_pred EeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEEeCCeEEEEEcC---Cc---EEeccEEEEecCCCchhh
Q 005770 186 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLEN---GQ---CYAGDLLIGADGIWSKVR 247 (678)
Q Consensus 186 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~~~~~~~~v~v~~~d---g~---~i~a~~vVgADG~~S~VR 247 (678)
.+.+..+.+.|.+.+.. ..++++++|++++.+++.++|++.+ |+ ++.+|.||.|+|.+|.-+
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~ 180 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPY 180 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBC
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCC
Confidence 45678888888776542 3478899999999988889988876 76 799999999999987543
No 98
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.89 E-value=1.1e-09 Score=125.53 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=70.3
Q ss_pred ccCcccccCCcccccccccccccccccc-cccCCCcccccccccccCCCCCCCCCCCCCCeEEEECCCHHHHHHHHHHHH
Q 005770 20 THFPVPVYKHSCIEFSRYDHCINYKFRT-GTSGQSKNPTQMKAAVAESPTNNSDSENKKLRILVAGGGIGGLVFALAAKR 98 (678)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ivG~G~~G~~~a~~l~~ 98 (678)
-.|+.|+..+..+++++|+.|+++|... ...+...|. +|+....+...+..+....+||+||||||+|+++|..|++
T Consensus 317 P~l~~k~~~g~~~~~~~c~~c~~~C~~~~~~~~~~~C~--~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~ 394 (671)
T 1ps9_A 317 AELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCL--VNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAA 394 (671)
T ss_dssp TTHHHHHHTTCGGGCCCCCCCCTTTHHHHHTTCCCCCS--SCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHHHT
T ss_pred cHHHHHHHcCCCCCcccccccccccchhccCCCceEEE--eCcccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHh
Confidence 4688999999999999999999844432 223344565 7887776654444444567899999999999999999999
Q ss_pred cCCcEEEEeccc
Q 005770 99 KGFEVLVFEKDM 110 (678)
Q Consensus 99 ~g~~~~~~e~~~ 110 (678)
+|++|+|+|+.+
T Consensus 395 ~g~~V~lie~~~ 406 (671)
T 1ps9_A 395 RGHQVTLFDAHS 406 (671)
T ss_dssp TTCEEEEEESSS
T ss_pred CCCeEEEEeCCC
Confidence 999999999874
No 99
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.88 E-value=9.2e-09 Score=111.99 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=50.6
Q ss_pred EEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEE---------------eCCeE-EEEEcCCcEE--eccEEEEecCCC
Q 005770 184 TRVISRMTLQQILAKAV--GDEIILNESNVIDFKD---------------HGDKV-SVVLENGQCY--AGDLLIGADGIW 243 (678)
Q Consensus 184 ~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~---------------~~~~v-~v~~~dg~~i--~a~~vVgADG~~ 243 (678)
...++...+...|.+.+ .+..++.+++|++++. +++++ .|.+.+| ++ +||.||.|+|++
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 34577778888888776 2346888999999987 55554 5777777 68 999999999999
Q ss_pred ch-hhhhh
Q 005770 244 SK-VRKNL 250 (678)
Q Consensus 244 S~-VR~~l 250 (678)
|. +.+.+
T Consensus 254 s~~l~~~~ 261 (448)
T 3axb_A 254 SNRLLNPL 261 (448)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHc
Confidence 86 55554
No 100
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.87 E-value=7.5e-08 Score=107.96 Aligned_cols=62 Identities=21% Similarity=0.240 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhc--CCceEEeCCeEEEEEEeC-CeEE-EEE--cCCc--EEeccEEEEecCCCchhhhhh
Q 005770 189 RMTLQQILAKAV--GDEIILNESNVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 189 r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~-~~v~-v~~--~dg~--~i~a~~vVgADG~~S~VR~~l 250 (678)
...+...|.+.+ .+..++++++|+++..++ +.|. |.+ .+|+ ++.||.||.|+|..|..++.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 456777777665 245689999999998766 5432 443 3675 689999999999999876655
No 101
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.87 E-value=8.9e-10 Score=127.14 Aligned_cols=90 Identities=16% Similarity=0.113 Sum_probs=68.2
Q ss_pred ccCcccccCCccccccccccccccccc-ccccCCCcccccccccccCCCC-----CCCCCCCCCCeEEEECCCHHHHHHH
Q 005770 20 THFPVPVYKHSCIEFSRYDHCINYKFR-TGTSGQSKNPTQMKAAVAESPT-----NNSDSENKKLRILVAGGGIGGLVFA 93 (678)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~ivG~G~~G~~~a 93 (678)
-.|++|+..++.+++++|++|++|... ........|. +|+....+.. ....+....+||+||||||+|+++|
T Consensus 328 P~~~~~~~~g~~~~~~~ci~Cn~C~~~~~~~~~~~~C~--~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA 405 (729)
T 1o94_A 328 PFLPQKVEQGRYDDIRVCIGCNVCISRWEIGGPPMICT--QNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAA 405 (729)
T ss_dssp TTHHHHHHTTCGGGCCCCCCCCHHHHHHHHSSSCCCCS--SCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHH
T ss_pred chHHHHHHcCCccccccccccchhcccccccCCceeec--cCccccccccccccccccccccCCceEEEECCCHHHHHHH
Confidence 468899999999999999999986543 2333344565 7776664321 1122334568999999999999999
Q ss_pred HHHHHcCCcEEEEecccc
Q 005770 94 LAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 94 ~~l~~~g~~~~~~e~~~~ 111 (678)
..|+++|++|+|+|+.+.
T Consensus 406 ~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 406 RVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp HHHHHTTCEEEEECSSSS
T ss_pred HHHHHCCCeEEEEeCCCC
Confidence 999999999999999753
No 102
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.86 E-value=2.4e-08 Score=102.46 Aligned_cols=138 Identities=14% Similarity=0.173 Sum_probs=83.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccccccCCc---ccccceeeChhHHHHHHhcChhHHHHHHHhccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEG---QYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~~~~~~g---~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~ 150 (678)
..+||+||||||+|+++|+.|+++ |++|+|+|+.+....... .......+.....+.|+.++ + .
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~G--v---------~ 132 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELE--I---------P 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTT--C---------C
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhC--c---------c
Confidence 457999999999999999999999 999999999764321110 00001123333334444331 1 0
Q ss_pred cccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc---CCceEEeCCeEEEEEEeC----C--eE
Q 005770 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHG----D--KV 221 (678)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~~~~~~----~--~v 221 (678)
+ .. . +. +....+...+...|.+.+ .+..++.+++|+++..++ + .+
T Consensus 133 ----~---~~-~-g~-----------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV 186 (326)
T 2gjc_A 133 ----Y---ED-E-GD-----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTV 186 (326)
T ss_dssp ----C---EE-C-SS-----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CE
T ss_pred ----c---cc-C-CC-----------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEE
Confidence 0 00 0 10 111224456677777655 244688899999998763 2 22
Q ss_pred ---EEEE----c--------CCcEEec---------------cEEEEecCCCchhhhhh
Q 005770 222 ---SVVL----E--------NGQCYAG---------------DLLIGADGIWSKVRKNL 250 (678)
Q Consensus 222 ---~v~~----~--------dg~~i~a---------------~~vVgADG~~S~VR~~l 250 (678)
.+.. . ++.++.| ++||.|+|..|++.+.+
T Consensus 187 ~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 187 AGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp EEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred EEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 2221 1 3357999 99999999999998877
No 103
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.86 E-value=9.5e-09 Score=104.95 Aligned_cols=112 Identities=21% Similarity=0.235 Sum_probs=78.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
.+||+||||||+|+++|..|+++|++|+|+|+...... + .. ...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~---------------------~--------------~~-~~~ 45 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR---------------------F--------------AS-HSH 45 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG---------------------G--------------CS-CCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc---------------------c--------------ch-hhc
Confidence 37999999999999999999999999999998632110 0 00 000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEEeCCeEEEEEcCCcEEecc
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~ 234 (678)
. +.. ...+....+...|.+.+.. ...+...+|++++.+++++.+++.+|+++.+|
T Consensus 46 ----~--------~~~-----------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d 102 (297)
T 3fbs_A 46 ----G--------FLG-----------QDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAG 102 (297)
T ss_dssp ----S--------STT-----------CTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ----C--------CcC-----------CCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcC
Confidence 0 000 0012345566666665532 22233569999999988999999999999999
Q ss_pred EEEEecCCCchhh
Q 005770 235 LLIGADGIWSKVR 247 (678)
Q Consensus 235 ~vVgADG~~S~VR 247 (678)
+||.|+|..+...
T Consensus 103 ~vviAtG~~~~~~ 115 (297)
T 3fbs_A 103 RLILAMGVTDELP 115 (297)
T ss_dssp EEEECCCCEEECC
T ss_pred EEEECCCCCCCCC
Confidence 9999999976543
No 104
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.86 E-value=1.6e-08 Score=94.56 Aligned_cols=80 Identities=23% Similarity=0.346 Sum_probs=65.9
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEeC-----CEEEEEeCCCCCceEecCCCCceeecCCCCcEEeCCCC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----GAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSD 641 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~-----~~~~i~Dl~S~nGt~v~~~~~~~~~~~~~~~~~l~~gd 641 (678)
...++|||..... .+||+|..+.|+++||.|..++ +.++|.++ +.+.|||||. +|. +++.|++||
T Consensus 90 ~g~t~VGr~~~~~--~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t~VNG~-----~I~--~~~~L~~GD 159 (184)
T 4egx_A 90 DGITRVGREDGER--RQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADTYVNGK-----KVT--EPSILRSGN 159 (184)
T ss_dssp SEEEEEECSSSSS--CCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCEEETTE-----ECC--SCEECCTTC
T ss_pred CCcCcCCCCCcCC--CCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeEEEcCE-----Ecc--ccEEcCCCC
Confidence 4468999975422 2899999999999999999863 45888886 6788999999 775 689999999
Q ss_pred EEEECCCceEEEEEEec
Q 005770 642 TIEFGSDKKAIFRVKVI 658 (678)
Q Consensus 642 ~i~~g~~~~~~~~~~~~ 658 (678)
+|.||+.. .|+|..|
T Consensus 160 rI~lG~~h--~Frfn~P 174 (184)
T 4egx_A 160 RIIMGKSH--VFRFNHP 174 (184)
T ss_dssp EEEETTTE--EEEEECH
T ss_pred EEEECCCC--EEEECCh
Confidence 99999975 4888766
No 105
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.84 E-value=2.9e-07 Score=101.52 Aligned_cols=59 Identities=20% Similarity=0.267 Sum_probs=39.8
Q ss_pred HHHHHHHhc--CCceEEeCCeEEEEEEeCCeEE-EEEcCCcEEeccEEEEecCCCchhhhhh
Q 005770 192 LQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 192 l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~-v~~~dg~~i~a~~vVgADG~~S~VR~~l 250 (678)
|-+.|.+.+ .+..|+++++|++|..++++++ |+++||+++.||.||.+-+.....++.+
T Consensus 223 l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 223 LVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------
T ss_pred hHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhc
Confidence 334444443 2346999999999999999887 8899999999999998777777776655
No 106
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.84 E-value=5.1e-09 Score=116.81 Aligned_cols=138 Identities=21% Similarity=0.155 Sum_probs=84.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+|||||++|+++|+.|++.|++|+|+|+.+.. | |.|. ....+...
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----G---------------------G~w~----~~~~pg~~ 64 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV----G---------------------GVWY----WNRYPGAR 64 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHH----HCCCTTCB
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Cccc----ccCCCcee
Confidence 34689999999999999999999999999999997432 1 1110 00000000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc---C-CceEEeCCeEEEEEEeCC--eEEEEEcCC
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---G-DEIILNESNVIDFKDHGD--KVSVVLENG 228 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~-~~~i~~~~~v~~~~~~~~--~v~v~~~dg 228 (678)
. +.........+... .......+ .....+.++.+.|...+ + ...++++++|++++.+++ .++|++++|
T Consensus 65 ~----d~~~~~~~~~f~~~-~~~~~~~~-~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G 138 (542)
T 1w4x_A 65 C----DIESIEYCYSFSEE-VLQEWNWT-ERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG 138 (542)
T ss_dssp C----SSCTTTSSCCSCHH-HHHHCCCC-BSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC
T ss_pred e----cccccccccccChh-hhhccCcc-cccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC
Confidence 0 00000000000000 00000000 01345677777765543 2 134889999999987654 689999999
Q ss_pred cEEeccEEEEecCCCchhh
Q 005770 229 QCYAGDLLIGADGIWSKVR 247 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~VR 247 (678)
++++||+||.|+|..|.-+
T Consensus 139 ~~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 139 DRIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp CEEEEEEEEECCCSCCCCC
T ss_pred CEEEeCEEEECcCCCCCCC
Confidence 9999999999999987544
No 107
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.81 E-value=7.8e-09 Score=114.92 Aligned_cols=137 Identities=18% Similarity=0.216 Sum_probs=85.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHH-HcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAK-RKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~-~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
..+||+|||||++|+++|..|+ +.|++|+|+|+++.. | |.|.. . ..+...
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~----G---------------------Gtw~~---~-~ypg~~ 57 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP----G---------------------GTWYW---N-RYPGAL 57 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS----C---------------------THHHH---C-CCTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC----C---------------------Ccccc---c-CCCCce
Confidence 4589999999999999999999 999999999997422 1 11100 0 000000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc---CC-ceEEeCCeEEEEEEeCC--eEEEEEcCC
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~~~~~~~--~v~v~~~dg 228 (678)
.. ... ......+... .......+ .....+.++.+.|.+.+ +. ..++++++|++++.+++ .++|++++|
T Consensus 58 ~d-~~s---~~~~~~~~~~-~~~~~~~~-~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G 131 (540)
T 3gwf_A 58 SD-TES---HLYRFSFDRD-LLQESTWK-TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG 131 (540)
T ss_dssp EE-EEG---GGSSCCSCHH-HHHHCCCS-BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS
T ss_pred ec-CCc---ceeeeccccc-cccCCCCc-ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC
Confidence 00 000 0000000000 00000111 12456777777776654 22 25889999999998766 789999999
Q ss_pred cEEeccEEEEecCCCchhh
Q 005770 229 QCYAGDLLIGADGIWSKVR 247 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~VR 247 (678)
++++||+||.|+|..|.-+
T Consensus 132 ~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 132 EVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp CEEEEEEEEECCCSCCSBC
T ss_pred CEEEeCEEEECCcccccCC
Confidence 9999999999999977544
No 108
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.80 E-value=3.4e-08 Score=85.68 Aligned_cols=95 Identities=9% Similarity=0.198 Sum_probs=72.2
Q ss_pred eEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEe--CCEEEEEeCCCCCceEecC
Q 005770 544 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 621 (678)
Q Consensus 544 ~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~v~~ 621 (678)
+.|....+.. .+|.+. .....++|||++.. .+.|..+||+|+.|..+ ++.+.|.++ ++|+|+|||
T Consensus 10 c~L~p~d~~~---~~I~Lp--~~~g~vvIGRgPet-------~ItDkRcSR~qv~L~ad~~~g~V~Vk~l-G~NP~~vng 76 (143)
T 1yj5_C 10 LWLQSPTGGP---PPIFLP--SDGQALVLGRGPLT-------QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTVGV 76 (143)
T ss_dssp EEEECCTTSC---CCEECC--TTTCEEEECSBTTT-------TBCCSSSCSSCEEEEEETTTTEEEEEEC-SSSCCEETT
T ss_pred EEEEecCCCC---CcEEec--cCCCCEEEcCCCcc-------ccccccccceeEEEEEecCCCeEEEEEc-ccCCcEECC
Confidence 4565554432 344441 23568999999973 67899999999999886 678899998 689999999
Q ss_pred CCCceeecCCCCcEEeCCCCEEEECCCceEEEEEEe
Q 005770 622 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 657 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 657 (678)
. +|.++..+.|++||+|.|=..... |+|..
T Consensus 77 ~-----~L~k~~~~~L~~GD~LeLl~g~y~-f~V~f 106 (143)
T 1yj5_C 77 H-----ELKPGLSGSLSLGDVLYLVNGLYP-LTLRW 106 (143)
T ss_dssp E-----ECCTTCEEEECTTCEEESSSSCSE-EEEEE
T ss_pred E-----EecCCCEEEecCCCEEEEecCCce-EEEEe
Confidence 8 999999999999999996553333 55543
No 109
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.79 E-value=5.5e-08 Score=109.44 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=46.3
Q ss_pred HHHHHHHHHhcC--C-ceEEeCCeEEEEEEeCCeE---EEE-EcCCc--EEeccEEEEecCCCchhhhhh
Q 005770 190 MTLQQILAKAVG--D-EIILNESNVIDFKDHGDKV---SVV-LENGQ--CYAGDLLIGADGIWSKVRKNL 250 (678)
Q Consensus 190 ~~l~~~L~~~~~--~-~~i~~~~~v~~~~~~~~~v---~v~-~~dg~--~i~a~~vVgADG~~S~VR~~l 250 (678)
..+...|.+.+. . ..++++++|+++..+++.+ .+. +.+|+ +++|+.||.|+|..|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 467777777652 2 5688899999999877753 232 25676 799999999999999997654
No 110
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.79 E-value=3.5e-08 Score=103.33 Aligned_cols=144 Identities=18% Similarity=0.195 Sum_probs=81.2
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCcEEEEecccccccCCcc----------cc-cc--eeeChhHHHHHHhcChhHH
Q 005770 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQ----------YR-GP--IQIQSNALAALEAIDLDVA 141 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~---~g~~~~~~e~~~~~~~~~g~----------~~-~~--~~l~~~~~~~L~~l~~gl~ 141 (678)
+||+|||||++|+++|+.|++ +|++|+|+||.......... .+ +. +...+.....+. .+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~----~~~ 77 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQ----RFY 77 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTH----HHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHH----HHH
Confidence 589999999999999999999 99999999997532100000 00 00 111221111111 122
Q ss_pred HHHHHhccccccceeeeeecCCCceeeeccCCCcccccCCCeEEEe--CHHHHHHHHHHhcCCceEEeCCeEEEEEEeCC
Q 005770 142 EEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVI--SRMTLQQILAKAVGDEIILNESNVIDFKDHGD 219 (678)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~ 219 (678)
+.+...+.... +.....+. ...+ +.+ .+.. .-..+.+.|.+.++ ..++++++|++++.+++
T Consensus 78 ~~~~~~g~~~~-----~~~~~~~~--~~~~--------~~~-~~~~~~g~~~l~~~l~~~~g-~~i~~~~~V~~i~~~~~ 140 (342)
T 3qj4_A 78 DELLAYGVLRP-----LSSPIEGM--VMKE--------GDC-NFVAPQGISSIIKHYLKESG-AEVYFRHRVTQINLRDD 140 (342)
T ss_dssp HHHHHTTSCEE-----CCSCEETC--CC----------CCE-EEECTTCTTHHHHHHHHHHT-CEEESSCCEEEEEECSS
T ss_pred HHHHhCCCeec-----Cchhhcce--eccC--------Ccc-ceecCCCHHHHHHHHHHhcC-CEEEeCCEEEEEEEcCC
Confidence 22222222100 00000000 0000 000 0110 11234555555554 45899999999999999
Q ss_pred eEEEEEcCCcEEeccEEEEecCC
Q 005770 220 KVSVVLENGQCYAGDLLIGADGI 242 (678)
Q Consensus 220 ~v~v~~~dg~~i~a~~vVgADG~ 242 (678)
+|+|++.+|+++++|.||.|-..
T Consensus 141 ~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 141 KWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp SEEEEESSSCCEEESEEEECSCH
T ss_pred EEEEEECCCCEEEcCEEEECCCH
Confidence 99999999988999999999864
No 111
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=98.79 E-value=9.8e-09 Score=110.76 Aligned_cols=81 Identities=21% Similarity=0.322 Sum_probs=69.7
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcc---------cccceEEEEe--CC---EEEEEeCCCCCceEecCCCCceeecCCC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQV---------SKMHARISYK--DG---AFYLIDLQSEHGTYVTDNEGRRYRVSSN 632 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~v---------Sr~Ha~i~~~--~~---~~~i~Dl~S~nGt~v~~~~~~~~~~~~~ 632 (678)
...++|||..+ ||++++++.| ||+||+|.++ .. .|+|+| .|+|||||||. ++.++
T Consensus 27 ~~~~~iGR~~~-----~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~D-~S~nGt~vn~~-----~~~~~ 95 (419)
T 3i6u_A 27 NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED-HSGNGTFVNTE-----LVGKG 95 (419)
T ss_dssp SSEEEEESSTT-----SSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEEE-CCSSCEEETTE-----ECCTT
T ss_pred CCCEEecCCCc-----cCEEECCcccccccccccccccceEEEEEcCCCCceEEEEEE-CCcCCceECcc-----cccCC
Confidence 67899999988 9999999865 9999999765 22 299999 89999999999 99999
Q ss_pred CcEEeCCCCEEEECCCceEEEEEEec
Q 005770 633 FPARFRPSDTIEFGSDKKAIFRVKVI 658 (678)
Q Consensus 633 ~~~~l~~gd~i~~g~~~~~~~~~~~~ 658 (678)
...+|.+||.+.+|......|.+...
T Consensus 96 ~~~~l~~~d~i~~~~~~~~~~~~~~~ 121 (419)
T 3i6u_A 96 KRRPLNNNSEIALSLSRNKVFVFFDL 121 (419)
T ss_dssp CEEECCTTEEEEESSTTCEEEEEEES
T ss_pred CcccCCCCCEeeeeccccceEEEecc
Confidence 99999999999999976655766544
No 112
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.79 E-value=8.4e-09 Score=107.48 Aligned_cols=121 Identities=17% Similarity=0.204 Sum_probs=79.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
....+||+||||||+|+++|+.|+++|++|+|+|+.+......| |.+. . ..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g---------------------g~~~----~----~~ 69 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG---------------------GQLT----T----TT 69 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT---------------------CGGG----G----SS
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC---------------------cccc----c----ch
Confidence 34568999999999999999999999999999999752111111 1000 0 00
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEc---CC
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLE---NG 228 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~---dg 228 (678)
.. ..+. +.+ ..+.+..+...|.+.+ .+..+++++ |++++.+++.+++++. ++
T Consensus 70 ~~------------~~~~--------~~~--~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~ 126 (338)
T 3itj_A 70 EI------------ENFP--------GFP--DGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDA 126 (338)
T ss_dssp EE------------CCST--------TCT--TCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSS
T ss_pred hh------------cccC--------CCc--ccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCC
Confidence 00 0000 001 1234556666665554 234577777 9999988888988884 66
Q ss_pred cEEeccEEEEecCCCchh
Q 005770 229 QCYAGDLLIGADGIWSKV 246 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~V 246 (678)
.++.+|+||.|+|..+..
