Query 005774
Match_columns 677
No_of_seqs 501 out of 2215
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 07:07:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtx_A MRNA-capping enzyme; gu 100.0 7.6E-72 2.6E-76 595.8 20.7 323 305-652 7-342 (343)
2 3kyh_C MRNA-capping enzyme sub 100.0 2.3E-70 8E-75 598.5 28.9 332 311-652 14-407 (461)
3 1p16_A GTP--RNA, mRNA capping 100.0 1.3E-61 4.4E-66 529.8 28.2 332 311-656 11-382 (395)
4 1ckm_A MRNA capping enzyme; nu 100.0 7.9E-55 2.7E-59 464.8 26.2 301 305-649 19-328 (330)
5 2c46_A MRNA capping enzyme; ph 100.0 2.7E-37 9.1E-42 316.1 20.6 195 82-279 24-218 (241)
6 1yn9_A BVP, polynucleotide 5'- 100.0 9.8E-33 3.3E-37 267.0 19.4 166 84-256 1-168 (169)
7 1vs0_A Putative DNA ligase-lik 99.9 4.5E-25 1.6E-29 233.6 14.2 163 362-558 23-197 (310)
8 2cfm_A Thermostable DNA ligase 99.9 1.7E-24 5.7E-29 246.2 15.8 167 365-558 243-432 (561)
9 2hiv_A Thermostable DNA ligase 99.9 2.4E-23 8.3E-28 238.9 17.6 168 365-558 274-470 (621)
10 3gde_A DNA ligase; DNA-binding 99.9 2.7E-22 9.2E-27 227.3 14.7 165 364-559 245-433 (558)
11 1fvi_A Chlorella virus DNA lig 99.9 6E-22 2E-26 208.4 13.8 161 363-558 18-196 (297)
12 1x9n_A DNA ligase I; 5'-adenyl 99.9 8.3E-22 2.8E-26 228.1 15.9 175 361-558 327-530 (688)
13 3l2p_A DNA ligase 3; DNA ligas 99.8 8.2E-20 2.8E-24 207.6 24.1 165 364-558 247-440 (579)
14 1a0i_A DNA ligase; DNA replica 99.8 1.4E-20 4.8E-25 202.4 12.7 187 349-559 9-249 (348)
15 3rgo_A Protein-tyrosine phosph 99.8 9E-20 3.1E-24 172.9 16.3 122 139-264 27-152 (157)
16 2oud_A Dual specificity protei 99.8 4.2E-20 1.4E-24 179.9 13.6 132 139-277 32-163 (177)
17 3s4o_A Protein tyrosine phosph 99.8 8.6E-20 3E-24 174.5 15.5 139 102-258 23-165 (167)
18 1ohe_A CDC14B, CDC14B2 phospha 99.8 1.3E-19 4.4E-24 194.5 18.5 147 100-261 182-331 (348)
19 3emu_A Leucine rich repeat and 99.8 5.7E-20 2E-24 176.3 14.1 116 139-263 34-149 (161)
20 3ezz_A Dual specificity protei 99.8 3.1E-20 1.1E-24 174.2 11.0 115 139-262 28-142 (144)
21 3s4e_A Dual specificity protei 99.8 3.4E-20 1.2E-24 174.2 11.0 114 139-261 28-141 (144)
22 1rxd_A Protein tyrosine phosph 99.8 2.5E-19 8.7E-24 169.8 16.5 153 90-263 2-156 (159)
23 2hxp_A Dual specificity protei 99.8 1.2E-19 4E-24 172.9 13.6 117 139-263 30-147 (155)
24 2nt2_A Protein phosphatase sli 99.8 6.7E-20 2.3E-24 172.2 11.8 115 139-262 28-142 (145)
25 1zzw_A Dual specificity protei 99.8 1.5E-19 5.3E-24 170.4 13.6 119 139-264 28-146 (149)
26 3rz2_A Protein tyrosine phosph 99.8 3.7E-19 1.3E-23 174.9 16.4 144 100-264 35-178 (189)
27 2e0t_A Dual specificity phosph 99.8 1.7E-19 5.8E-24 170.5 12.0 120 139-263 26-146 (151)
28 2j16_A SDP-1, tyrosine-protein 99.8 1.5E-19 5.2E-24 176.9 11.5 116 139-263 64-179 (182)
29 4erc_A Dual specificity protei 99.8 1.2E-18 4E-23 164.0 16.4 116 139-262 34-149 (150)
30 3f81_A Dual specificity protei 99.8 2.3E-19 7.8E-24 175.1 11.8 120 139-263 52-176 (183)
31 2hcm_A Dual specificity protei 99.8 3.6E-19 1.2E-23 170.8 12.4 117 139-264 36-152 (164)
32 2img_A Dual specificity protei 99.8 3.2E-18 1.1E-22 160.8 17.4 116 139-262 35-150 (151)
33 2esb_A Dual specificity protei 99.8 8.4E-19 2.9E-23 172.4 12.2 117 139-264 44-160 (188)
34 2g6z_A Dual specificity protei 99.8 7E-19 2.4E-23 176.1 11.5 118 139-265 30-147 (211)
35 3v0d_A Voltage-sensor containi 99.8 2.6E-18 9E-23 183.2 16.6 151 100-262 30-189 (339)
36 1wrm_A Dual specificity phosph 99.8 1.2E-18 4E-23 167.6 12.1 115 139-263 31-145 (165)
37 3n0a_A Tyrosine-protein phosph 99.8 3.2E-18 1.1E-22 183.6 16.4 151 100-263 27-178 (361)
38 2r0b_A Serine/threonine/tyrosi 99.8 7.8E-19 2.7E-23 166.4 10.4 119 139-262 32-151 (154)
39 2y96_A Dual specificity phosph 99.8 1.3E-18 4.3E-23 175.4 11.2 120 139-263 78-200 (219)
40 1yz4_A DUSP15, dual specificit 99.8 2.1E-18 7E-23 164.9 11.9 115 139-263 32-146 (160)
41 2wgp_A Dual specificity protei 99.8 4.6E-18 1.6E-22 167.5 13.2 117 139-264 50-166 (190)
42 2pq5_A Dual specificity protei 99.8 3E-18 1E-22 170.9 11.8 121 139-264 70-193 (205)
43 3cm3_A Late protein H1, dual s 99.7 2E-18 6.7E-23 167.8 9.9 113 139-260 53-172 (176)
44 1d5r_A Phosphoinositide phosph 99.7 3.2E-17 1.1E-21 174.6 17.4 152 100-263 22-177 (324)
45 1fpz_A Cyclin-dependent kinase 99.7 3.7E-17 1.3E-21 163.4 14.4 129 129-264 62-198 (212)
46 2q05_A Late protein H1, dual s 99.7 1.1E-16 3.8E-21 158.2 14.8 116 138-262 69-191 (195)
47 2i6j_A Ssoptp, sulfolobus solf 99.7 7.7E-17 2.6E-21 153.3 9.3 116 139-262 27-150 (161)
48 3vnn_A DNA ligase 4; non-homol 99.7 3.5E-16 1.2E-20 146.4 12.3 101 366-469 1-126 (139)
49 3nme_A Ptpkis1 protein, SEX4 g 99.6 1.8E-15 6.3E-20 158.8 13.9 113 139-256 38-160 (294)
50 1xri_A AT1G05000; structural g 99.5 3.1E-15 1E-19 141.1 4.8 100 139-245 32-135 (151)
51 2f46_A Hypothetical protein; s 99.2 8.5E-11 2.9E-15 111.7 10.6 93 139-242 41-141 (156)
52 3mmj_A MYO-inositol hexaphosph 99.1 1.8E-10 6.1E-15 120.5 12.0 83 156-244 174-257 (314)
53 1fpr_A Protein-tyrosine phosph 99.1 7E-10 2.4E-14 115.7 12.3 141 102-257 77-268 (284)
54 1p15_A Protein-tyrosine phosph 99.0 5.7E-10 2E-14 114.4 10.4 144 102-261 52-241 (253)
55 2hc1_A Receptor-type tyrosine- 99.0 1.6E-09 5.6E-14 113.3 13.4 94 164-258 181-280 (291)
56 3gxh_A Putative phosphatase (D 99.0 1.8E-09 6.3E-14 102.6 11.3 114 132-259 34-151 (157)
57 3b7o_A Tyrosine-protein phosph 99.0 2.8E-09 9.4E-14 112.9 13.3 89 169-258 208-304 (316)
58 1jln_A STEP-like ptpase, prote 99.0 4E-09 1.4E-13 110.7 14.2 141 103-258 102-284 (297)
59 2b49_A Protein tyrosine phosph 99.0 4.4E-09 1.5E-13 109.8 14.1 85 170-258 182-271 (287)
60 3f41_A Phytase; tandem repeat, 99.0 2.5E-09 8.5E-14 120.7 12.5 82 156-243 491-573 (629)
61 2ooq_A Receptor-type tyrosine- 99.0 4.9E-09 1.7E-13 109.5 13.7 140 102-258 90-274 (286)
62 4grz_A Tyrosine-protein phosph 98.9 1.1E-08 3.7E-13 106.9 15.4 141 102-257 79-270 (288)
63 2gjt_A Receptor-type tyrosine- 98.9 7.3E-09 2.5E-13 108.6 14.0 137 103-257 93-277 (295)
64 2cjz_A Human protein tyrosine 98.9 8.6E-09 3E-13 108.5 14.2 141 103-257 110-292 (305)
65 2p6x_A Tyrosine-protein phosph 98.9 9.4E-09 3.2E-13 108.4 14.0 139 103-258 98-285 (309)
66 2i75_A Tyrosine-protein phosph 98.9 1.4E-08 4.6E-13 107.7 15.2 141 103-260 114-301 (320)
67 1zc0_A Tyrosine-protein phosph 98.9 7E-09 2.4E-13 109.4 12.4 140 103-257 113-294 (309)
68 3f41_A Phytase; tandem repeat, 98.9 5.4E-09 1.9E-13 117.9 11.9 81 157-243 194-276 (629)
69 2bzl_A Tyrosine-protein phosph 98.9 1.8E-08 6.1E-13 107.0 14.7 88 171-258 215-314 (325)
70 1yfo_A D1, receptor protein ty 98.8 1.4E-08 4.9E-13 106.7 12.4 139 103-258 99-287 (302)
71 3i36_A Vascular protein tyrosi 98.8 3.2E-08 1.1E-12 105.8 14.5 144 102-260 112-301 (342)
72 1g4w_R Protein tyrosine phosph 98.8 8.2E-09 2.8E-13 112.0 9.9 100 163-262 270-377 (383)
73 2h4v_A Receptor-type tyrosine- 98.8 5.6E-08 1.9E-12 103.0 14.6 86 170-258 218-308 (320)
74 3qwu_A DNA ligase; structural 98.8 4.1E-08 1.4E-12 104.4 13.2 162 343-532 52-222 (370)
75 2cm2_A Tyrosine-protein phosph 98.8 3.5E-08 1.2E-12 103.8 12.1 87 171-258 185-279 (304)
76 2oc3_A Tyrosine-protein phosph 98.7 3.7E-08 1.3E-12 103.6 11.4 85 171-258 199-291 (303)
77 3s3e_A Tyrosine-protein phosph 98.7 9.1E-08 3.1E-12 100.8 14.2 143 102-261 113-300 (307)
78 2jjd_A Receptor-type tyrosine- 98.7 6.7E-08 2.3E-12 110.8 13.4 89 170-260 489-582 (599)
79 1wch_A Protein tyrosine phosph 98.7 5.7E-08 2E-12 102.7 11.4 84 170-258 213-301 (315)
80 4az1_A Tyrosine specific prote 98.7 5.9E-08 2E-12 102.0 11.4 83 171-258 194-283 (302)
81 2i1y_A Receptor-type tyrosine- 98.6 5.9E-08 2E-12 102.0 9.8 85 171-258 197-287 (301)
82 1xk5_A Snurportin-1; protein-R 98.6 8.5E-07 2.9E-11 86.9 17.1 161 364-548 21-183 (204)
83 1lar_A Protein (LAR); tyrosine 98.6 2.1E-07 7E-12 106.3 14.5 141 103-258 376-562 (575)
84 3m4u_A Tyrosine specific prote 98.6 1.2E-07 4E-12 99.9 11.3 87 170-261 196-289 (306)
85 1l8k_A T-cell protein-tyrosine 98.6 1.3E-07 4.3E-12 100.0 11.0 89 171-260 180-273 (314)
86 2vug_A PAB1020; RNA, ligase, A 98.6 4E-07 1.4E-11 98.6 14.9 162 343-532 73-242 (389)
87 3ps5_A Tyrosine-protein phosph 98.6 2.8E-07 9.7E-12 105.6 14.2 88 170-258 416-511 (595)
88 1ywf_A Phosphotyrosine protein 98.6 6.5E-08 2.2E-12 101.4 8.1 112 125-242 56-213 (296)
89 1ygr_A CD45 protein tyrosine p 98.6 2E-07 6.9E-12 107.1 12.6 145 103-261 408-604 (610)
90 1lar_A Protein (LAR); tyrosine 98.6 4E-07 1.4E-11 103.9 14.4 139 103-258 87-271 (575)
91 2jjd_A Receptor-type tyrosine- 98.5 3.7E-07 1.3E-11 104.7 13.1 86 170-258 195-285 (599)
92 1ygr_A CD45 protein tyrosine p 98.5 3.7E-07 1.3E-11 105.0 11.8 140 102-258 97-285 (610)
93 2b3o_A Tyrosine-protein phosph 98.5 4.6E-07 1.6E-11 102.5 12.1 87 170-257 416-510 (532)
94 3gjx_B Snurportin-1; transport 98.5 3.3E-06 1.1E-10 88.3 17.4 161 364-548 122-284 (365)
95 4i8n_A Tyrosine-protein phosph 98.5 5.2E-07 1.8E-11 96.8 10.8 87 171-258 213-307 (354)
96 2shp_A SHP-2, SYP, SHPTP-2; ty 98.4 9.9E-07 3.4E-11 99.6 11.8 87 171-258 423-517 (525)
97 1lyv_A Protein-tyrosine phosph 98.4 1.3E-06 4.4E-11 91.9 11.7 63 201-263 234-300 (306)
98 4ge6_A Tyrosine-protein phosph 98.4 1.2E-06 4.1E-11 92.5 11.0 141 103-257 96-294 (314)
99 2nlk_A Protein tyrosine phosph 98.3 2.6E-06 9E-11 98.1 13.6 86 170-258 200-290 (627)
100 2nlk_A Protein tyrosine phosph 98.0 7.8E-06 2.7E-10 94.2 9.5 87 171-262 494-585 (627)
101 1ohe_A CDC14B, CDC14B2 phospha 96.9 0.0019 6.6E-08 68.8 9.1 69 172-242 49-121 (348)
102 1s68_A RNA ligase 2; ribonucle 96.2 0.021 7.1E-07 58.0 10.8 109 360-468 24-145 (249)
103 2hvq_A ORF1, hypothetical 37.6 95.7 0.052 1.8E-06 57.5 11.3 110 360-469 25-147 (335)
104 1ta8_A DNA ligase, NAD-depende 95.0 0.27 9.3E-06 51.7 13.7 159 365-550 114-318 (332)
105 1b04_A Protein (DNA ligase); D 94.4 0.38 1.3E-05 50.3 13.0 159 365-550 108-312 (318)
106 4glx_A DNA ligase; inhibitor, 93.2 2.2 7.5E-05 48.2 17.4 163 364-554 108-321 (586)
107 4glw_A DNA ligase; inhibitor, 92.8 1.7 5.8E-05 45.1 14.7 151 365-549 103-304 (305)
108 3jsl_A DNA ligase; NAD+-depend 91.5 2.4 8.3E-05 44.2 13.9 154 365-550 106-310 (318)
109 3uq8_A DNA ligase; adenylated 89.9 3.6 0.00012 43.0 13.5 158 365-550 108-316 (322)
110 1xdn_A RNA editing ligase MP52 84.4 5.1 0.00018 40.7 10.4 107 361-467 30-189 (277)
111 1vee_A Proline-rich protein fa 82.3 3.1 0.00011 37.2 7.3 86 124-229 6-99 (134)
112 1zau_A DNA ligase; AMP; HET: D 81.0 0.32 1.1E-05 51.0 0.1 146 364-535 116-306 (328)
113 2owo_A DNA ligase; protein-DNA 80.1 55 0.0019 37.5 18.1 160 365-553 109-320 (671)
114 3sgi_A DNA ligase; HET: DNA AM 76.6 17 0.00057 41.2 12.3 160 365-553 117-330 (615)
115 1dgs_A DNA ligase; AMP complex 70.8 60 0.0021 37.1 15.1 161 365-553 110-318 (667)
116 2yf0_A Myotubularin-related pr 61.3 9.6 0.00033 42.3 6.0 26 199-224 327-352 (512)
117 1zsq_A Myotubularin-related pr 57.6 14 0.00047 41.2 6.4 25 200-224 340-364 (528)
118 2c5u_A RNA ligase, T4 RNA liga 53.0 25 0.00086 37.4 7.4 101 363-466 92-201 (375)
119 1lw3_A Myotubularin-related pr 52.7 18 0.00061 41.2 6.4 25 200-224 412-436 (657)
120 3iwh_A Rhodanese-like domain p 51.0 14 0.00047 31.5 4.1 29 199-230 54-82 (103)
121 3i2v_A Adenylyltransferase and 49.8 15 0.00053 31.7 4.3 23 202-226 73-95 (127)
122 3foj_A Uncharacterized protein 43.9 17 0.00058 30.3 3.5 28 199-229 54-81 (100)
123 2hhg_A Hypothetical protein RP 43.6 15 0.00052 32.5 3.3 28 199-229 84-111 (139)
124 3hzu_A Thiosulfate sulfurtrans 42.0 51 0.0017 33.8 7.5 91 125-230 42-138 (318)
125 3gk5_A Uncharacterized rhodane 40.1 19 0.00066 30.5 3.3 28 199-229 53-80 (108)
126 2fsx_A RV0390, COG0607: rhodan 39.9 21 0.00073 32.1 3.8 89 126-229 8-105 (148)
127 3eme_A Rhodanese-like domain p 39.3 27 0.00092 29.1 4.1 28 199-229 54-81 (103)
128 4f67_A UPF0176 protein LPG2838 38.8 39 0.0013 34.1 5.8 86 122-229 121-206 (265)
129 1qxn_A SUD, sulfide dehydrogen 38.3 22 0.00076 31.7 3.5 79 125-229 25-107 (137)
130 3flh_A Uncharacterized protein 36.6 26 0.00089 30.5 3.7 81 125-229 17-98 (124)
131 2jtq_A Phage shock protein E; 34.4 73 0.0025 25.3 5.9 28 199-229 39-66 (85)
132 1uas_A Alpha-galactosidase; TI 33.3 48 0.0016 34.7 5.7 82 126-214 75-168 (362)
133 1e0c_A Rhodanese, sulfurtransf 29.6 42 0.0014 33.2 4.3 29 199-230 221-249 (271)
134 3ilm_A ALR3790 protein; rhodan 29.5 46 0.0016 29.7 4.2 79 126-229 3-81 (141)
135 1gmx_A GLPE protein; transfera 28.0 89 0.003 26.0 5.6 76 126-229 8-83 (108)
136 3hix_A ALR3790 protein; rhodan 27.2 54 0.0019 27.5 4.0 29 199-230 50-78 (106)
137 1whb_A KIAA0055; deubiqutinati 26.5 89 0.003 28.2 5.6 86 121-214 13-100 (157)
138 2k0z_A Uncharacterized protein 26.3 63 0.0022 27.2 4.3 28 199-229 54-81 (110)
139 2gwf_A Ubiquitin carboxyl-term 26.2 1.3E+02 0.0046 27.1 6.8 84 124-215 21-106 (157)
140 3hg3_A Alpha-galactosidase A; 25.5 1.4E+02 0.0047 32.0 7.6 79 127-211 86-174 (404)
141 3g5j_A Putative ATP/GTP bindin 24.8 89 0.003 26.7 5.1 27 200-229 87-115 (134)
142 3f4a_A Uncharacterized protein 22.2 57 0.0019 30.2 3.4 23 202-225 105-127 (169)
143 3d1p_A Putative thiosulfate su 21.3 87 0.003 27.4 4.4 90 124-230 24-117 (139)
144 3a21_A Putative secreted alpha 20.4 55 0.0019 37.0 3.4 89 123-214 73-186 (614)
145 1uar_A Rhodanese; sulfurtransf 20.2 82 0.0028 31.3 4.4 28 199-229 231-259 (285)
No 1
>3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A
Probab=100.00 E-value=7.6e-72 Score=595.81 Aligned_cols=323 Identities=37% Similarity=0.606 Sum_probs=220.8
Q ss_pred ccccCCCCCCCccCh--hHHHHHHHHHHHhhhcccCCCCCCCCCCCcccccchhchhhhccCCeEEEEcccceEEEEEEE
Q 005774 305 VTMTNDDVLGDEIPN--DQQDAFRHFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT 382 (677)
Q Consensus 305 ~~~~~~~~~g~~~~~--~~~~~~r~~~~~~~~~~~~~~~~~~FPGsqPVsl~r~nl~~l~~~~Y~V~eK~DG~R~ll~i~ 382 (677)
++|++.+|.|+++.+ +.+..||++|++||+|+ ..+|||||||||+|+||+.|.+++|+|||||||+|+||++.
T Consensus 7 ~f~~~~~v~gv~~v~~~~~~~~l~~~v~~~~~~~-----~~~FPGsqPVS~~r~nl~~L~~~~y~v~~K~DG~R~ll~i~ 81 (343)
T 3rtx_A 7 IFLEGITVKGVTQVTTQPKLGEVQQKCHQFCGWE-----GSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRYMMLID 81 (343)
T ss_dssp CSSSSSCCTTEEECCCTTHHHHHHHHHHHHTTCC-----SSSCCSEEEEECCTTGGGHHHHSCEEEEEECCCEEEEEEEC
T ss_pred eecCCcccCCeEEeCChHHHHHHHHHHHHHhCCC-----CCCCCCceeeccchhhHHhhccCCEEEEECCCceEEEEEEE
Confidence 689999999998754 57889999999999764 47899999999999999999999999999999999999999
Q ss_pred -CCEEEEEeCCCccccc-cCcCCCcCCCCcccccCCCCeeeeEEEEEecCCCCCCceeEEEEeEEeecCCccccCCCHHH
Q 005774 383 -IDGCYLIDRCFNFRRV-QMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYE 460 (677)
Q Consensus 383 -~~~vyLidR~~~~~~v-~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~e 460 (677)
++++||+||++.++.+ +.+||+..+.. ..+.+||||||||+++..+. ..++|+|||+|+++|++++++||.+
T Consensus 82 ~~~~v~L~sR~~~~~~~~~~~FP~~~~~~----~~~~~tvLDGElV~~~~~g~--~~~~~~~FDlL~~~G~dl~~~pl~e 155 (343)
T 3rtx_A 82 GTNEVFMIDRDNSVFHVSNLEFPFRKDLR----MHLSNTLLDGEMIIDKVNGQ--AVPRYLIYDIIKFNAQPVGDCDFNI 155 (343)
T ss_dssp STTCEEEECTTCCEEEETTCCCEETTEEE----EECCSEEEEEEEEEEESSSS--EEEEEEEEEEEEBTTBCGGGSCHHH
T ss_pred cCCEEEEEeCCCCeEEeccccCCcchhhh----ccCCCeEEEEEEEEecCCCc--EeeEEEEEEEEeECCcCcccCCHHH
Confidence 7899999999987655 58899875431 23678999999999865432 4689999999999999999999999
Q ss_pred HHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHH-HHhcccccCCCceEEEEeCCCCCccCC
Q 005774 461 RWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLL-KEFIPKLSHDADGLVFQGWDDPYVPRT 539 (677)
Q Consensus 461 R~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll-~~~~~~l~h~~DGLIf~p~~spY~~G~ 539 (677)
|+++|++.|++|+...++ ++.+....+||.|+.|+||++++++++| .+|++++.|++|||||||.+ ||++|+
T Consensus 156 R~~~L~~~i~~p~~~~~~------~~~~~~~~~pf~vr~K~~~~~~~~~~ll~~~~~~~l~~~~dGlIf~~~~-~Y~~G~ 228 (343)
T 3rtx_A 156 RLQCIEREIISPRHEKMK------TGLIDKTQEPFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIG-KYKPGR 228 (343)
T ss_dssp HHHHHHHHTHHHHHHHHH------HSSCCTTTSSSEEEECCCEEGGGHHHHSCC----------CEEEEEESS-CCCCEE
T ss_pred HHHHHHHHhhhHHHHHhh------cccccccCCCcEEEEEEeEehhhHHHHHhhhhHhhcCCCCCeEEEEECc-cCcCCC
Confidence 999999999999865442 2233456789999999999999999998 46889999999999999999 999999
Q ss_pred CCCeEEEccCCCceEEEEEEEecCC-c-------eeEEEEeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeE
Q 005774 540 HEGLLKWKYARMNSVDFLFEVTDDD-R-------QLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWK 611 (677)
Q Consensus 540 ~~~lLKWKp~~~nTVDF~l~~~~~~-~-------~~L~~~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEC~~d~~~~~W~ 611 (677)
+..||||||+++|||||+|++.... . +.||+ +|...+|+. +..+ ++++++||+||||+|| +|+|+
T Consensus 229 ~~~~lKwKp~~~~tvDF~l~~~~~~~~g~~~~~~~~l~~--~g~~~~f~~--~~~t-~~l~~ld~~IvEC~~~--~~~W~ 301 (343)
T 3rtx_A 229 CDDILKWKPPSLNSVDFRLKITRMGGEGLLPQNVGLLYV--GGYERPFAQ--IKVT-KELKQYDNKIIECKFE--NNSWV 301 (343)
T ss_dssp EEEEEEECCSTTCC------------------------------------------------------------------
T ss_pred CcceEEEecCcceEEEEEEEecccCCCCccccccceEEE--CCeeeecce--eecc-ccchhcCCEEEEEEEE--CCEEE
Confidence 9999999999999999999887431 1 13344 344444332 2221 5567899999999998 68999
Q ss_pred EEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHHh
Q 005774 612 CMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEII 652 (677)
Q Consensus 612 ~~R~R~DK~~pN~~~tv~~v~~SI~~~Vt~e~L~~~i~~i~ 652 (677)
|||+|+||++||+++||.+||+||.++||+|+|+++|++.+
T Consensus 302 ~~R~R~DK~~pN~~~tv~~v~~SI~d~Vt~e~L~~~i~~~~ 342 (343)
T 3rtx_A 302 FMRQRIDKSFPNAYNTAMAVCNSISNPVTKEMLFEFIDRCA 342 (343)
T ss_dssp ------------CHHHHHHHHHHHHSCCCHHHHHHHHHHHC
T ss_pred EEEEcCCCCCCchHHHHHHHHHHHHccCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998753
No 2
>3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-70 Score=598.52 Aligned_cols=332 Identities=32% Similarity=0.509 Sum_probs=276.2
Q ss_pred CCCCCccChhHHHHHHHHHHHhhhcccCCCCCCCCCCCcccccchhch-hhhccCCeEEEEcccceEEEEEEEC------
Q 005774 311 DVLGDEIPNDQQDAFRHFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNL-QLLRQRYYYATWKADGTRYMMLITI------ 383 (677)
Q Consensus 311 ~~~g~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~FPGsqPVsl~r~nl-~~l~~~~Y~V~eK~DG~R~ll~i~~------ 383 (677)
++||+.++++++..||+.|+.||+++ ..+.+|||||||||+|+|| ..|..++|+|||||||+||||++..