T Consensus 127 ~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 127 EPVTTDAIILATGASAKR 144 (338)
T ss_dssp CCEEEEEEEECCCEEECC
T ss_pred cEEEeCEEEECcCCCcCC
Confidence 789999999999996543
No 113
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.78 E-value=3.2e-08 Score=101.92 Aligned_cols=113 Identities=26% Similarity=0.360 Sum_probs=79.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-cEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
+||+||||||+|+++|+.|+++|+ +|+|+|+... .|. . ... . ...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~----gg~----~-~~~--------------------~-----~~~ 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP----GGQ----I-TGS--------------------S-----EIE 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST----TCG----G-GGC--------------------S-----CBC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC----Ccc----c-ccc--------------------c-----ccc
Confidence 699999999999999999999999 9999998521 110 0 000 0 000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEecc
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~ 234 (678)
.+. +.+ ..+++..+.+.|.+.+. +..+++ .+|++++.+++.+++++.+|+++++|
T Consensus 48 ------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~ 104 (311)
T 2q0l_A 48 ------------NYP--------GVK--EVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAK 104 (311)
T ss_dssp ------------CST--------TCC--SCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ------------cCC--------CCc--ccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECC
Confidence 000 000 13456667776666542 234665 78999998888888888889899999
Q ss_pred EEEEecCCCchhh
Q 005770 235 LLIGADGIWSKVR 247 (678)
Q Consensus 235 ~vVgADG~~S~VR 247 (678)
+||.|+|.++.+.
T Consensus 105 ~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 105 SVIIATGGSPKRT 117 (311)
T ss_dssp EEEECCCEEECCC
T ss_pred EEEECCCCCCCCC
Confidence 9999999877654
No 114
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.77 E-value=2.8e-08 Score=102.74 Aligned_cols=111 Identities=21% Similarity=0.296 Sum_probs=75.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+||||||+|+++|+.|+++|++|+|+|+. . .|. +.. . ...
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~---gg~----~~~---------------------~-----~~~ 58 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P---GGQ----LTE---------------------A-----GIV 58 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T---TGG----GGG---------------------C-----CEE
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C---CCe----ecc---------------------c-----ccc
Confidence 3589999999999999999999999999999986 1 110 000 0 000
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEec
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a 233 (678)
. .+. +.+ .+....+...|.+.+. +..+++ .+|++++.+++.+.+++.+|+++.+
T Consensus 59 ~------------~~~--------~~~---~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~ 114 (323)
T 3f8d_A 59 D------------DYL--------GLI---EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKA 114 (323)
T ss_dssp C------------CST--------TST---TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEE
T ss_pred c------------ccC--------CCC---CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEc
Confidence 0 000 000 1234555555555442 234666 8999999888889999999899999
Q ss_pred cEEEEecCCCch
Q 005770 234 DLLIGADGIWSK 245 (678)
Q Consensus 234 ~~vVgADG~~S~ 245 (678)
|.||.|.|....
T Consensus 115 d~lvlAtG~~~~ 126 (323)
T 3f8d_A 115 DSVILGIGVKRR 126 (323)
T ss_dssp EEEEECCCCEEC
T ss_pred CEEEECcCCCCc
Confidence 999999998743
No 115
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.76 E-value=3.9e-08 Score=115.44 Aligned_cols=61 Identities=20% Similarity=0.377 Sum_probs=49.5
Q ss_pred EEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeE-EEEEcCCcEEeccEEEEecCCCchh
Q 005770 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKV 246 (678)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v-~v~~~dg~~i~a~~vVgADG~~S~V 246 (678)
..++...+...|.+.+ .+..++.+++|++++.+++++ .|++.+| +++||.||.|+|.+|..
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~ 209 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAK 209 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHH
Confidence 4668888888888876 234688899999999888876 4667666 79999999999999854
No 116
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.76 E-value=1.6e-08 Score=112.72 Aligned_cols=137 Identities=20% Similarity=0.198 Sum_probs=83.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
...+||+|||||++|+++|+.|++.|++|+|||+++.. | |.|.. . ..+...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----G---------------------Gtw~~---~-~ypg~~ 69 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV----G---------------------GVWYW---N-RYPGAR 69 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHHH---C-CCTTCB
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Ccccc---C-CCCCce
Confidence 34689999999999999999999999999999997421 1 11100 0 000000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc---CC-ceEEeCCeEEEEEEeCC--eEEEEEcCC
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~~~~~~~--~v~v~~~dg 228 (678)
. +.........+... ........ .....+.++...|.+.+ +. ..++++++|++++.+++ .|+|++++|
T Consensus 70 ~----dv~s~~y~~~f~~~-~~~~~~~~-~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G 143 (549)
T 4ap3_A 70 C----DVESIDYSYSFSPE-LEQEWNWS-EKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG 143 (549)
T ss_dssp C----SSCTTTSSCCSCHH-HHHHCCCS-SSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC
T ss_pred e----CCCchhcccccccc-cccCCCCc-cCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC
Confidence 0 00000000000000 00000000 11345677777766544 22 25889999999987766 789999999
Q ss_pred cEEeccEEEEecCCCchh
Q 005770 229 QCYAGDLLIGADGIWSKV 246 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~V 246 (678)
++++||+||.|+|..|.-
T Consensus 144 ~~i~ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 144 DEVSARFLVVAAGPLSNA 161 (549)
T ss_dssp CEEEEEEEEECCCSEEEC
T ss_pred CEEEeCEEEECcCCCCCC
Confidence 999999999999987643
No 117
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.75 E-value=2e-08 Score=104.37 Aligned_cols=116 Identities=22% Similarity=0.217 Sum_probs=81.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.. | |.+... .+...+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------G~~~~~-----~~~~~~ 55 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQL----G---------------------GQLSAL-----YPEKYI 55 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHH-----CTTSEE
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC----C---------------------ceehhc-----CCCceE
Confidence 3579999999999999999999999999999997421 1 222110 011111
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEEeCC-eEEEEEcCCcEEe
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~~~~~~~-~v~v~~~dg~~i~ 232 (678)
. + +. +.+ .+....+...|.+.+.. ..++++++|++++.+++ .+.+++.+|+ +.
T Consensus 56 ~---~---------~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~ 111 (332)
T 3lzw_A 56 Y---D---------VA--------GFP---KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HY 111 (332)
T ss_dssp C---C---------ST--------TCS---SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EE
T ss_pred e---c---------cC--------CCC---CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EE
Confidence 0 0 00 011 13456777777776643 45888999999998876 7889998886 99
Q ss_pred ccEEEEecCCCch
Q 005770 233 GDLLIGADGIWSK 245 (678)
Q Consensus 233 a~~vVgADG~~S~ 245 (678)
+|+||.|.|.+|.
T Consensus 112 ~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 112 SKTVIITAGNGAF 124 (332)
T ss_dssp EEEEEECCTTSCC
T ss_pred eCEEEECCCCCcC
Confidence 9999999999664
No 118
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.75 E-value=3.6e-08 Score=101.37 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=32.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
.|+.+||+||||||+|+++|+.|+|+|++|+|+|+.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~ 38 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN 38 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 578899999999999999999999999999999986
No 119
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.74 E-value=1.8e-07 Score=100.91 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=42.3
Q ss_pred HHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCchh
Q 005770 191 TLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 246 (678)
Q Consensus 191 ~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~V 246 (678)
.+.+.|.+.+. +..++++++|++++.+++++ | ..+|++++||.||.|-|.....
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 45555665552 34699999999999888888 5 5678899999999999987654
No 120
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.74 E-value=2.4e-08 Score=84.79 Aligned_cols=96 Identities=9% Similarity=0.188 Sum_probs=72.4
Q ss_pred eEEEecCCCCCcCcceeeecccCCCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEe--CCEEEEEeCCCCCceEecC
Q 005770 544 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 621 (678)
Q Consensus 544 ~~Ll~~~~~~~~~~~l~~~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~v~~ 621 (678)
..|....+.. .++.+. .....++|||.+.. .+.|..+||+|+.+..+ ++.+.|.++ ++|+|+|||
T Consensus 17 c~L~~~~~~~---~~I~Lp--~~~g~~viGRgp~t-------~I~DkrcSR~qv~L~ad~~~~~v~vk~l-G~NP~~vng 83 (119)
T 1ujx_A 17 LWLQSPTGGP---PPIFLP--SDGQALVLGRGPLT-------QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTVGV 83 (119)
T ss_dssp EEEECCSSSC---CCCCCC--TTSCCEEESBBTTT-------TBCCTTSCTTSEEEEEETTTTEEEEEEC-SSSCCBSSS
T ss_pred EEEEeCCCCC---CcEEec--cCCCCEEEcCCCCc-------ccccccccceeEEEEEecCCCEEEEEEc-ccCCcEECC
Confidence 4565554432 233331 12568999999973 67899999999999886 678999998 689999999
Q ss_pred CCCceeecCCCCcEEeCCCCEEEECCCceEEEEEEec
Q 005770 622 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 658 (678)
Q Consensus 622 ~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 658 (678)
. ++.+++.+.|++||+|.|=..... |+|.-.
T Consensus 84 ~-----~l~k~~~~~L~~GD~l~Ll~g~y~-~~v~f~ 114 (119)
T 1ujx_A 84 Q-----ELKPGLSGSLSLGDVLYLVNGLYP-LTLRWS 114 (119)
T ss_dssp S-----BCCTTCEEEEETTCCCBCBTTBSC-CEEEEC
T ss_pred E-----EecCCCEEEecCCCEEEEecCCeE-EEEEec
Confidence 9 999999999999999986554333 555543
No 121
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.74 E-value=2e-07 Score=98.25 Aligned_cols=37 Identities=35% Similarity=0.653 Sum_probs=33.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 3568999999999999999999999999999999753
No 122
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.73 E-value=1.7e-08 Score=110.36 Aligned_cols=151 Identities=20% Similarity=0.207 Sum_probs=83.2
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCc---EEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccc
Q 005770 78 LRILVAGGGIGGLVFALAAKR---KGFE---VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~---~g~~---~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~ 151 (678)
+||+||||||+|+++|..|++ .|++ |+|||+.+... |. ....... -+..+ |+ ..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G---G~----w~~~~~~--g~~~~--g~---------~~ 62 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG---GQ----WNYTWRT--GLDEN--GE---------PV 62 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC---GG----GSCCSCC--SBCTT--SS---------BC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC---CE----eecCCCC--Ccccc--CC---------CC
Confidence 699999999999999999999 9999 99999974321 10 0000000 00000 00 00
Q ss_pred ccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc---CCc-eEEeCCeEEEEEEeCC--eEEEEE
Q 005770 152 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDE-IILNESNVIDFKDHGD--KVSVVL 225 (678)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~-~i~~~~~v~~~~~~~~--~v~v~~ 225 (678)
...+..............+..+......+......+++..+.+.|.+.+ +.. .++++++|++++.+++ .++|++
T Consensus 63 ~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~ 142 (464)
T 2xve_A 63 HSSMYRYLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTV 142 (464)
T ss_dssp CCCCCTTCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEE
T ss_pred cCccccchhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEE
Confidence 0000000000000000111111000000000012356777877777654 222 2788999999998766 788887
Q ss_pred cC---C--cEEeccEEEEecCCCchhhh
Q 005770 226 EN---G--QCYAGDLLIGADGIWSKVRK 248 (678)
Q Consensus 226 ~d---g--~~i~a~~vVgADG~~S~VR~ 248 (678)
.+ | .++.+|.||.|+|.+|.-+.
T Consensus 143 ~~~~~g~~~~~~~d~VVvAtG~~s~p~~ 170 (464)
T 2xve_A 143 QDHTTDTIYSEEFDYVVCCTGHFSTPYV 170 (464)
T ss_dssp EETTTTEEEEEEESEEEECCCSSSSBCC
T ss_pred EEcCCCceEEEEcCEEEECCCCCCCCcc
Confidence 65 4 57899999999998776543
No 123
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.72 E-value=5.1e-08 Score=106.90 Aligned_cols=54 Identities=11% Similarity=0.062 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
.|.+.|.+.+....|+++++|++|+.++++++|++.+| +++||.||.|-+....
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~ 290 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQV 290 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHH
Confidence 35556666665456899999999999999999999899 8999999999887643
No 124
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.71 E-value=1.2e-08 Score=106.26 Aligned_cols=119 Identities=21% Similarity=0.265 Sum_probs=77.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+|+++|+.|+++|++|+|+|+........+. .+.. ...
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg---~~~~--------------------------~~~ 56 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGG---QLTT--------------------------TTD 56 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTC---GGGG--------------------------CSE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCc---eeee--------------------------ccc
Confidence 34589999999999999999999999999999983111001110 0000 000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCCcEEe
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~ 232 (678)
.. .+. +++ ..+.+..+...|.+.+ ....++.++ |++++.+++.++|++ +|++++
T Consensus 57 ~~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~ 112 (333)
T 1vdc_A 57 VE------------NFP--------GFP--EGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAIL 112 (333)
T ss_dssp EC------------CST--------TCT--TCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEE
T ss_pred cc------------cCC--------CCc--cCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEE
Confidence 00 000 011 1234556666665554 234577675 889988888888887 788999
Q ss_pred ccEEEEecCCCchh
Q 005770 233 GDLLIGADGIWSKV 246 (678)
Q Consensus 233 a~~vVgADG~~S~V 246 (678)
+|+||.|+|.++..
T Consensus 113 ~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 113 ADAVILAIGAVAKR 126 (333)
T ss_dssp EEEEEECCCEEECC
T ss_pred cCEEEECCCCCcCC
Confidence 99999999998754
No 125
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.71 E-value=4.8e-08 Score=101.09 Aligned_cols=113 Identities=19% Similarity=0.324 Sum_probs=74.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. ..... . .
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~---------------------~-----~ 59 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-----AGG---LTAEA---------------------P-----L 59 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-----TTG---GGGGC---------------------S-----C
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-----CCc---ccccc---------------------c-----h
Confidence 346899999999999999999999999999999842 110 00000 0 0
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEEEEEcCCcEEe
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~ 232 (678)
+. .+.. . ..+.+..+...|.+.+. ...+++ .++++++.+++.++|++ +++++.
T Consensus 60 ~~------------~~~~--------~---~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~ 114 (319)
T 3cty_A 60 VE------------NYLG--------F---KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYH 114 (319)
T ss_dssp BC------------CBTT--------B---SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEE
T ss_pred hh------------hcCC--------C---cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEE
Confidence 00 0000 0 01234455555555442 234555 78999998888888777 667899
Q ss_pred ccEEEEecCCCchh
Q 005770 233 GDLLIGADGIWSKV 246 (678)
Q Consensus 233 a~~vVgADG~~S~V 246 (678)
+|+||.|+|.++..
T Consensus 115 ~~~li~AtG~~~~~ 128 (319)
T 3cty_A 115 AKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEEECCCEEECC
T ss_pred eCEEEECCCCCccc
Confidence 99999999987643
No 126
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.69 E-value=2.9e-08 Score=110.48 Aligned_cols=138 Identities=20% Similarity=0.166 Sum_probs=81.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+|||||++|+++|+.|++.|++|+|||+++.. | |.|. ....+...
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~----G---------------------Gtw~----~~~yPg~~ 57 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV----G---------------------GTWY----WNRYPGCR 57 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHH----HCCCTTCB
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Cccc----cCCCCcee
Confidence 34689999999999999999999999999999997432 1 0000 00000000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc---CC-ceEEeCCeEEEEEEeCC--eEEEEEcCC
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~~~~~~~--~v~v~~~dg 228 (678)
. +.........+.... ....... .....+.++...|.+.+ +. ..++++++|++++.+++ .|+|++++|
T Consensus 58 ~----d~~~~~y~~~f~~~~-~~~~~~~-~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G 131 (545)
T 3uox_A 58 L----DTESYAYGYFALKGI-IPEWEWS-ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE 131 (545)
T ss_dssp C----SSCHHHHCHHHHTTS-STTCCCS-BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT
T ss_pred e----cCchhhcccccCccc-ccCCCcc-ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC
Confidence 0 000000000000000 0000000 11235666666665544 22 24889999999987654 789999999
Q ss_pred cEEeccEEEEecCCCchhh
Q 005770 229 QCYAGDLLIGADGIWSKVR 247 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~VR 247 (678)
++++||+||.|+|..|.-+
T Consensus 132 ~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 132 EVVTCRFLISATGPLSASR 150 (545)
T ss_dssp EEEEEEEEEECCCSCBC--
T ss_pred CEEEeCEEEECcCCCCCCc
Confidence 9999999999999876543
No 127
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.68 E-value=1e-07 Score=98.92 Aligned_cols=115 Identities=23% Similarity=0.322 Sum_probs=75.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. .+... . .
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~---------------------~-----~ 51 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-----PGG---QIAWS---------------------E-----E 51 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-----TTG---GGGGC---------------------S-----C
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-----CCc---ccccc---------------------c-----c
Confidence 346899999999999999999999999999999872 110 00000 0 0
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEe--CCe-EEEEEcCCc
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDH--GDK-VSVVLENGQ 229 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~--~~~-v~v~~~dg~ 229 (678)
+. .+. +.+ ..+.+..+.+.|.+.+ .+..++. .+|++++.+ ++. +++++.+|+
T Consensus 52 ~~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~ 108 (325)
T 2q7v_A 52 VE------------NFP--------GFP--EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNG 108 (325)
T ss_dssp BC------------CST--------TCS--SCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSC
T ss_pred cc------------cCC--------CCC--CCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCC
Confidence 00 000 000 0134455666555544 1234555 689999876 444 777788888
Q ss_pred EEeccEEEEecCCCchh
Q 005770 230 CYAGDLLIGADGIWSKV 246 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~V 246 (678)
++++|+||.|+|.++..
T Consensus 109 ~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 109 EYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEEEEEECCCEEECC
T ss_pred EEEeCEEEECcCCCcCC
Confidence 99999999999987643
No 128
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.67 E-value=9.2e-08 Score=104.50 Aligned_cols=140 Identities=16% Similarity=0.185 Sum_probs=80.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC-----CcEEEEecccccccCCcccccceeeChhHHHHHHhcC--------hhHHH
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKG-----FEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAID--------LDVAE 142 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g-----~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~--------~gl~~ 142 (678)
..+||+||||||+|+++|..|+++| ++|+|||+.+......+.......++.. .++.+. ..+.+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~---~~~~l~~~~~p~~~~~~~~ 105 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQIS---FLKDLVSLRNPTSPYSFVN 105 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSC---TTSSSSTTTCTTCTTSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcc---hhhccccccCCCCCCChhH
Confidence 4579999999999999999999999 9999999986432111100000000000 000000 00000
Q ss_pred HHHHhccccccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEEe---
Q 005770 143 EVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDH--- 217 (678)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~~~~~--- 217 (678)
.+.... . ...+. ... .....+..+.+.|...+.. ..++++++|++++.+
T Consensus 106 ~l~~~~----------------~-~~~~~------~~~---~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~ 159 (463)
T 3s5w_A 106 YLHKHD----------------R-LVDFI------NLG---TFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSA 159 (463)
T ss_dssp HHHHTT----------------C-HHHHH------HHC---CSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEET
T ss_pred hhhhcC----------------c-eeecc------ccc---CCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCC
Confidence 000000 0 00000 000 1234677888887766533 358889999999876
Q ss_pred CCe--EEEEEcCCc----EEeccEEEEecCCCc
Q 005770 218 GDK--VSVVLENGQ----CYAGDLLIGADGIWS 244 (678)
Q Consensus 218 ~~~--v~v~~~dg~----~i~a~~vVgADG~~S 244 (678)
++. ++|++.+|+ ++.+|.||.|+|...
T Consensus 160 ~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 160 GQVEALRVISRNADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp TEEEEEEEEEEETTSCEEEEEESEEEECCCCEE
T ss_pred CceEEEEEEEecCCCceEEEEeCEEEECCCCCC
Confidence 333 467777765 899999999999844
No 129
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.67 E-value=3.2e-07 Score=98.88 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=43.7
Q ss_pred HHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEE-EEEcCCcEEeccEEEEecCCCchhh
Q 005770 190 MTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVR 247 (678)
Q Consensus 190 ~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~-v~~~dg~~i~a~~vVgADG~~S~VR 247 (678)
..|.+.|.+.+. +..++.+++|++|+.++++++ |++ +|++++||.||.|-|.....+
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHH
Confidence 345556666552 346899999999999888887 655 578999999999999876643
No 130
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.61 E-value=5.6e-07 Score=99.53 Aligned_cols=38 Identities=34% Similarity=0.545 Sum_probs=34.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
...+||+|||||++||++|+.|+++|++|+|+||.+..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 35689999999999999999999999999999998643
No 131
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.61 E-value=1e-07 Score=105.90 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+||+|||||++||++|+.|++ |.+|+|+||.+.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 45899999999999999999999 999999999864
No 132
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.61 E-value=1.1e-07 Score=97.95 Aligned_cols=112 Identities=20% Similarity=0.307 Sum_probs=75.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
++||+||||||+|+++|+.|+++|++|+|+|+.. .|. . .. .. + +.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-----gG~----~-~~--------~~--~---------------~~ 45 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-----GGQ----I-LD--------TV--D---------------IE 45 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-----TGG----G-GG--------CC--E---------------EC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-----Cce----e-cc--------cc--c---------------cc
Confidence 3799999999999999999999999999998531 110 0 00 00 0 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEeC---CeEEEEEcCCcEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHG---DKVSVVLENGQCY 231 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~---~~v~v~~~dg~~i 231 (678)
. +. ..+ ...+..+...|.+.+. +..++.+++|+.++.+. +.+.+++++|+++
T Consensus 46 ---~---------~~--------~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~ 102 (310)
T 1fl2_A 46 ---N---------YI--------SVP---KTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVL 102 (310)
T ss_dssp ---C---------BT--------TBS---SEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEE
T ss_pred ---c---------cc--------CcC---CCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEE
Confidence 0 00 000 1234455555555442 33578888999997653 3688899899899
Q ss_pred eccEEEEecCCCchh
Q 005770 232 AGDLLIGADGIWSKV 246 (678)
Q Consensus 232 ~a~~vVgADG~~S~V 246 (678)
.+|+||.|+|.++..
T Consensus 103 ~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 103 KARSIIVATGAKWRN 117 (310)
T ss_dssp EEEEEEECCCEEECC
T ss_pred EeCEEEECcCCCcCC
Confidence 999999999987643
No 133
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.60 E-value=7.8e-08 Score=100.26 Aligned_cols=114 Identities=21% Similarity=0.219 Sum_probs=74.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. .+... ..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~--------------------------~~ 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGG---ALMTT--------------------------TD 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSC---GGGSC--------------------------SC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCC---ceecc--------------------------ch
Confidence 456899999999999999999999999999999641 110 00000 00
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEE-EEcCCcEE
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSV-VLENGQCY 231 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v-~~~dg~~i 231 (678)
.. .+. +++ ..+.+..+...|.+.+ .+..+++++ +++++. ++.+++ ++.+|+++
T Consensus 58 ~~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~ 113 (335)
T 2a87_A 58 VE------------NYP--------GFR--NGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTH 113 (335)
T ss_dssp BC------------CST--------TCT--TCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEE
T ss_pred hh------------hcC--------CCC--CCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEE
Confidence 00 000 000 0133455555554443 233466675 888877 556777 78888899
Q ss_pred eccEEEEecCCCchh
Q 005770 232 AGDLLIGADGIWSKV 246 (678)
Q Consensus 232 ~a~~vVgADG~~S~V 246 (678)
.+|+||.|+|.++.+
T Consensus 114 ~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 114 RARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEEECCCEEECC
T ss_pred EeCEEEECCCCCccC
Confidence 999999999987643
No 134
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.60 E-value=1.5e-07 Score=99.41 Aligned_cols=135 Identities=18% Similarity=0.279 Sum_probs=78.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+.+||+|||||++|+++|..|++.|+ +|+|||+.+ . |. . +...... ...... .
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~----Gg---~----------~~~~~~~-------~~~~~~-~ 56 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-V----GH---S----------FKHWPKS-------TRTITP-S 56 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-T----TH---H----------HHTSCTT-------CBCSSC-C
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-C----CC---c----------cccCccc-------ccccCc-c
Confidence 46899999999999999999999999 999999874 1 10 0 0000000 000000 0
Q ss_pred eeeeeecCCCceeeeccCCC----cccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCC
Q 005770 155 INGLVDGISGSWYIKFDTFT----PAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENG 228 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg 228 (678)
+.....+- ..+.... +..... ...+.+..+...|.+.+ .+..++++++|++++.++++++|++.++
T Consensus 57 ---~~~~~~g~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g 128 (369)
T 3d1c_A 57 ---FTSNGFGM--PDMNAISMDTSPAFTFN---EEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE 128 (369)
T ss_dssp ---CCCGGGTC--CCTTCSSTTCCHHHHHC---CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC
T ss_pred ---hhcccCCc--hhhhhcccccccccccc---ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC
Confidence 00000000 0000000 000000 01234556666655443 2345788999999998877888888777
Q ss_pred cEEeccEEEEecCCCch
Q 005770 229 QCYAGDLLIGADGIWSK 245 (678)
Q Consensus 229 ~~i~a~~vVgADG~~S~ 245 (678)
++.+|.||.|.|..+.
T Consensus 129 -~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 129 -TYHADYIFVATGDYNF 144 (369)
T ss_dssp -CEEEEEEEECCCSTTS
T ss_pred -EEEeCEEEECCCCCCc
Confidence 6999999999999763
No 135
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.58 E-value=9.5e-08 Score=98.74 Aligned_cols=113 Identities=17% Similarity=0.244 Sum_probs=74.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. .+... . ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~---------------------~-----~~ 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-----KGG---QLTTT---------------------T-----EV 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-----TTG---GGGGC---------------------S-----BC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-----CCc---eEecc---------------------h-----hh
Confidence 45899999999999999999999999999999641 110 00000 0 00
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCCcEEec
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a 233 (678)
. .+. +++ ..+.+..+...|.+.+ ....++.++ +++++.+++.+++ +.+++++.+
T Consensus 50 ~------------~~~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~ 105 (320)
T 1trb_A 50 E------------NWP--------GDP--NDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTC 105 (320)
T ss_dssp C------------CST--------TCC--SSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEE
T ss_pred h------------hCC--------CCC--CCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEc
Confidence 0 000 000 0123445555554443 233466665 8899887778887 678889999
Q ss_pred cEEEEecCCCchh
Q 005770 234 DLLIGADGIWSKV 246 (678)
Q Consensus 234 ~~vVgADG~~S~V 246 (678)
|+||.|+|.++..
T Consensus 106 ~~lv~AtG~~~~~ 118 (320)
T 1trb_A 106 DALIIATGASARY 118 (320)
T ss_dssp EEEEECCCEEECC
T ss_pred CEEEECCCCCcCC
Confidence 9999999987644
No 136
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.58 E-value=5.1e-07 Score=98.72 Aligned_cols=60 Identities=23% Similarity=0.222 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEE-EEEc-CCcEEeccEEEEecCCCchhhhh
Q 005770 189 RMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLE-NGQCYAGDLLIGADGIWSKVRKN 249 (678)
Q Consensus 189 r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~-v~~~-dg~~i~a~~vVgADG~~S~VR~~ 249 (678)
...+.+.|.+.+ .+..++.+++| ++..+++.+. +.+. ++.++.||.||.|+|..|.++..
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCcc
Confidence 345666666554 23458889999 9987777653 3333 22357899999999999988764
No 137
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.54 E-value=1.1e-06 Score=98.69 Aligned_cols=57 Identities=18% Similarity=0.188 Sum_probs=42.5
Q ss_pred HHHHHHHHHhcC--CceEEeCCeEEEEEEeCCeEE-EEE---cCCc--EEeccEEEEecCCCchh
Q 005770 190 MTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVL---ENGQ--CYAGDLLIGADGIWSKV 246 (678)
Q Consensus 190 ~~l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~v~-v~~---~dg~--~i~a~~vVgADG~~S~V 246 (678)
..+...|.+.+. +..++.++.|+++..+++.+. |.. .+|+ .++|+.||.|+|..|.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 456777777653 346889999999987766543 333 4665 68999999999999875
No 138
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.51 E-value=1.6e-06 Score=97.18 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=33.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
..+||+|||||++|+++|+.|+++|.+|+|+||.+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3589999999999999999999999999999998643
No 139
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.51 E-value=3.4e-07 Score=99.99 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=78.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeCh---hHHHHHHhcChhHHHHHHHhcccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQS---NALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~---~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
.+||+||||||+|+++|+.|+++|++|+|+|+... | +..++. .+..++... ++++.+..... ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~-----g----G~~~~~g~~psk~ll~~~--~~~~~~~~~~~--~~ 69 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW-----G----GVCLNVGCIPSKALLRNA--ELVHIFTKDAK--AF 69 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCT-----T----HHHHHHSHHHHHHHHHHH--HHHHHHHHHTT--TT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC-----C----CcccccCchhhHHHHHHH--HHHHHHHHHHH--hc
Confidence 58999999999999999999999999999998721 1 111111 123344433 45555431111 01
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCC--c
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENG--Q 229 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg--~ 229 (678)
.+ ... ....+.... ... ... ...+.+.|.+.+ .+..++.++.+. .+++.+++++.+| +
T Consensus 70 g~---~~~----~~~~~~~~~--~~~----~~~--~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~ 131 (464)
T 2a8x_A 70 GI---SGE----VTFDYGIAY--DRS----RKV--AEGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTE 131 (464)
T ss_dssp TE---EEC----CEECHHHHH--HHH----HHH--HHHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCE
T ss_pred CC---CCC----CccCHHHHH--HHH----HHH--HHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceE
Confidence 11 000 001111000 000 000 012333333322 234466665443 3567788888888 6
Q ss_pred EEeccEEEEecCCCchhhh
Q 005770 230 CYAGDLLIGADGIWSKVRK 248 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~VR~ 248 (678)
++++|+||.|+|.++.+..
T Consensus 132 ~~~~d~lViAtG~~~~~~~ 150 (464)
T 2a8x_A 132 SVTFDNAIIATGSSTRLVP 150 (464)
T ss_dssp EEEEEEEEECCCEEECCCT
T ss_pred EEEcCEEEECCCCCCCCCC
Confidence 8999999999999875543
No 140
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.49 E-value=5.3e-07 Score=92.74 Aligned_cols=117 Identities=16% Similarity=0.149 Sum_probs=72.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+||+||||||||+++|+.|+++|++|+|+|+....... +. |. + .....+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~---------~~------------G~---~-----~~~~~i 53 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVA---------AG------------GQ---L-----TTTTII 53 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCC---------TT------------CG---G-----GGSSEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcc---------cC------------CC---c-----CChHHh
Confidence 3589999999999999999999999999999986421100 00 00 0 000000
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeEEEEEcCCcEEec
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a 233 (678)
. .+. +.+. .+...+|...+.+.+ ....+ ...++.......+...+...++.++.+
T Consensus 54 ~------------~~~--------g~~~--~i~~~~l~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ 110 (314)
T 4a5l_A 54 E------------NFP--------GFPN--GIDGNELMMNMRTQSEKYGTTI-ITETIDHVDFSTQPFKLFTEEGKEVLT 110 (314)
T ss_dssp C------------CST--------TCTT--CEEHHHHHHHHHHHHHHTTCEE-ECCCEEEEECSSSSEEEEETTCCEEEE
T ss_pred h------------hcc--------CCcc--cCCHHHHHHHHHHHHhhcCcEE-EEeEEEEeecCCCceEEEECCCeEEEE
Confidence 0 000 0110 122344444444333 12223 355677777777777788888899999
Q ss_pred cEEEEecCCCc
Q 005770 234 DLLIGADGIWS 244 (678)
Q Consensus 234 ~~vVgADG~~S 244 (678)
|.||.|.|+..
T Consensus 111 ~~liiATG~~~ 121 (314)
T 4a5l_A 111 KSVIIATGATA 121 (314)
T ss_dssp EEEEECCCEEE
T ss_pred eEEEEcccccc
Confidence 99999999753
No 141
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.48 E-value=2.2e-06 Score=95.96 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=45.9
Q ss_pred EeCHHHHHHHHHHhc--CCceEEeCCeEEEEEEeCCeE-EEEEc---CCc--EEeccEEEEecCCCc-hhhhhh
Q 005770 186 VISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKV-SVVLE---NGQ--CYAGDLLIGADGIWS-KVRKNL 250 (678)
Q Consensus 186 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~~~~~~~~v-~v~~~---dg~--~i~a~~vVgADG~~S-~VR~~l 250 (678)
.++...+...|.+.+ .+..++.+++|+++..+++.+ .|++. +|+ +++||.||.|.|.+| .+++.+
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~ 257 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLN 257 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTC
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhh
Confidence 356666666666654 234688899999999887764 35543 343 799999999999998 455543
No 142
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.48 E-value=3.7e-07 Score=100.10 Aligned_cols=35 Identities=34% Similarity=0.537 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+||+||||||+|+++|+.|+++|++|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35899999999999999999999999999999863
No 143
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.47 E-value=5.1e-07 Score=100.01 Aligned_cols=113 Identities=19% Similarity=0.327 Sum_probs=77.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
+..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. . .. .. +
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-----GG~----~-~~--------~~--~--------------- 254 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-----GGQ----V-LD--------TV--D--------------- 254 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-----TGG----G-TT--------CS--C---------------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-----CCc----c-cc--------cc--c---------------
Confidence 446899999999999999999999999999998631 110 0 00 00 0
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcC--CceEEeCCeEEEEEEe---CCeEEEEEcCCc
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH---GDKVSVVLENGQ 229 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~~~~~---~~~v~v~~~dg~ 229 (678)
+..+. . .+ ......+...|.+.+. +..++.+++|+++..+ ++.++|++++|+
T Consensus 255 ~~~~~---------~-----------~~---~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~ 311 (521)
T 1hyu_A 255 IENYI---------S-----------VP---KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGA 311 (521)
T ss_dssp BCCBT---------T-----------BS---SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSC
T ss_pred ccccC---------C-----------CC---CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCC
Confidence 00000 0 00 1234556666655542 3457888999999754 236889999999
Q ss_pred EEeccEEEEecCCCch
Q 005770 230 CYAGDLLIGADGIWSK 245 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~ 245 (678)
++++|+||.|+|+++.
T Consensus 312 ~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 312 VLKARSIIIATGAKWR 327 (521)
T ss_dssp EEEEEEEEECCCEEEC
T ss_pred EEEcCEEEECCCCCcC
Confidence 9999999999998754
No 144
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.42 E-value=2.2e-06 Score=97.08 Aligned_cols=37 Identities=32% Similarity=0.476 Sum_probs=33.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
..+||+|||||++||++|+.|+++|.+|+|+||....
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 4589999999999999999999999999999997643
No 145
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.41 E-value=7.7e-07 Score=97.51 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=41.0
Q ss_pred HHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEE---cCCcEEeccEEEEecCCCch
Q 005770 192 LQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL---ENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 192 l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~---~dg~~i~a~~vVgADG~~S~ 245 (678)
|.+.|.+.++. .++++++|++|+.+++++.|++ .+|++++||.||.|-+....
T Consensus 240 l~~~l~~~lg~-~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 240 LIDALAASLGD-AAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp HHHHHHHHHGG-GEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHhhh-hEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 55555655543 4889999999998888888888 67888999999999988753
No 146
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.39 E-value=8.1e-07 Score=97.54 Aligned_cols=45 Identities=27% Similarity=0.299 Sum_probs=38.9
Q ss_pred CceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCchh
Q 005770 202 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 246 (678)
Q Consensus 202 ~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~V 246 (678)
+..++.+++|++++.+++++.+++.+|+++.+|.||.|.|..+..
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 345888999999998888899999999999999999999976543
No 147
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.39 E-value=1.6e-07 Score=98.55 Aligned_cols=34 Identities=26% Similarity=0.569 Sum_probs=31.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC------CcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKG------FEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g------~~~~~~e~~~~ 111 (678)
+||+|||||++|+++|+.|+++| ++|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 99999999864
No 148
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.36 E-value=1.1e-06 Score=96.36 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+||+||||||+|+++|+.|++.|++|+|+|+.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 35899999999999999999999999999999864
No 149
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.36 E-value=2.8e-07 Score=99.57 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=36.7
Q ss_pred eEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCC
Q 005770 204 IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 243 (678)
Q Consensus 204 ~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~ 243 (678)
.++.+++|++|+.++++++|++.+|++++||.||.|-|..
T Consensus 219 ~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 219 EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 5899999999999888999999999889999999999954
No 150
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=1.9e-06 Score=94.23 Aligned_cols=36 Identities=33% Similarity=0.572 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+..+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~ 39 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 39 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 346899999999999999999999999999999974
No 151
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.33 E-value=4e-07 Score=89.17 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=56.4
Q ss_pred CCcEEeCCCCCCCCCcceEEeCCCcccccceEEEEe--C--CEEEEEeCCCCCce-EecCCCCceeecCCCCcEEeC-CC
Q 005770 567 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--D--GAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFR-PS 640 (678)
Q Consensus 567 ~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~--~~~~i~Dl~S~nGt-~v~~~~~~~~~~~~~~~~~l~-~g 640 (678)
+..++|||.+. +||++.+. + |+.+.++ + +.|+|+|++|+||| ||||. ++. +...|+ .|
T Consensus 91 ~~~itIG~~~~-----~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~-----~i~--~~~~L~~~G 154 (238)
T 1wv3_A 91 QDTMTIGPNAY-----DDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYE-----LQE--QLTNKAYIG 154 (238)
T ss_dssp CSEEEEESSTT-----SSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTE-----ECC--SSEEEEETT
T ss_pred CceEEEeCCCC-----CeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCE-----Eec--cceeccCCc
Confidence 34899999888 99999988 3 6877777 3 58999999999996 99998 775 456899 99
Q ss_pred CEEEECCCc
Q 005770 641 DTIEFGSDK 649 (678)
Q Consensus 641 d~i~~g~~~ 649 (678)
|.|.+|+..
T Consensus 155 D~I~ig~~~ 163 (238)
T 1wv3_A 155 DHIYVEGIW 163 (238)
T ss_dssp CEEEETTEE
T ss_pred CEEEECCEE
Confidence 999999863
No 152
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.30 E-value=5.2e-06 Score=91.95 Aligned_cols=53 Identities=21% Similarity=0.176 Sum_probs=43.1
Q ss_pred HHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 192 LQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 192 l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
|-+.|.+.++. .++++++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 217 l~~~l~~~lg~-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 217 VSERIMDLLGD-RVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHGG-GEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHcCC-cEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 44444554443 488999999999888889999999999999999999998763
No 153
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.29 E-value=4.1e-06 Score=96.46 Aligned_cols=42 Identities=21% Similarity=0.176 Sum_probs=37.2
Q ss_pred CceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCC
Q 005770 202 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 243 (678)
Q Consensus 202 ~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~ 243 (678)
...|+++++|++|+.++++|+|++.+|++++||.||.|-...
T Consensus 543 gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 543 GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp TSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred CCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 335899999999999999999999999999999999998653
No 154
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.25 E-value=2.3e-06 Score=93.81 Aligned_cols=130 Identities=14% Similarity=0.152 Sum_probs=69.6
Q ss_pred ccccccCCCCCCCC-CCCCCCeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccccccCCcccccceeeChhHHHHHHh
Q 005770 59 MKAAVAESPTNNSD-SENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEA 135 (678)
Q Consensus 59 ~~~~~~~~~~~~~~-~~~~~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~ 135 (678)
+|+....+...... .....+||+||||||+|+++|..|++. |.+|+|+|+.+.... ...
T Consensus 17 ~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-----------~~~------- 78 (480)
T 3cgb_A 17 GGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY-----------AQC------- 78 (480)
T ss_dssp --------------------CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB-----------CGG-------
T ss_pred chhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC-----------CCC-------
Confidence 77766665332111 111236999999999999999999997 999999998743210 000
Q ss_pred cChhHHHHHHHhccccccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEE
Q 005770 136 IDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFK 215 (678)
Q Consensus 136 l~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~ 215 (678)
++...+ .+... + .. .. +.+ ..+.+.+.. +..++.+++|+.++
T Consensus 79 ---~~~~~~--~~~~~--------~---------~~-----~l--------~~~--~~~~~~~~~-gv~~~~~~~v~~i~ 120 (480)
T 3cgb_A 79 ---GLPYVI--SGAIA--------S---------TE-----KL--------IAR--NVKTFRDKY-GIDAKVRHEVTKVD 120 (480)
T ss_dssp ---GHHHHH--TTSSS--------C---------GG-----GG--------BSS--CHHHHHHTT-CCEEESSEEEEEEE
T ss_pred ---Ccchhh--cCCcC--------C---------HH-----Hh--------hhc--CHHHHHhhc-CCEEEeCCEEEEEE
Confidence 111000 00000 0 00 00 000 012222322 34577889999998
Q ss_pred EeCCeEEEEE-cCCc--EEeccEEEEecCCCc
Q 005770 216 DHGDKVSVVL-ENGQ--CYAGDLLIGADGIWS 244 (678)
Q Consensus 216 ~~~~~v~v~~-~dg~--~i~a~~vVgADG~~S 244 (678)
.+++.+++.. .+|+ ++.+|.||.|+|...
T Consensus 121 ~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 121 TEKKIVYAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp TTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred CCCCEEEEEEcCCCceEEEEcCEEEECCCCcc
Confidence 8778787765 4576 799999999999654
No 155
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.25 E-value=3.1e-06 Score=95.28 Aligned_cols=132 Identities=17% Similarity=0.201 Sum_probs=72.1
Q ss_pred ccccccccCCCCCC-CCCCCCCCeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccccccCCcccccceeeChhHHHHH
Q 005770 57 TQMKAAVAESPTNN-SDSENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAAL 133 (678)
Q Consensus 57 ~~~~~~~~~~~~~~-~~~~~~~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L 133 (678)
+..||....+.... ..+.+..++|+|||||++|+++|..|+++ |++|+|+|+.+... ..+.
T Consensus 15 ~~~np~~g~e~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-----------~~~~----- 78 (588)
T 3ics_A 15 MTGGQQMGRTLYDDDDKDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-----------FANC----- 78 (588)
T ss_dssp -------------------CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-----------BCGG-----
T ss_pred cccchhcCccccCcccCCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-----------ccCC-----
Confidence 34777777654432 23445668999999999999999999999 89999999975321 1110
Q ss_pred HhcChhHHHHHHHhccccccceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEE
Q 005770 134 EAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVID 213 (678)
Q Consensus 134 ~~l~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~ 213 (678)
++...+ .+... . . ... .. ..++. +.+..+ ..++++++|++
T Consensus 79 -----~lp~~~--~g~~~--------~---------~-----~~~-------~~--~~~~~-~~~~~g-i~v~~~~~V~~ 118 (588)
T 3ics_A 79 -----GLPYYI--GGVIT--------E---------R-----QKL-------LV--QTVER-MSKRFN-LDIRVLSEVVK 118 (588)
T ss_dssp -----GHHHHH--TTSSC--------C---------G-----GGG-------BS--SCHHH-HHHHTT-CEEECSEEEEE
T ss_pred -----CCchhh--cCcCC--------C---------h-----HHh-------hc--cCHHH-HHHhcC-cEEEECCEEEE
Confidence 111111 00000 0 0 000 00 00111 222223 34778999999
Q ss_pred EEEeCCeEEEEE-cCCc--EEeccEEEEecCCCc
Q 005770 214 FKDHGDKVSVVL-ENGQ--CYAGDLLIGADGIWS 244 (678)
Q Consensus 214 ~~~~~~~v~v~~-~dg~--~i~a~~vVgADG~~S 244 (678)
++.++..+.+.. .+|+ ++.+|.||.|.|...
T Consensus 119 id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 119 INKEEKTITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp EETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EECCCCEEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 998888887765 4565 789999999999743
No 156
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.22 E-value=8.3e-06 Score=92.50 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHH---H-cCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAK---R-KGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~---~-~g~~~~~~e~~~~ 111 (678)
..+||+|||||++||++|+.|+ + +|.+|+|+||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4589999999999999999999 6 8999999999864
No 157
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.20 E-value=1e-05 Score=91.68 Aligned_cols=36 Identities=28% Similarity=0.449 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc------CCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~------g~~~~~~e~~~~ 111 (678)
..+||||||||+|||++|+.|+++ |.+|+|+||...
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 358999999999999999999998 999999999754
No 158
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.20 E-value=4e-06 Score=86.03 Aligned_cols=110 Identities=25% Similarity=0.350 Sum_probs=70.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEE-EecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~-~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
..+||+||||||+|+++|..|+++|++|+| +|+.. . .|. + .. .. .
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~---gG~----~-~~--------------------~~-----~ 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-P---GGQ----I-TS--------------------SS-----E 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-T---TGG----G-GG--------------------CS-----C
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-C---Cce----e-ee--------------------ec-----e
Confidence 457999999999999999999999999999 99842 1 110 0 00 00 0
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEEeC--CeEEEEEcCCcE
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--DKVSVVLENGQC 230 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~~~~~~--~~v~v~~~dg~~ 230 (678)
+. .+. +.+ ..+....+...|.+.+.. ..++.+ +|+++ .++ +.+.+++..+.+
T Consensus 49 ~~------------~~~--------~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~ 104 (315)
T 3r9u_A 49 IE------------NYP--------GVA--QVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKT 104 (315)
T ss_dssp BC------------CST--------TCC--SCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCE
T ss_pred ec------------cCC--------CCC--CCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCE
Confidence 00 000 000 123455666666665532 346666 89999 666 678754443338
Q ss_pred EeccEEEEecCCC
Q 005770 231 YAGDLLIGADGIW 243 (678)
Q Consensus 231 i~a~~vVgADG~~ 243 (678)
+.+|.||.|.|..
T Consensus 105 ~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 105 ELAKAVIVCTGSA 117 (315)
T ss_dssp EEEEEEEECCCEE
T ss_pred EEeCEEEEeeCCC
Confidence 9999999999974
No 159
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.17 E-value=3.1e-06 Score=91.38 Aligned_cols=112 Identities=15% Similarity=0.264 Sum_probs=69.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
+.+||+|||||++|+++|..|+++|+ +|+|+|+.+..... .+ .+. ....