T Consensus 14 ~~pG~~~~~~~~~~lr~~v~~l~~~~---~~~~~FPGsqPVS~~r~nl~~~L~~~dY~V~eK~DGiR~Ll~i~~~~~~g~ 90 (461)
T 3kyh_C 14 EIPGLIQPGNVTQDLKMMVCKLLNSP---KPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGE 90 (461)
T ss_dssp CCSSCBCCSHHHHHHHHHHHHHTTSC---GGGSSCSSCEEEECCHHHHHHTTSSSCEEEEEEECSEEEEEEEEECTTTCC
T ss_pred CCCCcccCHHHHHHHHHHHHHHHCCC---CCCCcCCCCcceeecHhhHHHHhccCCEEEEEcccceEEEEEEeccccCCC
Confidence 46899999999999999999999763 2235999999999999999 6799999999999999999999982
Q ss_pred CEEEEEeCCCcccccc-CcCCCcCCC--CcccccCCCCeeeeEEEEEecCCCCCCceeEEEEeEEeecCCccccCCCHHH
Q 005774 384 DGCYLIDRCFNFRRVQ-MRFPCRNSN--EGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYE 460 (677)
Q Consensus 384 ~~vyLidR~~~~~~v~-~~FP~~~~~--~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~e 460 (677)
++|||+||+++++.++ ++||...+. .++....+.+||||||||+++.+.+++..++|+|||||+++|++++++||.+
T Consensus 91 g~v~LidR~~~~~~v~~~~FP~~~~~~~~~~l~~~~~~TlLDGElV~d~~~~~~~~~~~y~~FDlL~~~G~dl~~~pl~e 170 (461)
T 3kyh_C 91 QGCFMIDRENNYYLVNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSS 170 (461)
T ss_dssp EEEEEECSSSCEEEECCCCCCCCSSCCSSGGGTCCCCSEEEEEEEEEEECTTTCCEEEEEEEEEEEEETTEECSSSBHHH
T ss_pred ceEEEEeCCCCeEEcccccCCcccccchhhhhhccCCCeEEEEEEEeccCCCCCccceEEEEEEEEeECCcCcccCCHHH
Confidence 5899999999988765 899987552 1222345789999999999876533346799999999999999999999999
Q ss_pred HHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHHHHhcccccCCCceEEEEeCCCCCcc-CC
Q 005774 461 RWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVP-RT 539 (677)
Q Consensus 461 R~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~-G~ 539 (677)
|+++|++.|+.|+...++ .+| +....+||.|+.|+|+.++.++++|+ +++++.|++||||||+.++||.+ ||
T Consensus 171 R~~~Le~~I~~P~~~~~~-----~~p-~~~~~~pF~V~~K~~~~~~~~~~l~~-~~~~l~~~~EGLv~k~~~spY~~Ggr 243 (461)
T 3kyh_C 171 RLAHLGKEFFKPYFDLRA-----AYP-NRCTTFPFKISMKHMDFSYQLVKVAK-SLDKLPHLSDGLIFTPVKAPYTAGGK 243 (461)
T ss_dssp HHHHHHHTTHHHHHHHHH-----HCS-TTCSCCCSEEEECCCEEGGGHHHHHH-HHTTCSSCEEEEEEEESSSBCCSSSE
T ss_pred HHHHHHHHhcccchhhhh-----ccc-cccccCCcEEEeccchhhhhHHHHHH-hhhhccCCCCeEEEEeCCCCCcCCCc
Confidence 999999998887654431 223 23467899999999999999999998 77899999999999999999999 68
Q ss_pred CCCeEEEccCCCceEEEEEEEecC----------------------CceeEEEEeCCee---------ee--------ec
Q 005774 540 HEGLLKWKYARMNSVDFLFEVTDD----------------------DRQLLYVFERGKK---------KL--------ME 580 (677)
Q Consensus 540 ~~~lLKWKp~~~nTVDF~l~~~~~----------------------~~~~L~~~~~g~~---------~~--------~~ 580 (677)
+..||||||+++|||||+|++... ..+.|||+.+|.. .+ ++
T Consensus 244 ~~~~lKwKp~~~nTVDF~L~i~~~~~~~~~~~~~~~~~~y~dy~~~p~~~L~v~~gg~~~~~~~~~~~~~f~~~~~~~l~ 323 (461)
T 3kyh_C 244 DSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILE 323 (461)
T ss_dssp EEEEEECCCTTTCCCEEEEECCCC------------------CCSCCCCEEEEECTTCHHHHHHHHTTCSCTTTTHHHHT
T ss_pred CCCeEEEEcCCCeeEEEEEEecccccCCCcccccccccccccccccceeEEEEEeCCcccccccccccccccchhhhccc
Confidence 999999999999999999988630 0357888877621 11 11
Q ss_pred Cce-----eEecCC-------CCCCCCceEEEEEEeCCCCeeEEEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHHH
Q 005774 581 GSS-----VEFTDR-------EPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEI 648 (677)
Q Consensus 581 ~~~-----~~f~~~-------~~~~~dg~IvEC~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~~~Vt~e~L~~~i 648 (677)
... +.+++. ...++||+||||+||+++|+|+|||+|+||++||+++||.+||+||.++||+|+|+.+|
T Consensus 324 ~~~~~f~~l~~t~~ew~~lk~~~~~ld~~IvEC~~d~~~~~W~~~R~R~DK~~pN~~~tv~~vleSI~d~Vt~e~L~~~~ 403 (461)
T 3kyh_C 324 RTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIV 403 (461)
T ss_dssp TTEEEEEECCCCTTTHHHHHHSCCCCTTEEEEECCCTTTSSCCEEEECTTSSSCCCHHHHHHHHHHHHHCCCSHHHHTTT
T ss_pred ccceecceeeecHHHHHHHhhccCCCCCEEEEEEEeCCCCeEEEEEECCCCCCCCchHHHHHHHHHHhccCCHHHHHHHH
Confidence 111 222222 23569999999999998999999999999999999999999999999999999999877
Q ss_pred HHHh
Q 005774 649 QEII 652 (677)
Q Consensus 649 ~~i~ 652 (677)
.+|+
T Consensus 404 ~~i~ 407 (461)
T 3kyh_C 404 GDIK 407 (461)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 3
>1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3
Probab=100.00 E-value=1.3e-61 Score=529.82 Aligned_cols=332 Identities=29% Similarity=0.488 Sum_probs=270.5
Q ss_pred CCCCCccChhHHHHHHHHHHHhhhcccCCCCCCCCCCCcccccchhch-hhhccCCeEEEEcccceEEEEEE-----ECC
Q 005774 311 DVLGDEIPNDQQDAFRHFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNL-QLLRQRYYYATWKADGTRYMMLI-----TID 384 (677)
Q Consensus 311 ~~~g~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~FPGsqPVsl~r~nl-~~l~~~~Y~V~eK~DG~R~ll~i-----~~~ 384 (677)
+|+|++++++++..||+.|+++|++ +..+|||+|||||+++|+ ..|...+|+||||+||+|+||++ .++
T Consensus 11 ~i~g~~~~~~~~~~l~~~v~~l~~~-----~~~~FPg~~Pvsl~~~~l~~~l~~~~~~ve~K~DG~R~ll~~~~~~~~g~ 85 (395)
T 1p16_A 11 VIPGNKLDEEETKELRLMVAELLGR-----RNTGFPGSQPVSFERRHLEETLMQKDYFVCEKTDGLRCLLFLINDPDKGE 85 (395)
T ss_dssp CCSSEECCHHHHHHHHHHHHHHHTC-----SCCSCCCEEEEECCHHHHHTHHHHSCEEEEEEECSEEEEEEEEEETTTEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHCC-----CCCCCCCCceecccHHHHHHhhCcCCEEEEECccceEEEEEEeecccCCC
Confidence 4689999999999999999999975 358999999999999999 78888899999999999999999 346
Q ss_pred EEEEEeCCCcccccc-CcCCCcCCCCcccccCCCCeeeeEEEEEecCCCCCCceeEEEEeEEeecCCccccCCCHHHHHH
Q 005774 385 GCYLIDRCFNFRRVQ-MRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWK 463 (677)
Q Consensus 385 ~vyLidR~~~~~~v~-~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~ 463 (677)
++||++|+++++.++ .+||.......-....+.+|+||||||++..++. +..++|+|||||+++|++++++||.+|++
T Consensus 86 ~v~L~sR~~~~~~i~~~~FP~~~~~~~~~~~~~~~~vLDGElV~~~~~~~-~~~~~f~~FDlL~~~G~dl~~~pl~eR~~ 164 (395)
T 1p16_A 86 GVFLVTRENDYYFIPNIHFPLSVNETREKPTYHHGTLLDGELVLENRNVS-EPVLRYVIFDALAIHGKCIIDRPLPKRLG 164 (395)
T ss_dssp EEEEEETTCCEEECCSCCCCSCTTCCSSSCCCCSSEEEEEEEEEECCSSS-CCEEEEEEEEEEEETTEECTTSCHHHHHH
T ss_pred EEEEEeCCCceEEeccccCCcccccccchhccCCcceeeeEEEEeccCCC-cceeEEEEEEEEEECCeEcccCCHHHHHH
Confidence 899999999977665 7899865431000123678999999999876432 25789999999999999999999999999
Q ss_pred HHHHHhcCccchhcccccccCCC-CccCCCCCcEEEecceEEchhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCC
Q 005774 464 MLEKEVIEPRNYERHNIYQSRNP-YYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEG 542 (677)
Q Consensus 464 ~L~~~i~~pr~~~~~~i~~~~~p-~~~~~~~pf~i~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~~ 542 (677)
+|++.|+.|+...++ .+| ......+||.|+.|+++++++++++|+. ++.+.|++||||||+.++||.+|++..
T Consensus 165 ~L~~~i~~~~~~~~~-----~~~~~~~~~~~pf~v~~~~~~~~~~~~~~~~~-~~~~~~g~EGlI~K~~ds~Y~~Gr~~~ 238 (395)
T 1p16_A 165 YITENVMKPFDNFKK-----HNPDIVNSPEFPFKVGFKTMLTSYHADDVLSK-MDKLFHASDGLIYTCAETPYVFGTDQT 238 (395)
T ss_dssp HHHHHTHHHHHHHHH-----HCHHHHSCTTSCCEEEECCCEEGGGTHHHHTT-GGGCSSCEEEEEEEESSSCCCSEEEEE
T ss_pred HHHHHhhcccHhhhh-----cCccccccccCceEEEEecchhHHHHHHHHHH-HHhcCCCCCeEEEEeCCCCcCCCCccc
Confidence 999988776543220 011 0123467999999999999998988865 477899999999999999999999999
Q ss_pred eEEEccCCCceEEEEEEEec----------CCc-------------eeEEEEeCCee-eeecCceeEecCC-------CC
Q 005774 543 LLKWKYARMNSVDFLFEVTD----------DDR-------------QLLYVFERGKK-KLMEGSSVEFTDR-------EP 591 (677)
Q Consensus 543 lLKWKp~~~nTVDF~l~~~~----------~~~-------------~~L~~~~~g~~-~~~~~~~~~f~~~-------~~ 591 (677)
||||||++.|||||+|.+.. .++ ..|+++.+|+. .+|. .+.|+++ ..
T Consensus 239 wlKwK~~~~~TvDfvl~~~~~~~~~~~~~g~G~~~~~~dy~~~p~~~~l~v~~~~~~~~~f~--~~~ltd~e~~~l~~~~ 316 (395)
T 1p16_A 239 LLKWKPAEENTVDFQLEFVFNEVQDPDLDERDPTSTYLDYDAKPNLIKLRVWQGSNVHTDFA--KLDLSDDDWERLKALE 316 (395)
T ss_dssp EEEECCGGGCCEEEEEEEECEEEECTTSCTTSTTCEEEECSSCCSEEEEEEECSTTCEEEEE--EECCCHHHHHHHHHSS
T ss_pred eEEEecCCCeEEEEEEEEEecccccccccccCccccccccccccceeEEEEEeCCcccceee--EEEeCHHHHHHhHhhc
Confidence 99999999999999998541 111 34667776633 2332 2334331 24
Q ss_pred CCCCceEEEEEEe-CCCCeeEEEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHHhcCcc
Q 005774 592 SFYSGKIIECTWD-PDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEIIRLPM 656 (677)
Q Consensus 592 ~~~dg~IvEC~~d-~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~~~Vt~e~L~~~i~~i~~~p~ 656 (677)
..++|+||||.|+ +++|.|+|+|+|+||+.||+++||.+||+||.++||+|+|++++++|..-..
T Consensus 317 ~~~~~~IvEc~~~~~~~g~wr~~R~R~DK~~pN~~~t~~~vl~si~~~vt~eeL~~~~~~~~~~w~ 382 (395)
T 1p16_A 317 QPLQGRIAECRQSTTKKGYWEMLRFRNDKSNGNHISVVEKILVSIKDGVKEKEVIEWCPKISRAWK 382 (395)
T ss_dssp SCCTTCEEEEEECSSSTTEEEEEEECTTCSSCCBHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEEeecCCCCccEEEEEeCCCCCcChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 6689999999998 5689999999999999999999999999999999999999999998754443
No 4
>1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B*
Probab=100.00 E-value=7.9e-55 Score=464.80 Aligned_cols=301 Identities=23% Similarity=0.384 Sum_probs=238.8
Q ss_pred ccccCCCCCCCcc-ChhHHHHHHHHHHH--hhhcccCCCCCCCCCCCcccccchhchhhhccCCeEEEEcccceEEEEEE
Q 005774 305 VTMTNDDVLGDEI-PNDQQDAFRHFCYQ--TLKLNFGGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLI 381 (677)
Q Consensus 305 ~~~~~~~~~g~~~-~~~~~~~~r~~~~~--~~~~~~~~~~~~~FPGsqPVsl~r~nl~~l~~~~Y~V~eK~DG~R~ll~i 381 (677)
.+|.+. ++|+.. +.+....+.+.+.. +|++ ...+|||+|||||+++|++.|...+|+||||+||+|++|++
T Consensus 19 ~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Fpg~~Pv~~~~~~~~~L~~~~y~ve~K~DG~R~ll~~ 92 (330)
T 1ckm_A 19 LTLNGL-QIKLHKVVGESRDDIVAKMKDLAMDDH-----KFPRLPGPNPVSIERKDFEKLKQNKYVVSEKTDGIRFMMFF 92 (330)
T ss_dssp EEETTE-EEEEEEECHHHHHHHHHHHHHHTTCCC-----SSCCCSSEEEEECCGGGHHHHHHSCEEEEEEECSEEEEEEE
T ss_pred cccCCc-ccccccCCchhhHHHHHHHHHhhhcCC-----CCCCCCCCceeCcchHHHhhCCcCCEEEEECcceEEEEEEE
Confidence 344443 455543 33333333333332 4654 45899999999999999999988899999999999999999
Q ss_pred E---C-CEEEEEeCCCccccccCcCCCcCCCCcccccCCCCeeeeEEEEEecCCCCCCceeEEEEeEEeecCCccccCCC
Q 005774 382 T---I-DGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERP 457 (677)
Q Consensus 382 ~---~-~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~p 457 (677)
+ + +.+||++|+++++ +..||.... ..+.+|+||||||++..+ ..++|+|||||+++|++++++|
T Consensus 93 ~~~~g~g~v~L~sR~~~~~--t~~fp~~~~------~~~~~~vLDGElv~~~~~----~~~~f~vFDlL~~~G~dl~~~p 160 (330)
T 1ckm_A 93 TRVFGFKVCTIIDRAMTVY--LLPFKNIPR------VLFQGSIFDGELCVDIVE----KKFAFVLFDAVVVSGVTVSQMD 160 (330)
T ss_dssp EEETTEEEEEEECTTCCEE--ECCCSCCCT------TGGGCEEEEEEEEEETTT----TEEEEEEEEEEEETTEECTTSC
T ss_pred EecCCCCEEEEEeCCCCEE--eccChhhhh------ccCCCeeEEEEEEEEcCC----CeEEEEEEeeeeeCCcccccCC
Confidence 9 4 6799999999854 345775421 235799999999998643 2489999999999999999999
Q ss_pred HHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHHHHhcccccC--CCceEEEEeCCCCC
Q 005774 458 FYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSH--DADGLVFQGWDDPY 535 (677)
Q Consensus 458 f~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~~~~l~h--~~DGLIf~p~~spY 535 (677)
|.+|+++|++.+..+. .....||.|+.++++++ .++++|+++.+.+.| ++||||||+.++||
T Consensus 161 l~eRr~~L~~~l~~~~---------------~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~yg~EGlI~K~~dspY 224 (330)
T 1ckm_A 161 LASRFFAMKRSLKEFK---------------NVPEDPAILRYKEWIPL-EHPTIIKDHLKKANAIYHTDGLIIMSVDEPV 224 (330)
T ss_dssp HHHHHHHHHHHHTTCC---------------CCTTSSSEEEECCCEET-TCHHHHHHHHHHHHHHSCEEEEEEEESSSCC
T ss_pred HHHHHHHHHHHHhhhc---------------ccCCCCeEEEEEEEEeh-hHHHHHHHHHHHHhccCCCceEEEeeCCCcc
Confidence 9999999999773211 01245788999999999 889999878888999 99999999999999
Q ss_pred ccCCCCCeEEEccCCCceEEEEEEEecCCceeEEEEeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEE
Q 005774 536 VPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRI 615 (677)
Q Consensus 536 ~~G~~~~lLKWKp~~~nTVDF~l~~~~~~~~~L~~~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEC~~d~~~~~W~~~R~ 615 (677)
.+|++..||||||++.+|+||+|. .+.++..||++..|...++. ......++|+||||.|+ +|.|+|+|+
T Consensus 225 ~~Gr~~~~lKwK~~~~~tvDfvi~-~g~g~~gl~~~~~~~~vp~~-------~~~k~~~~g~IvE~~~~--~G~wr~~R~ 294 (330)
T 1ckm_A 225 IYGRNFNLFKLKPGTHHTIDFIIM-SEDGTIGIFDPNLRKNVPVG-------KLDGYYNKGSIVECGFA--DGTWKYIQG 294 (330)
T ss_dssp CCEEEEEEEEECSTTCCCEEEEEC-STTCCEEEEETTTTEEEECC-------CCSSCCCTTCEEEEEEE--TTEEEEEEE
T ss_pred cCCCccCeEEEEeCCCceEEEEEE-ccCCeEEEEeCCCCceeeee-------eeehhhcCCeEEEEEEE--CCceEEEEE
Confidence 999999999999999999999996 33444455554333333332 21112289999999998 689999999
Q ss_pred ecCCCCCChHHHHHHHHHhcccCCCHHHHHHHHH
Q 005774 616 RTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQ 649 (677)
Q Consensus 616 R~DK~~pN~~~tv~~v~~SI~~~Vt~e~L~~~i~ 649 (677)
|+||+.||+++|+.+|++||.++||+|+|+.+|+
T Consensus 295 R~DK~~~n~~~t~~~v~~si~~~vt~eeL~~~~~ 328 (330)
T 1ckm_A 295 RSDKNQANDRLTYEKTLLNIEENITIDELLDLFK 328 (330)
T ss_dssp CTTCSSCCBHHHHHHHHHHHHHCCCHHHHTTCC-
T ss_pred eCCCCCCCHHHHHHHHHHhhhcCCCHHHHHHhhc
Confidence 9999999999999999999999999999987654
No 5
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=100.00 E-value=2.7e-37 Score=316.13 Aligned_cols=195 Identities=38% Similarity=0.762 Sum_probs=177.3
Q ss_pred CCCCCCCCCccCCCCCCcccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhh
Q 005774 82 DRNKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKK 161 (677)
Q Consensus 82 ~~~~lp~~W~~~~~~g~~I~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~ 161 (677)
..+.+|.+|+.||++|+.|+++|||||+|+++.++..++.++||+++++++.++..+.+|++||||+++.++|+++.+++
T Consensus 24 ~~~~~p~~Wl~~p~~g~~I~~rfia~~~P~~~~~~~~v~~~~r~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~ 103 (241)
T 2c46_A 24 AHNKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEK 103 (241)
T ss_dssp TTCCCCTTCTTSCSBCCCBTTTEEEECCCCCGGGGGGSCGGGCCCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHT
T ss_pred cCCCCChhhhcCCCCCCEeCCcEEEecCCcccchhhhccHhhcCCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHH
Confidence 56799999999999999999999999999999999999999999999999999988889999999999888999999999
Q ss_pred CCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhc
Q 005774 162 EGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV 241 (677)
Q Consensus 162 ~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~ 241 (677)
.||+|+++|+.|++.+|+.+.+..|++.+.+++++ .++++|+|||++|+||||++||||||++.+|++++|++.|+++
T Consensus 104 ~gi~y~~~p~~D~~~~P~~~~l~~~~~~i~~~~~~--~~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~s~~eAi~~vr~~ 181 (241)
T 2c46_A 104 EGIKYIKLQCKGHGECPTTENTETFIRLCERFNER--NPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQA 181 (241)
T ss_dssp TTCEEEECCCCCTTCCCCHHHHHHHHHHHTTC-------CEEEEEECSSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCCChHHHHHHHHHHHHHHHh--CCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 99999999999876799999999999998888763 3578999999999999999999999999999999999999999
Q ss_pred CCCCcCCHHHHHHHHHHHhhcCCCCCCCCCCCcccccc
Q 005774 242 RPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKREL 279 (677)
Q Consensus 242 Rp~~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~~~ 279 (677)
||.++++.+|+++|+++|.+... ...+|+.|+|+.+.
T Consensus 182 R~~~i~~~~~l~~L~~~~~~~~~-~~~~~~~p~W~~~~ 218 (241)
T 2c46_A 182 RPPGIYKGDYLKELFRRYGDIEE-APPPPLLPDWCFED 218 (241)
T ss_dssp STTCCCCHHHHHHHHHHHSCGGG-CCCCCCCCTTCCCC
T ss_pred CCCCCCCHHHHHHHHHHHhhccc-CCCCCCccchhccC
Confidence 99999999999999999987543 46789999998744
No 6
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=100.00 E-value=9.8e-33 Score=267.01 Aligned_cols=166 Identities=31% Similarity=0.572 Sum_probs=152.4
Q ss_pred CCCCCCCccCCCCCCcccC-ceeecCCCCccccccCCCC-CCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhh
Q 005774 84 NKLPPGWLDCPPFGQEIGG-CIIPSKVPLSEFFNDCIPP-GKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKK 161 (677)
Q Consensus 84 ~~lp~~W~~~~~~g~~I~~-~fip~k~Pl~~~~~~~i~~-~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~ 161 (677)
+++|++|++|+++|++|++ +||||++|+++.+...+.. ..+|++.++++. ..+|++||||+++.+.|+++.+..
T Consensus 1 ~~~p~~w~~~~~~g~~i~~~~~i~~~~P~~~~~~~~~~~~~~~~~~~~ll~~----~~gi~~Vi~l~~~~~~~~~~~~~~ 76 (169)
T 1yn9_A 1 HMFPARWHNYLQCGQVIKDSNLICFKTPLRPELFAYVTSEEDVWTAEQIVKQ----NPSIGAIIDLTNTSKYYDGVHFLR 76 (169)
T ss_dssp -CCCTTGGGSCSBCCCCTTSSEEEECCCCCGGGGTTBCCGGGCCCHHHHHHH----CTTEEEEEECCSCSCSCCTHHHHH
T ss_pred CCCChhhhhCCCCCCCcCCCeeEEecCcchHhHhhcCCCcccCCCHHHHHhh----CCCcCEEEEcCCCCCCCCHHHHHh
Confidence 4799999999999999987 7999999999988877766 789999999874 478999999998888899999999
Q ss_pred CCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhc
Q 005774 162 EGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV 241 (677)
Q Consensus 162 ~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~ 241 (677)
.||+|+++|+.|+ .+|+.+.+..|++.+.+|+.+ ..+++|+|||++|+||||+++|+|||...||++++|++.|+++
T Consensus 77 ~gi~~~~~~~~d~-~~p~~~~~~~~~~~~~~~~~~--~~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~~~~a~~~~r~~ 153 (169)
T 1yn9_A 77 AGLLYKKIQVPGQ-TLPPESIVQEFIDTVKEFTEK--CPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKA 153 (169)
T ss_dssp TTCEEEECCCCSS-SCCCHHHHHHHHHHHHHHHHH--STTSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCC-CCCCHHHHHHHHHHHHHHHHh--CCCCcEEEECCCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999999997 688889999999999999873 4688999999999999999999999998899999999999999
Q ss_pred CCCCcCCHHHHHHHH
Q 005774 242 RPPGIYKNEYIEALY 256 (677)
Q Consensus 242 Rp~~i~~~~~l~~L~ 256 (677)
||.++++.+|+++|+
T Consensus 154 R~~~~~~~~f~~qL~ 168 (169)
T 1yn9_A 154 RGHKIERQNYVQDLL 168 (169)
T ss_dssp HTSCCCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHh
Confidence 999999999999996
No 7
>1vs0_A Putative DNA ligase-like protein RV0938/MT0965; OB fold, nucleotidyl transferase, structural genomic protein structure initiative; HET: APK MSE; 2.40A {Mycobacterium tuberculosis}
Probab=99.92 E-value=4.5e-25 Score=233.64 Aligned_cols=163 Identities=17% Similarity=0.225 Sum_probs=125.7
Q ss_pred ccCCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCC-CcccccCCCCeeeeEEEEEecCCCCC------
Q 005774 362 RQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSN-EGLGEKTHHFTLLDGEMIIDKLPDSR------ 434 (677)
Q Consensus 362 ~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~-~~~~~~~~~~tlLDGElV~d~~~~~~------ 434 (677)
...+|++++|+||+|+++++.+++++|++|++.. ++..||+.... ..+ ...+++||||||.....+..
T Consensus 23 ~~~~~~~E~K~DG~R~~~~~~~g~v~l~SR~g~~--~t~~fPel~~~~~~l---~~~~~iLDGElv~~d~~g~~~F~~l~ 97 (310)
T 1vs0_A 23 KASQWAFEGXWDGYRLLVEADHGAVRLRSRSGRD--VTAEYPQLRALAEDL---ADHHVVLDGEAVVLDSSGVPSFSQMQ 97 (310)
T ss_dssp CTTTEEEEEECCSEEEEEEEETTEEEEEETTCCB--CGGGCGGGHHHHHHT---TTCEEEEEEEEECBCTTSCBCHHHHH
T ss_pred CCCCEEEEEccCcEEEEEEEECCEEEEEcCCCCC--chhhchhHHHHHHhC---CCccEEEeeEEEEECCCCCcCHHHHH
Confidence 4568999999999999999999999999999983 36778875432 111 12479999999986432211
Q ss_pred ----CceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHH
Q 005774 435 ----RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNK 510 (677)
Q Consensus 435 ----~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ 510 (677)
...++|++||||++||++++++||.+|+++|++.+...+ +...+++.. .+..
T Consensus 98 ~r~~~~~~~~~vFDll~~~g~~l~~~pl~eRr~~L~~~~~~~~-----------------------i~~~~~~~~-~~~~ 153 (310)
T 1vs0_A 98 NRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATS-----------------------LTVPELLPG-DGAQ 153 (310)
T ss_dssp TCCTTSCCEEEEEEEEEETTEECTTSCHHHHHHHHHHHHHHSC-----------------------CCCCCCCCS-SHHH
T ss_pred hhccCCcEEEEEEEeEEECCcCcccCCHHHHHHHHHHhccCCc-----------------------EEECccCch-HHHH
Confidence 124799999999999999999999999999999764211 111112221 3566
Q ss_pred HHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEccCCCceEEEEE
Q 005774 511 LLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLF 558 (677)
Q Consensus 511 ll~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~lLKWKp~~~nTVDF~l 558 (677)
+|+. .+.++.||||+|+.++||.+| |+..|||||+. +|+||.|
T Consensus 154 ~~~~---~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~--~~~D~vv 197 (310)
T 1vs0_A 154 AFAC---SRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHW--NTQEVVI 197 (310)
T ss_dssp HHHH---HHHTTCCEEEEEETTCCCCTTCEEEEEEEEESS--EEEEEEE
T ss_pred HHHH---HHHcCCceEEEeCCCCCcCCCCcChHHhccchh--eEEEEEE
Confidence 6664 567999999999999999999 78899999986 7999988
No 8
>2cfm_A Thermostable DNA ligase; protein-nucleotide complex, cell cycle, cell division, DNA damage, DNA recombination, DNA repair, DNA replication; HET: AMP; 1.8A {Pyrococcus furiosus} PDB: 3rr5_A*
Probab=99.91 E-value=1.7e-24 Score=246.22 Aligned_cols=167 Identities=17% Similarity=0.230 Sum_probs=127.4
Q ss_pred CeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCCCcccccCC-CCeeeeEEEEEecCCCC----------
Q 005774 365 YYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTH-HFTLLDGEMIIDKLPDS---------- 433 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~-~~tlLDGElV~d~~~~~---------- 433 (677)
+|+++||+||+|+++++.++++++++|++.. ++..||..... +....+ .+++||||||.....+.
T Consensus 243 ~~~~E~K~DG~R~~i~~~~g~v~l~SR~g~~--~t~~fPel~~~--~~~~l~~~~~iLDGElv~~d~~g~~~~F~~L~~r 318 (561)
T 2cfm_A 243 EAEFEIKYDGARVQVHKDGSKIIVYSRRLEN--VTRAIPEIVEA--LKEAIIPEKAIVEGELVAIGENGRPLPFQYVLRR 318 (561)
T ss_dssp CEEEEEECCSEEEEEEEETTEEEEECTTCCB--CGGGCHHHHHH--HHHHBCSSEEEEEEEEEEBCTTSSBCCTHHHHHH
T ss_pred cEEEEEeEceEEEEEEEECCEEEEEeCCCCC--chhhhhhHHHH--HHHhCCCcceEeeeEEEEEcCCCcccCHHHHHHH
Confidence 8999999999999999999999999999873 36678875321 100122 68999999998642111
Q ss_pred ---C--------CceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecce
Q 005774 434 ---R--------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDF 502 (677)
Q Consensus 434 ---~--------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~ 502 (677)
. ...++|++||||++||++++++||.+|+++|++.+... + .+...++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~vFDlL~l~g~~l~~~pl~eRr~~L~~~~~~~-------------~---------~i~~~~~ 376 (561)
T 2cfm_A 319 FRRKHNIEEMMEKIPLELNLFDVLYVDGQSLIDTKFIDRRRTLEEIIKQN-------------E---------KIKVAEN 376 (561)
T ss_dssp HHCCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCC-------------S---------SEEECCE
T ss_pred hhcccchhhhcccCceEEEEEEEEeECCcCcccCCHHHHHHHHHHHhCcC-------------C---------cEEEeee
Confidence 0 12368999999999999999999999999999866321 0 1445556
Q ss_pred EEchhHHHHHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEccCCCceEEEEE
Q 005774 503 WLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLF 558 (677)
Q Consensus 503 ~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~lLKWKp~~~nTVDF~l 558 (677)
+..++.+.+-+-|...+.++.||||+|+.++||.+| |+..|+||||.. +|+||+|
T Consensus 377 ~~~~~~~~~~~~~~~~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~~-dt~D~vV 432 (561)
T 2cfm_A 377 LITKKVEEAEAFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM-ENLDLVI 432 (561)
T ss_dssp EEESCHHHHHHHHHHHHHTTCCEEEEECTTCCCCTTCEEEEEEEECSSC-CCEEEEE
T ss_pred EEcCCHHHHHHHHHHHHHcCCceeEEeCCCCCCCCCCcCCCeEEEcccC-cceeEEE
Confidence 665544433333334678999999999999999999 578999999975 8999998
No 9
>2hiv_A Thermostable DNA ligase; ATP-dependent, open conformation; 2.05A {Sulfolobus solfataricus} PDB: 2hix_A*
Probab=99.90 E-value=2.4e-23 Score=238.94 Aligned_cols=168 Identities=17% Similarity=0.246 Sum_probs=128.5
Q ss_pred CeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCCCcccccC-CCCeeeeEEEEEec--CCCC--------
Q 005774 365 YYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKT-HHFTLLDGEMIIDK--LPDS-------- 433 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~-~~~tlLDGElV~d~--~~~~-------- 433 (677)
+|++++|+||+|+++++.+++++|++|++.. ++..||..... +.... ..++|||||||... .+..