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~----------~~-----------~l~-----~~~~--- 53 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH----------LP-----------PLS-----KAYL--- 53 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC----------SG-----------GGG-----TTTT---
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc----------CC-----------CCc-----HHHh---
Confidence 35899999999999999999999999 79999987421100 00 000 0000
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEec
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a 233 (678)
. +. .... .. .+. +.+.+. . .+..++.+++|+.++.++. +|++++|+++.+
T Consensus 54 ------~---~~--~~~~------~~------~~~---~~~~~~-~-~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~ 103 (431)
T 1q1r_A 54 ------A---GK--ATAE------SL------YLR---TPDAYA-A-QNIQLLGGTQVTAINRDRQ--QVILSDGRALDY 103 (431)
T ss_dssp ------T---TC--SCSG------GG------BSS---CHHHHH-H-TTEEEECSCCEEEEETTTT--EEEETTSCEEEC
T ss_pred ------C---CC--CChH------Hh------ccc---CHHHHH-h-CCCEEEeCCEEEEEECCCC--EEEECCCCEEEC
Confidence 0 00 0000 00 000 012222 2 2345778999999986554 566788889999
Q ss_pred cEEEEecCCCchh
Q 005770 234 DLLIGADGIWSKV 246 (678)
Q Consensus 234 ~~vVgADG~~S~V 246 (678)
|.||.|+|.++.+
T Consensus 104 d~lviAtG~~p~~ 116 (431)
T 1q1r_A 104 DRLVLATGGRPRP 116 (431)
T ss_dssp SEEEECCCEEECC
T ss_pred CEEEEcCCCCccC
Confidence 9999999986543
No 160
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.16 E-value=3.5e-06 Score=91.69 Aligned_cols=33 Identities=39% Similarity=0.566 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
.+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 479999999999999999999999999999986
No 161
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.13 E-value=1.4e-05 Score=88.48 Aligned_cols=39 Identities=28% Similarity=0.439 Sum_probs=34.9
Q ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 72 DSENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 72 ~~~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++++..+||+||||||+|+++|+.|++.|++|+|||+.+
T Consensus 27 ~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 27 LPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 334567999999999999999999999999999999864
No 162
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.12 E-value=1e-05 Score=85.93 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=69.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
.++.+|+|||||+||+++|..|++.+.+|+|||+.+.... ..+ .+...+ . +......
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y----------~~~-----------~l~~~l-~-g~~~~~~ 63 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY----------YRP-----------RLNEII-A-KNKSIDD 63 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB----------CGG-----------GHHHHH-H-SCCCGGG
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc----------ccC-----------hhhHHH-c-CCCCHHH
Confidence 4567899999999999999999888999999999753210 000 111111 0 0000000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEecc
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~ 234 (678)
+ ... ..+.+. .. +..++.+++|++++.+.. +|++++|+++.+|
T Consensus 64 l------------------------------~~~---~~~~~~-~~-~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd 106 (385)
T 3klj_A 64 I------------------------------LIK---KNDWYE-KN-NIKVITSEFATSIDPNNK--LVTLKSGEKIKYE 106 (385)
T ss_dssp T------------------------------BSS---CHHHHH-HT-TCEEECSCCEEEEETTTT--EEEETTSCEEECS
T ss_pred c------------------------------cCC---CHHHHH-HC-CCEEEeCCEEEEEECCCC--EEEECCCCEEECC
Confidence 0 000 011111 22 345788999999987665 5677899999999
Q ss_pred EEEEecCC
Q 005770 235 LLIGADGI 242 (678)
Q Consensus 235 ~vVgADG~ 242 (678)
.||.|.|.
T Consensus 107 ~lvlAtG~ 114 (385)
T 3klj_A 107 KLIIASGS 114 (385)
T ss_dssp EEEECCCE
T ss_pred EEEEecCC
Confidence 99999996
No 163
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.08 E-value=1.9e-05 Score=86.81 Aligned_cols=38 Identities=34% Similarity=0.505 Sum_probs=31.7
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 73 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 73 ~~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++|+.+||+||||||+|+++|+.|+++|++|+|||+.+
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 34556999999999999999999999999999999863
No 164
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.07 E-value=2.5e-06 Score=87.80 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
.+|||+||||||||+++|+.|++.|++|+|+|+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 4699999999999999999999999999999985
No 165
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.04 E-value=2e-05 Score=86.19 Aligned_cols=35 Identities=34% Similarity=0.547 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+||+||||||+|+++|..|+++|++|+|+|+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45899999999999999999999999999999874
No 166
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.03 E-value=9.7e-06 Score=88.61 Aligned_cols=35 Identities=20% Similarity=0.106 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~ 111 (678)
.+||+|||||++|+++|..|+++ |++|+|||+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 46999999999999999999999 999999999853
No 167
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.02 E-value=1.3e-05 Score=88.11 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC---CcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKG---FEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g---~~~~~~e~~~ 110 (678)
+.+||+||||||+|+++|..|++.| ++|+|||+.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 3589999999999999999999998 9999999874
No 168
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.02 E-value=3e-05 Score=85.27 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=43.9
Q ss_pred EeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEEeC--------CeEEEEEcCC-----cEEeccEEEEecCC
Q 005770 186 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--------DKVSVVLENG-----QCYAGDLLIGADGI 242 (678)
Q Consensus 186 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~~~~~~--------~~v~v~~~dg-----~~i~a~~vVgADG~ 242 (678)
...|.++.+.|...+.. ..++++++|++++..+ +.++|+..++ +++.|+.||.|.|.
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 45788999988776633 2489999999998654 2488888654 36899999999994
No 169
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.01 E-value=2.6e-05 Score=84.74 Aligned_cols=100 Identities=26% Similarity=0.345 Sum_probs=74.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+..... .+..+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~--------------------~~~~~---------------- 210 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT--------------------MDLEV---------------- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc--------------------cCHHH----------------
Confidence 368999999999999999999999999999987422100 00000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+. +..++.+++|++++.+++++.+++.+|+++.+|.|
T Consensus 211 --------------------------------~~~l~~~l~~~--Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~v 256 (455)
T 2yqu_A 211 --------------------------------SRAAERVFKKQ--GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRV 256 (455)
T ss_dssp --------------------------------HHHHHHHHHHH--TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHHC--CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEE
Confidence 01122333321 34588899999999888888888888889999999
Q ss_pred EEecCCCchh
Q 005770 237 IGADGIWSKV 246 (678)
Q Consensus 237 VgADG~~S~V 246 (678)
|.|.|..+..
T Consensus 257 v~A~G~~p~~ 266 (455)
T 2yqu_A 257 LVAVGRRPYT 266 (455)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCC
Confidence 9999987654
No 170
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.99 E-value=2.9e-05 Score=84.59 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+||+||||||+|+++|..|++.|++|+|+|++.
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35899999999999999999999999999999764
No 171
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.99 E-value=3.3e-05 Score=81.92 Aligned_cols=101 Identities=21% Similarity=0.294 Sum_probs=74.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+...... +.+ .+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~--------~~~-----------~~---------------- 189 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL--------LHP-----------AA---------------- 189 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc--------cCH-----------HH----------------
Confidence 5689999999999999999999999999999864211000 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+ .+..++.+++|++++.+++++.+++.+|+++.+|+|
T Consensus 190 --------------------------------~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~v 235 (384)
T 2v3a_A 190 --------------------------------AKAVQAGLEG--LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLV 235 (384)
T ss_dssp --------------------------------HHHHHHHHHT--TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH--cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEE
Confidence 0112222222 234578899999999888888999999999999999
Q ss_pred EEecCCCchh
Q 005770 237 IGADGIWSKV 246 (678)
Q Consensus 237 VgADG~~S~V 246 (678)
|.|.|..+..
T Consensus 236 v~a~G~~p~~ 245 (384)
T 2v3a_A 236 VSAVGLRPRT 245 (384)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCH
Confidence 9999987754
No 172
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.98 E-value=1.3e-05 Score=86.55 Aligned_cols=33 Identities=27% Similarity=0.512 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~---~g~~~~~~e~~~ 110 (678)
.||+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 689999999999999999999 899999999875
No 173
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.98 E-value=1.6e-05 Score=86.34 Aligned_cols=110 Identities=23% Similarity=0.336 Sum_probs=67.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
+||+|||||++|+++|..|+++ |++|+|+|+.+......+ .+.. .+. + ..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~-----------~~~~--~~~-~---~~----------- 54 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG-----------GLSA--YFN-H---TI----------- 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc-----------cchh--hhc-C---CC-----------
Confidence 5999999999999999999999 999999999853211000 0000 000 0 00
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEc-CCcEEecc
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-NGQCYAGD 234 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~-dg~~i~a~ 234 (678)
.. .. .. .......+ .+ . ...++.+++|++++.+...+.++.. +++++.+|
T Consensus 55 ---~~---------~~------~~-----~~~~~~~~----~~-~-gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d 105 (452)
T 3oc4_A 55 ---NE---------LH------EA-----RYITEEEL----RR-Q-KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYD 105 (452)
T ss_dssp -----------------------------CCCCHHHH----HH-T-TEEEECSCEEEEEETTTTEEEEEETTEEEEEECS
T ss_pred ---CC---------HH------Hh-----hcCCHHHH----HH-C-CCEEEECCEEEEEECCCCEEEEEecCceEEEEcC
Confidence 00 00 00 00011122 11 1 2346789999999988888877633 35689999
Q ss_pred EEEEecCCCc
Q 005770 235 LLIGADGIWS 244 (678)
Q Consensus 235 ~vVgADG~~S 244 (678)
.||.|.|...
T Consensus 106 ~lviAtG~~p 115 (452)
T 3oc4_A 106 KLILATGASQ 115 (452)
T ss_dssp EEEECCCCCB
T ss_pred EEEECCCccc
Confidence 9999999853
No 174
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.96 E-value=2.7e-05 Score=84.68 Aligned_cols=33 Identities=42% Similarity=0.612 Sum_probs=31.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 799999999999999999999999999999874
No 175
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.95 E-value=2.1e-05 Score=85.39 Aligned_cols=35 Identities=31% Similarity=0.528 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~ 110 (678)
+.+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 357999999999999999999998 89999999975
No 176
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.93 E-value=2e-05 Score=84.40 Aligned_cols=35 Identities=20% Similarity=0.508 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCc--EEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~--~~~~e~~~ 110 (678)
..+||+|||||++|+++|..|+++|++ |+|+|+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 457999999999999999999999985 99999874
No 177
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.92 E-value=5.1e-06 Score=86.11 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=32.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEecccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 111 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~--~g~~~~~~e~~~~ 111 (678)
...+||+||||||+||++|+.|++ .|++|+|+|+.+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 456899999999999999999985 4999999999754
No 178
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.91 E-value=2.9e-05 Score=84.11 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~ 110 (678)
+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 4899999999999999999998 99999999874
No 179
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.91 E-value=1.7e-05 Score=85.04 Aligned_cols=35 Identities=34% Similarity=0.694 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCc--EEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~--~~~~e~~~ 110 (678)
..+||+|||||++|+++|..|+++|++ |+|+|+.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 458999999999999999999999998 99999975
No 180
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.89 E-value=5.5e-05 Score=82.37 Aligned_cols=100 Identities=25% Similarity=0.306 Sum_probs=73.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 212 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ--------------------GDPET---------------- 212 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------SCHHH----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc--------------------cCHHH----------------
Confidence 368999999999999999999999999999986422100 00000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEc-C--Cc--EE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-N--GQ--CY 231 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~-d--g~--~i 231 (678)
...+.+.|.+ .+..++.+++|++++.+++++.+++. + |+ ++
T Consensus 213 --------------------------------~~~l~~~l~~--~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 258 (464)
T 2eq6_A 213 --------------------------------AALLRRALEK--EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEV 258 (464)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEE
T ss_pred --------------------------------HHHHHHHHHh--cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEE
Confidence 0112233322 23458889999999988888888886 6 76 89
Q ss_pred eccEEEEecCCCchh
Q 005770 232 AGDLLIGADGIWSKV 246 (678)
Q Consensus 232 ~a~~vVgADG~~S~V 246 (678)
.+|+||.|.|..+..
T Consensus 259 ~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 259 VVDKVLVAVGRKPRT 273 (464)
T ss_dssp EESEEEECSCEEESC
T ss_pred EcCEEEECCCcccCC
Confidence 999999999987654
No 181
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.88 E-value=8.9e-05 Score=81.15 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=32.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
+..+||+||||||+|+++|+.|++.|++|+|+|+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 45689999999999999999999999999999964
No 182
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.88 E-value=4.2e-05 Score=83.04 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=31.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~ 110 (678)
+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999975
No 183
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.87 E-value=5.8e-05 Score=80.78 Aligned_cols=34 Identities=26% Similarity=0.582 Sum_probs=31.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCc--EEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~--~~~~e~~~~ 111 (678)
.+|+|||||++|+++|..|+++|++ |+|+|+.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC
Confidence 4899999999999999999999998 999998753
No 184
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.87 E-value=2.8e-05 Score=87.00 Aligned_cols=34 Identities=35% Similarity=0.532 Sum_probs=31.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~ 111 (678)
.+|+||||||+|+++|..|+++ |++|+|+|+.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 4899999999999999999998 899999999853
No 185
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.86 E-value=6.9e-05 Score=82.18 Aligned_cols=35 Identities=37% Similarity=0.500 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.++||+||||||+|+++|+.|++.|++|+|+|+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 46899999999999999999999999999999853
No 186
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.84 E-value=7.3e-05 Score=81.03 Aligned_cols=100 Identities=20% Similarity=0.194 Sum_probs=72.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 210 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP--------------------SFDPMI---------------- 210 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh--------------------hhhHHH----------------
Confidence 46899999999999999999999999999998642110 010000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCe-EEEEEcCCcEEeccE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDL 235 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~-v~v~~~dg~~i~a~~ 235 (678)
...+.+.|.+. +..++.+++|++++.++++ +.+++.+|+++.+|+
T Consensus 211 --------------------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~ 256 (450)
T 1ges_A 211 --------------------------------SETLVEVMNAE--GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDC 256 (450)
T ss_dssp --------------------------------HHHHHHHHHHH--SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred --------------------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCE
Confidence 01122333221 3357889999999876554 788899999999999
Q ss_pred EEEecCCCchh
Q 005770 236 LIGADGIWSKV 246 (678)
Q Consensus 236 vVgADG~~S~V 246 (678)
||.|.|..+.+
T Consensus 257 vv~a~G~~p~~ 267 (450)
T 1ges_A 257 LIWAIGREPAN 267 (450)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999987654
No 187
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.83 E-value=7.1e-05 Score=80.64 Aligned_cols=34 Identities=21% Similarity=0.492 Sum_probs=31.6
Q ss_pred CeEEEECCCHHHHHHHHHHHH--cCCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~--~g~~~~~~e~~~~ 111 (678)
.||+|||||++|+++|..|++ .|++|+|||+++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 589999999999999999999 8999999999753
No 188
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.83 E-value=0.00011 Score=80.03 Aligned_cols=100 Identities=20% Similarity=0.147 Sum_probs=73.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.... .++..+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~--------------------~~~~~~~--------------- 210 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF--------------------QFDPLLS--------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc--------------------ccCHHHH---------------
Confidence 35899999999999999999999999999998642110 0100000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCc-EEeccE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDL 235 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~-~i~a~~ 235 (678)
..+.+.|.+ .+..++.+++|++++.+++++.+++.+|+ ++.+|.
T Consensus 211 ---------------------------------~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~ 255 (463)
T 2r9z_A 211 ---------------------------------ATLAENMHA--QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDS 255 (463)
T ss_dssp ---------------------------------HHHHHHHHH--TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESE
T ss_pred ---------------------------------HHHHHHHHH--CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCE
Confidence 112223322 23458889999999988778889999998 899999
Q ss_pred EEEecCCCchh
Q 005770 236 LIGADGIWSKV 246 (678)
Q Consensus 236 vVgADG~~S~V 246 (678)
||.|.|..+..
T Consensus 256 vv~a~G~~p~~ 266 (463)
T 2r9z_A 256 VIWAVGRAPNT 266 (463)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999976543
No 189
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.82 E-value=7.1e-06 Score=92.69 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=48.5
Q ss_pred cccccccccccc-ccccccccCCCcccccccccccCCCCCCCCCCCCCCeEEEECCCHHHHHHHHHHHHcC--------C
Q 005770 31 CIEFSRYDHCIN-YKFRTGTSGQSKNPTQMKAAVAESPTNNSDSENKKLRILVAGGGIGGLVFALAAKRKG--------F 101 (678)
Q Consensus 31 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ivG~G~~G~~~a~~l~~~g--------~ 101 (678)
.++|++||+ | |.......+...|+ ++-.....+.....+ ....+|+|||||++||++|..|+++| +
T Consensus 14 ~~~i~~ci~--~ac~~~~~~~~~~~~~--v~~~~~~~~~~~~~~-~~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~ 88 (721)
T 3ayj_A 14 EKKIATTVG--EARLSGINYRHPDSAL--VSYPVAAAAPLGRLP-AGNYRIAIVGGGAGGIAALYELGRLAATLPAGSGI 88 (721)
T ss_dssp --CCCCBHH--HHHHHSTTCCCGGGTT--CCHHHHTTSCCBCCC-SSEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEE
T ss_pred hhhhhhhHH--HHhccchhcccchhhh--cccccccccccCCCC-CCCCeEEEECCCHHHHHHHHHHHHcCcccccCCCc
Confidence 488999999 5 55544443333333 321111111111111 23478999999999999999999999 9
Q ss_pred cEEEEeccc
Q 005770 102 EVLVFEKDM 110 (678)
Q Consensus 102 ~~~~~e~~~ 110 (678)
+|+|+|++.
T Consensus 89 ~V~v~E~~~ 97 (721)
T 3ayj_A 89 DVQIYEADP 97 (721)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 999999876
No 190
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.81 E-value=1.2e-05 Score=88.47 Aligned_cols=38 Identities=24% Similarity=0.450 Sum_probs=33.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~ 111 (678)
++..+||+|||||++|+++|..|+++ |.+|+|||+.+.
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 34568999999999999999999887 899999999753
No 191
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.81 E-value=3.1e-05 Score=83.50 Aligned_cols=33 Identities=21% Similarity=0.475 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC--CcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g--~~~~~~e~~~ 110 (678)
.+|+|||||++|+++|..|++.+ ++|+|||+++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 47999999999999999999876 8999999874
No 192
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.80 E-value=0.00015 Score=79.99 Aligned_cols=36 Identities=33% Similarity=0.484 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
.+|||+||||||+|+++|..+++.|.+|+|||+...
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 358999999999999999999999999999998654
No 193
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.80 E-value=0.00012 Score=80.32 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCcEEEEec
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 108 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~-~g~~~~~~e~ 108 (678)
..+||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999999999999 9999999994
No 194
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.80 E-value=1.1e-05 Score=89.08 Aligned_cols=52 Identities=12% Similarity=0.116 Sum_probs=39.0
Q ss_pred HHHHHHHHHhcCC--ceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCC
Q 005770 190 MTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 243 (678)
Q Consensus 190 ~~l~~~L~~~~~~--~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~ 243 (678)
..|-+.|.+.+.. ..++.+++|+++..++.. +++.+|+++.||.||.+--..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHH
Confidence 3466667776643 358899999999877765 457899999999999765443
No 195
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.76 E-value=6.7e-05 Score=82.51 Aligned_cols=34 Identities=35% Similarity=0.431 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~---g~~~~~~e~~~ 110 (678)
.+||+||||||+|+++|..|+++ |++|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999874
No 196
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=0.00011 Score=77.39 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..||+||||||+|+++|..|++.| +|+|+|+.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC
Confidence 469999999999999999999999 999999875
No 197
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.73 E-value=7e-05 Score=79.95 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=31.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
.+|+|||||++|+++|..|+++|+ +|+|+|+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 589999999999999999999999 899999975
No 198
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.72 E-value=0.00014 Score=77.78 Aligned_cols=33 Identities=36% Similarity=0.510 Sum_probs=31.2
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~---~g~~~~~~e~~~ 110 (678)
.+|+|||||++|+++|..|++ .|++|+|+|+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 479999999999999999999 999999999985
No 199
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.71 E-value=2.5e-05 Score=84.76 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=33.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+||+|||||++||++|..|+++|++|+|+|+++.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~ 45 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDH 45 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999853
No 200
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.70 E-value=0.00023 Score=77.31 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=83.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~ 154 (678)
..+|+|||||..|+-+|..|++. |.+|++++|.+............-...+...+.+..+.......+.+.....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~--- 303 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNT--- 303 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGG---
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhcc---
Confidence 56899999999999999999999 9999999997643211100000001344445555555322222222221000
Q ss_pred eeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhc---CCceEEeCCeEEEEEEeCCeEEEEEc---CC
Q 005770 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLE---NG 228 (678)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~~~~~~~~v~v~~~---dg 228 (678)
. +.. ... .+-....+.+..+.+ ....++.+++|++++.+++++.+++. +|
T Consensus 304 ~---~~~------~~~---------------~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g 359 (463)
T 3s5w_A 304 N---YSV------VDT---------------DLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSG 359 (463)
T ss_dssp T---SSC------BCH---------------HHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTC
T ss_pred C---CCc------CCH---------------HHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCC
Confidence 0 000 000 000112222222222 23468899999999999999988887 66
Q ss_pred c--EEeccEEEEecCCCc
Q 005770 229 Q--CYAGDLLIGADGIWS 244 (678)
Q Consensus 229 ~--~i~a~~vVgADG~~S 244 (678)
+ ++.+|+||.|.|...
T Consensus 360 ~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 360 ELSVETYDAVILATGYER 377 (463)
T ss_dssp CEEEEEESEEEECCCEEC
T ss_pred CeEEEECCEEEEeeCCCC
Confidence 5 499999999999753
No 201
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=0.00019 Score=77.90 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=70.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 213 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG--------------------FEKQM---------------- 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999986421100 00000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEc---CCcEEec
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NGQCYAG 233 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~---dg~~i~a 233 (678)
...+.+.|.+ .+..++.+++|++++.+++++.+++. +++++.+
T Consensus 214 --------------------------------~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~ 259 (455)
T 1ebd_A 214 --------------------------------AAIIKKRLKK--KGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDA 259 (455)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred --------------------------------HHHHHHHHHH--CCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEc
Confidence 0112223322 23457889999999888777877775 4568999
Q ss_pred cEEEEecCCCch
Q 005770 234 DLLIGADGIWSK 245 (678)
Q Consensus 234 ~~vVgADG~~S~ 245 (678)
|.||.|.|....
T Consensus 260 D~vv~a~G~~p~ 271 (455)
T 1ebd_A 260 DYVLVTVGRRPN 271 (455)
T ss_dssp SEEEECSCEEES
T ss_pred CEEEECcCCCcc
Confidence 999999997654
No 202
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.69 E-value=5e-05 Score=83.44 Aligned_cols=36 Identities=22% Similarity=0.428 Sum_probs=32.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+.+|||||||++|+.+|..|++.+++|+|||+++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 345689999999999999999999999999999874
No 203
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.68 E-value=3.2e-05 Score=81.24 Aligned_cols=35 Identities=37% Similarity=0.602 Sum_probs=33.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
...+||+|||||++||++|+.|+++|++|+|+|++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 45689999999999999999999999999999987
No 204
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.67 E-value=3.3e-05 Score=82.97 Aligned_cols=52 Identities=10% Similarity=0.061 Sum_probs=40.1
Q ss_pred HHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 192 LQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 192 l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
+-+.|.+.++. .++.+++|++|+.++++++|++.+|+ ++||.||.|-+..-.
T Consensus 208 l~~~l~~~l~~-~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 208 MFEHLNATLEH-PAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHSSS-CCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHhhcc-eEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 33444445543 37789999999988888999888885 899999999988643
No 205
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.63 E-value=2.7e-05 Score=85.24 Aligned_cols=37 Identities=35% Similarity=0.425 Sum_probs=33.3
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 73 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 73 ~~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
+.+..+||+||||||+|+++|+.|+++|++|+|+|+.
T Consensus 16 ~~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 16 GAVASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp -CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 3445799999999999999999999999999999975
No 206
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.58 E-value=0.00026 Score=77.25 Aligned_cols=100 Identities=25% Similarity=0.282 Sum_probs=70.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+..... +.+ .+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~---------------- 226 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS---------MDG-----------EV---------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS---------SCH-----------HH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc---------cCH-----------HH----------------
Confidence 468999999999999999999999999999987432110 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEE--eCCeEEEEEc-----CCc
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKVSVVLE-----NGQ 229 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~--~~~~v~v~~~-----dg~ 229 (678)
...+.+.|.+ .+..++.+++|++++. +++.+.+++. +++
T Consensus 227 --------------------------------~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 272 (478)
T 1v59_A 227 --------------------------------AKATQKFLKK--QGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQE 272 (478)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred --------------------------------HHHHHHHHHH--CCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCce
Confidence 0112222222 2345778899999987 5666777776 346
Q ss_pred EEeccEEEEecCCCchh
Q 005770 230 CYAGDLLIGADGIWSKV 246 (678)
Q Consensus 230 ~i~a~~vVgADG~~S~V 246 (678)
++.+|.||.|.|.....
T Consensus 273 ~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 273 NLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp EEEESEEEECSCEEECC
T ss_pred EEECCEEEECCCCCcCC
Confidence 89999999999976544
No 207
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.58 E-value=3.5e-05 Score=85.15 Aligned_cols=55 Identities=18% Similarity=0.183 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcCCceEEeCCeEEEEEEe-CCeEEEEEcCCcEEeccEEEEecCCCc
Q 005770 190 MTLQQILAKAVGDEIILNESNVIDFKDH-GDKVSVVLENGQCYAGDLLIGADGIWS 244 (678)
Q Consensus 190 ~~l~~~L~~~~~~~~i~~~~~v~~~~~~-~~~v~v~~~dg~~i~a~~vVgADG~~S 244 (678)
..+.+.|.+.+....|+++++|++|..+ +++|.|++.+|++++||.||.|-+...
T Consensus 202 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~ 257 (516)
T 1rsg_A 202 DSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSV 257 (516)
T ss_dssp HHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHH
T ss_pred HHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHH
Confidence 3344445555544458999999999986 677999999999999999999998653
No 208
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.58 E-value=3.3e-05 Score=83.75 Aligned_cols=56 Identities=14% Similarity=-0.006 Sum_probs=42.4
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEEeCCe-EEEEEcCCcEEeccEEEEecCCCchhhhh
Q 005770 191 TLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSKVRKN 249 (678)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~-v~v~~~dg~~i~a~~vVgADG~~S~VR~~ 249 (678)
.|-+.|.+.++. .++++++|++|+.++++ ++|+. +|++++||.||.|-+.. .+.+.
T Consensus 216 ~l~~~l~~~lg~-~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~-~~~~l 272 (453)
T 2yg5_A 216 QVSIRMAEALGD-DVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN-LYSRI 272 (453)
T ss_dssp HHHHHHHHHHGG-GEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG-GGGGS
T ss_pred HHHHHHHHhcCC-cEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH-HHhcC
Confidence 344455555543 48899999999998888 88775 77889999999999987 34443
No 209
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.57 E-value=5.4e-05 Score=83.02 Aligned_cols=53 Identities=17% Similarity=0.227 Sum_probs=43.9
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCC---cEEeccEEEEecCCC
Q 005770 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAGDLLIGADGIW 243 (678)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg---~~i~a~~vVgADG~~ 243 (678)
.|-+.|.+.++...++++++|++|+.++++|+|++.+| ++++||.||.|-...
T Consensus 240 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 46666777766345899999999999999999998876 689999999999765
No 210
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.00034 Score=76.40 Aligned_cols=100 Identities=17% Similarity=0.194 Sum_probs=71.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~~--------------- 229 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR--------------------KFDECIQ--------------- 229 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT--------------------TSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc--------------------ccCHHHH---------------
Confidence 46899999999999999999999999999998743210 0100000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCe--EEEEEcCC-cEEec
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLENG-QCYAG 233 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~--v~v~~~dg-~~i~a 233 (678)
..+.+.|.+. +..++.+++|++++.++++ +.+++++| +++.+
T Consensus 230 ---------------------------------~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~ 274 (479)
T 2hqm_A 230 ---------------------------------NTITDHYVKE--GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDV 274 (479)
T ss_dssp ---------------------------------HHHHHHHHHH--TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEE
T ss_pred ---------------------------------HHHHHHHHhC--CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEc
Confidence 1222333322 3457889999999876555 78888999 78999
Q ss_pred cEEEEecCCCchh
Q 005770 234 DLLIGADGIWSKV 246 (678)
Q Consensus 234 ~~vVgADG~~S~V 246 (678)
|.||.|.|.....
T Consensus 275 D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 275 DELIWTIGRKSHL 287 (479)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCCCcc
Confidence 9999999976554
No 211
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.56 E-value=5.1e-05 Score=80.89 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~-g~~~~~~e~~~ 110 (678)
..+||+|||||++||++|..|+++ |++|+|+|+++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~ 41 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRP 41 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 468999999999999999999999 99999999874
No 212
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.55 E-value=0.00032 Score=76.72 Aligned_cols=100 Identities=22% Similarity=0.211 Sum_probs=72.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+..... ++..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~--------------------~~~~~~--------------- 229 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG--------------------ADRDLV--------------- 229 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT--------------------SCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc--------------------cCHHHH---------------
Confidence 468999999999999999999999999999987422100 000000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcC----CcEEe
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN----GQCYA 232 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~d----g~~i~ 232 (678)
..+.+.|.+ .+..++.+++|++++.+++++.+++.+ |+++.
T Consensus 230 ---------------------------------~~l~~~l~~--~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~ 274 (482)
T 1ojt_A 230 ---------------------------------KVWQKQNEY--RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQR 274 (482)
T ss_dssp ---------------------------------HHHHHHHGG--GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEE
T ss_pred ---------------------------------HHHHHHHHh--cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEE
Confidence 112222222 123478899999999888788888877 77899
Q ss_pred ccEEEEecCCCchh
Q 005770 233 GDLLIGADGIWSKV 246 (678)
Q Consensus 233 a~~vVgADG~~S~V 246 (678)
+|.||.|.|.....
T Consensus 275 ~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 275 YDAVLVAAGRAPNG 288 (482)
T ss_dssp ESCEEECCCEEECG
T ss_pred cCEEEECcCCCcCC
Confidence 99999999986544
No 213
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.55 E-value=4.9e-05 Score=83.05 Aligned_cols=35 Identities=31% Similarity=0.564 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.++||+||||||+|+++|+.|+++|++|+|+|+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46899999999999999999999999999999975
No 214
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.54 E-value=5.9e-05 Score=79.84 Aligned_cols=36 Identities=28% Similarity=0.476 Sum_probs=33.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+||+|||||++|+++|..|+++|++|+|+|+++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~ 62 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRP 62 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccC
Confidence 456899999999999999999999999999999874
No 215
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.54 E-value=4.7e-05 Score=82.92 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+||+||||||+|+++|+.|+++|++|+|+|+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3589999999999999999999999999999984
No 216
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.54 E-value=0.00019 Score=77.43 Aligned_cols=32 Identities=34% Similarity=0.590 Sum_probs=29.4
Q ss_pred eEEEECCCHHHHHHHHHHHHcC--CcEEEEeccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g--~~~~~~e~~~ 110 (678)
+|+||||||+|+++|..|++.| .+|+|||+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 6999999999999999999998 5799999874
No 217
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.52 E-value=0.00054 Score=75.21 Aligned_cols=100 Identities=22% Similarity=0.288 Sum_probs=71.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... ++..+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~d~~~---------------- 219 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK--------------------FDESV---------------- 219 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT--------------------SCHHH----------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc--------------------cchhh----------------
Confidence 468999999999999999999999999999986422110 00000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCC-eEEEEEcCCcE-Eecc
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQC-YAGD 234 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~-~v~v~~~dg~~-i~a~ 234 (678)
...+.+.|.+ .+..++.+++|++++.+++ .+.+++.+|++ +.+|
T Consensus 220 --------------------------------~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D 265 (500)
T 1onf_A 220 --------------------------------INVLENDMKK--NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFD 265 (500)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEES
T ss_pred --------------------------------HHHHHHHHHh--CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECC
Confidence 0112233322 2345788999999987654 47888889987 9999
Q ss_pred EEEEecCCCchh
Q 005770 235 LLIGADGIWSKV 246 (678)
Q Consensus 235 ~vVgADG~~S~V 246 (678)
.||.|-|.....
T Consensus 266 ~vi~a~G~~p~~ 277 (500)
T 1onf_A 266 HVIYCVGRSPDT 277 (500)
T ss_dssp EEEECCCBCCTT
T ss_pred EEEECCCCCcCC
Confidence 999999986554
No 218
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.48 E-value=6.4e-05 Score=82.03 Aligned_cols=53 Identities=19% Similarity=0.126 Sum_probs=39.0
Q ss_pred HHHHHHHhcC--CceEEeCCeEEEEEEeCCe-EEEEEcCCcEEeccEEEEecCCCch
Q 005770 192 LQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 192 l~~~L~~~~~--~~~i~~~~~v~~~~~~~~~-v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
|-+.|.+.+. +..++++++|++|+.++++ +.|++ ++.+++||.||.|-+....
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 4445555442 3469999999999987776 77766 4558999999999877543
No 219
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.48 E-value=0.0005 Score=74.36 Aligned_cols=35 Identities=26% Similarity=0.231 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc
Confidence 45789999999999999999999999999999874
No 220
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.47 E-value=0.00076 Score=72.11 Aligned_cols=100 Identities=20% Similarity=0.189 Sum_probs=71.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+...... +.+ .+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~--------~~~-----------~~---------------- 196 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV--------AGE-----------AL---------------- 196 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh--------cCH-----------HH----------------
Confidence 5689999999999999999999999999999874321000 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeE-EEEEcCCcEEeccE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDL 235 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v-~v~~~dg~~i~a~~ 235 (678)
...+.+.+.+ .+..++.+++|++++.+++.+ .|++.+|+++.||+
T Consensus 197 --------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~ 242 (415)
T 3lxd_A 197 --------------------------------SEFYQAEHRA--HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADI 242 (415)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSE
T ss_pred --------------------------------HHHHHHHHHh--CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 0112222222 234578899999998876665 68889999999999
Q ss_pred EEEecCCCch
Q 005770 236 LIGADGIWSK 245 (678)
Q Consensus 236 vVgADG~~S~ 245 (678)
||.|-|....
T Consensus 243 Vv~a~G~~p~ 252 (415)
T 3lxd_A 243 VIVGIGIVPC 252 (415)
T ss_dssp EEECSCCEES
T ss_pred EEECCCCccC
Confidence 9999997654
No 221
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.46 E-value=0.00097 Score=71.00 Aligned_cols=99 Identities=25% Similarity=0.370 Sum_probs=71.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+...... +.+. +
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~--------~~~~-----------~---------------- 186 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV--------VTPE-----------I---------------- 186 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------SCHH-----------H----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc--------cCHH-----------H----------------
Confidence 4679999999999999999999999999999864221000 0000 0
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeE-EEEEcCCcEEeccE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDL 235 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v-~v~~~dg~~i~a~~ 235 (678)
...+.+.|.+ .+..++.+++|++++.+++.+ .|+++||+++.||.
T Consensus 187 --------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~ 232 (404)
T 3fg2_P 187 --------------------------------SSYFHDRHSG--AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDL 232 (404)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSE
T ss_pred --------------------------------HHHHHHHHHh--CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 0112222222 234578899999998877666 48899999999999
Q ss_pred EEEecCCCc
Q 005770 236 LIGADGIWS 244 (678)
Q Consensus 236 vVgADG~~S 244 (678)
||.|-|...
T Consensus 233 Vv~a~G~~p 241 (404)
T 3fg2_P 233 VVVGVGVIP 241 (404)
T ss_dssp EEECCCEEE
T ss_pred EEECcCCcc
Confidence 999999754
No 222
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.46 E-value=0.0006 Score=75.31 Aligned_cols=99 Identities=14% Similarity=0.183 Sum_probs=72.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccceee
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~~ 157 (678)
.+|+|||||..|+.+|..|++.|.+|+++|+.+..... +.+ .+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---------~~~-----------~~----------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI---------KDN-----------ET----------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC---------CSH-----------HH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc---------ccH-----------HH-----------------
Confidence 68999999999999999999999999999986421100 000 00
Q ss_pred eeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCe----EEEEEcCCc-EEe
Q 005770 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK----VSVVLENGQ-CYA 232 (678)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~----v~v~~~dg~-~i~ 232 (678)
...+.+.|.+ .+..++.+++|++++.++++ +.|++.+|+ ++.
T Consensus 258 -------------------------------~~~l~~~l~~--~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~ 304 (523)
T 1mo9_A 258 -------------------------------RAYVLDRMKE--QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIE 304 (523)
T ss_dssp -------------------------------HHHHHHHHHH--TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEE
T ss_pred -------------------------------HHHHHHHHHh--CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEE
Confidence 0122333322 23458889999999876555 778888887 899
Q ss_pred ccEEEEecCCCchh
Q 005770 233 GDLLIGADGIWSKV 246 (678)
Q Consensus 233 a~~vVgADG~~S~V 246 (678)
||.||.|.|..+..
T Consensus 305 aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 305 TDFVFLGLGEQPRS 318 (523)
T ss_dssp CSCEEECCCCEECC
T ss_pred cCEEEECcCCccCC
Confidence 99999999987654
No 223
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.45 E-value=0.00017 Score=76.69 Aligned_cols=33 Identities=33% Similarity=0.491 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC--CcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g--~~~~~~e~~~ 110 (678)
.+|+|||||++|+++|..|++.| .+|+|||+++
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 57999999999999999999876 5899999874
No 224
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.45 E-value=7.1e-05 Score=81.49 Aligned_cols=36 Identities=33% Similarity=0.483 Sum_probs=33.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
|..+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 346899999999999999999999999999999874
No 225
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.45 E-value=9.1e-05 Score=80.27 Aligned_cols=37 Identities=32% Similarity=0.462 Sum_probs=33.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+||+||||||+|+++|..|++.|++|+|||+.+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 3467999999999999999999999999999999753
No 226
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.45 E-value=0.00061 Score=74.79 Aligned_cols=100 Identities=18% Similarity=0.261 Sum_probs=72.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... +.+ .+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~---------------- 225 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY---------EDA-----------DA---------------- 225 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC---------SSH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---------cCH-----------HH----------------
Confidence 367999999999999999999999999999987422100 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+ .+..++.+++|++++.+++++.+++.+|+++.+|.|
T Consensus 226 --------------------------------~~~l~~~l~~--~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~V 271 (499)
T 1xdi_A 226 --------------------------------ALVLEESFAE--RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHA 271 (499)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH--CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEE
Confidence 0112222222 234588899999998877778888888989999999
Q ss_pred EEecCCCchh
Q 005770 237 IGADGIWSKV 246 (678)
Q Consensus 237 VgADG~~S~V 246 (678)
|.|-|..+..
T Consensus 272 v~a~G~~p~~ 281 (499)
T 1xdi_A 272 LMTIGSVPNT 281 (499)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCcCC
Confidence 9999987543
No 227
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.44 E-value=8.8e-05 Score=78.57 Aligned_cols=35 Identities=29% Similarity=0.523 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+.+||+|||||++|+++|..|+++|++|+|+|+++
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 35799999999999999999999999999999975
No 228
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.44 E-value=5.4e-05 Score=83.08 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+||+||||||+|+++|..|+++|++|+|+|+.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5899999999999999999999999999999863
No 229
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.44 E-value=0.00068 Score=74.28 Aligned_cols=100 Identities=22% Similarity=0.270 Sum_probs=71.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~---g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
..+|+|||||..|+.+|..|++. |.+|+|+++.+.... .++..+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--------------------~~d~~~------------- 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR--------------------GFDETI------------- 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT--------------------TSCHHH-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc--------------------ccCHHH-------------
Confidence 36899999999999999999999 999999998642210 010000
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCC-eEEEEEcCCcEEe
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~-~v~v~~~dg~~i~ 232 (678)
...+.+.|.+ .+..++.+++|++++.+++ .+.+++.+|+++.
T Consensus 238 -----------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 280 (495)
T 2wpf_A 238 -----------------------------------REEVTKQLTA--NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLD 280 (495)
T ss_dssp -----------------------------------HHHHHHHHHH--TTCEEEESCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred -----------------------------------HHHHHHHHHh--CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEE
Confidence 0122233322 2345788999999987654 4788889999999
Q ss_pred ccEEEEecCCCchh
Q 005770 233 GDLLIGADGIWSKV 246 (678)
Q Consensus 233 a~~vVgADG~~S~V 246 (678)
+|.||.|.|.....
T Consensus 281 ~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 281 VDVVMMAIGRIPRT 294 (495)
T ss_dssp ESEEEECSCEEECC
T ss_pred cCEEEECCCCcccc
Confidence 99999999976543
No 230
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.43 E-value=0.0001 Score=80.31 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+||+||||||+|+++|..|+++|++|+|||+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999987
No 231
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.43 E-value=8.3e-05 Score=81.82 Aligned_cols=36 Identities=36% Similarity=0.548 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+||+|||||++||++|+.|+++|++|+|+|+++.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~ 47 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGK 47 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 458999999999999999999999999999999864
No 232
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.43 E-value=0.00068 Score=74.23 Aligned_cols=99 Identities=23% Similarity=0.230 Sum_probs=71.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~---g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~ 153 (678)
..+|+|||||+.|+.+|..|++. |.+|+++|+.+.... .++..+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--------------------~~d~~~------------- 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR--------------------GFDSEL------------- 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST--------------------TSCHHH-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc--------------------ccCHHH-------------
Confidence 46899999999999999999999 999999998742110 000000
Q ss_pred ceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCC-eEEEEEcCCcEEe
Q 005770 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (678)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~-~v~v~~~dg~~i~ 232 (678)
...+.+.|.+ .+..++.+++|++++.+++ .+.+++.+|+++.
T Consensus 234 -----------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 276 (490)
T 1fec_A 234 -----------------------------------RKQLTEQLRA--NGINVRTHENPAKVTKNADGTRHVVFESGAEAD 276 (490)
T ss_dssp -----------------------------------HHHHHHHHHH--TTEEEEETCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred -----------------------------------HHHHHHHHHh--CCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEE
Confidence 0112223322 2345788999999987664 4788889998999
Q ss_pred ccEEEEecCCCch
Q 005770 233 GDLLIGADGIWSK 245 (678)
Q Consensus 233 a~~vVgADG~~S~ 245 (678)
+|.||.|.|....
T Consensus 277 ~D~vv~a~G~~p~ 289 (490)
T 1fec_A 277 YDVVMLAIGRVPR 289 (490)
T ss_dssp ESEEEECSCEEES
T ss_pred cCEEEEccCCCcC
Confidence 9999999997644
No 233
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.43 E-value=0.00012 Score=81.03 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=33.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++..+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3456899999999999999999999999999999974
No 234
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.42 E-value=0.0001 Score=76.53 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=31.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+||+|||||++|+.+|+.|+++|++|+|+|+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 589999999999999999999999999999876
No 235
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.41 E-value=0.00013 Score=80.14 Aligned_cols=55 Identities=7% Similarity=0.031 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCC---ceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 191 TLQQILAKAVGD---EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 191 ~l~~~L~~~~~~---~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
.+-+.|.+.+.. ..++++++|++|+.++++++|++.+|++++||.||.|-|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 344445554422 3489999999999888889999999989999999999997643
No 236
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.41 E-value=8.6e-05 Score=81.20 Aligned_cols=35 Identities=37% Similarity=0.521 Sum_probs=32.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
+..+||+||||||+|+++|..|++.|++|+|||++
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 34689999999999999999999999999999986
No 237
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.41 E-value=0.00079 Score=73.21 Aligned_cols=101 Identities=29% Similarity=0.342 Sum_probs=70.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 217 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP--------------------TLDEDV---------------- 217 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc--------------------cCCHHH----------------
Confidence 46899999999999999999999999999998742110 000000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEc--CC--cEEe
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYA 232 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~--dg--~~i~ 232 (678)
...+.+.|.+. .+..++.+++|++++.+++++.+++. +| +++.
T Consensus 218 --------------------------------~~~l~~~l~~~-~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~ 264 (468)
T 2qae_A 218 --------------------------------TNALVGALAKN-EKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVT 264 (468)
T ss_dssp --------------------------------HHHHHHHHHHH-TCCEEECSCEEEEEEECSSSEEEEEECC---EEEEE
T ss_pred --------------------------------HHHHHHHHhhc-CCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEE
Confidence 11233333111 23457889999999887777777776 67 5899
Q ss_pred ccEEEEecCCCchh
Q 005770 233 GDLLIGADGIWSKV 246 (678)
Q Consensus 233 a~~vVgADG~~S~V 246 (678)
+|.||.|.|..+..
T Consensus 265 ~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 265 CEALLVSVGRRPFT 278 (468)
T ss_dssp ESEEEECSCEEECC
T ss_pred CCEEEECCCcccCC
Confidence 99999999986543
No 238
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.41 E-value=0.0011 Score=71.39 Aligned_cols=100 Identities=24% Similarity=0.343 Sum_probs=70.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+...... +.+ .+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~--------~~~-----------~~---------------- 193 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV--------TAP-----------PV---------------- 193 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch--------hhH-----------HH----------------
Confidence 4689999999999999999999999999999864221000 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEE--eCCeE-EEEEcCCcEEec
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKV-SVVLENGQCYAG 233 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~--~~~~v-~v~~~dg~~i~a 233 (678)
...+.+.|.+. +..++.++++++++. +++.+ .+++.+|+++.+
T Consensus 194 --------------------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~ 239 (431)
T 1q1r_A 194 --------------------------------SAFYEHLHREA--GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPA 239 (431)
T ss_dssp --------------------------------HHHHHHHHHHH--TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEEC
T ss_pred --------------------------------HHHHHHHHHhC--CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEc
Confidence 01122222221 334788899999986 44555 688889999999
Q ss_pred cEEEEecCCCch
Q 005770 234 DLLIGADGIWSK 245 (678)
Q Consensus 234 ~~vVgADG~~S~ 245 (678)
|.||.|.|....