T Consensus 274 ~~~~E~K~DG~R~qi~~~g~~v~l~SR~g~~--~t~~fP~l~~~--~~~~l~~~~~iLDGElv~~d~~~g~~l~F~~L~~ 349 (621)
T 2hiv_A 274 NAIVDYKYDGERAQIHKKEDKIFIFSRRLEN--ITSQYPDVVDY--VSKYIEGKEFIIEGEIVAIDPESGEMRPFQELMH 349 (621)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEECTTCCB--CGGGCHHHHHH--HHHHBCCSSEEEEEEEEEBCTTTCCBCCTHHHHH
T ss_pred cEEEEEEEcceeEEEEEcCCEEEEEcCCCcC--cHhhhhhHHHH--HHHhCCCcCeEEeEEEEEeecCCCCcCCHHHHhh
Confidence 8999999999999999999999999999983 35678864321 10011 36899999999864 2210
Q ss_pred ---C--------CceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecce
Q 005774 434 ---R--------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDF 502 (677)
Q Consensus 434 ---~--------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~ 502 (677)
. ...++|++||||++||++++++||.+|+++|++.+... + .+...++
T Consensus 350 r~~~~~~~~~~~~~~v~~~vFDlL~l~G~~l~~~pl~eRr~~L~~~~~~~-------------~---------~i~~~~~ 407 (621)
T 2hiv_A 350 RKRKSDIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRKLLESIVKPN-------------D---------YVKIAHH 407 (621)
T ss_dssp HHHCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCC-------------S---------SEEECCE
T ss_pred hccccchhhhcccCceEEEEEeccccCCCccccCCHHHHHHHHHHHhCcC-------------C---------cEEEeee
Confidence 0 12468999999999999999999999999999976321 0 1445555
Q ss_pred EEchhHHHHHHHhcccccCCCceEEEEeC--CCCCccC-CCCCeEEEccCCCc----eEEEEE
Q 005774 503 WLLSTVNKLLKEFIPKLSHDADGLVFQGW--DDPYVPR-THEGLLKWKYARMN----SVDFLF 558 (677)
Q Consensus 503 ~~~~~~~~ll~~~~~~l~h~~DGLIf~p~--~spY~~G-~~~~lLKWKp~~~n----TVDF~l 558 (677)
+...+.+.+-+-|...+.++.||||+|.. ++||.+| |+..||||||..++ |+||+|
T Consensus 408 ~~~~~~~~~~~~~~~~~~~g~EGlv~K~~~~ds~Y~~G~Rs~~WlK~K~~~~~~~~dt~D~vV 470 (621)
T 2hiv_A 408 IQANNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVV 470 (621)
T ss_dssp EEESSHHHHHHHHHHHHHTTCCEEEEECCSTTCCCCTTCEEEEEEEEETTCTTSSCEEEEEEE
T ss_pred EEeCCHHHHHHHHHHHHhcCCceEEEEecCCCCCccCCCcCCCeEEEechhccCcCceeEEEE
Confidence 66554443333333467899999999999 9999999 57899999998865 999998
No 10
>3gde_A DNA ligase; DNA-binding domain, adenylation domain, OB-fold domain, ATP-binding, cell cycle, cell division, DNA damage, DNA recombination; HET: DNA; 2.30A {Archaeoglobus fulgidus}
Probab=99.87 E-value=2.7e-22 Score=227.30 Aligned_cols=165 Identities=22% Similarity=0.340 Sum_probs=124.5
Q ss_pred CCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCCCcccccCCCCeeeeEEEEEecCCCC----------
Q 005774 364 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDS---------- 433 (677)
Q Consensus 364 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~~~---------- 433 (677)
.+|++++|+||+|+++++.++.+.+++|++. .++..||+.... +......+++||||||....+..
T Consensus 245 ~~~~~E~K~DG~R~qi~~~g~~v~l~SR~g~--d~t~~fPel~~~--~~~~l~~~~iLDGElv~~~~g~~~~F~~L~~r~ 320 (558)
T 3gde_A 245 RTAAVEWKFDGSRVQVHWDGSRVTIYSRRLE--NVTNALPDIVEE--IKKSVKPGVILDGEVIAVKEGKPMPFQHVLRRF 320 (558)
T ss_dssp SSEEEEEECSSEEEEEEECSSCCEEEETTCC--BCGGGCHHHHHH--HHHHBCSSEEEEEEEEEEETTEEECHHHHHHHH
T ss_pred cceEEEEeEeeEEEEEEEeCCEEEEEcCCCC--cccccchHHHHH--HHhhCCCCeEEEeEEEEcCCCcCCCHHHHHHHh
Confidence 5899999999999999999999999999987 346678875321 10112335999999998632210
Q ss_pred --C--------CceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceE
Q 005774 434 --R--------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFW 503 (677)
Q Consensus 434 --~--------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~ 503 (677)
. ...++|++||+|++|| +++++||.+|+++|++.+..+ + .|...+.+
T Consensus 321 ~~~~~~~~~~~~~pv~~~vFDlL~l~G-~l~~~pl~eRr~~L~~~~~~~-------------~---------~i~~~~~~ 377 (558)
T 3gde_A 321 RRKHDVAKMVEKIPLEAHFFDILYHDG-ECIDLPLRERRKLLESAVNES-------------E---------KIKLAKQI 377 (558)
T ss_dssp HC--CTHHHHHHSCEEEEEEEEEEESS-BCTTSBHHHHHHHHHHHBCCC-------------S---------SEEECCEE
T ss_pred ccccchhhHhhcCCeEEEEEEEEeeCC-CccCCCHHHHHHHHHHhcCCC-------------C---------eEEEeeeE
Confidence 0 1236899999999999 999999999999999976321 0 13444444
Q ss_pred Echh---HHHHHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEccCCCceEEEEEE
Q 005774 504 LLST---VNKLLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLFE 559 (677)
Q Consensus 504 ~~~~---~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~lLKWKp~~~nTVDF~l~ 559 (677)
...+ +..+|+ ..+.++.||||+|..++||.+| |+..|+||||. ..|+||+|-
T Consensus 378 ~~~~~~~~~~~~~---~~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~-~~t~D~vVi 433 (558)
T 3gde_A 378 VTDSVDEVRKMYD---EAISAGHEGVMIKLPSSPYIPGKRGKNWLKVKAI-METLDLVVV 433 (558)
T ss_dssp EESCHHHHHHHHH---HHHHTTCCEEEEECTTCBCCTTCEEEEEEEEESS-CCCEEEEEE
T ss_pred ecCCHHHHHHHHH---HHHHcCCceeEEecCCCCCCCCCcCCceEEEecc-cceEEEEEE
Confidence 4443 344444 4677999999999999999999 57899999975 789999983
No 11
>1fvi_A Chlorella virus DNA ligase-adenylate; adenylated DNA ligase; HET: AMP; 2.00A {Chlorella virus} SCOP: b.40.4.6 d.142.2.1 PDB: 2q2t_A* 2q2u_A* 1p8l_A*
Probab=99.87 E-value=6e-22 Score=208.43 Aligned_cols=161 Identities=18% Similarity=0.139 Sum_probs=110.3
Q ss_pred cCCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCCCcccccCCCCeeeeEEEEEecCC-----------
Q 005774 363 QRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLP----------- 431 (677)
Q Consensus 363 ~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~----------- 431 (677)
..+|++++|+||+|+++ ++ +|++|++..+ + .|+... .+. ... +++||||||+....
T Consensus 18 ~~~~~~E~K~DG~R~~~----~g-~l~SR~g~~~--t--~p~l~~--~~~-~~~-~~iLDGElv~~~~~F~~l~~~~~~~ 84 (297)
T 1fvi_A 18 QFPCLATPKIAGIRSVK----QT-QMLSRTFKPI--R--NSVMNR--LLT-ELL-PEGSDGEISIEGATFQDTTSAVMTG 84 (297)
T ss_dssp CSSEEEEECCCSEEEEE----SS-SEECTTSCBC--S--CHHHHH--HHH-HHS-CTTEEEEEECTTSCHHHHHHHHHSC
T ss_pred CCcEEEEeeEeeeeEEe----cC-EEECCCCccc--C--cHHHHH--HHH-hcC-CeeEEEEEEECCCCHHHHHHHhccC
Confidence 46899999999999987 44 9999999733 2 253211 111 113 89999999983210
Q ss_pred CC-CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecc--eEEchhH
Q 005774 432 DS-RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKD--FWLLSTV 508 (677)
Q Consensus 432 ~~-~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~--~~~~~~~ 508 (677)
.. ....++|++||||++| ..+||.+|+++|++.+..... +. ... .+...+ ....++.
T Consensus 85 ~~~~~~~~~~~vFDll~l~----~~~pl~eRr~~L~~~~~~~~~-----------~~---~~~--~i~~~~~~~~~~~~~ 144 (297)
T 1fvi_A 85 HKMYNAKFSYYWFDYVTDD----PLKKYIDRVEDMKNYITVHPH-----------IL---EHA--QVKIIPLIPVEINNI 144 (297)
T ss_dssp C----CCEEEEEEEECSSC----TTSCHHHHHHHHHHHHHHCGG-----------GG---GCS--SEEEEECCCEEECSH
T ss_pred CCCCccceEEEEEeccCCC----CCCCHHHHHHHHHHHHhhcCC-----------cc---ccc--eEEEcCcceEecCCH
Confidence 00 1235799999999987 789999999999997632110 00 000 133333 3443333
Q ss_pred HHHHHHhcccccCCCceEEEEeCCCCCccCCCC----CeEEEccCCCceEEEEE
Q 005774 509 NKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHE----GLLKWKYARMNSVDFLF 558 (677)
Q Consensus 509 ~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~----~lLKWKp~~~nTVDF~l 558 (677)
+.+.+-+...+.++.||||+|..++||.+||+. .||||||. .|+|++|
T Consensus 145 ~~~~~~~~~~~~~g~EGlv~K~~ds~Y~~GRs~~~~g~wlK~K~~--~~~d~vV 196 (297)
T 1fvi_A 145 TELLQYERDVLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMKQF--KDAEATI 196 (297)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECTTCCCCSSBCCTTTTSSEEECCC--EEEEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEEECCCCCcCCCCCCCCCCCeEEECCC--CCEEEEE
Confidence 333333334678999999999999999999988 99999996 5999998
No 12
>1x9n_A DNA ligase I; 5'-adenylated nicked DNA, protein-DNA complex, L complex; HET: DNA DOC AMP; 3.00A {Homo sapiens} SCOP: a.235.1.1 b.40.4.6 d.142.2.1
Probab=99.86 E-value=8.3e-22 Score=228.07 Aligned_cols=175 Identities=14% Similarity=0.203 Sum_probs=127.9
Q ss_pred hccCCeEEEEcccceEEEEEEECC-EEEEEeCCCccccccCcCCCcCCC-CcccccCCCCeeeeEEEEEecCCCC-----
Q 005774 361 LRQRYYYATWKADGTRYMMLITID-GCYLIDRCFNFRRVQMRFPCRNSN-EGLGEKTHHFTLLDGEMIIDKLPDS----- 433 (677)
Q Consensus 361 l~~~~Y~V~eK~DG~R~ll~i~~~-~vyLidR~~~~~~v~~~FP~~~~~-~~~~~~~~~~tlLDGElV~d~~~~~----- 433 (677)
+...+|+++||+||+|+++++.++ .++|++|++.. ++..||+.... ..+......++|||||||.....++
T Consensus 327 ~~~~~~~~E~K~DG~R~qih~~~~g~v~l~SR~g~d--~t~~fPel~~~l~~~~~~~~~~~ILDGElV~~d~~~g~~~~F 404 (688)
T 1x9n_A 327 FEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQED--NTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPF 404 (688)
T ss_dssp TTTSCEEEEEEESSEEEEEEECTTSCEEEECTTSCB--CTTTCHHHHHTSGGGBCTTCCCEEEEEEEEEECTTTCSBCCH
T ss_pred cCCCeEEEEEccccEeEEEEEcCCCeEEEEeCCCCc--ccccchHHHHHHHHhhccCCCCeEEeEEEEEEeCCCCCcCCH
Confidence 455689999999999999999654 69999999983 36678875331 1111112468999999998432111
Q ss_pred ---------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEE
Q 005774 434 ---------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVR 498 (677)
Q Consensus 434 ---------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~ 498 (677)
....++|++||||++||++++++||.+|+++|++.+.... + .+.
T Consensus 405 ~~L~~r~r~~~~~~~~~~~v~~~vFDlL~l~G~~l~~~Pl~eRr~~L~~~~~~~~------------~---------~i~ 463 (688)
T 1x9n_A 405 QVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETE------------G---------EFV 463 (688)
T ss_dssp HHHTTSCSSCCCGGGCCSEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCBT------------T---------TEE
T ss_pred HHHHHHhhcccchhhcccceEEEEEechhhcCCccccCCHHHHHHHHHHhhccCC------------C---------cEE
Confidence 0124799999999999999999999999999999663210 0 134
Q ss_pred ecceEEchhHHHHHHHhcccccCCCceEEEEeC--CCCCccC-CCCCeEEEccCCC----ceEEEEE
Q 005774 499 RKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGW--DDPYVPR-THEGLLKWKYARM----NSVDFLF 558 (677)
Q Consensus 499 ~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~--~spY~~G-~~~~lLKWKp~~~----nTVDF~l 558 (677)
..+++...+.+.+-+-|...+.++.||||+|+. +++|.+| |+..|||||+..+ +|+||+|
T Consensus 464 ~~~~~~~~~~~~~~~~~~~a~~~g~EGlV~K~~~~ds~Y~~GkRs~~WlK~K~~y~~~~~dt~D~vV 530 (688)
T 1x9n_A 464 FATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVV 530 (688)
T ss_dssp ECCEECCCCHHHHHHHHHHHHHTSEEEEEEEESSSSCSSCTTTCSEEEEEEEHHHHHSSCEEEEEEE
T ss_pred EEeeEecCCHHHHHHHHHHHHhcCCceeEEeecccCCCCCCCCcCchHheeehhhhccccccccEEE
Confidence 444555544333333333467899999999999 8999998 5789999999653 7999987
No 13
>3l2p_A DNA ligase 3; DNA ligase, DNA repair, ATP-binding, cell cycle, cell divisi damage; HET: DNA AMP; 3.00A {Homo sapiens}
Probab=99.84 E-value=8.2e-20 Score=207.63 Aligned_cols=165 Identities=18% Similarity=0.314 Sum_probs=120.2
Q ss_pred CCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCC-CCc-ccc--cCCCCeeeeEEEEEecC-CCCC----
Q 005774 364 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNS-NEG-LGE--KTHHFTLLDGEMIIDKL-PDSR---- 434 (677)
Q Consensus 364 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~-~~~-~~~--~~~~~tlLDGElV~d~~-~~~~---- 434 (677)
.+|++++|+||+|++++..++.+.+++|++.-. ||.... ... +.. ....+++||||||.-.. .+..
T Consensus 247 ~~~~~E~K~DG~R~qih~~g~~v~l~SR~g~~~-----~p~~~~~l~~~l~~~~~~~~~~iLDGElv~~d~~~g~~~~F~ 321 (579)
T 3l2p_A 247 NGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPV-----LPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFG 321 (579)
T ss_dssp TCEEEEECCCSEEEEEEEETTEEEEECTTSCBC-----CGGGTTTGGGTHHHHSTTCSEEEEEEEEEEBCTTTCCBCCGG
T ss_pred CCeEEEEccCcEEEEEEEECCEEEEECCCCCcc-----ChhHHHHHHHHHHHhcCcCCceEEEeEEEEEeCCCCcccCHH
Confidence 479999999999999999999999999998732 443211 000 000 11356999999998432 1111
Q ss_pred -----------CceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceE
Q 005774 435 -----------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFW 503 (677)
Q Consensus 435 -----------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~ 503 (677)
...+.|++||+|++||++++++||.+|+++|++.+.. .. + . +...++.
T Consensus 322 ~L~~~~~~~~~~~~v~~~vFDlL~l~G~~L~~~Pl~eRr~~L~~~~~~-~~-----------~-------~--i~~~~~~ 380 (579)
T 3l2p_A 322 TLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVE-IP-----------N-------R--IMFSEMK 380 (579)
T ss_dssp GGSHHHHHHCSSCCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHCCC-BT-----------T-------T--EEECCEE
T ss_pred HHHHHhhhhcccCCeEEEEEEeeccCCCccccCCHHHHHHHHHHHhhc-CC-----------C-------e--EEEeeeE
Confidence 1257999999999999999999999999999996632 10 0 1 3333333
Q ss_pred Ech---hHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCeEEEccCCC------ceEEEEE
Q 005774 504 LLS---TVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARM------NSVDFLF 558 (677)
Q Consensus 504 ~~~---~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~~lLKWKp~~~------nTVDF~l 558 (677)
.+. .+..+|+ ..+.++.||||+|..++||.+|+. .|+|||+..+ .|+|+.|
T Consensus 381 ~~~~~~~~~~~~~---~a~~~g~EGlv~K~~ds~Y~~Grr-~WlK~K~~y~~~g~~~~t~D~vV 440 (579)
T 3l2p_A 381 RVTKALDLADMIT---RVIQEGLEGLVLKDVKGTYEPGKR-HWLKVKKDYLNEGAMADTADLVV 440 (579)
T ss_dssp EECSHHHHHHHHH---HHHHTTCCCEEEEESSCCCCTTCE-EEEEECTTTCC---CCEEEEEEE
T ss_pred EcCCHHHHHHHHH---HHHHhCCCceEEecCcCCCCCCCe-eeEEEechhhccccccccccEEE
Confidence 333 3344554 357799999999999999999997 8999999854 6999987
No 14
>1a0i_A DNA ligase; DNA replication; HET: DNA ATP; 2.60A {Enterobacteria phage T7} SCOP: b.40.4.6 d.142.2.1
Probab=99.83 E-value=1.4e-20 Score=202.44 Aligned_cols=187 Identities=16% Similarity=0.140 Sum_probs=128.1
Q ss_pred cccccchhchhh-hcc-CCeEEEEcccceEEEEEEE-CCEEEEEeCCCccc-cc---cCcCCCcCCCCcccc---cCCCC
Q 005774 349 HPVSLNSDNLQL-LRQ-RYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFR-RV---QMRFPCRNSNEGLGE---KTHHF 418 (677)
Q Consensus 349 qPVsl~r~nl~~-l~~-~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~-~v---~~~FP~~~~~~~~~~---~~~~~ 418 (677)
+||+.--..+.. +.. ..|++++|+||+|+++++. ++.++|++|++.-+ .+ +-.||..... +.. ....+
T Consensus 9 ~pv~pmL~~~~~~l~~~~~~~~E~K~DG~R~~~~~~~~g~v~l~SR~g~~~~~l~~~~~~~p~~~~~--l~~~~~~~~~~ 86 (348)
T 1a0i_A 9 KAVSFVESAIKKALDNAGYLIAEIKYDGVRGNICVDNTANSYWLSRVSKTIPALEHLNGFDVRWKRL--LNDDRCFYKDG 86 (348)
T ss_dssp EEEECCHHHHHHHHHHHSSEEEEECCCSEEEEEEEETTSEEEEECTTSCBCGGGGGGCEECHHHHHH--HHSTTCCCTTE
T ss_pred CcCchhhhcHHHHHhhcCcEEEEEeeceeEEEEEEeCCCeEEEEcCCCCCCcchhhhhcccchHHHH--HhhhhccCCCC
Confidence 566444455543 332 4566777999999999998 57899999998621 11 0133322110 100 12348
Q ss_pred eeeeEEEEEecCC-----------------------------CC--------CCceeEEEEeEEeecC----Cccc---c
Q 005774 419 TLLDGEMIIDKLP-----------------------------DS--------RRQERRYLIYDMMAIN----QASV---I 454 (677)
Q Consensus 419 tlLDGElV~d~~~-----------------------------~~--------~~~~~~yliFDiL~~~----G~~l---~ 454 (677)
++||||||....+ .. ....++|++||||++| |+++ +
T Consensus 87 ~iLDGElv~~~~~F~~l~~~~~~k~~~~k~v~~~~~~~r~~~~~~~~i~~~~~~~~~~~~vFDll~l~~~~~G~~l~~~~ 166 (348)
T 1a0i_A 87 FMLDGELMVKGVDFNTGSGLLRTKWTDTKNQEFHEELFVEPIRKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDCDVMT 166 (348)
T ss_dssp EEEEEEEEESSSCTTTHHHHHHCCSCCSSBSSCC--------CCCSCCCCCBCTTTEEEEEEEEEEHHHHHHCCCEEEEH
T ss_pred EEEEEEEEEeCCCHHHHHHHhcccccccccccccccccccccccccccccccccCcEEEEEEeeEeeCCCCCCccchhhc
Confidence 9999999984211 00 0124789999999999 9999 8
Q ss_pred CCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHHHHhcccccCCCceEEEEeCCCC
Q 005774 455 ERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDP 534 (677)
Q Consensus 455 ~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~sp 534 (677)
.+||.+|+++|++.+.. . | .-.++..+++.+++.+.+-+-+...+.++.||||+|..++|
T Consensus 167 ~~pl~eRr~~L~~l~~~-~------------~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~EGlv~K~~ds~ 226 (348)
T 1a0i_A 167 LLMQEHVKNMLPLLQEY-F------------P-------EIEWQAAESYEVYDMVELQQLYEQKRAEGHEGLIVKDPMCI 226 (348)
T ss_dssp HHHHHHHHHHHHHHHHH-C------------T-------TSEEEECCEEEESSHHHHHHHHHHHHTTTCCCEEEECTTCE
T ss_pred cCCHHHHHHHHHHHhhh-C------------C-------CCeEEEeccEecCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Confidence 99999999999996521 0 0 01256666666554443333333468899999999999999
Q ss_pred CccCCCCCeEEEccCCCceEEEEEE
Q 005774 535 YVPRTHEGLLKWKYARMNSVDFLFE 559 (677)
Q Consensus 535 Y~~G~~~~lLKWKp~~~nTVDF~l~ 559 (677)
|.+|++..|+||||.. |+||+|-
T Consensus 227 Y~~Grr~~wlK~K~~~--~~D~vVi 249 (348)
T 1a0i_A 227 YKRGKKSGWWKMKPEN--EADGIIQ 249 (348)
T ss_dssp ECSEEEEEEEEESCCE--EEEEEEE
T ss_pred CCCCCccCcEEEeecc--cEEEEEE
Confidence 9999876799999976 9999983
No 15
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=99.83 E-value=9e-20 Score=172.88 Aligned_cols=122 Identities=21% Similarity=0.355 Sum_probs=103.1
Q ss_pred CCeeEEEEcCCCCCCC----CcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCCh
Q 005774 139 RKLGLVIDLTNTTRYY----PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNR 214 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y----~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~R 214 (677)
.+|++||||+.+.... +++.+...||+|+++|+.|....|..+.+..+++ ||+.....+++|+|||.+|.||
T Consensus 27 ~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~~----~i~~~~~~~~~vlVHC~~G~~R 102 (157)
T 3rgo_A 27 ENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQ----FALKYQALGQCVYVHCKAGRSR 102 (157)
T ss_dssp SCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHHH----HHHHHHHTTCEEEEESSSSSSH
T ss_pred cCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHHH----HHHHHHHCCCEEEEECCCCCCh
Confidence 6899999999765432 3556778899999999999755777766666554 5554445678999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCC
Q 005774 215 TGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (677)
Q Consensus 215 TG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (677)
||+++++|||...||++++|++.++++||.+.++.+|+.+|..|+..+..
T Consensus 103 sg~~~~a~l~~~~~~~~~~a~~~v~~~R~~~~~~~~~~~~L~~~~~~l~~ 152 (157)
T 3rgo_A 103 SATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEITA 152 (157)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887643
No 16
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=99.82 E-value=4.2e-20 Score=179.87 Aligned_cols=132 Identities=20% Similarity=0.356 Sum_probs=107.7
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+.+.+ .....|++|+++|+.|. ..++ +...+..+.+||+.....+++|+|||++|.||||++
T Consensus 32 ~gI~~Vi~l~~e~p~~---~~~~~~i~~~~ipi~D~-~~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 104 (177)
T 2oud_A 32 LNIGYVINVTTHLPLY---HYEKGLFNYKRLPATDS-NKQN---LRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATI 104 (177)
T ss_dssp TTEEEEEECCSSSCCT---TTTTTCSEEEECCCCCC-SSCC---CHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCcc---cccCCCceEEEEECCCC-Cccc---HHHHHHHHHHHHHHHHhcCCcEEEEcCCCCCchHHH
Confidence 5899999999764332 13457999999999985 3332 233445666788766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCCCCCCCCCCCcccc
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKR 277 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~ 277 (677)
++||||...||++++|+++++++||.+.+|.+|+.+|..|+..+.....+....|.|..
T Consensus 105 v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~~~~~~~~~p~~~~ 163 (177)
T 2oud_A 105 VIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLMG 163 (177)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHTSSCCCCCTTSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcCCCCcccCcchhH
Confidence 99999999999999999999999999999999999999998887655556666777764
No 17
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=99.82 E-value=8.6e-20 Score=174.48 Aligned_cols=139 Identities=19% Similarity=0.251 Sum_probs=116.5
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHH
Q 005774 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNA 181 (677)
Q Consensus 102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e 181 (677)
.+||+...|+..+... .++.+. ..+|++||||+.+ .|+++.+...|++|+++|+.|+ .+|+.+
T Consensus 23 ~~~i~tq~P~~~t~~~------------~~~~l~--~~gi~~Iv~l~~~--~~~~~~~~~~~i~~~~~p~~d~-~~p~~~ 85 (167)
T 3s4o_A 23 FHFLILDAPSPSNLPT------------YIKELQ--HRGVRHLVRVCGP--TYDATLVKSRGIDVHSWPFDDG-APPTRA 85 (167)
T ss_dssp EEEEEECCCCGGGHHH------------HHHHHH--TTTEEEEEECSCC--CSCTHHHHTTTCEEEECCCCTT-CCCCHH
T ss_pred ceEEEeCCCchhhHHH------------HHHHHH--HCCCCEEEECCCC--CCCHHHHHHCCCeEEEeccCCC-CCCCHH
Confidence 4799999998876543 333343 3689999999964 6788888889999999999996 789888
Q ss_pred HHHHHHHHHHHHHHhcc----cCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 005774 182 SVNNFVYEVTQFLSRQK----HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (677)
Q Consensus 182 ~i~~f~~~v~~fi~~~~----~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (677)
.+..|++.+.+.+.... .++++|+|||++|+||||+++|+|||...|+++++|++.+++.||.++. ..|...|++
T Consensus 86 ~~~~~~~~i~~~~~~~~~~~~~~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~~~~a~~~vr~~R~~~v~-~~Q~~fl~~ 164 (167)
T 3s4o_A 86 VLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKRKGAIN-QTQMHWITK 164 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCCCEEEEECSSSSSHHHHHHHHHHHHTTCCCHHHHHHHHHHHSTTCSC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccccCCCcEEEECCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCC-HHHHHHHHh
Confidence 88888887777765322 3478999999999999999999999998799999999999999999986 888888876
Q ss_pred H
Q 005774 258 F 258 (677)
Q Consensus 258 ~ 258 (677)
|
T Consensus 165 ~ 165 (167)
T 3s4o_A 165 Y 165 (167)
T ss_dssp C
T ss_pred h
Confidence 4
No 18
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=99.82 E-value=1.3e-19 Score=194.53 Aligned_cols=147 Identities=22% Similarity=0.313 Sum_probs=120.8
Q ss_pred ccCceeecCCCCccccccCCCCCCC-CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCC
Q 005774 100 IGGCIIPSKVPLSEFFNDCIPPGKR-YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVP 178 (677)
Q Consensus 100 I~~~fip~k~Pl~~~~~~~i~~~~r-~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P 178 (677)
++++|++|+.|..... ++.+++ +++.+.++.+++ .+|++||||+ .+.|+++.+...||+|+++|+.|+ ..|
T Consensus 182 ~p~~~i~~~~P~~~~~---~~~~~~~~~~~~~~~~L~~--~GI~~VInL~--~~~y~~~~~~~~gi~~~~ipi~D~-~~P 253 (348)
T 1ohe_A 182 IPDRFIAFCGPHSRAR---LESGYHQHSPETYIQYFKN--HNVTTIIRLN--KRMYDAKRFTDAGFDHHDLFFADG-STP 253 (348)
T ss_dssp ETTTEEEECCCCSSCB---CSTTCCBCCTHHHHHHHHH--TTEEEEEECS--CCSSCTHHHHTTTCEEEECCCCTT-CCC
T ss_pred eCCeEEEECCCccccc---cccccccCCHHHHHHHHHH--cCCCEEEECC--CCcCChhhhhcCCcEEEEecCCCC-CCC
Confidence 4678999999987632 233333 567888877776 5799999999 446888889889999999999996 688
Q ss_pred CHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcC--CHHHHHHHH
Q 005774 179 DNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIY--KNEYIEALY 256 (677)
Q Consensus 179 ~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~--~~~~l~~L~ 256 (677)
+.+.+..|++.+ ...+++|+|||++|+||||+++|||||...||++++|++.++++||+++. +++|+.+|.
T Consensus 254 ~~~~~~~fi~~~-------~~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~s~~eAl~~vr~~Rp~~i~~pnq~Fl~qL~ 326 (348)
T 1ohe_A 254 TDAIVKEFLDIC-------ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMKQ 326 (348)
T ss_dssp CHHHHHHHHHHH-------HSCSSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHH-------HhCCCcEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCccCHHHHHHHHHH
Confidence 887776665443 35688999999999999999999999998999999999999999998665 789999998
Q ss_pred HHHhh
Q 005774 257 TFYHE 261 (677)
Q Consensus 257 ~~y~~ 261 (677)
.+.+.