T Consensus 240 D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 240 DLVIAGIGLIPN 251 (431)
T ss_dssp SEEEECCCEEEC
T ss_pred CEEEECCCCCcC
Confidence 999999997654
No 239
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.41 E-value=0.0001 Score=80.26 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+||+||||||+|+++|..|++.|++|+|||+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 4689999999999999999999999999999986
No 240
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.41 E-value=0.001 Score=72.33 Aligned_cols=100 Identities=23% Similarity=0.364 Sum_probs=72.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccccce
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~-g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~ 155 (678)
..+|+|||+|+.|+.+|..|++. |.+|+++++.+...... +.+ .+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~--------~~~-----------~~--------------- 204 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF--------TSK-----------SL--------------- 204 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT--------SCH-----------HH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc--------cCH-----------HH---------------
Confidence 46899999999999999999999 99999999864211000 000 00
Q ss_pred eeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccE
Q 005770 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (678)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~ 235 (678)
...+.+.|.+ .+..++.+++|++++.+++.+++++.+|+++.+|.
T Consensus 205 ---------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~ 249 (472)
T 3iwa_A 205 ---------------------------------SQMLRHDLEK--NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADL 249 (472)
T ss_dssp ---------------------------------HHHHHHHHHH--TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSE
T ss_pred ---------------------------------HHHHHHHHHh--cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCE
Confidence 0112222222 23457889999999887788888899999999999
Q ss_pred EEEecCCCch
Q 005770 236 LIGADGIWSK 245 (678)
Q Consensus 236 vVgADG~~S~ 245 (678)
||.|-|....
T Consensus 250 Vv~a~G~~p~ 259 (472)
T 3iwa_A 250 VILAAGVSPN 259 (472)
T ss_dssp EEECSCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998643
No 241
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.39 E-value=0.00046 Score=73.74 Aligned_cols=100 Identities=20% Similarity=0.327 Sum_probs=71.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+... ++ .++..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-------------~~------~~~~~~---------------- 187 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-------------VR------VLGRRI---------------- 187 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------HH------HHCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------hh------hcCHHH----------------
Confidence 4689999999999999999999999999999864211 00 000000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+ .+..++.+++|++++.++....++++||+++.||+|
T Consensus 188 --------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~V 233 (410)
T 3ef6_A 188 --------------------------------GAWLRGLLTE--LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSA 233 (410)
T ss_dssp --------------------------------HHHHHHHHHH--HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHHHH--CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEE
Confidence 0112222222 134578899999998766555788999999999999
Q ss_pred EEecCCCch
Q 005770 237 IGADGIWSK 245 (678)
Q Consensus 237 VgADG~~S~ 245 (678)
|.|-|....
T Consensus 234 v~a~G~~p~ 242 (410)
T 3ef6_A 234 LICVGAEPA 242 (410)
T ss_dssp EECSCEEEC
T ss_pred EEeeCCeec
Confidence 999998654
No 242
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.39 E-value=0.00091 Score=72.64 Aligned_cols=98 Identities=27% Similarity=0.372 Sum_probs=69.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 214 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN--------------------EDADV---------------- 214 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------SCHHH----------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999987422100 00000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEc-CC--cEEec
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-NG--QCYAG 233 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~-dg--~~i~a 233 (678)
...+.+.|.+. +..++.++++++++.+++++.+++. +| +++.+
T Consensus 215 --------------------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~ 260 (464)
T 2a8x_A 215 --------------------------------SKEIEKQFKKL--GVTILTATKVESIADGGSQVTVTVTKDGVAQELKA 260 (464)
T ss_dssp --------------------------------HHHHHHHHHHH--TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHc--CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEc
Confidence 01122222221 3347889999999877777777776 66 58999
Q ss_pred cEEEEecCCCc
Q 005770 234 DLLIGADGIWS 244 (678)
Q Consensus 234 ~~vVgADG~~S 244 (678)
|.||.|.|...
T Consensus 261 D~vv~a~G~~p 271 (464)
T 2a8x_A 261 EKVLQAIGFAP 271 (464)
T ss_dssp SEEEECSCEEE
T ss_pred CEEEECCCCCc
Confidence 99999999754
No 243
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.39 E-value=0.00013 Score=79.92 Aligned_cols=56 Identities=14% Similarity=0.170 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhcCCceEEeC--CeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCchh
Q 005770 189 RMTLQQILAKAVGDEIILNE--SNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 246 (678)
Q Consensus 189 r~~l~~~L~~~~~~~~i~~~--~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~V 246 (678)
-..|-+.|.+.++...++.+ ++|++|+.++++|+ +.+|+++.||.||.|-......
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~ 272 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLL 272 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHH
Confidence 34566777777765458888 46999998887664 5888899999999988765544
No 244
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.38 E-value=0.00075 Score=73.54 Aligned_cols=100 Identities=19% Similarity=0.192 Sum_probs=69.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+..... .+.+ .+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------~~~~-----------~~---------------- 222 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--------GIDM-----------EI---------------- 222 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--------SCCH-----------HH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--------ccCH-----------HH----------------
Confidence 368999999999999999999999999999987422100 0000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCe-EEEEE-----cCCcE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVL-----ENGQC 230 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~-v~v~~-----~dg~~ 230 (678)
...+.+.|.+ .+..++.+++|++++.++++ +.+++ .++++
T Consensus 223 --------------------------------~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~ 268 (474)
T 1zmd_A 223 --------------------------------SKNFQRILQK--QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEV 268 (474)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEE
T ss_pred --------------------------------HHHHHHHHHH--CCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceE
Confidence 0112233322 23457889999999887766 77765 35678
Q ss_pred EeccEEEEecCCCch
Q 005770 231 YAGDLLIGADGIWSK 245 (678)
Q Consensus 231 i~a~~vVgADG~~S~ 245 (678)
+.+|.||.|.|....
T Consensus 269 i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 269 ITCDVLLVCIGRRPF 283 (474)
T ss_dssp EEESEEEECSCEEEC
T ss_pred EEcCEEEECcCCCcC
Confidence 999999999997654
No 245
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.37 E-value=0.00046 Score=75.12 Aligned_cols=99 Identities=24% Similarity=0.323 Sum_probs=69.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~--------------------~~~~~---------------- 220 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT--------------------MDAEI---------------- 220 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT--------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc--------------------ccHHH----------------
Confidence 468999999999999999999999999999987422100 00000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEc---CC--cEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NG--QCY 231 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~---dg--~~i 231 (678)
...+.+.|.+ .+..++.+++|++++.+++++.+++. +| +++
T Consensus 221 --------------------------------~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~ 266 (470)
T 1dxl_A 221 --------------------------------RKQFQRSLEK--QGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTII 266 (470)
T ss_dssp --------------------------------HHHHHHHHHH--SSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEE
T ss_pred --------------------------------HHHHHHHHHH--cCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEE
Confidence 0112223322 23347888999999877666777765 55 689
Q ss_pred eccEEEEecCCCch
Q 005770 232 AGDLLIGADGIWSK 245 (678)
Q Consensus 232 ~a~~vVgADG~~S~ 245 (678)
.+|.||.|.|....
T Consensus 267 ~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 267 EADVVLVSAGRTPF 280 (470)
T ss_dssp EESEEECCCCEEEC
T ss_pred ECCEEEECCCCCcC
Confidence 99999999997654
No 246
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.37 E-value=0.00012 Score=79.90 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=32.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++||+||||||+|+++|+.|++.|++|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4799999999999999999999999999999974
No 247
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.37 E-value=0.0012 Score=72.13 Aligned_cols=97 Identities=22% Similarity=0.223 Sum_probs=71.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... ++..+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~d~~~---------------- 217 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL--------------------QDEEM---------------- 217 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC--------------------CCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc--------------------CCHHH----------------
Confidence 468999999999999999999999999999987422100 00000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEc--CC--cEEe
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYA 232 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~--dg--~~i~ 232 (678)
...+.+.|.+ . ..++.++++++++.+++++.+++. +| +++.
T Consensus 218 --------------------------------~~~l~~~l~~--~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~ 262 (492)
T 3ic9_A 218 --------------------------------KRYAEKTFNE--E-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTES 262 (492)
T ss_dssp --------------------------------HHHHHHHHHT--T-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEE
T ss_pred --------------------------------HHHHHHHHhh--C-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEE
Confidence 0122333332 2 457889999999988888888885 67 6899
Q ss_pred ccEEEEecCCCc
Q 005770 233 GDLLIGADGIWS 244 (678)
Q Consensus 233 a~~vVgADG~~S 244 (678)
+|.||.|-|...
T Consensus 263 ~D~Vi~a~G~~p 274 (492)
T 3ic9_A 263 FQYVLAATGRKA 274 (492)
T ss_dssp ESEEEECSCCEE
T ss_pred CCEEEEeeCCcc
Confidence 999999999754
No 248
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.36 E-value=0.0001 Score=79.92 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4589999999999999999999999999999986
No 249
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.35 E-value=0.0014 Score=73.00 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 3589999999999999999999999999999874
No 250
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.35 E-value=0.0001 Score=77.53 Aligned_cols=33 Identities=33% Similarity=0.411 Sum_probs=31.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+||+|||||++|+++|..|+++|++|+|+|+++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 34 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 699999999999999999999999999999874
No 251
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.35 E-value=0.00011 Score=82.70 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~ 80 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI 80 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCC
Confidence 468999999999999999999999999999999754
No 252
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.35 E-value=0.00014 Score=79.79 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=41.3
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCc----EEeccEEEEecCCC
Q 005770 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ----CYAGDLLIGADGIW 243 (678)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~----~i~a~~vVgADG~~ 243 (678)
.|-+.|.+.++. .++++++|++|+.++++|.|++.+|+ +++||.||.|-+..
T Consensus 242 ~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 344555555544 48899999999999889999988765 58999999999875
No 253
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.34 E-value=0.00051 Score=74.53 Aligned_cols=34 Identities=32% Similarity=0.494 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 204 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE 204 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 4689999999999999999999999999999874
No 254
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.31 E-value=0.00015 Score=79.70 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++||+||||||+|+++|..|++.|++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4799999999999999999999999999999873
No 255
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.30 E-value=0.00016 Score=78.25 Aligned_cols=37 Identities=14% Similarity=0.389 Sum_probs=34.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++..+||+|||+|++|+++|..|+++|++|+++|+++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~ 53 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNP 53 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccC
Confidence 3456899999999999999999999999999999975
No 256
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.29 E-value=0.00019 Score=77.30 Aligned_cols=37 Identities=16% Similarity=0.343 Sum_probs=33.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+||+|||||++|+++|..|+++|++|+|+|++..
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 40 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPY 40 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 3468999999999999999999999999999999753
No 257
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.29 E-value=0.0014 Score=71.76 Aligned_cols=99 Identities=25% Similarity=0.320 Sum_probs=70.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~---------------- 241 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG---------MDG-----------EV---------------- 241 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc---------CCH-----------HH----------------
Confidence 468999999999999999999999999999986422100 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcC---C--cEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---G--QCY 231 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~d---g--~~i 231 (678)
...+.+.|.+ .+..++.++++++++.+++++.+++.+ | +++
T Consensus 242 --------------------------------~~~l~~~l~~--~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 287 (491)
T 3urh_A 242 --------------------------------AKQLQRMLTK--QGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTL 287 (491)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEE
T ss_pred --------------------------------HHHHHHHHHh--CCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEE
Confidence 0112222222 234578899999999888888888763 5 589
Q ss_pred eccEEEEecCCCch
Q 005770 232 AGDLLIGADGIWSK 245 (678)
Q Consensus 232 ~a~~vVgADG~~S~ 245 (678)
.+|.||.|.|....
T Consensus 288 ~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 288 DAEVVLIATGRKPS 301 (491)
T ss_dssp EESEEEECCCCEEC
T ss_pred EcCEEEEeeCCccC
Confidence 99999999997543
No 258
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.27 E-value=0.0019 Score=68.87 Aligned_cols=96 Identities=22% Similarity=0.317 Sum_probs=67.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+...... +.+ .+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~~~-----------~~---------------- 189 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA--------APA-----------TL---------------- 189 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc--------cCH-----------HH----------------
Confidence 4689999999999999999999999999999874221000 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+ .+..++.+++|++++ + + .|++.+|+++.+|.|
T Consensus 190 --------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~v 231 (408)
T 2gqw_A 190 --------------------------------ADFVARYHAA--QGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMV 231 (408)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHHHH--cCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEE
Confidence 0112222222 234578899999998 3 3 677789999999999
Q ss_pred EEecCCCch
Q 005770 237 IGADGIWSK 245 (678)
Q Consensus 237 VgADG~~S~ 245 (678)
|.|-|....
T Consensus 232 i~a~G~~p~ 240 (408)
T 2gqw_A 232 VVGIGVLAN 240 (408)
T ss_dssp EECSCEEEC
T ss_pred EECcCCCcc
Confidence 999997643
No 259
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.24 E-value=0.00016 Score=78.54 Aligned_cols=35 Identities=31% Similarity=0.558 Sum_probs=32.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
+..+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 34689999999999999999999999999999984
No 260
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.24 E-value=0.0026 Score=68.80 Aligned_cols=100 Identities=17% Similarity=0.188 Sum_probs=69.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... .++..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~---------------- 193 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK-------------------YFDKEF---------------- 193 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-------------------TSCHHH----------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-------------------hhhhhH----------------
Confidence 468999999999999999999999999999986422100 000000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+ .+..++.+++|++++.+++.+.....+|+++.+|.|
T Consensus 194 --------------------------------~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~v 239 (452)
T 2cdu_A 194 --------------------------------TDILAKDYEA--HGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIA 239 (452)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH--CCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEE
Confidence 0112222322 234588899999998766666533347889999999
Q ss_pred EEecCCCch
Q 005770 237 IGADGIWSK 245 (678)
Q Consensus 237 VgADG~~S~ 245 (678)
|.|.|....
T Consensus 240 v~a~G~~p~ 248 (452)
T 2cdu_A 240 ILCIGFRPN 248 (452)
T ss_dssp EECCCEEEC
T ss_pred EECcCCCCC
Confidence 999997644
No 261
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.22 E-value=0.0026 Score=68.72 Aligned_cols=98 Identities=17% Similarity=0.110 Sum_probs=69.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||+|..|+.+|..|++.|.+|+++++.+...... +.+ .+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~d~-----------~~---------------- 191 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY--------FDK-----------EM---------------- 191 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------CCH-----------HH----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc--------CCH-----------HH----------------
Confidence 4679999999999999999999999999999864221000 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+ .+..++.+++|++++.+++++.+++++| ++.+|.|
T Consensus 192 --------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~V 236 (452)
T 3oc4_A 192 --------------------------------VAEVQKSLEK--QAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSG 236 (452)
T ss_dssp --------------------------------HHHHHHHHHT--TTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEE
T ss_pred --------------------------------HHHHHHHHHH--cCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEE
Confidence 0112222221 2335788999999987777788888777 8999999
Q ss_pred EEecCCCc
Q 005770 237 IGADGIWS 244 (678)
Q Consensus 237 VgADG~~S 244 (678)
|.|-|...
T Consensus 237 v~A~G~~p 244 (452)
T 3oc4_A 237 IFALNLHP 244 (452)
T ss_dssp EECSCCBC
T ss_pred EECcCCCC
Confidence 99999753
No 262
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.20 E-value=0.0022 Score=69.71 Aligned_cols=97 Identities=19% Similarity=0.162 Sum_probs=70.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.+...... +.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------~d------------------------------ 213 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL--------ED------------------------------ 213 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS--------CC------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC--------CC------------------------------
Confidence 4689999999999999999999999999999864211000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeC-CeEEEEEc--CCc--EE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHG-DKVSVVLE--NGQ--CY 231 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~-~~v~v~~~--dg~--~i 231 (678)
..+.+.|.+.+. ..++.++++++++.++ +++.+++. +|+ ++
T Consensus 214 ---------------------------------~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i 259 (466)
T 3l8k_A 214 ---------------------------------QDIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSI 259 (466)
T ss_dssp ---------------------------------HHHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEE
T ss_pred ---------------------------------HHHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEE
Confidence 011122222222 4477889999998877 88888887 676 89
Q ss_pred eccEEEEecCCCch
Q 005770 232 AGDLLIGADGIWSK 245 (678)
Q Consensus 232 ~a~~vVgADG~~S~ 245 (678)
.+|.||.|-|....
T Consensus 260 ~~D~vi~a~G~~p~ 273 (466)
T 3l8k_A 260 FTNSVVLAAGRRPV 273 (466)
T ss_dssp EESCEEECCCEEEC
T ss_pred EcCEEEECcCCCcc
Confidence 99999999997543
No 263
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.19 E-value=0.0029 Score=68.81 Aligned_cols=98 Identities=28% Similarity=0.243 Sum_probs=70.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~---------------- 223 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA---------VDE-----------QV---------------- 223 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc---------cCH-----------HH----------------
Confidence 468999999999999999999999999999986421100 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCC---cEEec
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAG 233 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg---~~i~a 233 (678)
...+.+.|.+ .+..++.+++|++++.+++++.+++.++ +++.+
T Consensus 224 --------------------------------~~~l~~~l~~--~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~ 269 (476)
T 3lad_A 224 --------------------------------AKEAQKILTK--QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAF 269 (476)
T ss_dssp --------------------------------HHHHHHHHHH--TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEE
T ss_pred --------------------------------HHHHHHHHHh--CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEEC
Confidence 0122223322 2345788999999998888888888765 67999
Q ss_pred cEEEEecCCCc
Q 005770 234 DLLIGADGIWS 244 (678)
Q Consensus 234 ~~vVgADG~~S 244 (678)
|.||.|-|...
T Consensus 270 D~vi~a~G~~p 280 (476)
T 3lad_A 270 DKLIVAVGRRP 280 (476)
T ss_dssp SEEEECSCEEE
T ss_pred CEEEEeeCCcc
Confidence 99999999653
No 264
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.19 E-value=0.0023 Score=69.54 Aligned_cols=98 Identities=16% Similarity=0.164 Sum_probs=70.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... ..+ .+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~~~-----------~~---------------- 218 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR----------EDP-----------AI---------------- 218 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT----------SCH-----------HH----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC----------CCH-----------HH----------------
Confidence 46899999999999999999999999999998642110 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+ .+..++.+++|++++.+++.+.++++ +.++.+|.|
T Consensus 219 --------------------------------~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~V 263 (467)
T 1zk7_A 219 --------------------------------GEAVTAAFRA--EGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKL 263 (467)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEE
T ss_pred --------------------------------HHHHHHHHHh--CCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEE
Confidence 0112222222 23457888999999887777777776 458999999
Q ss_pred EEecCCCchh
Q 005770 237 IGADGIWSKV 246 (678)
Q Consensus 237 VgADG~~S~V 246 (678)
|.|.|..+..
T Consensus 264 v~a~G~~p~~ 273 (467)
T 1zk7_A 264 LVATGRTPNT 273 (467)
T ss_dssp EECSCEEESC
T ss_pred EECCCCCcCC
Confidence 9999987553
No 265
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.19 E-value=0.00021 Score=78.35 Aligned_cols=33 Identities=33% Similarity=0.468 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCcEEEEec
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 108 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~-~g~~~~~~e~ 108 (678)
..+||+||||||+|+++|..|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 36899999999999999999999 9999999994
No 266
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.17 E-value=0.0026 Score=69.64 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=70.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHH----cCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKR----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~----~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~ 152 (678)
..+|+|||||+.|+.+|..|++ .|.+|+++++.+..... .+.+ .+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~--------~l~~-----------~~------------ 228 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK--------ILPE-----------YL------------ 228 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT--------TSCH-----------HH------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc--------cCCH-----------HH------------
Confidence 4689999999999999999987 48899999875321000 0000 00
Q ss_pred cceeeeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEe
Q 005770 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (678)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~ 232 (678)
...+.+.|.+ .+..++.+++|++++.+++.+.+++.+|+++.
T Consensus 229 ------------------------------------~~~~~~~l~~--~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~ 270 (493)
T 1m6i_A 229 ------------------------------------SNWTMEKVRR--EGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVE 270 (493)
T ss_dssp ------------------------------------HHHHHHHHHT--TTCEEECSCCEEEEEEETTEEEEEETTSCEEE
T ss_pred ------------------------------------HHHHHHHHHh--cCCEEEeCCEEEEEEecCCeEEEEECCCCEEE
Confidence 0112222222 23458889999999887778888999999999
Q ss_pred ccEEEEecCCCch
Q 005770 233 GDLLIGADGIWSK 245 (678)
Q Consensus 233 a~~vVgADG~~S~ 245 (678)
||+||.|-|....
T Consensus 271 aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 271 TDHIVAAVGLEPN 283 (493)
T ss_dssp ESEEEECCCEEEC
T ss_pred CCEEEECCCCCcc
Confidence 9999999997643
No 267
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.15 E-value=0.0031 Score=69.58 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=73.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
+.+++|||||+.|+.+|..+++.|.+|+|+++... .+ .++..+.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~-L~--------------------~~D~ei~--------------- 266 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV-LR--------------------GFDQQCA--------------- 266 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS-ST--------------------TSCHHHH---------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc-cc--------------------ccchhHH---------------
Confidence 46799999999999999999999999999986421 10 0000000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
..+.+.|.+ ....++.+..+..++..++.+.+++.+++++.+|.|
T Consensus 267 ---------------------------------~~l~~~l~~--~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~v 311 (542)
T 4b1b_A 267 ---------------------------------VKVKLYMEE--QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTV 311 (542)
T ss_dssp ---------------------------------HHHHHHHHH--TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred ---------------------------------HHHHHHHHh--hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEE
Confidence 122233332 233577899999999999999999999999999999
Q ss_pred EEecCCCchhh
Q 005770 237 IGADGIWSKVR 247 (678)
Q Consensus 237 VgADG~~S~VR 247 (678)
+.|-|+.-.+-
T Consensus 312 LvAvGR~Pnt~ 322 (542)
T 4b1b_A 312 LYAIGRKGDID 322 (542)
T ss_dssp EECSCEEESCG
T ss_pred EEcccccCCcc
Confidence 99999765543
No 268
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.10 E-value=0.00032 Score=74.24 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g--~~~~~~e~~~ 110 (678)
..+||+||||||+|+++|..|+++| .+|+|+|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3589999999999999999999999 5689999874
No 269
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.10 E-value=0.0026 Score=69.34 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|+|||||++|+.+|..|++.|.+|+++|+.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 45789999999999999999999999999999864
No 270
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.09 E-value=0.00032 Score=77.97 Aligned_cols=36 Identities=25% Similarity=0.440 Sum_probs=33.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+||+|||+|++|+++|..|++.|++|+|+|+..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 356899999999999999999999999999999975
No 271
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.09 E-value=0.0034 Score=68.64 Aligned_cols=35 Identities=34% Similarity=0.406 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|+|||||+.|+.+|..|++.|.+|+|+|+.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 34689999999999999999999999999999874
No 272
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.09 E-value=0.00028 Score=76.39 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-c------CCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR-K------GFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~-~------g~~~~~~e~~~~ 111 (678)
..+||+||||||+|+.+|..|++ + |++|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 45799999999999999999999 7 999999999754
No 273
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.08 E-value=0.00032 Score=78.90 Aligned_cols=35 Identities=29% Similarity=0.463 Sum_probs=32.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
...+||+||||||+|+++|..|+++|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999974
No 274
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.02 E-value=0.0031 Score=68.37 Aligned_cols=98 Identities=20% Similarity=0.264 Sum_probs=70.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~---------~~~-----------~~---------------- 213 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR---------FDQ-----------DM---------------- 213 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---------cCH-----------HH----------------
Confidence 468999999999999999999999999999986421100 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCe-EEEE-EcCCcEEecc
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVV-LENGQCYAGD 234 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~-v~v~-~~dg~~i~a~ 234 (678)
...+.+.|.+ .+..++.+++|++++.++++ +.|+ +.+|+ +.+|
T Consensus 214 --------------------------------~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD 258 (463)
T 4dna_A 214 --------------------------------RRGLHAAMEE--KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVAD 258 (463)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEES
T ss_pred --------------------------------HHHHHHHHHH--CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeC
Confidence 0112222222 23457889999999887665 6788 88888 9999
Q ss_pred EEEEecCCCch
Q 005770 235 LLIGADGIWSK 245 (678)
Q Consensus 235 ~vVgADG~~S~ 245 (678)
.||.|-|....