T Consensus 327 ~~~w~ 331 (348)
T 1ohe_A 327 TNLWL 331 (348)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 19
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=99.82 E-value=5.7e-20 Score=176.32 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=97.7
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++|||++.+.+. .+ ..|++|+++|+.|. |. ..+..++..+.+||+++...+++|||||.+|.||||++
T Consensus 34 ~gIt~Vlnl~~~~~~----~~-~~~~~~~~ipi~D~---~~-~~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~v 104 (161)
T 3emu_A 34 NNISSILLVGIEVPS----LF-KDQCDILRLDIVSE---EG-HQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAI 104 (161)
T ss_dssp TTEEEEEEEC------------CTTSEEEEECCCCS---ST-THHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHHH
T ss_pred CCCCEEEEeCCCCcc----cc-CCCCEEEEEeCcCC---CC-CcHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHH
Confidence 689999999975432 22 25899999999874 33 45666778888999987778899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (677)
++||||..+||++++|+++++++||.+.+|.+|+.||..|+..+.
T Consensus 105 v~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~ 149 (161)
T 3emu_A 105 VIAFLMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFEKKLE 149 (161)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999887654
No 20
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=99.82 E-value=3.1e-20 Score=174.22 Aligned_cols=115 Identities=13% Similarity=0.239 Sum_probs=95.3
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+.+.+ + ..|++|+++|+.|. ..++ +...+..+.+||++....+++|+|||.+|.||||++
T Consensus 28 ~gI~~Vi~l~~~~~~~----~-~~~~~~~~ip~~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~ 98 (144)
T 3ezz_A 28 LGITALLNVSSDCPNH----F-EGHYQYKCIPVEDN-HKAD---ISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATI 98 (144)
T ss_dssp TTCCEEEECSSSCCCT----T-TTTSEEEECCCCSS-SSCC---TTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHH
T ss_pred CCCeEEEEccCCCCcc----C-CCCceEEEEEcccC-CCCC---hHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHH
Confidence 6899999999764332 2 25899999999986 3333 223344555677766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhc
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (677)
++||||...||++++|+++++++||.+.+|.+|+.+|..|+..+
T Consensus 99 ~~aylm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l 142 (144)
T 3ezz_A 99 CLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQV 142 (144)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHTTCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987754
No 21
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=99.82 E-value=3.4e-20 Score=174.19 Aligned_cols=114 Identities=18% Similarity=0.280 Sum_probs=95.7
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+.+.+. ..|++|+++|+.|.. .+ .+...+..+.+||+++...+++|||||.+|.||||++
T Consensus 28 ~gI~~Vl~l~~~~~~~~-----~~~~~~~~ipi~D~~-~~---~~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~ 98 (144)
T 3s4e_A 28 NKVTHILNVAYGVENAF-----LSDFTYKSISILDLP-ET---NILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAI 98 (144)
T ss_dssp TTCCEEEECSSSCCCCC-----TTTSEEEECCCCCCT-TS---CGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred cCCCEEEEccCCCCCCC-----CCCCEEEEEeccCCC-CC---chHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHH
Confidence 68999999997543322 248999999999862 22 2334456667788877778899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhh
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (677)
++||||..+||++++|+++++++||.+.+|.+|+.+|..|+..
T Consensus 99 v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~ 141 (144)
T 3s4e_A 99 VIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQEG 141 (144)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHSTTCCCCHHHHHHHHHTTHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988764
No 22
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=99.81 E-value=2.5e-19 Score=169.82 Aligned_cols=153 Identities=18% Similarity=0.265 Sum_probs=118.2
Q ss_pred CccCCCCCC-cc-cCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEE
Q 005774 90 WLDCPPFGQ-EI-GGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHV 167 (677)
Q Consensus 90 W~~~~~~g~-~I-~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~ 167 (677)
|++.|.... .+ ..+||.+..|+..+. .+..+.+.. .+|++||+|+. ..|++..+...|++|+
T Consensus 2 ~~~~p~~~~~~~~~~~~i~s~~p~~~t~------------~df~~~l~~--~gi~~Iv~l~~--~~~~~~~~~~~~~~~~ 65 (159)
T 1rxd_A 2 RMNRPAPVEVTYKNMRFLITHNPTNATL------------NKFIEELKK--YGVTTIVRVCE--ATYDTTLVEKEGIHVL 65 (159)
T ss_dssp ------CEEEEETTEEEEECCCCCGGGH------------HHHHHHHHH--TTEEEEEECSC--CCSCCHHHHHTTCEEE
T ss_pred CCCCCCcccccCCCceEEEeCCCccccH------------HHHHHHHHH--cCCCEEEEcCC--CccCHHHHHHcCCEEE
Confidence 777765332 23 468999999976543 344444443 68999999995 4577777888899999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcC
Q 005774 168 KIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIY 247 (677)
Q Consensus 168 ~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~ 247 (677)
++|+.|. .+|+.+.+..+++.+.+++. ..++++|+|||++|.||||+++|+|||. .|+++++|++.+++.||.++
T Consensus 66 ~~p~~d~-~~~~~~~~~~~~~~i~~~~~--~~~~~~vlVHC~aG~~Rtg~~~a~~l~~-~~~~~~~a~~~vr~~R~~~~- 140 (159)
T 1rxd_A 66 DWPFDDG-APPSNQIVDDWLSLVKIKFR--EEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAF- 140 (159)
T ss_dssp ECCC--C-CCCCHHHHHHHHHHHHHHHH--HSTTCEEEEECSSSSTTHHHHHHHHHHH-TTCCHHHHHHHHHTTCTTCC-
T ss_pred eCCCcCC-CCCCHHHHHHHHHHHHHHHH--hCCCCeEEEECCCCCCHHHHHHHHHHHH-hCCCHHHHHHHHHHHCCCCC-
Confidence 9998774 78888888888888888776 3457899999999999999999999997 69999999999999999988
Q ss_pred CHHHHHHHHHHHhhcC
Q 005774 248 KNEYIEALYTFYHEKR 263 (677)
Q Consensus 248 ~~~~l~~L~~~y~~~~ 263 (677)
+.+|..+|++|+...+
T Consensus 141 ~~~q~~~l~~~~~~~r 156 (159)
T 1rxd_A 141 NSKQLLYLEKYRPKMR 156 (159)
T ss_dssp CHHHHHHHHHCCCCCC
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999998877543
No 23
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=99.81 E-value=1.2e-19 Score=172.86 Aligned_cols=117 Identities=17% Similarity=0.247 Sum_probs=99.7
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCC-cEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEG-IKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~g-I~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~ 217 (677)
.+|++||||+.+. ++.+...| ++|+++|+.|. ..| .+..++..+.+||++....+++|+|||.+|+||||+
T Consensus 30 ~gI~~Vi~l~~~~----~~~~~~~~~i~~~~ipi~D~-~~~---~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~ 101 (155)
T 2hxp_A 30 LGIRYILNVTPNL----PNFFEKNGDFHYKQIPISDH-WSQ---NLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVT 101 (155)
T ss_dssp TTEEEEEECSSSC----CCTTTTCTTCEEEECCCCGG-GGG---GHHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHH
T ss_pred CCCCEEEEeCCCC----cccccCCCCeEEEEEECccC-CCC---CHHHHHHHHHHHHHHHHHcCCcEEEECCCCCchhHH
Confidence 5899999999754 23455554 99999999885 333 344556777889887777789999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005774 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 218 li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (677)
+++||||...||++++|+++++++||.+.+|.+|+.+|.+|+....
T Consensus 102 vv~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~~~ 147 (155)
T 2hxp_A 102 VTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFERSLR 147 (155)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHCSCCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999988764
No 24
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=99.81 E-value=6.7e-20 Score=172.23 Aligned_cols=115 Identities=15% Similarity=0.248 Sum_probs=96.8
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+...+ + ..|++|+++|+.|. ..++ +..++..+.+||++....+++|+|||.+|.||||++
T Consensus 28 ~gi~~Vi~l~~~~~~~----~-~~~~~~~~ipi~D~-~~~~---l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~ 98 (145)
T 2nt2_A 28 RGVRYILNVTREIDNF----F-PGVFEYHNIRVYDE-EATD---LLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSAST 98 (145)
T ss_dssp TTEEEEEECCSSSCCS----C-BTTBEEEECCCCSS-TTCC---CGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCCEEEEeCCCCccC----C-CCCcEEEEEEEeCC-CCCc---HHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 6899999999765332 2 25899999999885 2222 334456667888877667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhc
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (677)
++||||...||++++|+++++++||.+.+|.+|+.+|.+|+..+
T Consensus 99 v~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l 142 (145)
T 2nt2_A 99 VIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGIL 142 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999988765
No 25
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=99.81 E-value=1.5e-19 Score=170.44 Aligned_cols=119 Identities=19% Similarity=0.365 Sum_probs=98.3
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+.+.+ .....|++|+++|+.|. ..++ +...+..+.+||+.....+++|+|||++|+||||++
T Consensus 28 ~gi~~Vi~l~~e~p~~---~~~~~~~~~~~ipi~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RSg~~ 100 (149)
T 1zzw_A 28 LNIGYVINVTTHLPLY---HYEKGLFNYKRLPATDS-NKQN---LRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATI 100 (149)
T ss_dssp TTEEEEEECCSSSCCT---TGGGTCSEEEECCCCCS-SSCC---CHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCc---ccCCCCeEEEEEECCCC-Cccc---HHHHHHHHHHHHHHHHHcCCeEEEECCCCCCHHHHH
Confidence 5899999999764332 23457999999999986 3333 223345566777766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (677)
++||||...||++++|+++++++||.+.+|.+|+++|..|+..+..
T Consensus 101 ~~ayl~~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~ 146 (149)
T 1zzw_A 101 VIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNN 146 (149)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999887653
No 26
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=99.81 E-value=3.7e-19 Score=174.95 Aligned_cols=144 Identities=19% Similarity=0.280 Sum_probs=120.7
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCC
Q 005774 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (677)
Q Consensus 100 I~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (677)
.+.+||++..|+... ..+.++.++ ..+|++||||+. ..|+++.+...||.|+++|+.|. .+|+
T Consensus 35 ~~~r~I~tq~P~~~t------------~~~~~~~L~--~~gi~~Iv~l~~--~~~~~~~~~~~~i~~~~~pi~d~-~~~~ 97 (189)
T 3rz2_A 35 KNMRFLITHNPTNAT------------LNKFIEELK--KYGVTTIVRVCE--ATYDTTLVEKEGIHVLDWPFDDG-APPS 97 (189)
T ss_dssp TTEEEEEECCCCTTT------------HHHHHHHHH--TTTEEEEEECSC--CCSCCHHHHHSSCEEEECCCCSS-SCCC
T ss_pred CCCeEEEeCCCCccc------------HHHHHHHHH--HcCCcEEEEeCC--CcCCHHHHHHcCcEEEEecCCCC-CCCC
Confidence 357899999998743 334455554 368999999994 45788888889999999998885 7888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHH
Q 005774 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFY 259 (677)
Q Consensus 180 ~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y 259 (677)
.+.+..|++.+.+.+. ..++++|+|||.+|.||||+++|+||| ..||++++|++.+++.||.++ +..|+.+|.+|+
T Consensus 98 ~~~~~~~~~~i~~~~~--~~~~~~VlVHC~aG~gRSg~~va~~L~-~~g~~~~~a~~~vr~~R~~~v-~~~Q~~~l~~~~ 173 (189)
T 3rz2_A 98 NQIVDDWLSLVKIKFR--EEPGCCIAVHCVAGLGRAPVLVALALI-EGGMKYEDAVQFIRQKRRGAF-NSKQLLYLEKYR 173 (189)
T ss_dssp SHHHHHHHHHHHHHHH--HSTTCEEEEECSSSSTTHHHHHHHHHH-TTTCCHHHHHHHHHTTSSSCC-CHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHH--hCCCCcEEEECCCCCCHHHHHHHHHHH-HcCCCHHHHHHHHHHHCcCCC-CHHHHHHHHHHH
Confidence 8999999988877764 356789999999999999999999999 479999999999999999988 889999998887
Q ss_pred hhcCC
Q 005774 260 HEKRL 264 (677)
Q Consensus 260 ~~~~~ 264 (677)
.....
T Consensus 174 ~~lrl 178 (189)
T 3rz2_A 174 PKMRL 178 (189)
T ss_dssp CCCCC
T ss_pred HHhcc
Confidence 76554
No 27
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=99.80 E-value=1.7e-19 Score=170.45 Aligned_cols=120 Identities=19% Similarity=0.322 Sum_probs=97.8
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhccc-CCceEEEEcCCCCChhHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKH-SKKYILVHCTHGHNRTGY 217 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~-~~~~VlVHC~~G~~RTG~ 217 (677)
.+|++||||+.+.....++.++..|++|+++|+.|. ..++ +...+..+.+||++... .+++|+|||++|+||||+
T Consensus 26 ~gi~~Vi~l~~~~~~~~~~~~~~~~i~~~~ip~~d~-~~~~---l~~~~~~~~~~i~~~~~~~~~~vlVHC~aG~~RSg~ 101 (151)
T 2e0t_A 26 LGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS-PAFD---MSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSAT 101 (151)
T ss_dssp HTCCEEEETTCCTTCCSCTTHHHHTCEEEECCCCSS-TTSC---THHHHHHHHHHHHHHHHSTTCCEEEECSSSSHHHHH
T ss_pred cCCCEEEEccCCcccCCccccCCCCeEEEEEecccC-CCcc---HHHHHHHHHHHHHHHHhcCCCcEEEECCCCCChHHH
Confidence 479999999976543345556667999999999874 2222 22334556677776554 688999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005774 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 218 li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (677)
+++||||...||++++|+++++++|| +.+|.+|+.+|..|...+.
T Consensus 102 ~~~ayl~~~~~~~~~~a~~~v~~~R~-i~pn~~f~~qL~~~e~~l~ 146 (151)
T 2e0t_A 102 LVLAYLMLYHHLTLVEAIKKVKDHRG-IIPNRGFLRQLLALDRRLR 146 (151)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHTSC-SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997 7899999999999887654
No 28
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=99.80 E-value=1.5e-19 Score=176.87 Aligned_cols=116 Identities=11% Similarity=0.167 Sum_probs=95.1
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++|||++.+...+.. .+ .|++|+++|+.|. . .+..++..+.+||+++...|++|||||.+|+||||++
T Consensus 64 ~gIt~Vlnv~~e~~~~~~-~~--~~i~y~~ip~~d~--~----~i~~~~~~~~~fI~~~~~~g~~VLVHC~~G~sRS~tv 134 (182)
T 2j16_A 64 LPFDVVINVAEEANDLRM-QV--PAVEYHHYRWEHD--S----QIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATL 134 (182)
T ss_dssp TTCSEEEECCSCC-----------CCEEEECCCSSG--G----GGGGGHHHHHHHHHHHHHTTCCEEEEESSCCSHHHHH
T ss_pred hCCCEEEEecCCCCCchh-cc--CCceEEEEecCCC--c----hHHHHHHHHHHHHHHHHhcCCeEEEECCCCCChHHHH
Confidence 479999999977544432 12 3899999999652 2 2444566777888877778999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (677)
++||||...+|++++|+++++++||.+.+|.+|+.||.+|+..+.
T Consensus 135 v~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~ 179 (182)
T 2j16_A 135 IIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVALN 179 (182)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999987653
No 29
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=99.79 E-value=1.2e-18 Score=163.95 Aligned_cols=116 Identities=22% Similarity=0.386 Sum_probs=99.3
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+...+.. ...|++|+++|+.|+ ..|+.+.+..|++.+.+. ...+++|+|||.+|.||||++
T Consensus 34 ~gi~~Vi~l~~~~~~~~~---~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~i~~~----~~~~~~vlVHC~~G~~Rsg~~ 105 (150)
T 4erc_A 34 LGVRHLVSLTERGPPHSD---SCPGLTLHRLRIPDF-CPPAPDQIDRFVQIVDEA----NARGEAVGVHCALGFGRTGTM 105 (150)
T ss_dssp TTEEEEEECSSSCCTTGG---GCTTSEEEECCCCTT-SCCCHHHHHHHHHHHHHH----HHTTCEEEEECSSSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCccc---ccCCceEEEEecCCC-CCCCHHHHHHHHHHHHHH----HHCCCCEEEECCCCCCHHHHH
Confidence 589999999977544322 336999999999997 688887777776655444 346789999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhc
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (677)
+++|||...||++++|++.+++.||.++++.+|..+|++|+..+
T Consensus 106 ~a~~l~~~~~~~~~~a~~~vr~~R~~~~~~~~q~~~l~~~~~~l 149 (150)
T 4erc_A 106 LACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQRT 149 (150)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHSTTCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998764
No 30
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=99.79 E-value=2.3e-19 Score=175.10 Aligned_cols=120 Identities=17% Similarity=0.287 Sum_probs=98.7
Q ss_pred CCeeEEEEcCCCCCCC----CcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccC-CceEEEEcCCCCC
Q 005774 139 RKLGLVIDLTNTTRYY----PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHS-KKYILVHCTHGHN 213 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y----~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~-~~~VlVHC~~G~~ 213 (677)
.+|++||||+.+.... .++.+...||+|+++|+.|. ..++. ..++..+.+||++.... +++|+|||.+|.|
T Consensus 52 ~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~-~~~~~---~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~ 127 (183)
T 3f81_A 52 LGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDT-QEFNL---SAYFERAADFIDQALAQKNGRVLVHCREGYS 127 (183)
T ss_dssp HTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCS-TTSCG---GGGHHHHHHHHHHHHHSTTCCEEEECSSSSS
T ss_pred CCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCC-CcccH---HHHHHHHHHHHHHHHHcCCCeEEEECCCCcc
Confidence 4799999999765422 34566778999999999986 34432 33445566677766555 7899999999999
Q ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005774 214 RTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 214 RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (677)
|||++++||||...||++++|+++++++|| +.+|.+|+.+|..|...+.
T Consensus 128 RSg~~v~ayLm~~~~~~~~~A~~~v~~~R~-i~pn~~f~~qL~~~e~~L~ 176 (183)
T 3f81_A 128 RSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLA 176 (183)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHSC-CCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 8999999999999877654
No 31
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=99.79 E-value=3.6e-19 Score=170.83 Aligned_cols=117 Identities=14% Similarity=0.235 Sum_probs=97.8
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+.+.+ ...|++|+++|+.|.. .++ +..++..+.+||+.....+++|+|||++|+||||++
T Consensus 36 ~gI~~Vi~l~~~~~~~-----~~~~~~~~~ip~~D~~-~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 106 (164)
T 2hcm_A 36 AGITLCVNVSRQQPGP-----RAPGVAELRVPVFDDP-AED---LLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAV 106 (164)
T ss_dssp TTEEEEEECSSSCCCC-----CCTTCEEEECCCCSCT-TSC---CHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHH
T ss_pred CCCeEEEEcCCCCCCC-----CCCCCEEEEEeCcCCC-Cch---HHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHH
Confidence 6899999999765432 1368999999998852 222 233455666788776667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (677)
++||||...||++++|+++++++||.+.++.+|+++|..|+..+..
T Consensus 107 ~~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~ 152 (164)
T 2hcm_A 107 CTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQTLQA 152 (164)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999887654
No 32
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=99.78 E-value=3.2e-18 Score=160.76 Aligned_cols=116 Identities=22% Similarity=0.388 Sum_probs=97.2
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+.+ ++...++ ++.|+++|+.|+ ..|+.+.+.++++.+.+.+ ..+++|+|||.+|.||||++
T Consensus 35 ~gi~~Vv~l~~~~e-~~~~~~~--~~~~~~~~~~d~-~~p~~~~~~~~~~~i~~~~----~~~~~vlVHC~aG~~Rsg~~ 106 (151)
T 2img_A 35 LGVRHLVSLTERGP-PHSDSCP--GLTLHRLRIPDF-CPPAPDQIDRFVQIVDEAN----ARGEAVGVHCALGFGRTGTM 106 (151)
T ss_dssp TTEEEEEECSSSCC-TTGGGCT--TSEEEECCCCTT-CCCCHHHHHHHHHHHHHHH----HTTCEEEEECSSSSSHHHHH
T ss_pred CCCCEEEECCCCCC-CCHHHHh--hCCeEEEeCCCC-CCCCHHHHHHHHHHHHHHH----hCCCcEEEECCCCCChHHHH
Confidence 58999999997654 3333443 567999999997 6788776766666554443 35789999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhc
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (677)
+|+|||...||++++|++.++++||.++++.+|..+|+.++..+
T Consensus 107 ~~~~l~~~~~~~~~~a~~~~r~~R~~~~~~~~q~~~l~~~~~~L 150 (151)
T 2img_A 107 LACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQRT 150 (151)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHSTTCSCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHh
Confidence 99999998899999999999999999999999999999998754
No 33
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=99.77 E-value=8.4e-19 Score=172.43 Aligned_cols=117 Identities=16% Similarity=0.246 Sum_probs=97.2
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+.+... ..|++|+++|+.|.. .++ +...+..+.+||+++...+++|||||.+|+||||++
T Consensus 44 ~gIt~Vi~l~~~~~~~~-----~~~i~~~~ipi~D~~-~~~---~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~v 114 (188)
T 2esb_A 44 NQITMVINVSVEVVNTL-----YEDIQYMQVPVADSP-NSR---LCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAAL 114 (188)
T ss_dssp TTCCEEEECCSSCCCCC-----CTTCEEEECCCCSCT-TSC---GGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCcC-----CCCCEEEEEeCcCCC-Ccc---HHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHH
Confidence 58999999997543211 258999999998752 222 223455666788876667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (677)
++||||...||++++|+++++++||.+.+|.+|+.+|..|+..+..
T Consensus 115 v~ayLm~~~~~s~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~ 160 (188)
T 2esb_A 115 CLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFG 160 (188)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999999887654
No 34
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=99.77 E-value=7e-19 Score=176.08 Aligned_cols=118 Identities=14% Similarity=0.198 Sum_probs=98.7
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+... .+ ..|++|+++|+.|. ..|+. ...+..+.+||++....+++|||||.+|+||||++
T Consensus 30 ~GIt~VInl~~e~~~----~~-~~gi~y~~ipi~D~-~~~~l---~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtv 100 (211)
T 2g6z_A 30 LHITALLNVSRRTSE----AC-MTHLHYKWIPVEDS-HTADI---SSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTI 100 (211)
T ss_dssp HTCCEEEECSSCCCC----TT-CTTSEEEECCCCSS-TTSCC---GGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHH
T ss_pred CCCCEEEEcCCCCcc----cc-ccCCEEEEeeCCCC-CCCCH---HHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHH
Confidence 479999999976432 22 36999999999986 33432 23345566777766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCCC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLD 265 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~ 265 (677)
++||||...||++++|+++++++||.+.+|.+|+++|.+|+..+..+
T Consensus 101 v~AYLm~~~g~s~~eAl~~vr~~Rp~i~pN~~f~~qL~~~e~~l~~~ 147 (211)
T 2g6z_A 101 CMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYESEILPS 147 (211)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999987753
No 35
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=99.77 E-value=2.6e-18 Score=183.18 Aligned_cols=151 Identities=17% Similarity=0.265 Sum_probs=130.0
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCC
Q 005774 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (677)
Q Consensus 100 I~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (677)
|+.+||+|..|... +...+|.+.++++..+++++.+...|+||+++ +.|+++.|. .+++++|++|+ .+|+
T Consensus 30 IT~riIam~~P~~~-----~e~~yRn~i~dv~~~L~~~h~~~y~V~NL~sE-~~Yd~~~f~---~~v~~~p~pD~-~~P~ 99 (339)
T 3v0d_A 30 VTDHVIAMSFPSSG-----RQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSE-RGYDETKFD---NHVYRVMIDDH-NVPT 99 (339)
T ss_dssp EETTEEEECCEESS-----SCCTTSEEHHHHHHHHHHHSTTCEEEEEEETT-CCCCGGGGT---TCEEEEEECTT-SCCC
T ss_pred EecCEEEEECCCCC-----chhhccCCHHHHHHHHHHhCCCceEEEECCCC-CCCChHHcC---CeEEEeccCCC-CCCC
Confidence 78899999999654 34567889999999999988889999999865 789988875 35788999997 6899
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcCC--------CCcCCHH
Q 005774 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVRP--------PGIYKNE 250 (677)
Q Consensus 180 ~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~-s~~eAi~~~~~~Rp--------~~i~~~~ 250 (677)
.+.+..|++.+..+++ ..++++|+|||++|.||||+++|||||....+ ++++|++.|+.+|+ .++..+.
T Consensus 100 ~~~l~~~~~~v~~~l~--~~~~~~v~vHC~~G~gRtg~~ia~~Li~~~~~~~~~~Al~~~~~~R~~~~~~~~~~~v~~ps 177 (339)
T 3v0d_A 100 LVDLLKFIDDAKVWMT--SDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVETAS 177 (339)
T ss_dssp HHHHHHHHHHHHHHHH--TCTTCEEEEECSSSSHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHHSSCCTTSCCCCC-CHH
T ss_pred HHHHHHHHHHHHHHHh--cCCCCeEEEEeCCCCcchHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCccccccccccCCHH
Confidence 9999999999999987 45668999999999999999999999998777 89999999999998 4778999
Q ss_pred HHHHHHHHHhhc
Q 005774 251 YIEALYTFYHEK 262 (677)
Q Consensus 251 ~l~~L~~~y~~~ 262 (677)
|++.|..+..-+
T Consensus 178 Q~Ryv~yf~~~l 189 (339)
T 3v0d_A 178 QIRYVGYFEKIK 189 (339)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999987665543
No 36
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=167.61 Aligned_cols=115 Identities=17% Similarity=0.280 Sum_probs=95.2
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+... ...|++|+++|+.|. ..++ +..++..+.+||++....+++|+|||++|+||||++
T Consensus 31 ~gI~~Vi~l~~~~~~------~~~~i~~~~ip~~D~-~~~~---l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~ 100 (165)
T 1wrm_A 31 NKVTHILSVHDSARP------MLEGVKYLCIPAADS-PSQN---LTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTL 100 (165)
T ss_dssp TTEEEEEECSTTCCC------CSTTCEEEECCCCSS-TTSC---CGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCC------CCCCCeEEEEECCCC-CCcc---HHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHH
Confidence 689999999965421 136899999999885 2222 222344556788766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (677)
++||||...||++++|+++++++||.+.+|.+|+.+|..|+..+.
T Consensus 101 ~~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~ 145 (165)
T 1wrm_A 101 VIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEV 145 (165)
T ss_dssp HHHHHHHTSSCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988653
No 37
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=99.77 E-value=3.2e-18 Score=183.60 Aligned_cols=151 Identities=15% Similarity=0.170 Sum_probs=122.9
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCC
Q 005774 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (677)
Q Consensus 100 I~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (677)
|+.+||+|..|... +...+|.+.+++++.+++++.+...|+||+ .+.|+++.|.. +++++|++|+ .+|+
T Consensus 27 IT~riIam~~P~~~-----~e~~yrn~i~~v~~~L~~~H~~~y~V~NLs--e~~Yd~~~f~~---~V~~~~~pD~-~~P~ 95 (361)
T 3n0a_A 27 VTSRIIVMSFPLDS-----VDIGFRNQVDDIRSFLDSRHLDHYTVYNLS--PKSYRTAKFHS---RVSECSWPIR-QAPS 95 (361)
T ss_dssp SSSSEEEEEC-----------------CHHHHHHHHHHHTTCEEEEECS--SSCCGGGSCGG---GEEECCCCSS-SCCC
T ss_pred EcCCEEEEECCCCC-----chhhhcCCHHHHHHHHHHhCCCeEEEEECC--CCCCChhhcCC---cEEEeecCCC-CCCC
Confidence 78899999999765 234567788899999998877899999997 47898888865 4788999997 6899
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005774 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 180 ~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~-s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
.+.+..|++.+.+|+. ..++++|+|||++|.||||++||||||....+ ++++|+++|+.+|+.+...+.|++.|..+
T Consensus 96 l~~l~~~~~~i~~~l~--~~~~~~v~VHC~aG~GRtg~~ia~~Li~~~~~~~~~eAl~~~~~~R~~~~~~psQ~ryv~yf 173 (361)
T 3n0a_A 96 LHNLFAVCRNMYNWLL--QNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYM 173 (361)
T ss_dssp HHHHHHHHHHHHHHHH--HCTTCEEEEEECSCTHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHSTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--cCCCCeEEEEeCCCCccHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 9999999999999997 35678999999999999999999999997666 99999999999999988999999999666
Q ss_pred HhhcC
Q 005774 259 YHEKR 263 (677)
Q Consensus 259 y~~~~ 263 (677)
..-+.