T Consensus 259 ~Vv~a~G~~p~ 269 (463)
T 4dna_A 259 QVMLALGRMPN 269 (463)
T ss_dssp EEEECSCEEES
T ss_pred EEEEeeCcccC
Confidence 99999997543
No 275
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.02 E-value=0.00051 Score=78.10 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=33.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+||+|||||++|+++|..|+++|++|+|+|+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4568999999999999999999999999999998753
No 276
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.97 E-value=0.00061 Score=79.04 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=33.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
....+|+|||||++||++|+.|+++|++|+|+|+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 3457999999999999999999999999999998753
No 277
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.97 E-value=0.0018 Score=67.87 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=31.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+|+|||||++|+.+|..|++.|.+|+++|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 689999999999999999999999999999874
No 278
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.97 E-value=0.00052 Score=74.78 Aligned_cols=55 Identities=18% Similarity=0.141 Sum_probs=44.5
Q ss_pred HHHHHHHHhcC----------CceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCch
Q 005770 191 TLQQILAKAVG----------DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (678)
Q Consensus 191 ~l~~~L~~~~~----------~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S~ 245 (678)
.|.+.|.+.+. ...++.+++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHh
Confidence 45556666542 23589999999999999999999999999999999999997543
No 279
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.97 E-value=0.005 Score=62.80 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 4689999999999999999999999999999763
No 280
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.95 E-value=0.0041 Score=64.90 Aligned_cols=106 Identities=19% Similarity=0.218 Sum_probs=68.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||+|++|+.+|..|++.|.+|+++++.+.... + ..+..+ .
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~------------~-------~~d~~~-------------~-- 211 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND------------P-------DADPSV-------------R-- 211 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------------------------CTT-------------S--
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC------------C-------CCCCCc-------------c--
Confidence 35899999999999999999999999999998632110 0 000000 0
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEe-ccE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA-GDL 235 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~-a~~ 235 (678)
.+ --.+..+.+.|.+ .++..++.+++|++++.+++.+.+++.+|+++. +|.
T Consensus 212 ------------------------~~---~~~~~~l~~~l~~-~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~ 263 (369)
T 3d1c_A 212 ------------------------LS---PYTRQRLGNVIKQ-GARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHE 263 (369)
T ss_dssp ------------------------CC---HHHHHHHHHHHHT-TCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSC
T ss_pred ------------------------CC---HHHHHHHHHHHhh-CCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCc
Confidence 00 0001223333322 112457889999999877788888899998665 599
Q ss_pred EEEecCCCc
Q 005770 236 LIGADGIWS 244 (678)
Q Consensus 236 vVgADG~~S 244 (678)
||.|.|...
T Consensus 264 vi~a~G~~~ 272 (369)
T 3d1c_A 264 PILATGFDA 272 (369)
T ss_dssp CEECCCBCG
T ss_pred eEEeeccCC
Confidence 999999754
No 281
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.91 E-value=0.0052 Score=66.90 Aligned_cols=98 Identities=19% Similarity=0.105 Sum_probs=67.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... ++..+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~d~~~---------------- 230 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS--------------------FDSMI---------------- 230 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHH----------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999986422110 00000
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCe--EEEEEcC---C---
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLEN---G--- 228 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~--v~v~~~d---g--- 228 (678)
...+.+.|.+ .+..++.++++++++.++++ +.+++.+ |
T Consensus 231 --------------------------------~~~~~~~l~~--~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 276 (478)
T 3dk9_A 231 --------------------------------STNCTEELEN--AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVM 276 (478)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEE
T ss_pred --------------------------------HHHHHHHHHH--CCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCccc
Confidence 0112222322 23457788899999876555 6677765 2
Q ss_pred -cEEeccEEEEecCCCc
Q 005770 229 -QCYAGDLLIGADGIWS 244 (678)
Q Consensus 229 -~~i~a~~vVgADG~~S 244 (678)
+++.+|.||.|-|...
T Consensus 277 g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 277 TMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp EEEEEESEEEECSCEEE
T ss_pred ceEEEcCEEEEeecccc
Confidence 5789999999999643
No 282
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.88 E-value=0.0045 Score=69.35 Aligned_cols=97 Identities=23% Similarity=0.330 Sum_probs=68.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccccccCCcccccceeeChhHHHHHHhcChhHHHHHHHhcccccccee
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~gl~~~~~~~~~~~~~~~~ 156 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~---------------- 230 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP---------IDY-----------EM---------------- 230 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc---------CCH-----------HH----------------
Confidence 468999999999999999999999999999986421100 000 00
Q ss_pred eeeecCCCceeeeccCCCcccccCCCeEEEeCHHHHHHHHHHhcCCceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEE
Q 005770 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (678)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~v 236 (678)
...+.+.|.+ .+..++.+++|++++.++++ +++.+|+++.+|.|
T Consensus 231 --------------------------------~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~V 274 (588)
T 3ics_A 231 --------------------------------AAYVHEHMKN--HDVELVFEDGVDALEENGAV--VRLKSGSVIQTDML 274 (588)
T ss_dssp --------------------------------HHHHHHHHHH--TTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHHHH--cCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEE
Confidence 0112222222 23447788899998766554 56788999999999
Q ss_pred EEecCCCch
Q 005770 237 IGADGIWSK 245 (678)
Q Consensus 237 VgADG~~S~ 245 (678)
|.|-|....
T Consensus 275 i~a~G~~p~ 283 (588)
T 3ics_A 275 ILAIGVQPE 283 (588)
T ss_dssp EECSCEEEC
T ss_pred EEccCCCCC
Confidence 999998654
No 283
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.86 E-value=0.00072 Score=73.32 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g--~~~~~~e~~~~ 111 (678)
..++|+||||||+|+.+|..|+++| ++|+|||+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 3579999999999999999999999 99999999754
No 284
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.79 E-value=0.00062 Score=75.23 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~-~g~~~~~~e~~~ 110 (678)
.++|+||||+|++|+.+|..|++ .|++|+|+|+..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 46999999999999999999997 689999999874
No 285
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.78 E-value=0.0065 Score=65.53 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 3589999999999999999999999999999864
No 286
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.78 E-value=0.00082 Score=80.26 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
..+||+||||||+|+++|..|+++|+ +|+|||+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 35799999999999999999999999 799999974
No 287
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.74 E-value=0.00085 Score=79.54 Aligned_cols=36 Identities=31% Similarity=0.493 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+||+||||||+|+++|+.|+++|++|+|||+.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~ 162 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 358999999999999999999999999999998753
No 288
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.73 E-value=0.0041 Score=63.86 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~ 206 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD 206 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999999863
No 289
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.73 E-value=0.00043 Score=75.85 Aligned_cols=34 Identities=24% Similarity=0.372 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+||+||||||+|+++|..|+++ ++|+|+|+.+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 357999999999999999999999 9999999875
No 290
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.73 E-value=0.0085 Score=60.80 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4689999999999999999999999999998763
No 291
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.68 E-value=0.00058 Score=75.58 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|+||||||++|+++|..|++ |.+|+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 45999999999999999999999 999999999753
No 292
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.65 E-value=0.0063 Score=65.40 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 3589999999999999999999999999999864
No 293
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.64 E-value=0.001 Score=73.99 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC-CcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g-~~~~~~e~~~~ 111 (678)
..+|+||||||.||+++|..|++.| ++|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4599999999999999999999998 79999999764
No 294
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.63 E-value=0.011 Score=64.43 Aligned_cols=33 Identities=33% Similarity=0.346 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 357999999999999999999999999999874
No 295
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.57 E-value=0.0018 Score=71.20 Aligned_cols=36 Identities=31% Similarity=0.477 Sum_probs=33.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|++|||+|++|+++|..|++.|.+|+|+|+..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 456999999999999999999999999999999875
No 296
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.52 E-value=0.0016 Score=71.43 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+||+|||+|++|+++|..|++.|++|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 45899999999999999999999999999999875
No 297
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.44 E-value=0.0016 Score=72.48 Aligned_cols=35 Identities=31% Similarity=0.556 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~-g~~~~~~e~~~ 110 (678)
..+|+||||||.||+++|..|++. |++|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 89999999976
No 298
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.43 E-value=0.0097 Score=61.09 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999999863
No 299
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.38 E-value=0.0087 Score=62.28 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999999863
No 300
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.31 E-value=0.0026 Score=71.16 Aligned_cols=36 Identities=36% Similarity=0.594 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHH-cCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~-~g~~~~~~e~~~ 110 (678)
+..+|++|||+|++|+++|..|++ .|++|+|+|+..
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 456999999999999999999999 899999999875
No 301
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.27 E-value=0.024 Score=61.73 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+|+|||||+.|+.+|..|++.|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 357999999999999999999999999999875
No 302
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.18 E-value=0.0017 Score=71.98 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-cCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~-~g~~~~~~e~~~~ 111 (678)
.+|++|||||.+|+++|..|++ .|++|+|+|+.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 4899999999999999999998 7999999998753
No 303
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.14 E-value=0.032 Score=61.51 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+|+|||+|..|+-+|..|++.|.+|++++|.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 346899999999999999999999999999999865
No 304
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.14 E-value=0.015 Score=59.09 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 4689999999999999999999999999999863
No 305
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.13 E-value=0.019 Score=58.19 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 4689999999999999999999999999999763
No 306
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.12 E-value=0.032 Score=56.39 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 4689999999999999999999999999998763
No 307
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.12 E-value=0.025 Score=57.70 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3689999999999999999999999999999863
No 308
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.08 E-value=0.0033 Score=69.66 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~-g~~~~~~e~~~ 110 (678)
..+|++|||+|++|+++|..|++. |.+|+|+|+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 468999999999999999999998 99999999874
No 309
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.95 E-value=0.026 Score=57.74 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 4689999999999999999999999999999863
No 310
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.90 E-value=0.0092 Score=52.94 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
....|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345799999999999999999999999999999754
No 311
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.86 E-value=0.0097 Score=53.79 Aligned_cols=36 Identities=31% Similarity=0.345 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
...|+|+|+|..|..+|..|.+.|++|+++|+++..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 467999999999999999999999999999987543
No 312
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.83 E-value=0.027 Score=61.56 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=26.8
Q ss_pred CcEEEEccccCCCCCCCcchhhHHHHHHHHHHHHHHHHhh
Q 005770 363 GRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACK 402 (678)
Q Consensus 363 grv~LvGDAAH~~~P~~GqG~n~gl~Da~~La~~L~~~~~ 402 (678)
.+|+.+||+|..-.|-.+| .|.+.+..+|+.|....+
T Consensus 365 ~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~~~~ 401 (502)
T 4g6h_A 365 NNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDKMAQ 401 (502)
T ss_dssp SSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHHHhc
Confidence 5788888888776665554 577888888887776543
No 313
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.75 E-value=0.078 Score=59.27 Aligned_cols=32 Identities=25% Similarity=0.147 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
.+|+|||||..|+.+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999976
No 314
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.74 E-value=0.0082 Score=66.94 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+||+|||+|+.|..+|..|++.|.+|+++||++
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~ 41 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRS 41 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 36999999999999999999999999999999985
No 315
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.71 E-value=0.056 Score=54.92 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~ 187 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYM 187 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcC
Confidence 368999999999999999999999999999975
No 316
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=95.60 E-value=0.089 Score=57.70 Aligned_cols=32 Identities=25% Similarity=0.223 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
.+|+|||||+.|+.+|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999974
No 317
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.59 E-value=0.011 Score=52.31 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..|+|+|+|..|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999874
No 318
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.56 E-value=0.033 Score=57.15 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~ 187 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRR 187 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcC
Confidence 468999999999999999999999999999976
No 319
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.55 E-value=0.014 Score=64.42 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+|+|||+|.+|+.+|..|++.|.+|++++|.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 446899999999999999999999999999999864
No 320
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.54 E-value=0.023 Score=61.04 Aligned_cols=33 Identities=12% Similarity=0.007 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc-EEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~-~~~~e~~ 109 (678)
..+|+|||+|.+|+-+|..|++.|.+ |+|+++.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 245 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC
Confidence 46799999999999999999999999 9999886
No 321
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.53 E-value=0.012 Score=51.68 Aligned_cols=33 Identities=27% Similarity=0.502 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 322
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.45 E-value=0.016 Score=52.13 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
....|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34679999999999999999999999999999863
No 323
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.13 E-value=0.059 Score=54.84 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4689999999999999999999999999998763
No 324
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.13 E-value=0.018 Score=48.88 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC-CcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g-~~~~~~e~~~~ 111 (678)
.+|+|+|+|..|..++..|.++| ++|+++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA 40 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH
Confidence 57999999999999999999999 99999998753
No 325
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.03 E-value=0.063 Score=53.62 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=29.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+|+|||+|+.|+.+|..|++.| +|+++++.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~ 172 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNG 172 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECC
Confidence 468999999999999999999999 99999875
No 326
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.54 E-value=0.12 Score=56.78 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||||..|+.+|..|++.|.+|+++++.+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 4689999999999999999999999999999763
No 327
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.54 E-value=0.034 Score=51.60 Aligned_cols=35 Identities=20% Similarity=0.090 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~-g~~~~~~e~~~ 110 (678)
...+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 345799999999999999999999 99999999874
No 328
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.54 E-value=0.031 Score=49.23 Aligned_cols=34 Identities=26% Similarity=0.243 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~ 40 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEE 40 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999998643
No 329
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.34 E-value=0.03 Score=56.86 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 589999999999999999999999999999864
No 330
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=94.21 E-value=0.13 Score=58.54 Aligned_cols=34 Identities=24% Similarity=0.207 Sum_probs=31.0
Q ss_pred CCeEEEEC--CCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAG--GGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG--~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+||| +|.+|+.+|..|++.|.+|+++++.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 45799999 99999999999999999999999763
No 331
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.11 E-value=0.03 Score=57.70 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=30.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|+|||+|..|+.+|..|++.| +|+++.+..
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 3468999999999999999999999 799998874
No 332
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.10 E-value=0.55 Score=51.04 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc--CCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~ 110 (678)
..+|+|||+|-.|.-++..|+++ +.+|+++=|.+
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 45799999999999999999876 78999998875
No 333
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.05 E-value=0.039 Score=58.00 Aligned_cols=35 Identities=26% Similarity=0.203 Sum_probs=32.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEY 180 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 35799999999999999999999999999998754
No 334
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.05 E-value=0.35 Score=52.02 Aligned_cols=35 Identities=14% Similarity=0.048 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHH--------------------HcCC-cEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAK--------------------RKGF-EVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~--------------------~~g~-~~~~~e~~~~ 111 (678)
..+|+|||+|.+|+-+|..|+ +.|. +|+|+++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999 6788 6999998753
No 335
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.99 E-value=0.043 Score=55.75 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|.|||+|..|...|..++..|++|+|+|..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34679999999999999999999999999999864
No 336
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.97 E-value=0.054 Score=54.83 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+|.|||+|..|..+|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999874
No 337
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.94 E-value=0.052 Score=54.40 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4579999999999999999999999999999874
No 338
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.92 E-value=0.041 Score=52.72 Aligned_cols=33 Identities=18% Similarity=0.443 Sum_probs=31.0
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
+|+|+|+|..|..+|..|.++|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998754
No 339
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.87 E-value=0.046 Score=55.75 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346799999999999999999999999999998743
No 340
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.72 E-value=0.047 Score=55.21 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||||..|+.+|..|++.|.+|+|+++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999864
No 341
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.58 E-value=0.074 Score=54.56 Aligned_cols=34 Identities=12% Similarity=0.335 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
..+|+|||||-.|..+|..|++.|+ +|+|+|+++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3689999999999999999999998 999999874
No 342
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=93.48 E-value=0.25 Score=53.13 Aligned_cols=35 Identities=26% Similarity=0.282 Sum_probs=30.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--------------------CC-cEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRK--------------------GF-EVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~--------------------g~-~~~~~e~~~ 110 (678)
...+|+|||+|.+|+-+|..|++. |. +|+|+++..
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 346899999999999999999974 65 899999874
No 343
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.12 E-value=0.078 Score=54.54 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
.++|+|||+|-.|.++|..|++.|++|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 357999999999999999999999999999974
No 344
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.11 E-value=0.08 Score=54.06 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
++|+|||+|-.|.++|..|++.|++|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999986
No 345
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=92.97 E-value=0.37 Score=54.56 Aligned_cols=29 Identities=17% Similarity=0.124 Sum_probs=26.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEE
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLV 105 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~ 105 (678)
..+|+|||||.+|+.+|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 46899999999999999999999987764
No 346
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.96 E-value=0.077 Score=55.02 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=32.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+..++|.|||+|-.|.++|..|++.|++|+++++++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 345689999999999999999999999999999863
No 347
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.85 E-value=0.11 Score=52.79 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=32.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEecc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~ 109 (678)
+...+|.|||+|..|..+|..|+..|+ +|+++|..
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 445689999999999999999999999 99999986
No 348
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.65 E-value=0.091 Score=54.42 Aligned_cols=34 Identities=35% Similarity=0.401 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.++|+|||+|-.|..+|..|++.|++|+++++.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999863
No 349
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=92.57 E-value=0.27 Score=58.12 Aligned_cols=33 Identities=21% Similarity=0.103 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+|+|||+|+.|+.+|..|++.|.+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 579999999999999999999999999999863
No 350
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.53 E-value=0.094 Score=56.70 Aligned_cols=36 Identities=22% Similarity=0.412 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..++|.|||+|-.|+.+|..|++.|++|+++|+++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 357899999999999999999999999999998753
No 351
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.51 E-value=0.12 Score=52.71 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
..+|.|||+|-.|..+|..|++.|+ +|+++|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3589999999999999999999999 999999874
No 352
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.50 E-value=0.11 Score=49.66 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=32.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
......|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 445678999999999999999999999999999864
No 353
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.49 E-value=0.12 Score=49.02 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|.|||+|-.|.++|..|++.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998754
No 354
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.48 E-value=0.11 Score=55.82 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|+|||.|.+|+++|..|+++|++|+++|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34689999999999999999999999999999864
No 355
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.48 E-value=0.098 Score=52.97 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
++|.|||+|..|..+|..|++.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999999986
No 356
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.44 E-value=0.083 Score=52.31 Aligned_cols=34 Identities=32% Similarity=0.444 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
....|+|||||.+|+..|..|.+.|.+|+|+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4578999999999999999999999999999875
No 357
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.37 E-value=0.14 Score=51.89 Aligned_cols=35 Identities=26% Similarity=0.488 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 358
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.33 E-value=0.12 Score=51.57 Aligned_cols=32 Identities=28% Similarity=0.323 Sum_probs=30.4
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999875
No 359
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.32 E-value=0.13 Score=54.48 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+|.|||.|-+||.+|..|+++|++|+.+|.++.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 346899999999999999999999999999998753
No 360
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.31 E-value=0.12 Score=52.64 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
++|+|||+|-+|..+|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999999 999999863
No 361
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.19 E-value=0.097 Score=53.22 Aligned_cols=32 Identities=31% Similarity=0.517 Sum_probs=29.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
++|+|||+|-.|.++|..|++.|++|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 57999999999999999999999999999986
No 362
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.19 E-value=0.055 Score=58.28 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=32.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
.++|+|+|+|-+|..+|..|...|++|+++|+++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~ 38 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDR 38 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence 467999999999999999999999999999998643
No 363
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.16 E-value=0.11 Score=55.63 Aligned_cols=34 Identities=35% Similarity=0.366 Sum_probs=31.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
++|.|||+|-.|+.+|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5799999999999999999999999999998753
No 364
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.12 E-value=0.15 Score=52.04 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=32.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
|+..+|.|||+|.+|.++|..|+..|+ +++++|..+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 445689999999999999999999999 999999864
No 365
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.04 E-value=0.16 Score=51.88 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
..+|+|||+|-+|..+|..|+..|+ +|+++|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3589999999999999999999999 999999864
No 366
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.01 E-value=0.096 Score=56.09 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|+|||.|++|+++|..|+++|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 35799999999999999999999999999998653
No 367
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.93 E-value=0.15 Score=52.08 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
.+|.|||||-.|..+|..|+..|+ +|+++|.++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999999 999999874
No 368
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.83 E-value=0.18 Score=48.69 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=32.1
Q ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 74 ENKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 74 ~~~~~~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+.+.|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 345578999998 99999999999999999999998753
No 369
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.75 E-value=0.19 Score=51.03 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999864
No 370
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.71 E-value=0.19 Score=53.74 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999998753
No 371
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.66 E-value=0.17 Score=51.34 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=32.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
+...+|.|||.|..|.++|..|++.|+ +|+++|+++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 344689999999999999999999999 999999863
No 372
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.60 E-value=0.15 Score=54.95 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=32.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC-cEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK-GF-EVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~-g~-~~~~~e~~~~ 111 (678)
.++|.|||+|-.|+.+|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35899999999999999999999 99 9999999865
No 373
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.57 E-value=0.18 Score=52.82 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|+|+|+|++|+.+|..|...|.+|+++|+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34689999999999999999999999999999874
No 374
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.53 E-value=0.13 Score=51.83 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++|+|||+|-.|.++|..|++.|++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999874
No 375
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.41 E-value=0.17 Score=51.14 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=30.0
Q ss_pred eEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
+|+|||+|-+|..+|..|+..|+ +|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999863
No 376
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.40 E-value=0.2 Score=50.93 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=32.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
|...+|.|||+|.+|.++|..|+..|+ ++.++|..+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 345689999999999999999999998 999999864
No 377
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.29 E-value=0.16 Score=53.68 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35699999999999999999999999999998864
No 378
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.23 E-value=0.19 Score=52.18 Aligned_cols=35 Identities=31% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999874
No 379
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.23 E-value=0.17 Score=49.47 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
..+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999998 899999874
No 380
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.19 E-value=0.2 Score=51.09 Aligned_cols=34 Identities=24% Similarity=0.483 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~ 109 (678)
...+|+|||+|.+|.++|..|+..|+ +++++|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 34689999999999999999999998 89999975
No 381
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.17 E-value=0.19 Score=53.61 Aligned_cols=37 Identities=32% Similarity=0.425 Sum_probs=33.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
...++.|||.|-.|+.+|..|++.|++|+++|+++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3578999999999999999999999999999998653
No 382
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.15 E-value=0.18 Score=54.37 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||+|..|..+|..|++.|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 383
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.05 E-value=0.2 Score=48.83 Aligned_cols=37 Identities=30% Similarity=0.303 Sum_probs=32.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
....+|.|||+|-.|..+|..|++.|++|++++|++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 3457899999999999999999999999999998754
No 384
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.02 E-value=0.19 Score=50.82 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||.|-.|..+|..|++.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3689999999999999999999999999999863
No 385
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.96 E-value=0.19 Score=52.11 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=31.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+..++|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 445789999999999999999999999999999874
No 386
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.96 E-value=0.18 Score=51.20 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~ 109 (678)
...+|.|||.|..|..+|..|++.|+ +|+++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999999 99999986
No 387
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.90 E-value=0.17 Score=53.61 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
.++|.|||+|-.|+.+|..|++ |++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3689999999999999999998 999999998754
No 388
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.87 E-value=0.093 Score=46.47 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...|+|||+|..|..+|..|++.|++|+++++.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4679999999999999999999999999999864
No 389
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.79 E-value=0.14 Score=51.52 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|.|||.|-.|..+|..|++.|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 390
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.75 E-value=0.24 Score=49.52 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
++|.|||.|-.|..+|..|++.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998753
No 391
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.66 E-value=0.16 Score=54.31 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=30.7
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
+|.|||+|-.|+.+|..|++.|++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 699999999999999999999999999998753
No 392
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.63 E-value=0.15 Score=48.95 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEE-Eeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~-~e~~~ 110 (678)
.++|.|||+|-.|..+|..|++.|++|++ ++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 35799999999999999999999999999 88764
No 393
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.57 E-value=0.23 Score=50.53 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
+..+|+|||+|-+|.++|..|+..|+ ++.++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 899999864
No 394
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.53 E-value=0.21 Score=53.99 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 45799999999999999999999999999998743
No 395
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.50 E-value=0.24 Score=50.43 Aligned_cols=35 Identities=20% Similarity=0.431 Sum_probs=30.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEecc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~ 109 (678)
|...+|+|||+|-+|.++|..|+.+|+ .+.++|.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 345789999999999999999999986 89999875
No 396
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.45 E-value=0.22 Score=50.73 Aligned_cols=32 Identities=22% Similarity=0.458 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
..+|+|||+|-.|.++|..|++.|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 357999999999999999999999999999 65
No 397
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.43 E-value=0.23 Score=50.25 Aligned_cols=32 Identities=31% Similarity=0.391 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++|+|||+|-.|.++|..|+ .|++|++++|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999863
No 398
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.36 E-value=0.27 Score=46.83 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 399
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.28 E-value=0.23 Score=49.79 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
....|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4578999999999999999999 999999999864
No 400
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.28 E-value=0.25 Score=50.60 Aligned_cols=34 Identities=32% Similarity=0.560 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
.+.+|.|||+|-.|.++|..|++.|++|++++|.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4578999999999999999999999999999986
No 401
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.27 E-value=0.26 Score=49.92 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=29.4
Q ss_pred eEEEECCCHHHHHHHHHHHHc--CCcEEEEeccc
Q 005770 79 RILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~ 110 (678)
+|+|||+|-.|..+|..|++. |++|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 78999999874
No 402
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.22 E-value=0.21 Score=50.84 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 34689999999999999999999999999999874
No 403
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.20 E-value=0.26 Score=50.33 Aligned_cols=33 Identities=33% Similarity=0.303 Sum_probs=30.2
Q ss_pred CeEEEECCCHHHHH-HHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLV-FALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~-~a~~l~~~g~~~~~~e~~~ 110 (678)
.+|.|||.|.+|++ +|..|+++|++|++.|++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 57999999999996 8999999999999999863
No 404
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.14 E-value=0.3 Score=49.62 Aligned_cols=34 Identities=24% Similarity=0.558 Sum_probs=30.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~ 109 (678)
...+|+|||+|.+|.++|+.|+..|+ ++.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999886 79999976
No 405
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.00 E-value=0.25 Score=53.25 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 4689999999999999999999999999999864
No 406
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.91 E-value=0.24 Score=49.73 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=30.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
++|+|||+|..|.++|..|+..|+ ++.++|+.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 369999999999999999999999 899999863
No 407
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.80 E-value=0.31 Score=51.33 Aligned_cols=34 Identities=29% Similarity=0.425 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 408
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.79 E-value=0.32 Score=49.27 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
.+|+|||+|-+|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 579999999999999999999997 999999763
No 409
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.77 E-value=0.33 Score=48.20 Aligned_cols=35 Identities=31% Similarity=0.374 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
.+.|+|.|+|-.|..++..|.++|++|+++.|...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 35799999999999999999999999999998754
No 410
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.73 E-value=0.1 Score=50.23 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEec
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~ 108 (678)
.++|.|||.|..|.++|..|+++|++|+.+++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 35799999999999999999999999999986
No 411
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.73 E-value=0.24 Score=50.68 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=29.0
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEec
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~ 108 (678)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 412
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.64 E-value=0.21 Score=50.54 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHc-----C-CcEEEEec
Q 005770 78 LRILVAGGGIGGLVFALAAKRK-----G-FEVLVFEK 108 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~-----g-~~~~~~e~ 108 (678)
++|.|||+|..|..+|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 413
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.56 E-value=0.35 Score=48.88 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999874
No 414
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.45 E-value=0.33 Score=47.69 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC----CcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g----~~~~~~e~~~~ 111 (678)
.++|.|||+|-.|..+|..|++.| ++|.++++.+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 357999999999999999999999 79999998753
No 415
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=89.43 E-value=0.27 Score=54.18 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...+|+|||+|.+|+.+|..|++.|.+|++++|.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 346899999999999999999999999999999864
No 416
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.38 E-value=0.24 Score=53.56 Aligned_cols=38 Identities=26% Similarity=0.409 Sum_probs=32.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
.|.+.+|.|||+|..|..+|..|++.|++|++++|.+.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 35567899999999999999999999999999998743
No 417
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.29 E-value=0.32 Score=50.40 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...|+|+|+|.+|+.++..|+..|.+|+++++.+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999863
No 418
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.24 E-value=0.36 Score=50.56 Aligned_cols=35 Identities=34% Similarity=0.421 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+|+|+|+|.+|+.+|..+...|.+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999863
No 419
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.24 E-value=0.49 Score=48.09 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
..+|.|||+|.+|..+|..|+..|+ ++.++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999998 899999753
No 420
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.13 E-value=0.25 Score=53.19 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~ 111 (678)
++|.|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5799999999999999999999 899999998753
No 421
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.07 E-value=0.27 Score=49.16 Aligned_cols=33 Identities=30% Similarity=0.376 Sum_probs=30.8
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
+|.|||.|-.|..+|..|++.|++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 422
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.05 E-value=0.35 Score=50.32 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
....|+|+|+|.+|+.+|..|+..|.+|+++|+++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999763
No 423
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.05 E-value=0.49 Score=44.04 Aligned_cols=35 Identities=34% Similarity=0.487 Sum_probs=31.8
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 78 ~~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
+.|+|.|| |-.|..++..|.++|++|+++.|++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~ 39 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh
Confidence 57999999 999999999999999999999987543
No 424
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.96 E-value=0.27 Score=49.33 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++|.|||+|..|..+|..|++.|++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 425
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.92 E-value=0.35 Score=47.96 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++|+|.|||-.|..++..|.++|++|+++.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999999864
No 426
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.86 E-value=0.34 Score=49.33 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=29.9
Q ss_pred eEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
+|.|||+|-.|..+|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999863
No 427
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.80 E-value=0.38 Score=48.91 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC-CcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g-~~~~~~e~~~ 110 (678)
.+|.|||.|-.|..+|..|++.| ++|+++++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999874
No 428
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.76 E-value=0.25 Score=52.10 Aligned_cols=32 Identities=31% Similarity=0.330 Sum_probs=29.6
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
+|.|||+|-+|+.+|..|++ |++|+++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~ 33 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPS 33 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHH
Confidence 69999999999999999999 999999998753
No 429
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.75 E-value=0.31 Score=52.73 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~~~ 111 (678)
++|.|||.|-+|+.+|..|++. |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5799999999999999999998 799999998754
No 430
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.74 E-value=0.4 Score=48.81 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~ 109 (678)
...+|+|||+|.+|.++|..|+..|+ ++.|+|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 44689999999999999999999998 89999975
No 431
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.66 E-value=0.37 Score=48.78 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=30.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
++|.|||+|.+|.++|..|+..|+ ++.++|..+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 369999999999999999999998 899999864
No 432
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.65 E-value=0.24 Score=51.09 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC-------CcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g-------~~~~~~e~~~~ 111 (678)
.++|.|||+|-.|.++|..|++.| ++|+++++.+.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 357999999999999999999999 99999998743
No 433
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.61 E-value=0.37 Score=47.82 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=29.3
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
+|.|||+|..|..+|..|++.|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 6999999999999999999999999999876
No 434
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.61 E-value=0.46 Score=47.30 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---cEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGF---EVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~---~~~~~e~~~ 110 (678)
..+|.|||+|-.|.++|..|.+.|+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4679999999999999999999999 999999874
No 435
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=88.60 E-value=1.5 Score=46.08 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=29.5
Q ss_pred ceEEeCCeEEEEEEeCCeEEEEEcCCcEEeccEEEEecCCCc
Q 005770 203 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 244 (678)
Q Consensus 203 ~~i~~~~~v~~~~~~~~~v~v~~~dg~~i~a~~vVgADG~~S 244 (678)
..++.+++|++++.+ + +++++|+++.+|+||.|-|...
T Consensus 233 V~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 233 IKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp CEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEEC
T ss_pred CEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCc
Confidence 347778888888643 3 6778999999999999998643
No 436
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.55 E-value=0.19 Score=48.52 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
....|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 34579999999999999999999999 999998754
No 437
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.45 E-value=0.32 Score=48.87 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||+|-.|..+|..|++.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 438
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.36 E-value=0.41 Score=51.52 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|.|||.|..|..+|..|+++|++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999998754
No 439
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.35 E-value=0.33 Score=48.87 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 440
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.30 E-value=0.43 Score=45.05 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=29.8
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 79 RILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG-~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+|+|+| +|-.|..+|..|++.|++|++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999863
No 441
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.24 E-value=0.42 Score=48.70 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC----CcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g----~~~~~~e~~~ 110 (678)
..++|.|||+|-.|..+|..|++.| ++|++++|.+
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3457999999999999999999999 8999999864
No 442
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.12 E-value=0.28 Score=50.99 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.1
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 443
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.02 E-value=0.44 Score=48.04 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=30.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
.+|.|||||.+|..+|..|+.+|+ +++|+|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 689999999999999999999999 999999864
No 444
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.95 E-value=0.56 Score=46.43 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
....|+|+|+|-+|.++|..|++.|.+|++++|.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3467999999999999999999999999999876
No 445
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.93 E-value=0.47 Score=48.62 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||.|..|.++|..|.+.|++|+++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 446
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.91 E-value=0.43 Score=47.63 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45789999999999999999999998 788999864
No 447
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.87 E-value=0.41 Score=47.01 Aligned_cols=31 Identities=16% Similarity=0.375 Sum_probs=29.3
Q ss_pred eEEEECCCHHHHHHHHHHHHcC-CcEEEEecc
Q 005770 79 RILVAGGGIGGLVFALAAKRKG-FEVLVFEKD 109 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g-~~~~~~e~~ 109 (678)
+|.|||+|-.|..+|..|++.| ++|+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 6999999999999999999999 999999986
No 448
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.86 E-value=0.5 Score=47.99 Aligned_cols=34 Identities=21% Similarity=0.493 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~ 109 (678)
+..+|+|||+|-+|.++|..|+..++ ++.|+|.+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 44789999999999999999999987 79999875
No 449
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.82 E-value=0.51 Score=49.20 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
....|+|+|+|.+|+.+|..++..|.+|+++|+.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35689999999999999999999999999999863
No 450
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.81 E-value=0.47 Score=48.53 Aligned_cols=39 Identities=28% Similarity=0.267 Sum_probs=30.9
Q ss_pred CCCCCCeEEEECC-CHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 73 SENKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 73 ~~~~~~~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
+......|+|.|| |-.|..++..|.++|++|++++|.+.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3445578999999 99999999999999999999998753
No 451
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=87.78 E-value=0.54 Score=50.42 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
...+|+|||||.+|+-+|..+.+.|. +|+++++.+
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 45689999999999999999999998 499999874
No 452
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=87.74 E-value=0.5 Score=48.87 Aligned_cols=36 Identities=31% Similarity=0.415 Sum_probs=32.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEecc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~ 109 (678)
...+.+|+|+|||-||..+|..|...|. +|+++|++
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 3456899999999999999999999999 99999986
No 453
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.71 E-value=0.56 Score=44.24 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=30.2
Q ss_pred eEEEECC-CHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 79 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 79 ~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
+|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 6999996 99999999999999999999998753
No 454
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.62 E-value=0.57 Score=47.72 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=31.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEecc
Q 005770 75 NKKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (678)
Q Consensus 75 ~~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~ 109 (678)
....+|.|||+|-+|.++|..|+.+|+ ++.|+|..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 345789999999999999999999998 89999975
No 455
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.43 E-value=0.46 Score=48.02 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC--CcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g--~~~~~~e~~~ 110 (678)
++|+|||+|-.|..+|..|++.| .+|+++|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 6899999863
No 456
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.29 E-value=0.48 Score=47.60 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=30.4
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG-~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+|.||| +|-.|.++|..|++.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4699999 99999999999999999999999763
No 457
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.28 E-value=0.5 Score=46.91 Aligned_cols=31 Identities=29% Similarity=0.607 Sum_probs=29.1
Q ss_pred eEEEECCCHHHHHHHHHHHHcCC--cEEEEecc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~ 109 (678)
+|.|||+|..|..+|..|++.|+ +|++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 69999999999999999999999 89999876
No 458
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.12 E-value=0.61 Score=44.17 Aligned_cols=32 Identities=38% Similarity=0.597 Sum_probs=30.0
Q ss_pred eEEEECC-CHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 79 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+|+|.|| |-.|..++..|.++|++|+++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999874
No 459
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.05 E-value=0.62 Score=46.42 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=30.2
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCcEEEEecc
Q 005770 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 78 ~~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
.+|.|||+ |-.|..+|..|++.|++|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 47999999 999999999999999999999976
No 460
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=86.97 E-value=0.59 Score=49.98 Aligned_cols=34 Identities=38% Similarity=0.283 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
....|+|+|+|.+|..+|..|+..|.+|+++|++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4568999999999999999999999999999876
No 461
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=86.85 E-value=0.66 Score=47.54 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=30.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCC--cEEEEeccc
Q 005770 76 KKLRILVAGG-GIGGLVFALAAKRKGF--EVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~-G~~G~~~a~~l~~~g~--~~~~~e~~~ 110 (678)
...+|+|||+ |-+|.++|..|+.+|+ +++|+|.+.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 3468999998 9999999999999996 899999753
No 462
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.83 E-value=0.53 Score=50.78 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||+|..|..+|..|++.|++|.+++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4679999999999999999999999999999864
No 463
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.63 E-value=0.6 Score=46.88 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~ 109 (678)
....|+|+|+|.+|..+|..|++.|. +|+|+.|.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34679999999999999999999998 89999886
No 464
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.58 E-value=0.65 Score=47.27 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
...+|+|||+|-+|..+|..|++.|+ +++|+|.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 35789999999999999999999999 688999865
No 465
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.58 E-value=0.53 Score=53.57 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999874
No 466
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.53 E-value=0.61 Score=50.49 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..+|.|||.|..|..+|..|+++|++|++++|.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999998753
No 467
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.53 E-value=0.68 Score=46.22 Aligned_cols=33 Identities=30% Similarity=0.574 Sum_probs=30.5
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++|+|.|| |-.|..++..|.++|++|+++-|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46999999 9999999999999999999998864
No 468
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.52 E-value=0.52 Score=47.17 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=30.0
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+|.|||+|-.|..+|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999999864
No 469
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.49 E-value=0.59 Score=50.10 Aligned_cols=34 Identities=21% Similarity=0.110 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
....|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4578999999999999999999999999999975
No 470
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.46 E-value=0.73 Score=45.39 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999998874
No 471
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=86.45 E-value=0.65 Score=47.97 Aligned_cols=36 Identities=17% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEecc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~ 109 (678)
.....+|+|+|||-+|..+|..|...|. +|+++|+.
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3456899999999999999999999999 79999986
No 472
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.34 E-value=0.88 Score=44.57 Aligned_cols=36 Identities=25% Similarity=0.163 Sum_probs=31.5
Q ss_pred CCCCeEEEECC-C-HHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGG-G-IGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~-G-~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.....|+|.|| | -.|..+|..|+++|++|++++|+.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 45567999999 7 599999999999999999998863
No 473
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=86.33 E-value=0.46 Score=50.34 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=31.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
.+..|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 5789999999999999999999999999998754
No 474
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.19 E-value=0.61 Score=50.37 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
++|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 475
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.18 E-value=0.68 Score=45.00 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC----cEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGF----EVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~----~~~~~e~~~ 110 (678)
.+|.|||+|-.|..+|..|.+.|+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 469999999999999999999998 999999864
No 476
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.17 E-value=0.63 Score=44.23 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=31.6
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 78 ~~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
..|+|.|| |-.|..++..|.++|++|+++.|.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 57999996 999999999999999999999997543
No 477
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=86.15 E-value=0.65 Score=50.17 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 4689999999999999999999999999999874
No 478
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=86.09 E-value=0.47 Score=49.42 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC-------CcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g-------~~~~~~e~~~ 110 (678)
.+|.|||+|-.|.++|..|++.| ++|+++++.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 36999999999999999999999 9999999864
No 479
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.09 E-value=0.6 Score=45.60 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
..+|+|||+|-+|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999999 788999864
No 480
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.82 E-value=0.81 Score=45.82 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
....|.|||+|.+|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999864
No 481
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.70 E-value=0.59 Score=50.44 Aligned_cols=33 Identities=36% Similarity=0.582 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
++|.|||+|-.|..+|..|+++|++|++++|.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 482
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.52 E-value=0.41 Score=50.41 Aligned_cols=30 Identities=33% Similarity=0.543 Sum_probs=28.1
Q ss_pred CeEEEECCCHHHHHHHHHHHH-cCCcEEEEe
Q 005770 78 LRILVAGGGIGGLVFALAAKR-KGFEVLVFE 107 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~-~g~~~~~~e 107 (678)
++|+|||+|-.|.++|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 499999998
No 483
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.51 E-value=0.61 Score=45.82 Aligned_cols=32 Identities=34% Similarity=0.466 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCc-EEEEecc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFE-VLVFEKD 109 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~-~~~~e~~ 109 (678)
++|.|||+|-.|..+|..|++.|++ |.++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 5799999999999999999999999 8899876
No 484
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=85.49 E-value=0.78 Score=47.39 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
..|+|+|||.-|..+|..+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4699999999999999999999999999998754
No 485
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.41 E-value=0.87 Score=45.76 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
....|.|||+|.+|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45689999999999999999999999999999864
No 486
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=85.40 E-value=0.63 Score=52.91 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3569999999999999999999999999999874
No 487
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=85.26 E-value=0.72 Score=45.70 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..+|+|||+|-+|.++|..|.+.|++|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998863
No 488
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.24 E-value=0.66 Score=45.92 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~ 109 (678)
....|+|+|+|-+|.++|..|++.|.+|+|+.|.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3467999999999999999999999999999886
No 489
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=85.24 E-value=0.77 Score=48.17 Aligned_cols=35 Identities=31% Similarity=0.200 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
....|+|+|.|.+|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45689999999999999999999999999999763
No 490
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=85.24 E-value=0.57 Score=46.61 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=28.8
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 79 ~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
+|.|||+|..|..+|..|++ |++|+++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999864
No 491
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=85.22 E-value=1 Score=47.71 Aligned_cols=37 Identities=30% Similarity=0.431 Sum_probs=32.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 74 ~~~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
.+....|+|+|+|..|..++..+.+.|++|.++|..+
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3455789999999999999999999999999998654
No 492
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=85.21 E-value=0.8 Score=46.93 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=30.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
..|.|||+|-.|.++|..|++.|++|+++++.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999998863
No 493
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.21 E-value=0.8 Score=49.31 Aligned_cols=35 Identities=34% Similarity=0.265 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
....|+|||+|.+|..+|..|...|.+|+++|+.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34679999999999999999999999999999763
No 494
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=85.13 E-value=0.77 Score=47.31 Aligned_cols=34 Identities=18% Similarity=0.398 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEeccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~ 110 (678)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4689999999999999999999999 789999864
No 495
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=85.01 E-value=0.87 Score=46.36 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--cEEEEecc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~--~~~~~e~~ 109 (678)
+..+|+|||+|-+|.++|..|+..++ .+.|+|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34789999999999999999999887 78899875
No 496
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.01 E-value=0.69 Score=46.13 Aligned_cols=33 Identities=27% Similarity=0.527 Sum_probs=29.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc--CCcEEEEecc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKD 109 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~--g~~~~~~e~~ 109 (678)
..+|.|||+|-.|..+|..|++. |++|++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 35799999999999999999998 6799999876
No 497
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=85.01 E-value=0.96 Score=45.90 Aligned_cols=36 Identities=31% Similarity=0.457 Sum_probs=31.9
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCcEEEEeccc
Q 005770 75 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (678)
Q Consensus 75 ~~~~~v~ivG~-G~~G~~~a~~l~~~g~~~~~~e~~~ 110 (678)
...+.|+|.|| |-.|..++..|+++|++|+++.|..
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34467999998 9999999999999999999999854
No 498
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=84.80 E-value=0.88 Score=47.35 Aligned_cols=35 Identities=23% Similarity=0.160 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecccc
Q 005770 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (678)
Q Consensus 77 ~~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~ 111 (678)
...++|+|||.+|..+|..++..|++|+++|.++.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 46899999999999999999999999999998764
No 499
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=84.72 E-value=0.61 Score=46.84 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=28.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEeccccc
Q 005770 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (678)
Q Consensus 78 ~~v~ivG~G~~G~~~a~~l~~~g~~~~~~e~~~~~ 112 (678)
.+|-+||-|..|..+|..|.+.|++|+++++.+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 46999999999999999999999999999987543
No 500
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=84.70 E-value=0.68 Score=45.91 Aligned_cols=36 Identities=22% Similarity=0.151 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEecccc
Q 005770 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (678)
Q Consensus 76 ~~~~v~ivG~G~~G~~~a~~l~~~g~-~~~~~e~~~~ 111 (678)
....|+|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 34679999999999999999999999 8999998754
Done!