T Consensus 174 ~~ll~ 178 (361)
T 3n0a_A 174 CDLLA 178 (361)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 66544
No 38
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=99.77 E-value=7.8e-19 Score=166.42 Aligned_cols=119 Identities=13% Similarity=0.197 Sum_probs=95.8
Q ss_pred CCeeEEEEcCCCCCC-CCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHH
Q 005774 139 RKLGLVIDLTNTTRY-YPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~-y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~ 217 (677)
.+|++||||+.+... +.+..+ ..|++|+++|+.|. ..+ .+..++..+.+||+.....+++|+|||++|+||||+
T Consensus 32 ~gI~~Vi~l~~~~e~~~~~~~~-~~~~~~~~ip~~d~-~~~---~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS~~ 106 (154)
T 2r0b_A 32 HGITHIICIRQNIEANFIKPNF-QQLFRYLVLDIADN-PVE---NIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAA 106 (154)
T ss_dssp TTCCEEEEEECGGGTTTSSCCC-TTTSEEEEEECCSS-TTS---CCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHH
T ss_pred cCCeEEEEeCCccccccCCCCC-cCceeEEEEECCCC-Ccc---cHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChHHH
Confidence 579999999865321 211122 26899999999874 222 233345666778877666789999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhc
Q 005774 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (677)
Q Consensus 218 li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (677)
+++||||...||++++|+++++++||.+.+|.+|+.+|..|...+
T Consensus 107 ~~~ayl~~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~l 151 (154)
T 2r0b_A 107 FVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAIY 151 (154)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999887654
No 39
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=99.76 E-value=1.3e-18 Score=175.38 Aligned_cols=120 Identities=18% Similarity=0.328 Sum_probs=97.3
Q ss_pred CCeeEEEEcCCCCCCC--CcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcc-cCCceEEEEcCCCCChh
Q 005774 139 RKLGLVIDLTNTTRYY--PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQK-HSKKYILVHCTHGHNRT 215 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y--~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~-~~~~~VlVHC~~G~~RT 215 (677)
.+|++||||+.+.... .+..+...||+|+++|+.|. ..++ +..++..+.+||+++. ..+++|||||.+|+|||
T Consensus 78 ~gIt~VInl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~-~~~~---l~~~~~~~~~fI~~~l~~~~~~VLVHC~aG~sRS 153 (219)
T 2y96_A 78 AGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDL-PTFD---LSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRS 153 (219)
T ss_dssp TTCCEEEETTBSTTSBCCHHHHTTTSCCEEEECCCCSS-TTSC---GGGGHHHHHHHHHHHHTSTTCCEEEECSSSSSHH
T ss_pred CCCeEEEECCCCccccccchhhhcccCcEEEEEECCCC-Cchh---HHHHHHHHHHHHHHHHHccCCeEEEECCCCCCHH
Confidence 5799999999653211 23445578999999999875 2332 3344556667888765 57889999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005774 216 GYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 216 G~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (677)
|++++||||...||++++|+++++++|+ +.+|.+|+.+|..|+..+.
T Consensus 154 ~tvv~aYLm~~~~~s~~eAl~~vr~~R~-i~pn~~f~~qL~~~e~~L~ 200 (219)
T 2y96_A 154 ATLVLAYLMIHKDMTLVDAIQQVAKNRC-VLPNRGFLKQLRELDKQLV 200 (219)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHTTSC-CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhCC-CCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996 7899999999999888654
No 40
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=164.87 Aligned_cols=115 Identities=15% Similarity=0.223 Sum_probs=94.4
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+... + ..|++|+++|+.|. ..++. ...+..+.+||+.....+++|+|||++|+||||++
T Consensus 32 ~gI~~Vi~l~~~~~~-----~-~~~i~~~~ipi~D~-~~~~~---~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 101 (160)
T 1yz4_A 32 NKITHIISIHESPQP-----L-LQDITYLRIPVADT-PEVPI---KKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTI 101 (160)
T ss_dssp TTCCEEEEECSSCCC-----C-CTTCEEEEECCCSC-TTSCG---GGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHH
T ss_pred CCCeEEEEccCCCCC-----c-cCCCeEEEEECCCC-CCccH---HHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 579999999965321 1 26899999999986 33332 22344556677766567899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (677)
++||||...||++++|+++++++||.+.+|.+|+++|..|+....
T Consensus 102 ~~aylm~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~~~ 146 (160)
T 1yz4_A 102 VTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEFGWASS 146 (160)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999988887543
No 41
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=99.75 E-value=4.6e-18 Score=167.46 Aligned_cols=117 Identities=15% Similarity=0.181 Sum_probs=96.8
Q ss_pred CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
.+|++||||+.+.+... ..|++|+++|+.|. ..|+. ..++..+.+||+.....+++|+|||.+|+||||++
T Consensus 50 ~gI~~Vi~l~~~~~~~~-----~~gi~y~~ipi~D~-~~~~l---~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtv 120 (190)
T 2wgp_A 50 RGITCIVNATIEIPNFN-----WPQFEYVKVPLADM-PHAPI---GLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATL 120 (190)
T ss_dssp TTCCEEEECCSSSCCCC-----CTTSEEEECCCCSS-TTSCG---GGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCCC-----CCCCEEEEEEcccC-CCCCH---HHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHH
Confidence 68999999997543221 25899999999986 34442 23345566777766567889999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCC
Q 005774 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (677)
Q Consensus 219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (677)
++||||...||++++|+++++++||.+.+|.+|+++|..|+..+..
T Consensus 121 v~ayLm~~~~~s~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~ 166 (190)
T 2wgp_A 121 CIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYERQLFG 166 (190)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999887654
No 42
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=99.75 E-value=3e-18 Score=170.86 Aligned_cols=121 Identities=15% Similarity=0.230 Sum_probs=97.4
Q ss_pred CCeeEEEEcCCCCCCCC--cchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhccc-CCceEEEEcCCCCChh
Q 005774 139 RKLGLVIDLTNTTRYYP--TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKH-SKKYILVHCTHGHNRT 215 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~--~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~-~~~~VlVHC~~G~~RT 215 (677)
.+|++||||+.+....+ ...++..|++|+++|+.|. |..+.+. .+..+.+||+++.. .+++|||||.+|+|||
T Consensus 70 ~gIt~Vinl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~---p~~dl~~-~f~~~~~fI~~~l~~~~~~VLVHC~aG~sRS 145 (205)
T 2pq5_A 70 LGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDN---PFFDLSV-YFLPVARYIRAALSVPQGRVLVHCAMGVSRS 145 (205)
T ss_dssp HTCCEEEETBCSTTSCCCHHHHTTTSSCEEEECBCCCC---TTSCGGG-GHHHHHHHHHHHHTSTTCCEEEECSSSSSHH
T ss_pred cCCeEEEEeCCCcccCCcchhhhccCCceEEeeecCCC---CcchHHH-HHHHHHHHHHHHHhcCCCeEEEECCCCCcHH
Confidence 47999999997542222 2334567999999999873 4433333 34456678876654 6889999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCC
Q 005774 216 GYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (677)
Q Consensus 216 G~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (677)
|++++||||...||++++|+++++++|| +.+|.+|+.||..++..+..
T Consensus 146 ~tvv~aYLm~~~~~s~~~A~~~vr~~R~-i~pn~gf~~qL~~~e~~l~~ 193 (205)
T 2pq5_A 146 ATLVLAFLMIYENMTLVEAIQTVQAHRN-ICPNSGFLRQLQVLDNRLGR 193 (205)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHTTTSC-CCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998 68999999999999887654
No 43
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=99.75 E-value=2e-18 Score=167.77 Aligned_cols=113 Identities=22% Similarity=0.358 Sum_probs=93.7
Q ss_pred CCe--eEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhH
Q 005774 139 RKL--GLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTG 216 (677)
Q Consensus 139 ~~I--~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG 216 (677)
.+| ++||||+.+...+ ...|++|+++|+.|.. .++ +..++..+.+||+.+...+++|+|||.+|+||||
T Consensus 53 ~gI~~~~Ii~l~~~~~~~-----~~~~~~~~~~p~~d~~-~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 123 (176)
T 3cm3_A 53 SEVKFKYVLNLTMDKYTL-----PNSNINIIHIPLVDDT-TTD---ISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSG 123 (176)
T ss_dssp SSSCCSEEEECSSSCCCC-----TTSCCEEEECCCCCSS-SCC---CGGGHHHHHHHHHHHHHHTCCEEEECSSSSSHHH
T ss_pred cCCCCCEEEEecCCCCCc-----CCCCCEEEEEECCCCC-ccc---HHHHHHHHHHHHHHHHHCCCcEEEECCcCCCHHH
Confidence 679 9999999765443 2368999999998863 333 1223445556776655568899999999999999
Q ss_pred HHHHHHHHHhcCCC-----HHHHHHHHHhcCCCCcCCHHHHHHHHHHHh
Q 005774 217 YMIVHFLMRSQSMS-----VAQAIKKFAEVRPPGIYKNEYIEALYTFYH 260 (677)
Q Consensus 217 ~li~aYLm~~~~~s-----~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~ 260 (677)
++++||||...+|+ +++|++.++++||.+.++.+|+.+|.+|+.
T Consensus 124 ~~v~aylm~~~~~~~~~v~~~~A~~~vr~~R~~~~pn~~f~~qL~~~~~ 172 (176)
T 3cm3_A 124 AMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKYV 172 (176)
T ss_dssp HHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCccccHHHHHHHHHHHCCCCCCCHHHHHHHHHHHh
Confidence 99999999999999 999999999999999999999999998876
No 44
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=99.73 E-value=3.2e-17 Score=174.55 Aligned_cols=152 Identities=20% Similarity=0.321 Sum_probs=127.7
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCC
Q 005774 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (677)
Q Consensus 100 I~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (677)
|+.+|++|..|.. .++..+|.+.++++..+.....+...|+||+++ +.|+++.+ +++++++|+.|+ .+|+
T Consensus 22 It~~li~~~~P~~-----~~e~l~r~~i~~Vv~~l~~~~~~~~~v~nl~~e-~~y~~~~~---~~~~~~~~~~D~-~~P~ 91 (324)
T 1d5r_A 22 IYPNIIAMGFPAE-----RLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAE-RHYDTAKF---NCRVAQYPFEDH-NPPQ 91 (324)
T ss_dssp EETTEEEECCCBS-----SCCTTCCCBHHHHHHHHHHHSSSCEEEEEEESS-CCCCTTSC---SSCEEEEEECTT-SCCC
T ss_pred EcCcEEEEeCCCC-----cchhhhccCHHHHHHHHHhcCCCcEEEEEcCCC-CCCChHHh---CCeEEEEeecCC-CCCc
Confidence 6678999999953 244557889999999988887789999999864 56776554 467999999997 6888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcC---CCCcCCHHHHHHH
Q 005774 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVR---PPGIYKNEYIEAL 255 (677)
Q Consensus 180 ~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~-s~~eAi~~~~~~R---p~~i~~~~~l~~L 255 (677)
.+.+..|++.+.+|+. ..++++|+|||++|.||||++||||||..+++ ++++|++.|+.+| |+++.++.|.+.|
T Consensus 92 ~~~l~~~~~~i~~~l~--~~~~~~VlVHC~aG~gRTGt~ia~yL~~~~~~~~~~eal~~~~~~R~~r~~~v~~~~Q~~yl 169 (324)
T 1d5r_A 92 LELIKPFCEDLDQWLS--EDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYV 169 (324)
T ss_dssp HHHHHHHHHHHHHHHT--TTSCSEEEEECSSSSHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHCSSSCSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hcCCCeEEEECCCCCChhHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCCCCCCCHHHHHHH
Confidence 8999999999999987 35678999999999999999999999998885 9999999988777 5788999999999
Q ss_pred HHHHhhcC
Q 005774 256 YTFYHEKR 263 (677)
Q Consensus 256 ~~~y~~~~ 263 (677)
..+...+.
T Consensus 170 ~~~~~~l~ 177 (324)
T 1d5r_A 170 YYYSYLLK 177 (324)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 87766544
No 45
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=99.72 E-value=3.7e-17 Score=163.45 Aligned_cols=129 Identities=19% Similarity=0.217 Sum_probs=102.7
Q ss_pred HHHHHHHHcCCCeeEEEEcCCCCC--CCC----cchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCc
Q 005774 129 QVIHQLRVLGRKLGLVIDLTNTTR--YYP----TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKK 202 (677)
Q Consensus 129 ~l~~~~~~~~~~I~~VIdLt~~~~--~y~----~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~ 202 (677)
+-++.++. .+|++||||+.+.. .|. ++.+...||+|+++|+.|+ ..|+.+.+..+++.+...+ ..++
T Consensus 62 ~d~~~L~~--~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~-~~p~~~~~~~~~~~i~~~~----~~~~ 134 (212)
T 1fpz_A 62 KDTEELKS--CGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG-GTPDIASCCEIMEELTTCL----KNYR 134 (212)
T ss_dssp HHHHHHHH--HTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHHHHHHHHH----HTTC
T ss_pred HHHHHHHH--CCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHHHHHHHHH----hCCC
Confidence 33455554 47999999996421 222 4556778999999999997 6788776666665554433 3678
Q ss_pred eEEEEcCCCCChhHHHHHHHHHH-hcCCCHHHHHHHHHhcC-CCCcCCHHHHHHHHHHHhhcCC
Q 005774 203 YILVHCTHGHNRTGYMIVHFLMR-SQSMSVAQAIKKFAEVR-PPGIYKNEYIEALYTFYHEKRL 264 (677)
Q Consensus 203 ~VlVHC~~G~~RTG~li~aYLm~-~~~~s~~eAi~~~~~~R-p~~i~~~~~l~~L~~~y~~~~~ 264 (677)
+|+|||++|+||||+++|+|||. ..|+++++|++.++++| +.++.+..|..+|++|+..+..
T Consensus 135 ~VlVHC~aG~gRTg~~~a~~L~~~~~g~~~~~a~~~vr~~R~~~~~~~~~Q~~~l~~~~~~l~~ 198 (212)
T 1fpz_A 135 KTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHEFRDKLAA 198 (212)
T ss_dssp CEEEECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCTTSSCSHHHHHHHTTHHHHHHC
T ss_pred CEEEECCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 58999999999999999 7888899999999888776643
No 46
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=99.70 E-value=1.1e-16 Score=158.19 Aligned_cols=116 Identities=22% Similarity=0.376 Sum_probs=94.7
Q ss_pred CCCe--eEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChh
Q 005774 138 GRKL--GLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRT 215 (677)
Q Consensus 138 ~~~I--~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RT 215 (677)
..+| ++||||+.+...+ ...|++|+++|+.|.. .++ +..++..+.+||+.....+++|+|||++|+|||
T Consensus 69 ~~gI~~~~Vi~l~~~~~~~-----~~~~~~~~~~p~~d~~-~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RS 139 (195)
T 2q05_A 69 SSEVKFKYVLNLTMDKYTL-----PNSNINIIHIPLVDDT-TTD---ISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRS 139 (195)
T ss_dssp TSSSCCSEEEECSSSCCCC-----TTCCCEEEECCCCCSS-SCC---CGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred hCCCCCCEEEEECCCCCCc-----ccCCcEEEEEEcCCCC-ccc---HHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChH
Confidence 4678 9999999765332 3468999999998852 222 122334455666655556889999999999999
Q ss_pred HHHHHHHHHHhcCCC-----HHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhc
Q 005774 216 GYMIVHFLMRSQSMS-----VAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (677)
Q Consensus 216 G~li~aYLm~~~~~s-----~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (677)
|+++++|||...+|+ +++|++.++++||.++++.+|+++|.+||...
T Consensus 140 g~~v~~yL~~~~~~~~~~v~~~~A~~~vr~~R~~~~~n~~f~~qL~~~~~~~ 191 (195)
T 2q05_A 140 GAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKYVID 191 (195)
T ss_dssp HHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCccccCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999 99999999999999999999999999998754
No 47
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=99.67 E-value=7.7e-17 Score=153.25 Aligned_cols=116 Identities=25% Similarity=0.360 Sum_probs=94.2
Q ss_pred CCeeEEEEcCCCCCCC-Cc-------chhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCC
Q 005774 139 RKLGLVIDLTNTTRYY-PT-------SDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTH 210 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y-~~-------~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~ 210 (677)
.+|++||||+.+.... .+ +.+...|++|+++|+.|+ ..|+.+.+..|++ ||.+....+ +|||++
T Consensus 27 ~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~-~~p~~~~~~~~~~----~i~~~~~~~---lVHC~a 98 (161)
T 2i6j_A 27 EGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDG-GVPSDSQFLTIMK----WLLSEKEGN---LVHCVG 98 (161)
T ss_dssp HTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHHH----HHHHCCTTE---EEECSS
T ss_pred CCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCC-CCCChHHHHHHHH----HHHHhCCCC---EEECCC
Confidence 4799999999653221 11 226678999999999987 6787766665554 555433333 999999
Q ss_pred CCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhc
Q 005774 211 GHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (677)
Q Consensus 211 G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (677)
|.||||+++++|||...|+++++|++.+++.||.++++.+|..+|+.++..+
T Consensus 99 G~~Rtg~~~~~~l~~~~~~~~~~a~~~~r~~R~~~~~~~~q~~~l~~~~~~l 150 (161)
T 2i6j_A 99 GIGRTGTILASYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMFLLRVEGMR 150 (161)
T ss_dssp SSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCSHHHHHHHHHHHHTH
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHH
Confidence 9999999999999998899999999999999999999999999999988765
No 48
>3vnn_A DNA ligase 4; non-homologous END joining, DNA repair, XRCC4; HET: DNA; 2.90A {Homo sapiens}
Probab=99.66 E-value=3.5e-16 Score=146.40 Aligned_cols=101 Identities=19% Similarity=0.299 Sum_probs=79.8
Q ss_pred eEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCC--------CcccccCCCCeeeeEEEEEecCCCC----
Q 005774 366 YYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSN--------EGLGEKTHHFTLLDGEMIIDKLPDS---- 433 (677)
Q Consensus 366 Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~--------~~~~~~~~~~tlLDGElV~d~~~~~---- 433 (677)
|++++|+||+|++++..++.+.+++|++. .++..||+.... ..+ .....++|||||||.-..++.
T Consensus 1 f~~E~K~DG~R~q~~~~g~~v~l~SR~g~--d~t~~fPel~~~~~l~~~i~~~~-~~~~~~~iLDGEiv~~d~~~~~f~~ 77 (139)
T 3vnn_A 1 FYIETKLDGERMQMHKDGDVYKYFSRNGY--NYTDQFGASPTEGSLTPFIHNAF-KADIQICILDGEMMAYNPNTQTFMQ 77 (139)
T ss_dssp CCCCCCCCCEEEEEEEETTEEEEECSSCC--BCTTTSCSSTTC--CCSGGGSCC-CTTCCEEEEEEEEEEEETTTTEECC
T ss_pred CEEEEEECeEEEEEEEECCEEEEEeCCCC--CchhhccchhhhcchhHHHHHHH-hccCCceEeeeEEEEecCCCCCHHH
Confidence 68999999999999999999999999998 447789975431 111 112367999999998432211
Q ss_pred -------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHh
Q 005774 434 -------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEV 469 (677)
Q Consensus 434 -------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i 469 (677)
....++|++||+|++||++++++||.+|+++|++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~vFDlL~l~G~~L~~~pl~eRr~~L~~l~ 126 (139)
T 3vnn_A 78 KGTKFDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIF 126 (139)
T ss_dssp C-------------CCEEEEEEEEEEEETTEECSSSCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhccCceEEEEEEEEEeECCcCcccCCHHHHHHHHHHHh
Confidence 013578999999999999999999999999999966
No 49
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.62 E-value=1.8e-15 Score=158.80 Aligned_cols=113 Identities=18% Similarity=0.192 Sum_probs=89.1
Q ss_pred CCeeEEEEcCCCCC--CC--Ccch----hhhC-CcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcc-cCCceEEEEc
Q 005774 139 RKLGLVIDLTNTTR--YY--PTSD----LKKE-GIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQK-HSKKYILVHC 208 (677)
Q Consensus 139 ~~I~~VIdLt~~~~--~y--~~~~----~~~~-gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~-~~~~~VlVHC 208 (677)
.+|++||||+.+.. ++ +... ++.. ||+|+++|+.|. . ...+...+..+.+||+++. ..+++|||||
T Consensus 38 ~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~-~---~~~l~~~~~~~~~~I~~~l~~~g~~VLVHC 113 (294)
T 3nme_A 38 IGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDF-D---AFDLRMRLPAVVGTLYKAVKRNGGVTYVHS 113 (294)
T ss_dssp TTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTT-C---HHHHHHHHHHHHHHHHHHHHHHCSEEEEEC
T ss_pred CCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCC-C---CCCHHHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 58999999996432 11 2222 2444 799999999986 2 2344455667777887664 4578999999
Q ss_pred CCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHH
Q 005774 209 THGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALY 256 (677)
Q Consensus 209 ~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~ 256 (677)
++|+||||++++||||..+||++++|+++++++||. .||.+++.+..
T Consensus 114 ~aG~sRS~tvv~ayLm~~~g~s~~~A~~~v~~~Rp~-~Pn~~~l~~~~ 160 (294)
T 3nme_A 114 TAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSC-FPKLDAIRNAT 160 (294)
T ss_dssp SSSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHHCCC-CCCHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHhCCCHHHHHHHHHHhCCC-CCChhhhhHHH
Confidence 999999999999999999999999999999999998 89998876654
No 50
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=99.53 E-value=3.1e-15 Score=141.10 Aligned_cols=100 Identities=17% Similarity=0.263 Sum_probs=75.0
Q ss_pred CCeeEEEEcCCCCCCCC-cchhhhCCcEEEEEecCCCCC---CCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCCh
Q 005774 139 RKLGLVIDLTNTTRYYP-TSDLKKEGIKHVKIQCKGRDA---VPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNR 214 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y~-~~~~~~~gI~y~~ip~~d~~~---~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~R 214 (677)
.+|++||||+.+..... ++.++..||+|+++|+.|... .++.+.+.+++ +++. ...+++|+|||++|+||
T Consensus 32 ~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~----~~i~--~~~~~~vlvHC~aG~~R 105 (151)
T 1xri_A 32 LGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMAL----KVLL--DEKNHPVLIHCKRGKHR 105 (151)
T ss_dssp HTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHH----HHHH--CGGGCSEEEECSSSSSH
T ss_pred CCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHH----HHHH--cCCCCCEEEECCCCCCH
Confidence 46999999997643221 233556799999999988521 22444555544 3444 23578999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHhcCCCC
Q 005774 215 TGYMIVHFLMRSQSMSVAQAIKKFAEVRPPG 245 (677)
Q Consensus 215 TG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~ 245 (677)
||+++|+||+ ..||+.++|++.++..|++.
T Consensus 106 Tg~~~a~~l~-~~g~~~~~a~~~~~~~~~~~ 135 (151)
T 1xri_A 106 TGCLVGCLRK-LQKWCLTSIFDEYQRFAAAK 135 (151)
T ss_dssp HHHHHHHHHH-HTTBCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHH-HhCCCHHHHHHHHHHhcCCC
Confidence 9999988877 68999999999999999873
No 51
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=99.17 E-value=8.5e-11 Score=111.66 Aligned_cols=93 Identities=14% Similarity=0.153 Sum_probs=72.2
Q ss_pred CCeeEEEEcCCCCCCC-Cc------chhhhCCcE-EEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCC
Q 005774 139 RKLGLVIDLTNTTRYY-PT------SDLKKEGIK-HVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTH 210 (677)
Q Consensus 139 ~~I~~VIdLt~~~~~y-~~------~~~~~~gI~-y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~ 210 (677)
.+|++||||+.+.+.. .+ +.++..||+ |+++|+.+. .|+.+.+..|.+. +. ..+++|+|||++
T Consensus 41 ~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~--~~~~~~~~~~~~~----l~---~~~~pVlvHC~s 111 (156)
T 2f46_A 41 LGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR--DIQKHDVETFRQL----IG---QAEYPVLAYCRT 111 (156)
T ss_dssp HTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT--TCCHHHHHHHHHH----HH---TSCSSEEEECSS
T ss_pred CCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC--CCCHHHHHHHHHH----HH---hCCCCEEEECCC
Confidence 4699999999544322 11 134567999 999999874 6777777766543 33 247899999999
Q ss_pred CCChhHHHHHHHHHHhcCCCHHHHHHHHHhcC
Q 005774 211 GHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVR 242 (677)
Q Consensus 211 G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~R 242 (677)
|. ||++++++||+. .||+.++|++.++++.
T Consensus 112 G~-Rs~~l~al~l~~-~g~~~~~a~~~~~~~g 141 (156)
T 2f46_A 112 GT-RCSLLWGFRRAA-EGMPVDEIIRRAQAAG 141 (156)
T ss_dssp SH-HHHHHHHHHHHH-TTCCHHHHHHHHHHTT
T ss_pred CC-CHHHHHHHHHHH-cCCCHHHHHHHHHHcC
Confidence 99 999999999986 8999999999999874
No 52
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=99.14 E-value=1.8e-10 Score=120.51 Aligned_cols=83 Identities=16% Similarity=0.277 Sum_probs=69.2
Q ss_pred cchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHH-HHhcCCCHHHH
Q 005774 156 TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFL-MRSQSMSVAQA 234 (677)
Q Consensus 156 ~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYL-m~~~~~s~~eA 234 (677)
.+.++..|++|++||+.|+ .+|+.+.+..|++ |+.. ...+..|+|||.+|.||||+++|+|+ |...+++++++
T Consensus 174 ~e~~~~~Gl~Y~rlPi~D~-~aP~~e~id~fl~----~v~~-l~~~~~i~vHC~aG~GRTgt~ma~y~ll~~~~vs~eei 247 (314)
T 3mmj_A 174 QEVAEAAGMRYFRIAATDH-VWPTPENIDRFLA----FYRT-LPQDAWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDI 247 (314)
T ss_dssp HHHHHHTTCEEEEEEECTT-SCCCHHHHHHHHH----HHHT-CCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred HHHHHhCCCEEEEeCcCCC-CCCCHHHHHHHHH----HHHH-cCCCCCEEEECCCCCchHHHHHHHHHHHHCCCCCHHHH
Confidence 3567889999999999998 6999998888876 4443 23467999999999999999999995 45568999999
Q ss_pred HHHHHhcCCC
Q 005774 235 IKKFAEVRPP 244 (677)
Q Consensus 235 i~~~~~~Rp~ 244 (677)
++.++..-+.
T Consensus 248 i~r~~~lgg~ 257 (314)
T 3mmj_A 248 LYRQHEIGGF 257 (314)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHhCCc
Confidence 9999888753
No 53
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=99.05 E-value=7e-10 Score=115.74 Aligned_cols=141 Identities=18% Similarity=0.265 Sum_probs=96.6
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---------------
Q 005774 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (677)
Q Consensus 102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (677)
..||+.-.||..+..+. +.|+.+ .++..||-||+.. .|+....
T Consensus 77 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmlt~~~E~g~~kc~~YwP~~~~~~~~g~~~V~~~~~ 142 (284)
T 1fpr_A 77 KTYIASQGCLEATVNDF--------WQMAWQ------ENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGE 142 (284)
T ss_dssp CEEECBBCCCGGGHHHH--------HHHHHH------TTCCEEEECSCCBCSSSCSBCCCSCCBTEEEEETTEEEEEEEE
T ss_pred ceEEEeCCCChhhHHHH--------HHHHhc------cCCCEEEECCcceECccccchhhCCCCCCCeEECCEEEEEEEE
Confidence 46888888988766554 344443 5788899998642 2332110
Q ss_pred ----------h--h-------hCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 159 ----------L--K-------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 159 ----------~--~-------~~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
+ . ...|.++++ ..+|++.+++...+..|+..+..... ....+++|+|||.+|.||||++
T Consensus 143 ~~~~~~~~r~l~v~~~~~~~~~r~V~h~~~~~WpD~~vP~~~~~~l~~~~~v~~~~~-~~~~~~pivVHCsaGvGRTGtf 221 (284)
T 1fpr_A 143 HDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQE-SLPHAGPIIVHSSAGIGRTGTI 221 (284)
T ss_dssp CCCSSBCCEEEEEEESSCSSSCEEEEECCBCCSCTTSCCSCSHHHHHHHHHHHHHHT-TSTTCCCEEEESSBSSHHHHHH
T ss_pred EecCCEEEEEEEEEECCCCCceEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-hcCCCCcEEEEcCCCCcHHHHH
Confidence 0 0 112333333 56777544446788888887766432 1235689999999999999999
Q ss_pred HHHHHH----HhcC----CCHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 005774 219 IVHFLM----RSQS----MSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (677)
Q Consensus 219 i~aYLm----~~~~----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (677)
||++++ ...| .++.+|+..+|+.|+.++.+..|...++.
T Consensus 222 ia~~~~l~~l~~~g~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 268 (284)
T 1fpr_A 222 IVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYV 268 (284)
T ss_dssp HHHHHHHHHHHHHCTTSCCCHHHHHHHHHTTSTTSSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceecHHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 999865 3334 68999999999999999999888777654
No 54
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=99.03 E-value=5.7e-10 Score=114.45 Aligned_cols=144 Identities=22% Similarity=0.315 Sum_probs=98.8
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---------------
Q 005774 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (677)
Q Consensus 102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (677)
..||+.-.||..+..+. +.|+.+ .++..||-||... .|+..+.
T Consensus 52 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~~~~kc~~YwP~~~~~~~g~~~V~~~~~~ 117 (253)
T 1p15_A 52 DSYIASQGPLLHTIEDF--------WRMIWE------WKSCSIVMLTELEERGQEKCAQYWPSDGLVSYGDITVELKKEE 117 (253)
T ss_dssp TCEEEECCCCSSSHHHH--------HHHHHH------TTCCEEEECSCSCSSSSCCSCCCSCSSSCCEETTEECCSCCCE
T ss_pred ceEEEeCCCChHHHHHH--------hHhhee------CCCCEEEECCccccCCeehhhhhcCCCCceEECCEEEEEEEEE
Confidence 46899999987765543 344443 5788999998643 2221100
Q ss_pred -----------hh------hCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHH
Q 005774 159 -----------LK------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (677)
Q Consensus 159 -----------~~------~~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~ 220 (677)
+. ...|.++++ ..+|++.+++...+..|+..+...- ....+++|+|||.+|.||||++||
T Consensus 118 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~--~~~~~~pivVHCsaGvGRTGtfia 195 (253)
T 1p15_A 118 ECESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQ--QQSGNHPITVHCSAGAGRTGTFCA 195 (253)
T ss_dssp ECSSEEEEEEEEECSSCCEEEEEEEEEECCSCSSSCCSSSCSHHHHHHHHHHHT--TTTTSCCEEEESSSSSHHHHHHHH
T ss_pred ecCCEEEEEEEEEECCCCCceEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHHhh--hccCCCCEEEEcCCCCchhHHHHH
Confidence 00 112444444 4677754445566777777665431 134568999999999999999999
Q ss_pred HHHHHhc-----CCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhh
Q 005774 221 HFLMRSQ-----SMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (677)
Q Consensus 221 aYLm~~~-----~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (677)
+++|..+ ..++.+++..+|+.|+.++.+..|...++..-.+
T Consensus 196 ~~~~~~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~f~y~~~~~ 241 (253)
T 1p15_A 196 LSTVLERVKAEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQE 241 (253)
T ss_dssp HHHHHHHHHHHSCCCTTHHHHHHHTTSTTSSCSTTTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCccccCCHHHHHHHHHHHHH
Confidence 9887643 5789999999999999999998888877765443
No 55
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=99.02 E-value=1.6e-09 Score=113.32 Aligned_cols=94 Identities=20% Similarity=0.252 Sum_probs=72.4
Q ss_pred cEEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHH
Q 005774 164 IKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKK 237 (677)
Q Consensus 164 I~y~~ip-~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~~~s~~eAi~~ 237 (677)
|.++++. .+|++.+++.+.+..|+..+.+++... ..+++|+|||.+|.||||++||++++.. ...++.+++..
T Consensus 181 V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~-~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~ 259 (291)
T 2hc1_A 181 IRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRS-PGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHD 259 (291)
T ss_dssp EEEEEECCCCSSSCCSCHHHHHHHHHHHHHHHHHS-SCCCCEEEECSSSSHHHHHHHHHHHHHHHHHHCC-CCHHHHHHH
T ss_pred EEEeeecCCCCCCCCCCHHHHHHHHHHHHHHHhcC-CCCCCEEEEeCCCCchhHHHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 4555554 377755556788999999888776532 3467999999999999999999988753 24689999999
Q ss_pred HHhcCCCCcCCHHHHHHHHHH
Q 005774 238 FAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 238 ~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
+|+.|+.++.+..|...++..
T Consensus 260 lR~qR~~~Vqt~~Qy~fiy~~ 280 (291)
T 2hc1_A 260 LRLHRVHMVQTECQYVYLHQC 280 (291)
T ss_dssp HHTTSTTSSCCC-CHHHHHHH
T ss_pred HHHhCcccCCCHHHHHHHHHH
Confidence 999999999998877776543
No 56
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=98.99 E-value=1.8e-09 Score=102.59 Aligned_cols=114 Identities=20% Similarity=0.240 Sum_probs=86.0
Q ss_pred HHHHHcCCCeeEEEEcCCCCCCCC----cchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEE
Q 005774 132 HQLRVLGRKLGLVIDLTNTTRYYP----TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVH 207 (677)
Q Consensus 132 ~~~~~~~~~I~~VIdLt~~~~~y~----~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVH 207 (677)
..+.. .+++.||+++.+...-. .+.++..|++++.+|+ |. ..|+.+++.++++.+.+ ..|+.||||
T Consensus 34 ~~La~--~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~-Dv-~~~~~~~v~~~~~~i~~------~~G~dVLVn 103 (157)
T 3gxh_A 34 SLLKQ--AGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPV-DW-QNPKVEDVEAFFAAMDQ------HKGKDVLVH 103 (157)
T ss_dssp HHHHH--TTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCC-CT-TSCCHHHHHHHHHHHHH------TTTSCEEEE
T ss_pred HHHHH--cCCCEEEECCCcccccccccHHHHHHHcCCeEEEecC-CC-CCCCHHHHHHHHHHHHh------cCCCCEEEE
Confidence 44554 46788999885443211 2356678999999999 43 46777888888776643 234589999
Q ss_pred cCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHH
Q 005774 208 CTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFY 259 (677)
Q Consensus 208 C~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y 259 (677)
|.+| .|++.++++||+. .|+++++| +.+++.|| +.++..|+.+|..+.
T Consensus 104 nAgg-~r~~~l~~~~~~~-~G~~~~~A-~~v~~~rp-i~~~~~~w~~~~~~~ 151 (157)
T 3gxh_A 104 CLAN-YRASAFAYLYQLK-QGQNPNMA-QTMTPWND-ELAIYPKWQALLTEV 151 (157)
T ss_dssp CSBS-HHHHHHHHHHHHH-TTCCCCHH-HHTGGGTT-CGGGCHHHHHHHHHH
T ss_pred CCCC-CCHHHHHHHHHHH-cCCCHHHH-HHHHhhCc-ccCCcHHHHHHHHHH
Confidence 9977 5999999999975 89999999 99999999 777878777776553
No 57
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=98.98 E-value=2.8e-09 Score=112.89 Aligned_cols=89 Identities=21% Similarity=0.298 Sum_probs=69.4
Q ss_pred EecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHH----HhcC----CCHHHHHHHHHh
Q 005774 169 IQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM----RSQS----MSVAQAIKKFAE 240 (677)
Q Consensus 169 ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm----~~~~----~s~~eAi~~~~~ 240 (677)
...+|++.+++.+.+..|+..+...... ...+++|+|||.+|.||||++||++++ ...| +++.+++..+|+
T Consensus 208 ~~WpD~gvP~~~~~~l~fl~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~g~~~~vdv~~~v~~lR~ 286 (316)
T 3b7o_A 208 RTWPDHGVPSDPGGVLDFLEEVHHKQES-IMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRS 286 (316)
T ss_dssp CCCCSSSCCSSSHHHHHHHHHHHHHHHT-STTCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHHHT
T ss_pred cCcccCCCCCChHHHHHHHHHHHHHHhh-cCCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHH
Confidence 4567875444557888888877654332 235789999999999999999998875 2335 689999999999
Q ss_pred cCCCCcCCHHHHHHHHHH
Q 005774 241 VRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 241 ~Rp~~i~~~~~l~~L~~~ 258 (677)
.|+..+.+..|...++..
T Consensus 287 qR~~~Vqt~~Qy~fiy~~ 304 (316)
T 3b7o_A 287 QRSGMVQTEAQYRFIYMA 304 (316)
T ss_dssp TSTTCSCSHHHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHH
Confidence 999999999888777643
No 58
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=98.97 E-value=4e-09 Score=110.68 Aligned_cols=141 Identities=16% Similarity=0.234 Sum_probs=97.8
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC-------CCCCcch--hh-------------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT-------RYYPTSD--LK------------- 160 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~-------~~y~~~~--~~------------- 160 (677)
.||+.-.||..+..+. +.|+.+ .++..||-||... .|+..+. +.
T Consensus 102 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~e~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 167 (297)
T 1jln_A 102 AFIATQGPMINTVNDF--------WQMVWQ------EDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVTGVTECD 167 (297)
T ss_dssp SEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSBSSSBCCCCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEECCCCcchHHHH--------HHHHHh------cCCCEEEECCCcccCccchhhhcCCCCccCCCEEEEEEeeeecC
Confidence 5899999988766554 344443 5788999998643 2332110 00
Q ss_pred --------------hCCcEEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH
Q 005774 161 --------------KEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (677)
Q Consensus 161 --------------~~gI~y~~ip-~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~ 225 (677)
...|.++++. .+|++.+++...+..|+..+..... ....+++|+|||.+|.||||++||++++.
T Consensus 168 ~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfia~~~~~ 246 (297)
T 1jln_A 168 NYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRL-ASEGRGPVVVHCSAGIGRTGCFIATSIGC 246 (297)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEECCSCTTSSCSCSHHHHHHHHHHHHHHH-TCTTSCCEEEESSSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEecCCCeEEEEccccCCCCCCCCCCHHHHHHHHHHHHHHHh-hcCCCCCEEEEeCCCchhhHHHHHHHHHH
Confidence 1124444443 5787544456778888877765432 12456899999999999999999998753
Q ss_pred ----h-cCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005774 226 ----S-QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 226 ----~-~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
. ..+++.+++..+|+.|+..+.+..|...++..
T Consensus 247 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 284 (297)
T 1jln_A 247 QQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHHA 284 (297)
T ss_dssp HHHHHHSEECHHHHHHHHHHHSTTSSCSHHHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHHhCcCcCCcHHHHHHHHHH
Confidence 2 34689999999999999999999887777543
No 59
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=98.96 E-value=4.4e-09 Score=109.81 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=66.0
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHH----HHhc-CCCHHHHHHHHHhcCCC
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFL----MRSQ-SMSVAQAIKKFAEVRPP 244 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYL----m~~~-~~s~~eAi~~~~~~Rp~ 244 (677)
..+|++.+++.+.+..|+..+... ...+++|+|||.+|.||||++||+++ ++.. .+++.+++..+|+.|+.
T Consensus 182 ~WpD~gvP~~~~~~l~~i~~v~~~----~~~~~PivVHCsaGvGRTGtfia~d~~~~~l~~~~~v~~~~~v~~lR~qR~~ 257 (287)
T 2b49_A 182 AWPDHGVPDDSSDFLEFVNYVRSL----RVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAM 257 (287)
T ss_dssp CSCSSSCCSSCHHHHHHHHHHHHH----CCTTCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSTT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHh----ccCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhccc
Confidence 467775444567777777766543 33468999999999999999999864 3333 36899999999999999
Q ss_pred CcCCHHHHHHHHHH
Q 005774 245 GIYKNEYIEALYTF 258 (677)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (677)
.+.+..|...++..
T Consensus 258 ~Vqt~~Qy~fiy~~ 271 (287)
T 2b49_A 258 MVQTSSQYKFVCEA 271 (287)
T ss_dssp CSCSHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHH
Confidence 99999988887654
No 60
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=98.96 E-value=2.5e-09 Score=120.72 Aligned_cols=82 Identities=16% Similarity=0.313 Sum_probs=68.3
Q ss_pred cchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhc-CCCHHHH
Q 005774 156 TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-SMSVAQA 234 (677)
Q Consensus 156 ~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~-~~s~~eA 234 (677)
.+.++..|++|++||+.|+ ..|+.+++..|+..+.. ...+..|+|||.+|.||||+++++|+|.+. ++|+++|
T Consensus 491 ~e~~~~~Gi~Y~Ripi~D~-~aP~~e~id~fl~~v~~-----lp~~~~v~vHC~aG~GRTtT~mv~y~m~k~~~~s~~di 564 (629)
T 3f41_A 491 QQLVEKNGLHYYRIAATDH-IWPSAANIDEFINFTRT-----MPANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDI 564 (629)
T ss_dssp HHHHHHTTCEEEEEEECTT-SCCCHHHHHHHHHHHHH-----SCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred HHHHHhCCCEEEEeCCCCC-CCCCHHHHHHHHHHHHh-----cCCCCCEEEeCCCCCchHHHHHHHHHHHHcCCCCHHHH
Confidence 3467889999999999997 79999999999775543 234578999999999999999999977644 7899999
Q ss_pred HHHHHhcCC
Q 005774 235 IKKFAEVRP 243 (677)
Q Consensus 235 i~~~~~~Rp 243 (677)
|+.....-+
T Consensus 565 i~rq~~lgg 573 (629)
T 3f41_A 565 LSRQYLLGG 573 (629)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHhhCc
Confidence 998777543
No 61
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=98.95 E-value=4.9e-09 Score=109.46 Aligned_cols=140 Identities=19% Similarity=0.289 Sum_probs=96.3
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc--h-------------
Q 005774 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS--D------------- 158 (677)
Q Consensus 102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~--~------------- 158 (677)
..||+.-.||..+..+. +.|+.+ .++..||-||... .|+..+ .
T Consensus 90 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~g~~~V~~~~~~~ 155 (286)
T 2ooq_A 90 RHYIATQGPMQETVKDF--------WRMIWQ------ENSASIVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEP 155 (286)
T ss_dssp TCEEEECCCCTTTHHHH--------HHHHHH------HTCCEEEECSCSEETTEECSCCCSCSSEEEEBTEEEEEEEEEE
T ss_pred ccEEEEcCCCcchHHHH--------HHHHHh------cCCCEEEECCCceeCCccccccccCCCccEECCEEEEEEEEEe
Confidence 36888888987765553 344543 4688899998642 233211 0
Q ss_pred ----------hhhCC------cEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHH
Q 005774 159 ----------LKKEG------IKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (677)
Q Consensus 159 ----------~~~~g------I~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (677)
+...| |.++++ ..+|++.+++...+..|+..+.... ...+++|+|||.+|.||||++||+
T Consensus 156 ~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfiai 232 (286)
T 2ooq_A 156 LAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLN---PPEAGPIVVHCSAGAGRTGCFIAI 232 (286)
T ss_dssp CSSEEEEEEEEEETTSCCCEEEEEEEECSCCTTCCCSCSHHHHHHHHHHHHHS---CTTSCCEEEECSSSSHHHHHHHHH
T ss_pred cCCEEEEEEEEeeccCCCCeEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHhc---CCCCCcEEEEeCCCCcHHHHHHHH
Confidence 11111 344444 3567754445567777777664421 235689999999999999999999
Q ss_pred HHHHh-----cCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005774 222 FLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 222 YLm~~-----~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
++|.. ...++.+++..+|+.|+..+.+..|...++..
T Consensus 233 ~~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 274 (286)
T 2ooq_A 233 DTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDA 274 (286)
T ss_dssp HHHHHHHHHHSEECHHHHHHHHHHHSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCHHHHHHHHHH
Confidence 88753 24689999999999999999999988887754
No 62
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=98.93 E-value=1.1e-08 Score=106.92 Aligned_cols=141 Identities=18% Similarity=0.249 Sum_probs=98.2
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----h----------
Q 005774 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD----L---------- 159 (677)
Q Consensus 102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~----~---------- 159 (677)
..||+.-.||..+..+. +.|+.+ .++..||-||... .|+.... +
T Consensus 79 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~g~~~V~~~~~ 144 (288)
T 4grz_A 79 KTYIASQGCLEATVNDF--------WQMAWQ------ENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGE 144 (288)
T ss_dssp CCEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCTTCEEEETTEEEEEEEE
T ss_pred ceeEEcCCCchHHHHHH--------HHHHHH------hCCCEEEECCchhhCCcccccccCCCCCCceEecCEEEEEEEE
Confidence 47899999998876654 344543 5788899998631 2332110 0
Q ss_pred ----------------h----hCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005774 160 ----------------K----KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (677)
Q Consensus 160 ----------------~----~~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (677)
. ..-|.++++ ..+|++.+++...+..|+..+...... ...+++|+|||.+|.||||++
T Consensus 145 ~~~~~~~~r~l~v~~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaGvGRTGtf 223 (288)
T 4grz_A 145 HDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHSSAGIGRTGTI 223 (288)
T ss_dssp EECSSEEEEEEEEEETTCTTCCEEEEEEEECSCCTTSCCSSSHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSHHHHHH
T ss_pred EecCCeEEEEEEEEecCCCCceEEEEEEEeCCcCcCCcccChHHHHHHHHHHHHHHhh-cCCCCcEEEEeCCCCcHHHHH
Confidence 0 011333333 356775444668888888888765442 234689999999999999999
Q ss_pred HHHHHHHh----cC----CCHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 005774 219 IVHFLMRS----QS----MSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (677)
Q Consensus 219 i~aYLm~~----~~----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (677)
||++++.. .| +++.+++..+|+.|+.++.+..|...++.
T Consensus 224 iaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 270 (288)
T 4grz_A 224 IVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYV 270 (288)
T ss_dssp HHHHHHHHHHHHHCTTSCCCHHHHHHHHHTTSTTCSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHhcccccCCHHHHHHHHH
Confidence 99988632 24 78999999999999999999988777654
No 63
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A
Probab=98.93 E-value=7.3e-09 Score=108.62 Aligned_cols=137 Identities=24% Similarity=0.378 Sum_probs=92.7
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc--hhh------------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS--DLK------------ 160 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~--~~~------------ 160 (677)
.||+.-.||.++..+. +.|+.+ .++..||-||... .|+..+ ...
T Consensus 93 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~~g~~~V~~~~~~ 158 (295)
T 2gjt_A 93 EYIATQGPLPETRNDF--------WKMVLQ------QKSQIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEE 158 (295)
T ss_dssp CEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCSSSSCEEETTEEEEEEEEE
T ss_pred cEEEecCCCccHHHHH--------HHHHHh------cCCCEEEEccccccCCeecccccCCCCCCceEEeeEEEEEEEEE
Confidence 7899999988766554 344443 5789999999642 233211 110
Q ss_pred -----------------hCCcEEEE-EecCCCCCCCCH---HHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHH
Q 005774 161 -----------------KEGIKHVK-IQCKGRDAVPDN---ASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMI 219 (677)
Q Consensus 161 -----------------~~gI~y~~-ip~~d~~~~P~~---e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li 219 (677)
...|.+++ ...+|+ .+|+. +.+..|+..+.+.. ...+++|+|||.+|.||||++|
T Consensus 159 ~~~~~~~r~l~l~~~~~~r~V~h~~y~~WPD~-gvP~~~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfi 234 (295)
T 2gjt_A 159 EQDDWACRHFRINYADEMQDVMHFNYTAWPDH-GVPTANAAESILQFVHMVRQQA---TKSKGPMIIHCSAGVGRTGTFI 234 (295)
T ss_dssp ECSSEEEEEEEEEETTEEEEEEEEEECCCCCS-SSCCHHHHHHHHHHHHHHHHHH---HHCCSCEEEESSSSSHHHHHHH
T ss_pred eccceEEEEEEEEECCcccEEEEEeecCCCCC-CCCCcccHHHHHHHHHHHHHhh---ccCCCcEEEEECCCCccchHHH
Confidence 01122333 346777 47764 35556665554332 2357899999999999999999
Q ss_pred HH-HHHHh----cCCCHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 005774 220 VH-FLMRS----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (677)
Q Consensus 220 ~a-YLm~~----~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (677)
|+ +||.. ...++.+++..+|+.|+..+.+..|...++.
T Consensus 235 aid~ll~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 277 (295)
T 2gjt_A 235 ALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQ 277 (295)
T ss_dssp HHHHHHHHHHHCSEECHHHHHHHHHTTSTTSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHhhccccCCCHHHHHHHHH
Confidence 88 55543 2468999999999999999999888777654
No 64
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=98.92 E-value=8.6e-09 Score=108.52 Aligned_cols=141 Identities=18% Similarity=0.271 Sum_probs=94.9
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC-------CCCCcch--hh-------------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT-------RYYPTSD--LK------------- 160 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~-------~~y~~~~--~~------------- 160 (677)
.||+.-.||..+..+. +.|+.+ .++..||-||... .|+..+. +.
T Consensus 110 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~e~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 175 (305)
T 2cjz_A 110 VYIATQGPIVSTVADF--------WRMVWQ------EHTPIIVMITNIEEMNEKCTEYWPEEQVAYDGVEITVQKVIHTE 175 (305)
T ss_dssp SEEEEECCCGGGHHHH--------HHHHHH------HTCCEEEEEC---------CCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEeCCCccccHHHH--------HHHHHh------cCCCEEEEccCccccccchhhhcCCCCceECCEEEEEEEEEecC
Confidence 5889899988776654 345543 3688899888643 2322110 10
Q ss_pred --------------hCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH
Q 005774 161 --------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (677)
Q Consensus 161 --------------~~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~ 225 (677)
..-|.++++ ..+|++.+++...+..|+..+..........+++|+|||.+|.||||++||++++.
T Consensus 176 ~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l 255 (305)
T 2cjz_A 176 DYRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSICC 255 (305)
T ss_dssp SEEEEEEEEEC--CEEEEEEEEECCCCSSCCGGGHHHHHHHHHHHHHHHHHTCSSCCCEEEEESSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEcCcceEEEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCEEEEeCCCcchhHHHHHHHHHH
Confidence 011333333 25677533356677788777765333234457899999999999999999998763
Q ss_pred -----hcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 005774 226 -----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (677)
Q Consensus 226 -----~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (677)
....++.+++..+|+.|+..+.+..|...++.
T Consensus 256 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~ 292 (305)
T 2cjz_A 256 QQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHH 292 (305)
T ss_dssp HHHHHHSCBCHHHHHHHHHHHSTTSSCSHHHHHHHHH
T ss_pred HHHHhcCCccHHHHHHHHHHhCcccCCCHHHHHHHHH
Confidence 34579999999999999999999888877654
No 65
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=98.91 E-value=9.4e-09 Score=108.43 Aligned_cols=139 Identities=18% Similarity=0.317 Sum_probs=94.2
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCC--------CCCCCcch-----hhh--------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNT--------TRYYPTSD-----LKK-------- 161 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~--------~~~y~~~~-----~~~-------- 161 (677)
.||+.-.||..+..+. +.|+.+ .++..||-||.. .+|+..+. +..
T Consensus 98 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~YwP~~~~~~~~~g~~~V~~~~~ 163 (309)
T 2p6x_A 98 AYIATQGPLSTTLLDF--------WRMIWE------YSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAE 163 (309)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCTTSCCEEETTEEEEEEEE
T ss_pred eEEEeCCCChhHHHHH--------HHHHHc------CCCCEEEECCCcccCccccccccCCCCCCCceEEcCEEEEEEEE
Confidence 6899999998776654 345543 578999999864 12332110 100
Q ss_pred -------------------CCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHH
Q 005774 162 -------------------EGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (677)
Q Consensus 162 -------------------~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (677)
.-|.++++ ..+|++.+++.+.+..|+..+..+. ...+++|+|||.+|.||||++||+
T Consensus 164 ~~~~~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfiai 240 (309)
T 2p6x_A 164 KRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ---EDDSVPICIHCSAGCGRTGVICAI 240 (309)
T ss_dssp EECSSEEEEEEEEEETTEEEEEEEEEECCCCCTTCGGGGHHHHHHHHHHHHHC---CSCSSCEEEECSSSSSHHHHHHHH
T ss_pred EecCCEEEEEeeecCCCCCeEEEEEeeeccccCCCCCCHHHHHHHHHHHHHHh---ccCCCcEEEEeCCCCcHHHHHHHH
Confidence 11223332 3567753334667777776665432 235689999999999999999998
Q ss_pred HH----HHhcC----CCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005774 222 FL----MRSQS----MSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 222 YL----m~~~~----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
+. +.... +++.+++..+|+.|+..+.+..|...++..
T Consensus 241 d~~~~~l~~~~~~~~~dv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 285 (309)
T 2p6x_A 241 DYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNA 285 (309)
T ss_dssp HHHHHHHHTTCCCTTCCHHHHHHHHHTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCccCHHHHHHHHHHhCccccCCHHHHHHHHHH
Confidence 64 33322 689999999999999999999887777643
No 66
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=98.90 E-value=1.4e-08 Score=107.72 Aligned_cols=141 Identities=16% Similarity=0.259 Sum_probs=96.3
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc----hh-----------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS----DL----------- 159 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~----~~----------- 159 (677)
+||+.-.||..+..+. +.|+.+ .++..||-||... .|+... .+
T Consensus 114 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kC~~YWP~~~~~~~~g~~~V~~~~~~ 179 (320)
T 2i75_A 114 QYIACQGPLPHTCTDF--------WQMTWE------QGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEE 179 (320)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCCTTCEEEETTEEEEECCCB
T ss_pred eEEEEcCCchhhHHHH--------HHHHHh------cCCCEEEEccccccCCcccccccCCCCCCceEECCEEEEEEEee
Confidence 4888888888766554 344443 5788899998642 233210 00
Q ss_pred ------------h------hCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHH
Q 005774 160 ------------K------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (677)
Q Consensus 160 ------------~------~~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~ 220 (677)
. ...|.++++ ..+|++.+++...+..|+..+.... ...+++|+|||.+|.||||++||
T Consensus 180 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfia 256 (320)
T 2i75_A 180 GNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKR---AGKEEPVVVHCSAGIGRTGVLIT 256 (320)
T ss_dssp CCSSEEEEEEEEEETTTTEEEEEEEEEECCCCSSSSCSCTHHHHHHHHHHHHHH---TTCCSCEEEECSSSSSHHHHHHH
T ss_pred ecCCEEEEEEEEEEcCCCCceEEEEeeecCCCCCCCCCchHHHHHHHHHHHHHh---ccCCCCEEEEcCCCCcHHHHHHH
Confidence 0 012344443 4677754445677888887765532 23468999999999999999998
Q ss_pred HHH----HHhc-CCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHh
Q 005774 221 HFL----MRSQ-SMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYH 260 (677)
Q Consensus 221 aYL----m~~~-~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~ 260 (677)
+.. +... .+++.+++..+|+.|+.++.+..|...++..-.
T Consensus 257 id~~l~~l~~~~~v~~~~~v~~lR~qR~~~Vqt~~Qy~fiy~~~l 301 (320)
T 2i75_A 257 METAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAIL 301 (320)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHTTSTTCSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCcCCCCCHHHHHHHHHHHH
Confidence 743 3333 368999999999999999999999888776533
No 67
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=98.89 E-value=7e-09 Score=109.41 Aligned_cols=140 Identities=20% Similarity=0.306 Sum_probs=93.9
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC-------CCCCcch--hh-------------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT-------RYYPTSD--LK------------- 160 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~-------~~y~~~~--~~------------- 160 (677)
.||+...||..+..+. +.|+.+ .++..||-||... .|+..+. +.
T Consensus 113 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 178 (309)
T 1zc0_A 113 VYIATQGPMPNTVSDF--------WEMVWQ------EEVSLIVMLTQLREGKEKCVHYWPTEEETYGPFQIRIQDMKECP 178 (309)
T ss_dssp SEEEEECCCGGGHHHH--------HHHHHH------TTCCEEEEECCTTC----CCCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEecCcccccHHHH--------HHHHHh------cCCCEEEECCCccccccccccccCCCCceEccEEEEEEEEEecC
Confidence 6888888988766554 344443 5788899998643 2322110 10
Q ss_pred --------------hCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH
Q 005774 161 --------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (677)
Q Consensus 161 --------------~~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~ 225 (677)
...|.++++ ..+|++.+++...+..|+..+.+.. .....+++|+|||.+|.||||++||++++.
T Consensus 179 ~~~~r~l~v~~~~~~r~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~-~~~~~~~PIvVHCsaGvGRTGtfiai~~~l 257 (309)
T 1zc0_A 179 EYTVRQLTIQYQEERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESP-ETAAHPGPIVVHCSAGIGRTGCFIATRIGC 257 (309)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEECSCCTTSCCSCHHHHHHHHHHHHTSC-CCCSSCCCEEEEESSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEecCCceEEEEEEEecccCCCCCCCHHHHHHHHHHHHHHH-hhcCCCCCEEEEeCCCcchhHHHHHHHHHH
Confidence 011333333 3467754445666666666554311 112356899999999999999999998763
Q ss_pred -----hcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 005774 226 -----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (677)
Q Consensus 226 -----~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (677)
...+++.+++..+|+.|+..+.+..|...++.
T Consensus 258 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 294 (309)
T 1zc0_A 258 QQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHH 294 (309)
T ss_dssp HHHHHHSEECHHHHHHHHHHHSTTCSCCHHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 23579999999999999999999988777754
No 68
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=98.88 E-value=5.4e-09 Score=117.94 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=67.9
Q ss_pred chhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhc--CCCHHHH
Q 005774 157 SDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ--SMSVAQA 234 (677)
Q Consensus 157 ~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~--~~s~~eA 234 (677)
+.++..|+.|++||+.|+ ..|+.+++..|++.+.. ...+..|+|||.+|.||||+++++|+|.+. ++++++|
T Consensus 194 el~~~~Gl~Y~Ripi~D~-~~P~~e~id~fl~~v~~-----l~~~~~i~vHC~AG~GRTgT~m~~y~m~k~~~~~s~~di 267 (629)
T 3f41_A 194 EMVKQHGANYFRLTLQDH-FRPDDPDVDKFLEFYKS-----LPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDI 267 (629)
T ss_dssp HHHHTTTCEEEEEEECTT-SCCCHHHHHHHHHHHHT-----SCTTCEEEEECSSSSHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred HHHHhCCCeEEEccCCCC-CCCCHHHHHHHHHHHHh-----cCCCCCEEEECCCCCCHHHHHHHHHHHHhccCCCCHHHH
Confidence 457889999999999997 79999999998764433 234578999999999999999999988775 6899999
Q ss_pred HHHHHhcCC
Q 005774 235 IKKFAEVRP 243 (677)
Q Consensus 235 i~~~~~~Rp 243 (677)
|...+..-+
T Consensus 268 I~Rq~~lgg 276 (629)
T 3f41_A 268 IQRQKLIGI 276 (629)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHhcC
Confidence 988776643
No 69
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}
Probab=98.87 E-value=1.8e-08 Score=107.05 Aligned_cols=88 Identities=22% Similarity=0.287 Sum_probs=68.5
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhc-------ccCCceEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHH
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQ-------KHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKF 238 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~-------~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~~~s~~eAi~~~ 238 (677)
.+|+|.+++...+..|+..+....... ...+++|+|||.+|.||||++||++++.. ...++.+++..+
T Consensus 215 WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~l 294 (325)
T 2bzl_A 215 WPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHNEKVEVPMMLRLL 294 (325)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHHHTGGGTTSCCCCCCEEEESSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccccCCCCCEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 567765556677788877765543211 23468999999999999999999988753 347899999999
Q ss_pred HhcCCCCcCCHHHHHHHHHH
Q 005774 239 AEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 239 ~~~Rp~~i~~~~~l~~L~~~ 258 (677)
|+.|+..+.+..|...+++.
T Consensus 295 R~qR~~~Vqt~~QY~Fiy~~ 314 (325)
T 2bzl_A 295 REQRMFMIQTIAQYKFVYQV 314 (325)
T ss_dssp HTTSTTCSCSHHHHHHHHHH
T ss_pred HHhcccCCCCHHHHHHHHHH
Confidence 99999999999888877654
No 70
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=98.84 E-value=1.4e-08 Score=106.74 Aligned_cols=139 Identities=18% Similarity=0.263 Sum_probs=95.7
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----------------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (677)
.||+...||..+..+. +.|+.+ .++..||-||... .|+..+.
T Consensus 99 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 164 (302)
T 1yfo_A 99 KFIAAQGPKEETVNDF--------WRMIWE------QNTATIVMVTNLKERKECKCAQYWPDQGCWTYGNVRVSVEDVTV 164 (302)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCSSSEEEETTEEEEEEEEEE
T ss_pred eEEEEhhcchhhHHHH--------HHHHhc------cCCCEEEEccccccCCeeecceeccCCCCeEeccEEEEEEEEEE
Confidence 6889999988766554 344443 5788899998642 2332110
Q ss_pred ----------hhh----------CCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHH
Q 005774 159 ----------LKK----------EGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (677)
Q Consensus 159 ----------~~~----------~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~ 217 (677)
+.. .-|.++++ ..+|++.+++...+..|+..+.... ...+++|+|||.+|.||||+
T Consensus 165 ~~~~~~r~l~v~~~~~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGt 241 (302)
T 1yfo_A 165 LVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACN---PQYAGAIVVHCSAGVGRTGT 241 (302)
T ss_dssp CSSEEEEEEEEEC---------CEEEEEEEECCCCSSSCCSCSHHHHHHHHHHHHHS---CTTSCCEEEECSSSSHHHHH
T ss_pred cCCcEEEEEEEEEecccCCCCcceEEEEEeecccCCCCcCCCHHHHHHHHHHHHHhc---cCCCCCEEEECCCCCcHHHH
Confidence 011 11333333 3567754445667888887765431 23468999999999999999
Q ss_pred HHHHHHHH-----hcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005774 218 MIVHFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 218 li~aYLm~-----~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
+||++++. ....++.+++..+|+.|+..+.+..|...++..
T Consensus 242 fiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 287 (302)
T 1yfo_A 242 FVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQA 287 (302)
T ss_dssp HHHHHHHHHHHHHSSEECHHHHHHHHTTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence 99987753 224699999999999999999999888777654
No 71
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=98.81 E-value=3.2e-08 Score=105.79 Aligned_cols=144 Identities=19% Similarity=0.311 Sum_probs=99.6
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---h-----------
Q 005774 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---L----------- 159 (677)
Q Consensus 102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---~----------- 159 (677)
..||+.-.||..+..+. +.|+.+ .++..||-||... .|+..+. +
T Consensus 112 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kC~~YWP~~~~~~~g~~~V~~~~~~ 177 (342)
T 3i36_A 112 KDFIATQGPLPNTLKDF--------WRMVWE------KNVYAIVMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEV 177 (342)
T ss_dssp TSEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSBSSSSBCSCCCSCCSSCEEETTEEEEEEEEE
T ss_pred ceEEEECCCChhhHHHH--------HHHHHH------cCCcEEEecCcccccCccccccccccCCCeeeCCEEEEEEEEE
Confidence 36899999988766554 344443 5788999998631 2332111 0
Q ss_pred ------------------hhCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHH
Q 005774 160 ------------------KKEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (677)
Q Consensus 160 ------------------~~~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~ 220 (677)
+..-|.++++ ..+|+|.+++...+..|+..+.++... ...+++|+|||.+|.||||++||
T Consensus 178 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~f~~~v~~~~~~-~~~~~PiVVHCSAGvGRTGtfia 256 (342)
T 3i36_A 178 VLPEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQ-IPPESPILVHCSAGVGRTGTFIA 256 (342)
T ss_dssp ECSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSSCSCSHHHHHHHHHHHHHHTT-SCSSCCEEEESSSSSHHHHHHHH
T ss_pred ecCCeEEEEEEEEecCCCceEEEEEEeecCcCcCCCCCCHHHHHHHHHHHHHHHHh-CCCCCCEEEEcCCCChHHHHHHH
Confidence 0011333333 346775444667788888887776542 23568999999999999999999
Q ss_pred HHHHH-----hcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHh
Q 005774 221 HFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYH 260 (677)
Q Consensus 221 aYLm~-----~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~ 260 (677)
..++- ....++.+++..+|+.|+..+.+..|...++....
T Consensus 257 id~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fiy~~vl 301 (342)
T 3i36_A 257 IDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVL 301 (342)
T ss_dssp HHHHHHHHHHHSEECHHHHHHHHHTTSTTSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCccccCCHHHHHHHHHHHH
Confidence 87663 33568999999999999999999999888765433
No 72
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S
Probab=98.81 E-value=8.2e-09 Score=111.99 Aligned_cols=100 Identities=15% Similarity=0.259 Sum_probs=75.9
Q ss_pred CcEEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHhc-----ccCCceEEEEcCCCCChhHHHHHHHHHHhc-CCCHHHHH
Q 005774 163 GIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQ-----KHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-SMSVAQAI 235 (677)
Q Consensus 163 gI~y~~ip-~~d~~~~P~~e~i~~f~~~v~~fi~~~-----~~~~~~VlVHC~~G~~RTG~li~aYLm~~~-~~s~~eAi 235 (677)
.|.+++++ .+|++.+++.+.+..|+..+....... ....++|+|||.+|.||||++||+++|... .+++.+++
T Consensus 270 ~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~PivVHCsAGvGRTGtfiaidll~~~~~vdv~~~v 349 (383)
T 1g4w_R 270 TIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVR 349 (383)
T ss_dssp EEEEEEECSCCTTSCCSSHHHHHHHHHHHHTSCCCCCTTCSCTTSSCCEEESSSSSHHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred EEEEEeeCCcCCcCCCCCHHHHHHHHHHHHHHHhhhccccccCCCCCEEEEeCcCCcHHHHHHHHHHHHhCCCCCHHHHH
Confidence 35666666 788864445667777776654432110 012468999999999999999999999865 37999999
Q ss_pred HHHHhcCCC-CcCCHHHHHHHHHHHhhc
Q 005774 236 KKFAEVRPP-GIYKNEYIEALYTFYHEK 262 (677)
Q Consensus 236 ~~~~~~Rp~-~i~~~~~l~~L~~~y~~~ 262 (677)
..+|+.|+. .+.+..|...+++.....
T Consensus 350 ~~lR~qR~g~~Vqt~~Qy~fl~~~~~~l 377 (383)
T 1g4w_R 350 ADFRDSRNNRMLEDASQFVQLKAMQAQL 377 (383)
T ss_dssp HHHHHHTCTTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999995 999999999998776544
No 73
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A
Probab=98.78 E-value=5.6e-08 Score=103.01 Aligned_cols=86 Identities=22% Similarity=0.174 Sum_probs=64.9
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCC
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPP 244 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~~~s~~eAi~~~~~~Rp~ 244 (677)
..+|++.+++...+..|+..+... ....+++|+|||.+|.||||++||++++.. ...++.+++..+|+.|+.
T Consensus 218 ~WPD~gvP~~~~~~l~~i~~~~~~---~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~ 294 (320)
T 2h4v_A 218 QWPDMGVPEYALPVLTFVRRSSAA---RMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNY 294 (320)
T ss_dssp CCCSSSSCSCSHHHHHHHHHHHHT---CCTTCCCEEEESSSSSHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTTTSTT
T ss_pred CCCcCCCCCCHHHHHHHHHHHHhh---ccCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhCcc
Confidence 456775444545566666544321 123468999999999999999999987753 347999999999999999
Q ss_pred CcCCHHHHHHHHHH
Q 005774 245 GIYKNEYIEALYTF 258 (677)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (677)
.+.+..|...++..
T Consensus 295 ~Vqt~~QY~Fiy~~ 308 (320)
T 2h4v_A 295 LVQTEEQYIFIHDA 308 (320)
T ss_dssp SSCSHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHH
Confidence 99999888887654
No 74
>3qwu_A DNA ligase; structural genomics, PSI-2, midwest center for structural GE MCSG; HET: DNA ADN; 2.35A {Aquifex aeolicus}
Probab=98.77 E-value=4.1e-08 Score=104.39 Aligned_cols=162 Identities=15% Similarity=0.134 Sum_probs=98.9
Q ss_pred CCCCCCcccccchhchhhhccCCeEEEEcccceEEEEEEECCEEEEEeCCCccccc-cCcCCCcCCCCcccccCCCCeee
Q 005774 343 MQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRV-QMRFPCRNSNEGLGEKTHHFTLL 421 (677)
Q Consensus 343 ~~FPGsqPVsl~r~nl~~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v-~~~FP~~~~~~~~~~~~~~~tlL 421 (677)
.+||--.-+-+-..-+.......|+|+||.||.++-++..+++++.++|.+.+..- +-++|...++ .+. ..+.+.+|
T Consensus 52 ~GyP~I~R~~~L~~~i~~~f~~~~~veEKLDG~NVRi~~~dG~ilA~TRgG~icP~tT~r~~~~~~~-~f~-~~~P~l~L 129 (370)
T 3qwu_A 52 WGYPHIGRIFLLETGLREQFEAPFWVEEKVDGYNTRIFKYGDNYYALSRGGFICPFTTDRLPDLIDL-RIL-DENPDLVI 129 (370)
T ss_dssp CCCCCCEEESCHHHHHHHHCSSCEEEEEECSSEEEEEEEETTEEEEECTTSCBCHHHHHHHHHHCCC-HHH-HHCTTEEE
T ss_pred CCCCChhhhhchhhhhhhcCCCcEEEEEeeCCeEEEEEEECCEEEEEcCCCcccCcchhhhhhhcCc-hhh-hcCCCeEE
Confidence 56776554443334444444579999999999777777777889999999874200 1122222111 111 11468999
Q ss_pred eEEEEEecCC----C--CCCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCc
Q 005774 422 DGEMIIDKLP----D--SRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPF 495 (677)
Q Consensus 422 DGElV~d~~~----~--~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf 495 (677)
||||+.-..+ . .......|+||||... ....-+|+.+|++++++.-+ |.
T Consensus 130 dGEl~g~~npy~~~s~~y~~~~i~F~VFDV~d~--~~~~~L~~~eR~~ll~~~~l-p~---------------------- 184 (370)
T 3qwu_A 130 CAEVAGPENPYIEESPPYVKEDVQLFVFDFMKK--NEQGFLSQEEKMELIEKYNL-PH---------------------- 184 (370)
T ss_dssp EEEEECTTCSSCSCCCTTCCSSCEEEEEEEEET--TCCSCCCHHHHHHHHHHHTC-CB----------------------
T ss_pred EEEEEcCCCCccccCCcccccCceEEEEeCccc--cCCCcCCHHHHHHHHHHCCC-CC----------------------
Confidence 9999986421 1 1123579999999984 34566899999999888532 11
Q ss_pred EEEecceEEch--hHHHHHHHhcccccCCCceEEEEeCC
Q 005774 496 RVRRKDFWLLS--TVNKLLKEFIPKLSHDADGLVFQGWD 532 (677)
Q Consensus 496 ~i~~K~~~~~~--~~~~ll~~~~~~l~h~~DGLIf~p~~ 532 (677)
|..-..+++. +.+.|.+-+......+.||+|++..+
T Consensus 185 -V~ii~~~~~~~~~~~~l~~~l~~l~~~g~EGVVlK~~~ 222 (370)
T 3qwu_A 185 -VEILGRFTASEEGIKKIKEILKRFNEEGREGVVFKEDS 222 (370)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred -ccEEEEeCCCCCCHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 1111223334 34444332222234789999999976
No 75
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=98.75 E-value=3.5e-08 Score=103.84 Aligned_cols=87 Identities=20% Similarity=0.267 Sum_probs=65.7
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHH----HHHhcC----CCHHHHHHHHHhcC
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHF----LMRSQS----MSVAQAIKKFAEVR 242 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aY----Lm~~~~----~s~~eAi~~~~~~R 242 (677)
.+|++.+++...+..|+..+.+.-. ....+++|+|||.+|.||||++||++ +|...+ +++.+++..+|+.|
T Consensus 185 WpD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR 263 (304)
T 2cm2_A 185 WPDFGVPESPASFLNFLFKVRESGS-LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFR 263 (304)
T ss_dssp CCSSSCCSSSHHHHHHHHHHHHHTT-TSTTSBCEEEESSSSSSHHHHHHHHHHHHHHHHHSSCGGGCCHHHHHHHHTTTS
T ss_pred cCcCCCCCCHHHHHHHHHHHHHHhh-ccCCCCcEEEEcCcCCchhhHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHhc
Confidence 3677544456777777776644211 12346899999999999999999875 556554 79999999999999
Q ss_pred CCCcCCHHHHHHHHHH
Q 005774 243 PPGIYKNEYIEALYTF 258 (677)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (677)
+.++.+..|...++..
T Consensus 264 ~~~Vqt~~Qy~fiy~a 279 (304)
T 2cm2_A 264 MGLIQTADQLRFSYLA 279 (304)
T ss_dssp TTCSCSHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHH
Confidence 9999999888777543
No 76
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.73 E-value=3.7e-08 Score=103.63 Aligned_cols=85 Identities=22% Similarity=0.326 Sum_probs=67.0
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHH----HHHhc----CCCHHHHHHHHHhcC
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHF----LMRSQ----SMSVAQAIKKFAEVR 242 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aY----Lm~~~----~~s~~eAi~~~~~~R 242 (677)
.+|++.+++.+.+..|+..+.... ...+++|+|||.+|.||||++||++ ++..+ .+++.+++..+|+.|
T Consensus 199 WpD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfiaid~~~~~ll~~~~~~~vdv~~~v~~lR~qR 275 (303)
T 2oc3_A 199 WPDRGVPSSPDHMLAMVEEARRLQ---GSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQR 275 (303)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHHH---CSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHHHHHTTS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh---cCCCCcEEEEECCCCcceeEEEeHHHHHHHHHhcccCCCcCHHHHHHHHHhhc
Confidence 567754445677777877665532 2346899999999999999999998 66532 468999999999999
Q ss_pred CCCcCCHHHHHHHHHH
Q 005774 243 PPGIYKNEYIEALYTF 258 (677)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (677)
+..+.+..|...++..
T Consensus 276 ~~~Vqt~~Qy~fiy~~ 291 (303)
T 2oc3_A 276 PAAVQTEEQYRFLYHT 291 (303)
T ss_dssp TTSSCSHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 9999999988887654
No 77
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=98.73 E-value=9.1e-08 Score=100.80 Aligned_cols=143 Identities=15% Similarity=0.206 Sum_probs=97.3
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCC--------CCCCCcch----hhh--------
Q 005774 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNT--------TRYYPTSD----LKK-------- 161 (677)
Q Consensus 102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~--------~~~y~~~~----~~~-------- 161 (677)
..||+.-.||..+..+. +.|+.+ .++..||-||.. ..|+..+. +..
T Consensus 113 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~YWP~~~~~~~~g~~~V~~~~~ 178 (307)
T 3s3e_A 113 REFIVTQGPLHSTRDDF--------WRMCWE------SNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILND 178 (307)
T ss_dssp TSEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCSSSSCEEETTEEEEEEEE
T ss_pred ceeEEecCCChhhHHHH--------HHHHHH------hCCcEEEEcCCcccCCcccccccCCCCCCCEEEeeEEEEEEEE
Confidence 36899999988766554 344443 578899999863 12332110 000
Q ss_pred -------------------CCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHH
Q 005774 162 -------------------EGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (677)
Q Consensus 162 -------------------~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (677)
.-|.++++ ..+|++.+++...+..|+..+.+.. ....++|+|||.+|.||||++||.
T Consensus 179 ~~~~~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~fi~~v~~~~---~~~~~PIvVHCsaGvGRTGtfiai 255 (307)
T 3s3e_A 179 SHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRI---GAEQRPIVVHCSAGVGRSGTFITL 255 (307)
T ss_dssp EECSSEEEEEEEEEETTEEEEEEEEEECCCCSSSCCSSTHHHHHHHHHHHHHH---CSCCSCEEEECSSSSHHHHHHHHH
T ss_pred EEeccEEEEEEEEecCCcceEEEEEEECCcccCCCCCChHHHHHHHHHHHHHh---cCCCCCEEEEcCCCchHHHHHHHH
Confidence 01223332 3467654446677888877765543 235679999999999999999998
Q ss_pred HHHHhc-----CCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhh
Q 005774 222 FLMRSQ-----SMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (677)
Q Consensus 222 YLm~~~-----~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (677)
..+..+ ..++.+++..+|+.|+..+.+..|...++.....
T Consensus 256 d~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fi~~~ll~ 300 (307)
T 3s3e_A 256 DRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLA 300 (307)
T ss_dssp HHHHHHTTTCSEECHHHHHHHHHHHSTTSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHHHhhCCCCcCCHHHHHHHHHHHHH
Confidence 877532 3579999999999999999999998877655443
No 78
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.70 E-value=6.7e-08 Score=110.84 Aligned_cols=89 Identities=21% Similarity=0.258 Sum_probs=70.3
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhc-----CCCHHHHHHHHHhcCCC
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-----SMSVAQAIKKFAEVRPP 244 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~-----~~s~~eAi~~~~~~Rp~ 244 (677)
..+|+|.+++...+..|+..+.+... ...+++|+|||.+|.||||++||++++..+ ..++.+++..+|+.|+.
T Consensus 489 ~WPD~gvP~~~~~ll~~i~~v~~~~~--~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~qR~~ 566 (599)
T 2jjd_A 489 GWPEIGIPAEGKGMIDLIAAVQKQQQ--QTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPH 566 (599)
T ss_dssp CSCSSSCCSCCHHHHHHHHHHHHHHH--HSTTCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTT
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHh--ccCCCcEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhCcc
Confidence 45677655566788888887766533 235689999999999999999998776422 35899999999999999
Q ss_pred CcCCHHHHHHHHHHHh
Q 005774 245 GIYKNEYIEALYTFYH 260 (677)
Q Consensus 245 ~i~~~~~l~~L~~~y~ 260 (677)
.+.+..|...++..-.
T Consensus 567 mVqt~~QY~F~y~~l~ 582 (599)
T 2jjd_A 567 MVQTLEQYEFCYKVVQ 582 (599)
T ss_dssp SSCSHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHH
Confidence 9999998888875543
No 79
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=98.69 E-value=5.7e-08 Score=102.70 Aligned_cols=84 Identities=14% Similarity=0.250 Sum_probs=66.0
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCC
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPP 244 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~~~s~~eAi~~~~~~Rp~ 244 (677)
..+|++.+++.+.+..|+..+... ..+++|+|||.+|.||||++||++++.. ..+++.+++..+|+.|+.
T Consensus 213 ~WPD~gvP~~~~~ll~~i~~v~~~-----~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~ 287 (315)
T 1wch_A 213 AWPDHDTPSQPDDLLTFISYMRHI-----HRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHG 287 (315)
T ss_dssp SCCTTSCCSCHHHHHHHHHHHHHH-----CCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSTT
T ss_pred ecCCCCCCCCHHHHHHHHHHHHhh-----CCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcc
Confidence 456775444577788887765432 3468999999999999999999887532 247899999999999999
Q ss_pred CcCCHHHHHHHHHH
Q 005774 245 GIYKNEYIEALYTF 258 (677)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (677)
.+.+..|...++..
T Consensus 288 ~Vqt~~Qy~Fiy~~ 301 (315)
T 1wch_A 288 MVQTEDQYIFCYQV 301 (315)
T ss_dssp CSCSHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHH
Confidence 99999888777643
No 80
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=98.69 E-value=5.9e-08 Score=102.01 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=65.8
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhc-------CCCHHHHHHHHHhcCC
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-------SMSVAQAIKKFAEVRP 243 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~-------~~s~~eAi~~~~~~Rp 243 (677)
.+|++.+++...+..|+..+... ..+++|+|||.+|.||||++||++++..+ ..++.+++..+|+.|+
T Consensus 194 Wpd~gvP~~~~~~l~~~~~v~~~-----~~~~PivVHCsaGvGRTGtfiai~~~~~~l~~~~~~~~~v~~~v~~lR~qR~ 268 (302)
T 4az1_A 194 WPDHGIPQSATSLEALLTNVKNS-----PTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSAMRRQRF 268 (302)
T ss_dssp SCTTSCCSCHHHHHHHHHHHHHS-----CTTSCEEEESSSSSSHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHST
T ss_pred CCcCCccCCHHHHHHHHHHHHHh-----CCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhcCc
Confidence 46765444677777777665432 25689999999999999999999877643 3789999999999999
Q ss_pred CCcCCHHHHHHHHHH
Q 005774 244 PGIYKNEYIEALYTF 258 (677)
Q Consensus 244 ~~i~~~~~l~~L~~~ 258 (677)
.++.+..|...++..
T Consensus 269 ~~Vqt~~QY~Fiy~~ 283 (302)
T 4az1_A 269 GMVQRMEQYFVIYLT 283 (302)
T ss_dssp TCSCSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHH
Confidence 999999988887754
No 81
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=98.64 E-value=5.9e-08 Score=101.96 Aligned_cols=85 Identities=19% Similarity=0.319 Sum_probs=65.3
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh------cCCCHHHHHHHHHhcCCC
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS------QSMSVAQAIKKFAEVRPP 244 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~------~~~s~~eAi~~~~~~Rp~ 244 (677)
.+|+|.+++...+..|+..+.+.. ...+++|+|||.+|.||||++||++++.. ..+++.+++..+|+.|+.
T Consensus 197 WPD~gvP~~~~~ll~~~~~v~~~~---~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~vdv~~~v~~lR~qR~~ 273 (301)
T 2i1y_A 197 WPAEGTPASTRPLLDFRRKVNKCY---RGRSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQRPG 273 (301)
T ss_dssp CCSSSBCSCSHHHHHHHHHHHHSC---CCSSCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHTTSTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh---CCCCCCEEEEECCCCchhHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCcc
Confidence 567754445677777776665421 23568999999999999999999976531 137999999999999999
Q ss_pred CcCCHHHHHHHHHH
Q 005774 245 GIYKNEYIEALYTF 258 (677)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (677)
.+.+..|...++..
T Consensus 274 ~Vqt~~QY~Fiy~a 287 (301)
T 2i1y_A 274 LVRSKDQFEFALTA 287 (301)
T ss_dssp CSCSHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHH
Confidence 99999888776644
No 82
>1xk5_A Snurportin-1; protein-RNA-complex, transport protein; HET: TPG; 2.40A {Homo sapiens}
Probab=98.64 E-value=8.5e-07 Score=86.92 Aligned_cols=161 Identities=14% Similarity=0.155 Sum_probs=114.0
Q ss_pred CCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCCCccccc--CCCCeeeeEEEEEecCCCCCCceeEEE
Q 005774 364 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEK--THHFTLLDGEMIIDKLPDSRRQERRYL 441 (677)
Q Consensus 364 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~--~~~~tlLDGElV~d~~~~~~~~~~~yl 441 (677)
.+|++-.-.-|.|+|+...++.+-..+|+|... .+|+..-. .|-... ....||||+....+ .-+|+
T Consensus 21 ~~Wl~vp~P~GkRcLvva~~G~T~~~~k~G~~~---~~F~S~LP-gG~~~~~~~~~~tILDCI~~e~--------~~tyY 88 (204)
T 1xk5_A 21 QEWIVVVCPVGKRALIVASRGSTSAYTKSGYCV---NRFSSLLP-GGNRRNSTAKDYTILDCIYNEV--------NQTYY 88 (204)
T ss_dssp HHEEEEEEESSEEEEEEEETTEEEEECTTSCEE---EEECCSSS-SSCSSSCCTTCCEEEEEEEEGG--------GTEEE
T ss_pred CCeEEEECCCCcEEEEEecCCeEEEECCCCcEE---EEEcccCC-CCCcccCCCCCCEEEEEEEecC--------CcEEE
Confidence 479888999999999999999888889988621 23543211 110011 23569999988743 24799
Q ss_pred EeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHHHHhcccccC
Q 005774 442 IYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSH 521 (677)
Q Consensus 442 iFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~~~~l~h 521 (677)
|.|+|+++|.++.+....=|.--|+.-+.+... ..+. ...+++.+..-++++.+. +.|-+-+......
T Consensus 89 VLDvl~W~g~~l~dcetefRffWl~skl~E~~~--l~~~---------s~~n~~~f~~lp~~~c~~-~~l~~~~~~~~~~ 156 (204)
T 1xk5_A 89 VLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEG--LGEK---------TKLNPFKFVGLKNFPCTP-ESLCDVLSMDFPF 156 (204)
T ss_dssp EEEEEEETTEECTTSCHHHHHHHHHHHTTTSTT--TTSC---------BTTBSSEEEECCEEECSH-HHHHHHHTCCCSS
T ss_pred EEEEEEECCceeecCcHHHHHHHHHHHhccccc--cccc---------cccCCcceEecccccCCH-HHHHHHHccCCCC
Confidence 999999999999999999999999987654210 1000 134577788888888763 2233333345678
Q ss_pred CCceEEEEeCCCCCccCCCCCeEEEcc
Q 005774 522 DADGLVFQGWDDPYVPRTHEGLLKWKY 548 (677)
Q Consensus 522 ~~DGLIf~p~~spY~~G~~~~lLKWKp 548 (677)
..|||+|-.+++-|.+|++.-+.=+||
T Consensus 157 ~~DGlLFyHK~a~Y~~G~TPLv~WLkp 183 (204)
T 1xk5_A 157 EVDGLLFYHKQTHYSPGSTPLVGWLRP 183 (204)
T ss_dssp CEEEEEEEESSCCCCSEEEEEEEEECG
T ss_pred CcceEEEEeccccccCCCCChhhhcch
Confidence 999999999999999998755443354
No 83
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.63 E-value=2.1e-07 Score=106.33 Aligned_cols=141 Identities=18% Similarity=0.323 Sum_probs=99.0
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---h------------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---L------------ 159 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---~------------ 159 (677)
.||+...||..+..+. +.|+.+ .++..||-||... .|+..+. +
T Consensus 376 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 441 (575)
T 1lar_A 376 AYIATQGPLAESTEDF--------WRMLWE------HNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYN 441 (575)
T ss_dssp CEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEESSCCCSCSSSCEEETTEEEEEEEEEE
T ss_pred ceEEecCCCcchHHHH--------HHHHHh------cCCcEEEEccccccCCeecccccCCCCCCcceeeEEEEEEEEEE
Confidence 6888999988766553 344543 5788999998642 2332110 0
Q ss_pred -----------h------hCCcEEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHH
Q 005774 160 -----------K------KEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (677)
Q Consensus 160 -----------~------~~gI~y~~ip-~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (677)
. ...|.++++. .+|+|.+++...+..|+..+...... ...+++|+|||.+|.||||++||+
T Consensus 442 ~~~~~~r~~~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiai 520 (575)
T 1lar_A 442 MPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQ-FGQDGPITVHCSAGVGRTGVFITL 520 (575)
T ss_dssp CSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSCCSSCHHHHHHHHHHHHHHHH-TTCCSCEEEESSSSSSHHHHHHHH
T ss_pred cCccEEEEEEEEecCCCCceEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhh-cCCCCcEEEEECCCCchHHHHHHH
Confidence 0 1123444433 56776555667888888877665432 235689999999999999999999
Q ss_pred HHHHh-----cCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005774 222 FLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 222 YLm~~-----~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
.++.. ...++.+++..+|+.|+..+.+..|...++..
T Consensus 521 d~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~f~y~~ 562 (575)
T 1lar_A 521 SIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRA 562 (575)
T ss_dssp HHHHHHHHHHSEECHHHHHHHHTTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHhhCchhcCCHHHHHHHHHH
Confidence 88742 24689999999999999999999888777654
No 84
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=98.62 E-value=1.2e-07 Score=99.88 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=66.1
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH----h-cCCC--HHHHHHHHHhcC
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----S-QSMS--VAQAIKKFAEVR 242 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~-~~~s--~~eAi~~~~~~R 242 (677)
..+|++.+++...+..|+..+.. ...+++|+|||.+|.||||++||++++. . ...+ +.+++..+|+.|
T Consensus 196 ~WpD~gvP~~~~~~l~~~~~v~~-----~~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~~d~~v~~~v~~lR~qR 270 (306)
T 3m4u_A 196 GWPDHGVPESAASFDELLSVIKN-----CVTTSPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKR 270 (306)
T ss_dssp SCCTTSCCSCHHHHHHHHHHHHT-----CCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHh-----hCCCCCEEEEcCCCCcchheeehHHHHHHHHHcCCCcchHHHHHHHHHHhcC
Confidence 35677544466777777665432 2346899999999999999999988874 2 2346 889999999999
Q ss_pred CCCcCCHHHHHHHHHHHhh
Q 005774 243 PPGIYKNEYIEALYTFYHE 261 (677)
Q Consensus 243 p~~i~~~~~l~~L~~~y~~ 261 (677)
+..+.+..|...++..-.+
T Consensus 271 ~~~Vqt~~Qy~fiy~~ll~ 289 (306)
T 3m4u_A 271 FGMVQRLEQYAVIYMTVLG 289 (306)
T ss_dssp TTSSCSHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHH
Confidence 9999999998888765443
No 85
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=98.61 E-value=1.3e-07 Score=100.01 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=65.9
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH----h-cCCCHHHHHHHHHhcCCCC
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----S-QSMSVAQAIKKFAEVRPPG 245 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~-~~~s~~eAi~~~~~~Rp~~ 245 (677)
.+|++.+++.+.+..|+..+.+.-. ....+++|+|||.+|.||||++||++++. . ..+++.+++..+|+.|+.+
T Consensus 180 WpD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~ 258 (314)
T 1l8k_A 180 WPDFGVPESPASFLNFLFKVRESGS-LNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGL 258 (314)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHTTT-TSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHHTTTBTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhh-ccCCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcccc
Confidence 4677544456777777766543211 11246899999999999999999986542 2 2479999999999999999
Q ss_pred cCCHHHHHHHHHHHh
Q 005774 246 IYKNEYIEALYTFYH 260 (677)
Q Consensus 246 i~~~~~l~~L~~~y~ 260 (677)
+.+..|...++..-.
T Consensus 259 Vqt~~Qy~fiy~al~ 273 (314)
T 1l8k_A 259 IQTPDQLRFSYMAII 273 (314)
T ss_dssp SCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999998888775533
No 86
>2vug_A PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transferase; HET: ANP; 2.9A {Pyrococcus abyssi GE5}
Probab=98.60 E-value=4e-07 Score=98.58 Aligned_cols=162 Identities=17% Similarity=0.223 Sum_probs=97.8
Q ss_pred CCCCCCccc-ccchhchhhhccCCeEEEEcccceEEEEEEECCEEEEEeCCCcccccc-CcCCCcCCCCcccccCCCCee
Q 005774 343 MQFPGSHPV-SLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQ-MRFPCRNSNEGLGEKTHHFTL 420 (677)
Q Consensus 343 ~~FPGsqPV-sl~r~nl~~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~-~~FP~~~~~~~~~~~~~~~tl 420 (677)
.+||--.|. |++..--.......|+|++|.||.|+.++..++.+.+.+|++..-.++ -.||.... ..+.. .....+
T Consensus 73 ~~fpkv~~mlsL~~~~~~~~~~~~~vvEeKlDG~~v~l~y~~G~v~a~TRg~g~e~iT~n~i~~wip-~~L~~-~~~~l~ 150 (389)
T 2vug_A 73 PGFPHIKRIINLRSGIRRIFKRGEFYVEEKVDGYNVRVVMYKGKMLGITRGGFICPFTTERIPDFVP-QEFFK-DNPNLI 150 (389)
T ss_dssp CCCCCCEEESSSHHHHHHHSSSCEEEEEEECCSEEEEEEEETTEEEEEETTSCBCHHHHHHGGGTSC-THHHH-HCTTEE
T ss_pred cCCCCcccccCchhhhhhhccCCeEEEEEeecCcEEEEEEECCEEEEEeCCCCCCCCchhhhhHhHH-HHHhc-CCCcEE
Confidence 578865443 555441111123579999999999999988888888999998751111 13443111 11110 145689
Q ss_pred eeEEEEEecCC----C--CCCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCC
Q 005774 421 LDGEMIIDKLP----D--SRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEP 494 (677)
Q Consensus 421 LDGElV~d~~~----~--~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~p 494 (677)
||||++.-..+ + .+...+.|++||++..++.. ..|+.+|+.+|++.-+.. .|.
T Consensus 151 L~GEvv~~~~~f~~~n~~np~r~l~F~vFDV~~~~~g~--~~s~~er~~~L~~lG~~~------------vp~------- 209 (389)
T 2vug_A 151 LVGEMAGPESPYLVEGPPYVKEDIQFFLFDVQEIKTGR--SLPVEERLKIAEEYGINH------------VEV------- 209 (389)
T ss_dssp EEEEEESSSCSSCSCCCTTCCSSCEEEEEEEEETTTCC--BCCHHHHHHHHHHHTCCB------------CCE-------
T ss_pred EEEEEEecCChHHHhcccCcccCCEEEEEEeeccCCCC--cCCHHHHHHHHHHcCCCC------------CCe-------
Confidence 99999875421 1 11245799999998876332 278999999999853211 111
Q ss_pred cEEEecceEEchhHHHHHHHhcccccCCCceEEEEeCC
Q 005774 495 FRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWD 532 (677)
Q Consensus 495 f~i~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~ 532 (677)
+.......+..+..+++.+ ..++.||||++..+
T Consensus 210 --~~~~~~~~~eel~~~i~~~---~~~~~EGvViK~~d 242 (389)
T 2vug_A 210 --FGKYTKDDVDELYQLIERL---SKEGREGIIMKSPD 242 (389)
T ss_dssp --EEEEEGGGHHHHHHHHHHH---HHTTCCEEEEECTT
T ss_pred --EEEEcCCCHHHHHHHHHHh---cCCCCCeEEEEECC
Confidence 1111100123444455443 36899999999976
No 87
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=98.59 E-value=2.8e-07 Score=105.58 Aligned_cols=88 Identities=17% Similarity=0.247 Sum_probs=68.4
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH----hcC----CCHHHHHHHHHhc
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----SQS----MSVAQAIKKFAEV 241 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~~~----~s~~eAi~~~~~~ 241 (677)
..+|++.+++...+..|+..+...... ....++|+|||.+|.||||++||+..+. ..| .++.+++..+|..
T Consensus 416 ~WPD~gvP~~~~~~l~fl~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~q 494 (595)
T 3ps5_A 416 SWPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQ 494 (595)
T ss_dssp CCCSSSSCSCSHHHHHHHHHHHHHHHH-CTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCSSCEECHHHHHHHHHTT
T ss_pred CcccCCccCCHHHHHHHHHHHHHHHhh-cCCCCCEEEEcCCCCchHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhh
Confidence 356775555667888888888765432 2346899999999999999999987653 234 6899999999999
Q ss_pred CCCCcCCHHHHHHHHHH
Q 005774 242 RPPGIYKNEYIEALYTF 258 (677)
Q Consensus 242 Rp~~i~~~~~l~~L~~~ 258 (677)
|+..+.+..|...++..
T Consensus 495 R~~mVqt~~QY~Fiy~~ 511 (595)
T 3ps5_A 495 RSGMVQTEAQYKFIYVA 511 (595)
T ss_dssp STTSSCSHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHH
Confidence 99999998887776543
No 88
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=98.59 E-value=6.5e-08 Score=101.39 Aligned_cols=112 Identities=14% Similarity=0.238 Sum_probs=71.0
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCC--CCcchhhhCCcEEEEEecCCCCC------CCCHH---------------
Q 005774 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRY--YPTSDLKKEGIKHVKIQCKGRDA------VPDNA--------------- 181 (677)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~--y~~~~~~~~gI~y~~ip~~d~~~------~P~~e--------------- 181 (677)
.++.++- .++. .+|++||||+...+. +.+. ....|++|+++|+.+... .|...
T Consensus 56 lt~~d~~-~L~~--lGI~tVIDLR~~~E~~~~~pd-~~~~Gi~~~~iPi~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~ 131 (296)
T 1ywf_A 56 LDDAGRA-TLRR--LGITDVADLRSSREVARRGPG-RVPDGIDVHLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGES 131 (296)
T ss_dssp CCHHHHH-HHHH--HTCCEEEECCCHHHHHHHCSC-CCCTTCEEEECCCCCSCC--------------------------
T ss_pred CCHHHHH-HHHh--CCCCEEEECcChhhhhccCCC-CCCCCCEEEEecCccccccccccccchhhHHHHHhhhccccccc
Confidence 4566653 4443 479999999854221 1122 234799999999986421 01100
Q ss_pred ---------HHHHHH--------------HHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHH
Q 005774 182 ---------SVNNFV--------------YEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKF 238 (677)
Q Consensus 182 ---------~i~~f~--------------~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~ 238 (677)
....++ ..+..+++.... +++|+|||++|++|||++++++|.. .||+.+++++.+
T Consensus 132 ~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~l~~l~~-~~pvl~HC~aGkDRTG~~~alll~~-~g~~~~~I~~DY 209 (296)
T 1ywf_A 132 GESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLAA-GRPVLTHCFAGKDRTGFVVALVLEA-VGLDRDVIVADY 209 (296)
T ss_dssp -----CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHHHT-TCCEEEECSSSSSHHHHHHHHHHHH-TTCCHHHHHHHH
T ss_pred chhhhcccchHHHHHHHHHHHHHhcchhHHHHHHHHHHhcc-CCCEEEECCCCCccccHHHHHHHHH-cCCCHHHHHHHH
Confidence 000110 122333433222 7899999999999999999999886 799999999988
Q ss_pred HhcC
Q 005774 239 AEVR 242 (677)
Q Consensus 239 ~~~R 242 (677)
....
T Consensus 210 ~~Tn 213 (296)
T 1ywf_A 210 LRSN 213 (296)
T ss_dssp HGGG
T ss_pred HHHH
Confidence 7653
No 89
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.58 E-value=2e-07 Score=107.14 Aligned_cols=145 Identities=19% Similarity=0.348 Sum_probs=97.8
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----------------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (677)
.||+.-.||..+..+. +.|+.+ .++..||-||... .|+....
T Consensus 408 ~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~Ywp~~~~~~g~~~V~~~~~~~~ 473 (610)
T 1ygr_A 408 VMIAAQGPLKETIGDF--------WQMIFQ------RKVKVIVMLTELKHGDQEICAQYWGEGKQTYGDIEVDLKDTDKS 473 (610)
T ss_dssp EEEEEECCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEESSCCCCCSSCCEETTEECCEEEEEEC
T ss_pred cEEEeCCCChhhHHHH--------HHHHHH------cCcCeEEeccccccCCceeccccCCCCCcEeeeEEEEEEEEEec
Confidence 5888888887765543 344443 5788999998642 2332110
Q ss_pred ---------hhh------CCcEEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHh-------cccCCceEEEEcCCCCChh
Q 005774 159 ---------LKK------EGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSR-------QKHSKKYILVHCTHGHNRT 215 (677)
Q Consensus 159 ---------~~~------~gI~y~~ip-~~d~~~~P~~e~i~~f~~~v~~fi~~-------~~~~~~~VlVHC~~G~~RT 215 (677)
+.. ..|.++++. .+|+|.+++...+..|+..+.+.... ....+++|+|||.+|.|||
T Consensus 474 ~~~~~r~l~l~~~~~~~~r~V~h~~y~~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRT 553 (610)
T 1ygr_A 474 STYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQT 553 (610)
T ss_dssp SSEEEEEEEEBCSSCSCCEEEEEEEECSCCSSSCCSCHHHHHHHHHHHHTTSCCCC-------CCCCCEEEEESSSSTTH
T ss_pred CCeEEEEEEEEECCCCCcEEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCCCEEEEeCCCCcch
Confidence 000 124444443 56775555677777777766543210 0124689999999999999
Q ss_pred HHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhh
Q 005774 216 GYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (677)
Q Consensus 216 G~li~aYLm~~-----~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (677)
|++||++++.. ...++.+++..+|+.|+..+.+..|...+++.-.+
T Consensus 554 Gtf~ai~~~l~~~~~~~~vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~~~~ 604 (610)
T 1ygr_A 554 GIFCALLNLLESAETEEVVDIFQVVKALRKARLGMVSTFEQYQFLYDVIAS 604 (610)
T ss_dssp HHHHHHHHHHHHHHHSSBCCHHHHHHHHHHHSTTTTCSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhCCccCHHHHHHHHHHhCccccCCHHHHHHHHHHHHH
Confidence 99999987643 23689999999999999999999998888765443
No 90
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.56 E-value=4e-07 Score=103.93 Aligned_cols=139 Identities=18% Similarity=0.294 Sum_probs=96.7
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----------------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (677)
+||+...||..+..+. +.|+.+ .++..||-||... .|+..+.
T Consensus 87 ~yIatQgPl~~T~~dF--------W~Mvwe------~~~~~IVmlt~~~E~~~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 152 (575)
T 1lar_A 87 AYIATQGPLPETMGDF--------WRMVWE------QRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVE 152 (575)
T ss_dssp EEEEECCCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCSSSEEEETTEEEEEEEEEE
T ss_pred eeEecCCCCcchHHHH--------HHHHhh------cCCCEEEEcccceeCCccccccccCCCCCceeeeEEEEEEEEEe
Confidence 5888888987766543 344443 5788999998642 2332110
Q ss_pred ----------hhh------CCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHH
Q 005774 159 ----------LKK------EGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (677)
Q Consensus 159 ----------~~~------~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (677)
+.. ..|.++++ ..+|+|.+++...+..|+..+... ....+++|+|||.+|.||||++|++
T Consensus 153 ~~~~~~r~l~l~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~~l~~~~~v~~~---~~~~~~pivVHCsaGvGRTGtfiai 229 (575)
T 1lar_A 153 LATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKAC---NPLDAGPMVVHCSAGVGRTGCFIVI 229 (575)
T ss_dssp CSSEEEEEEEEEETTSCCEEEEEEEEECCSCSSSCCSCSHHHHHHHHHHHHH---SCTTCCCEEEESSSSSSHHHHHHHH
T ss_pred cCCeEEEEEeeecCCCCccEEEEEEEeCCCCCCCcccCHHHHHHHHHHHHHh---cCCCCCCEEEEecCCCcceeEEEEh
Confidence 000 12444444 357886555667788888776543 1234689999999999999999998
Q ss_pred HHHHh-----cCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005774 222 FLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 222 YLm~~-----~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
.++.. ...++.+++..+|+.|+..+.+..|...++..
T Consensus 230 d~~l~~l~~~~~v~i~~~v~~lR~qR~~~Vqt~~Qy~fi~~~ 271 (575)
T 1lar_A 230 DAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEA 271 (575)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHHHhhhhccCCCHHHHHHhHHH
Confidence 76642 34689999999999999999999887777654
No 91
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.53 E-value=3.7e-07 Score=104.72 Aligned_cols=86 Identities=21% Similarity=0.269 Sum_probs=66.2
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHH-----HhcCCCHHHHHHHHHhcCCC
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM-----RSQSMSVAQAIKKFAEVRPP 244 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm-----~~~~~s~~eAi~~~~~~Rp~ 244 (677)
..+|+|.+++...+..|+..+... ....+++|+|||.+|.||||++||...+ .....++.+++..+|+.|+.
T Consensus 195 ~WpD~gvP~~~~~~l~~~~~v~~~---~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~qR~~ 271 (599)
T 2jjd_A 195 SWPDFGVPFTPIGMLKFLKKVKTL---NPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQ 271 (599)
T ss_dssp CCCSSSCCSCSHHHHHHHHHHHHH---SCTTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTT
T ss_pred CCCCCCCCCChHHHHHHHHHHHhh---ccCCCceEEEEeCCCCcccchhhHHHHHHHHHhccCCcCHHHHHHHHHHhhhc
Confidence 356775444677888888777553 1234689999999999999999985433 33467999999999999999
Q ss_pred CcCCHHHHHHHHHH
Q 005774 245 GIYKNEYIEALYTF 258 (677)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (677)
.+.+..|...++..
T Consensus 272 ~Vqt~~Qy~f~y~~ 285 (599)
T 2jjd_A 272 MVQTDMQYTFIYQA 285 (599)
T ss_dssp CSCCHHHHHHHHHH
T ss_pred cccchHHheeeeee
Confidence 99999887776543
No 92
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.50 E-value=3.7e-07 Score=104.98 Aligned_cols=140 Identities=18% Similarity=0.226 Sum_probs=93.8
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---------------
Q 005774 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (677)
Q Consensus 102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (677)
.+||+.-.||..+..+. +.|+.+ .++..||-||... .|+....
T Consensus 97 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~ 162 (610)
T 1ygr_A 97 RKYIAAQGPRDETVDDF--------WRMIWE------QKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRAFGDVVVKINQ 162 (610)
T ss_dssp TCEEEECCCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEESCCCCSCCTTTCEEEETTEEEEEEE
T ss_pred ceEEEeCCCchhHHHHH--------HHHHhc------ccCcEEEeCCccccCCccccceecccCCCCceeeccEEEEEEE
Confidence 36899999988766554 344443 5788999998642 2443100
Q ss_pred -----------h--hh-------CCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHH
Q 005774 159 -----------L--KK-------EGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (677)
Q Consensus 159 -----------~--~~-------~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~ 217 (677)
+ .. .-|.++++ ..+|+|.+++...+..|+..+..+ ....+++|+|||.+|.||||+
T Consensus 163 ~~~~~~~~~r~l~l~~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~~~~v~~~---~~~~~~PivVHCsaGvGRTGt 239 (610)
T 1ygr_A 163 HKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAF---SNFFSGPIVVHSSAGVGRTGT 239 (610)
T ss_dssp EEECSSEEEEEEEEEESSSCCCCEEEEEEEECSCCTTSCCSCHHHHHHHHHHHTTS---CCTTCCCEEEECSSSSHHHHH
T ss_pred EEecCCcEEEEEEEEeccCCCCCcEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHh---hccCCCCeEEEcCCCCCchhh
Confidence 0 00 11333333 456775444566666665544321 112468999999999999999
Q ss_pred HHHHHHHHh-----cCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005774 218 MIVHFLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (677)
Q Consensus 218 li~aYLm~~-----~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (677)
+||+.++.. ...++.+++..+|+.|+..+.+..|...+++.
T Consensus 240 fiaid~~l~~l~~~~~v~v~~~v~~lR~qR~~~Vqt~~Qy~fi~~~ 285 (610)
T 1ygr_A 240 YIGIDAMLEGLEAENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQA 285 (610)
T ss_dssp HHHHHHHHHTHHHHSEECHHHHHHHHHTTSTTSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHhhhcCCcCcHHHHHHHHHH
Confidence 999988742 35789999999999999999998877776644
No 93
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=98.48 E-value=4.6e-07 Score=102.45 Aligned_cols=87 Identities=18% Similarity=0.297 Sum_probs=68.4
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh----cC----CCHHHHHHHHHhc
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS----QS----MSVAQAIKKFAEV 241 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~----~~----~s~~eAi~~~~~~ 241 (677)
..+|++.+++...+..|+..+...... ...+++|+|||.+|.||||++||++++.. .+ .++.+++..+|+.
T Consensus 416 ~Wpd~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaG~GRTGtfia~d~~~~~l~~~~~~~~vdv~~~v~~lR~q 494 (532)
T 2b3o_A 416 SWPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQ 494 (532)
T ss_dssp CCCSSSCCSSSHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHSCTTSCCCHHHHHHHHTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhh-cCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhh
Confidence 356775444567888888887665432 23568999999999999999999877643 34 7899999999999
Q ss_pred CCCCcCCHHHHHHHHH
Q 005774 242 RPPGIYKNEYIEALYT 257 (677)
Q Consensus 242 Rp~~i~~~~~l~~L~~ 257 (677)
|+..+.+..|...++.
T Consensus 495 R~~~Vqt~~Qy~fiy~ 510 (532)
T 2b3o_A 495 RSGMVQTEAQYKFIYV 510 (532)
T ss_dssp STTSSCSHHHHHHHHH
T ss_pred CcccCCCHHHHHHHHH
Confidence 9999999988877754
No 94
>3gjx_B Snurportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Homo sapiens} PDB: 3nby_B* 3nbz_B* 3nc0_B* 3gb8_B 2qna_B
Probab=98.48 E-value=3.3e-06 Score=88.35 Aligned_cols=161 Identities=14% Similarity=0.170 Sum_probs=113.7
Q ss_pred CCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCCCcccc-c-CCCCeeeeEEEEEecCCCCCCceeEEE
Q 005774 364 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGE-K-THHFTLLDGEMIIDKLPDSRRQERRYL 441 (677)
Q Consensus 364 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~-~-~~~~tlLDGElV~d~~~~~~~~~~~yl 441 (677)
.+|+|..=.-|.|||++...+.+-.++|++... .+||..-. .|-.. . ....||||+...-. .-+|+
T Consensus 122 ~~W~~vpcPvGkRcLVVas~G~T~aysk~G~~l---~~F~S~LP-GG~~~~s~~~~~TILDCIy~e~--------~~tyY 189 (365)
T 3gjx_B 122 QEWIVVVCPVGKRALIVASRGSTSAYTKSGYCV---NRFSSLLP-GGNRRNSTAKDYTILDCIYNEV--------NQTYY 189 (365)
T ss_dssp HHEEEEEEESSEEEEEEEETTEEEEECTTCCEE---EEECCSST-TTCC----CCCCEEEEEEEETT--------TTEEE
T ss_pred cCeeEEeccCCcEEEEEecCceEEEECCCCCEE---eeeCCCCC-CCCccccCCCCCEEEEEEeecC--------CceEE
Confidence 378888888899999999999888899988521 23553211 11100 0 23579999987632 23799
Q ss_pred EeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHHHHhcccccC
Q 005774 442 IYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSH 521 (677)
Q Consensus 442 iFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~~~~l~h 521 (677)
|.|||+++|.++.+++..-|.--|..-+-+... +.+ ....+||.+..-..++.+. +.|-+.+....++
T Consensus 190 VLDVL~W~g~~l~dCeteFRffWl~SKL~E~~~-----l~e------~s~~np~~Fv~lp~~~C~~-esL~~~ls~~~pf 257 (365)
T 3gjx_B 190 VLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEG-----LGE------KTKLNPFKFVGLKNFPCTP-ESLCDVLSMDFPF 257 (365)
T ss_dssp EEEEEEETTEECTTSCHHHHHHHHHHHGGGSTT-----TTS------CCSSCCSEEEECCEEECCH-HHHHHHTTCCCSS
T ss_pred EEEEeeeCCcccccCchHHHHHHHHHHhhhccc-----ccc------cccCCCCceeccCCCCcCH-HHHHHHhccCCCC
Confidence 999999999999999999999999887643210 100 1124677788888888764 3344444557788
Q ss_pred CCceEEEEeCCCCCccCCCCCeEEEcc
Q 005774 522 DADGLVFQGWDDPYVPRTHEGLLKWKY 548 (677)
Q Consensus 522 ~~DGLIf~p~~spY~~G~~~~lLKWKp 548 (677)
+.|||+|-...+-|.+|.+.-+.=+||
T Consensus 258 e~DGLLFYHK~ahY~~G~TPLVgWLkP 284 (365)
T 3gjx_B 258 EVDGLLFYHKQTHYSPGSTPLVGWLRP 284 (365)
T ss_dssp CEEEEEEEETTCCCCSEEEEEEEEECH
T ss_pred ccceEEEEeccccccCCCCccceecch
Confidence 999999999999999998754433344
No 95
>4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens}
Probab=98.45 E-value=5.2e-07 Score=96.85 Aligned_cols=87 Identities=18% Similarity=0.230 Sum_probs=64.9
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHH----Hh----cCCCHHHHHHHHHhcC
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM----RS----QSMSVAQAIKKFAEVR 242 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm----~~----~~~s~~eAi~~~~~~R 242 (677)
.+|++.+++...+..|+..+.+... ....+++|+|||.+|.||||++||+.++ .. ...++.+++..+|+.|
T Consensus 213 WPD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~qR 291 (354)
T 4i8n_A 213 WPDFGVPESPASFLNFLFKVRESGS-LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFR 291 (354)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHTTT-TCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHTTS
T ss_pred cccCCccCCHHHHHHHHHHHHHHhh-ccCCCCCEEEEeCCCcchHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhC
Confidence 4677544467777777776654311 1224679999999999999999987643 21 2478999999999999
Q ss_pred CCCcCCHHHHHHHHHH
Q 005774 243 PPGIYKNEYIEALYTF 258 (677)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (677)
+..+.+..|...++..
T Consensus 292 ~~mVqt~~QY~F~Y~a 307 (354)
T 4i8n_A 292 MGLIQTADQLRFSYLA 307 (354)
T ss_dssp TTCSCSHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHH
Confidence 9999999888777644
No 96
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=98.39 E-value=9.9e-07 Score=99.58 Aligned_cols=87 Identities=21% Similarity=0.300 Sum_probs=68.6
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH----hcC----CCHHHHHHHHHhcC
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----SQS----MSVAQAIKKFAEVR 242 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~~~----~s~~eAi~~~~~~R 242 (677)
.+|++.+++...+..|+..+...... ...+++|+|||.+|.||||++||+.++. ..| .++.+++..+|+.|
T Consensus 423 WPD~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR 501 (525)
T 2shp_A 423 WPDHGVPSDPGGVLDFLEEVHHKQES-IMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQR 501 (525)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSEECHHHHHHHHHTTS
T ss_pred CCCCCcccChHHHHHHHHHHHHHHhc-cCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHhC
Confidence 56775555678888888887664332 2346899999999999999999986652 334 58999999999999
Q ss_pred CCCcCCHHHHHHHHHH
Q 005774 243 PPGIYKNEYIEALYTF 258 (677)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (677)
+..+.+..|...++..
T Consensus 502 ~~~Vqt~~QY~fiy~~ 517 (525)
T 2shp_A 502 SGMVQTEAQYRSIYMA 517 (525)
T ss_dssp TTSSCCHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 9999999988877654
No 97
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A
Probab=98.39 E-value=1.3e-06 Score=91.93 Aligned_cols=63 Identities=21% Similarity=0.283 Sum_probs=54.6
Q ss_pred CceEEEEcCCCCChhHHHHHHHHHHhc---CCCHHHHHHHHHhcCCC-CcCCHHHHHHHHHHHhhcC
Q 005774 201 KKYILVHCTHGHNRTGYMIVHFLMRSQ---SMSVAQAIKKFAEVRPP-GIYKNEYIEALYTFYHEKR 263 (677)
Q Consensus 201 ~~~VlVHC~~G~~RTG~li~aYLm~~~---~~s~~eAi~~~~~~Rp~-~i~~~~~l~~L~~~y~~~~ 263 (677)
.++++|||.+|.||||++||+.++..+ ..++.+++..+|+.|+. .+.+..|...+++.-.+..
T Consensus 234 ~~piVVHCSAGvGRTGtfiaid~ll~~~~~~vdv~~~V~~lR~qR~~~mVQt~~QY~fiy~~~~~~~ 300 (306)
T 1lyv_A 234 KLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQG 300 (306)
T ss_dssp SSCCEEECSSSSSHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHHTCTTSSCSHHHHHHHHHHHHHHT
T ss_pred CCCcEEEcCCCCchhHHHHHHHHHHHhhcCCCCHHHHHHHHHhcCCcCcCCCHHHHHHHHHHHHHhh
Confidence 457899999999999999999887543 67999999999999999 9999999999887766543
No 98
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=98.37 E-value=1.2e-06 Score=92.54 Aligned_cols=141 Identities=21% Similarity=0.282 Sum_probs=94.9
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc---h--hhh--------
Q 005774 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS---D--LKK-------- 161 (677)
Q Consensus 103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~---~--~~~-------- 161 (677)
.||+.-.||..+..+. +.|+.+ .++..||-||... .|+..+ . +..
T Consensus 96 ~yIaTQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kC~~YwP~~~~~~~~~g~~~V~~~~~ 161 (314)
T 4ge6_A 96 AYIGTQGPLENTYRDF--------WLMVWE------QKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGV 161 (314)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCSTTCEEEETTEEEEEEEE
T ss_pred eEEEECCCcHHHHHHH--------HHHHHh------cCCceEEEcccccccceecccccCcCCCCCceecccEEEEEEEE
Confidence 5889999998877654 345543 5789999998632 232210 0 000
Q ss_pred ---------------------CCcEEEE-EecCCCCCCCCHHHHHHHHHHHHHHHHh----------cccCCceEEEEcC
Q 005774 162 ---------------------EGIKHVK-IQCKGRDAVPDNASVNNFVYEVTQFLSR----------QKHSKKYILVHCT 209 (677)
Q Consensus 162 ---------------------~gI~y~~-ip~~d~~~~P~~e~i~~f~~~v~~fi~~----------~~~~~~~VlVHC~ 209 (677)
.-|.+++ ...+|+|.+++...+..|+..+.+.-.. .....++|+|||.
T Consensus 162 ~~~~~~~~r~l~~~~~~~~~~r~V~h~~y~~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCS 241 (314)
T 4ge6_A 162 ENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCS 241 (314)
T ss_dssp EECSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSCCSCSHHHHHHHHHHHHHHHHHHHHSCCC----CCSCCEEEECS
T ss_pred EEcCCceEEEEeeecccCCcceEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhhhhccccccccccCCCCCEEEECC
Confidence 0122222 2356776555678888888777554221 1123579999999
Q ss_pred CCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 005774 210 HGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (677)
Q Consensus 210 ~G~~RTG~li~aYLm~-----~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (677)
+|.||||++||...+- ....++.+++..+|+.|+..+.+..|...+++
T Consensus 242 aGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fiy~ 294 (314)
T 4ge6_A 242 AGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYK 294 (314)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHSCBCHHHHHHHHTTTSTTCSCSHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHH
Confidence 9999999999876542 23468999999999999999999988876654
No 99
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.33 E-value=2.6e-06 Score=98.14 Aligned_cols=86 Identities=22% Similarity=0.181 Sum_probs=64.3
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCC
Q 005774 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPP 244 (677)
Q Consensus 170 p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~-----~~~~s~~eAi~~~~~~Rp~ 244 (677)
..+|+|.+++...+..|+..+.. .....+++|+|||.+|.||||++||+.++. ....++.+++..+|+.|+.
T Consensus 200 ~WPD~gvP~~~~~ll~~i~~~~~---~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~qR~~ 276 (627)
T 2nlk_A 200 QWPDMGVPEYALPVLTFVRRSSA---ARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNY 276 (627)
T ss_dssp CCCSSSSCSCSHHHHHHHHHHHH---TCCSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHTTTSTT
T ss_pred CCCCCCCCcChHHHHHHHHHHHh---hccCCCceEEEEcCCCCCCccEEEEHHHHHHHHHhCCCCCHHHHHHHHHhhCCC
Confidence 35677544455566666654432 112356899999999999999999987663 2346899999999999999
Q ss_pred CcCCHHHHHHHHHH
Q 005774 245 GIYKNEYIEALYTF 258 (677)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (677)
.+.+..|...++..
T Consensus 277 ~Vqt~~Qy~fiy~a 290 (627)
T 2nlk_A 277 LVQTEEQYIFIHDA 290 (627)
T ss_dssp SSCCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 99999888777654
No 100
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.05 E-value=7.8e-06 Score=94.21 Aligned_cols=87 Identities=14% Similarity=0.120 Sum_probs=65.0
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCC
Q 005774 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPG 245 (677)
Q Consensus 171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~~~s~~eAi~~~~~~Rp~~ 245 (677)
.+|+ .+|... +..|+..+... ....+++|+|||.+|.||||++||+.++.. ..+++.+++..+|+.|+..
T Consensus 494 WPD~-gvP~~~-~~~li~~v~~~---~~~~~~PivVHCsaGiGRtGtf~a~~~~l~~l~~~~~vdv~~~v~~lR~qR~~~ 568 (627)
T 2nlk_A 494 WPNP-DAPISS-TFELINVIKEE---ALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGV 568 (627)
T ss_dssp SSCT-TSCGGG-HHHHHHHHHHH---HTTCCSCEEEEESSSCHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHHSTTS
T ss_pred CCCC-CcCChh-HHHHHHHHHHh---hccCCCeEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhh
Confidence 5666 466533 34555444332 134578999999999999999999887532 2468999999999999999
Q ss_pred cCCHHHHHHHHHHHhhc
Q 005774 246 IYKNEYIEALYTFYHEK 262 (677)
Q Consensus 246 i~~~~~l~~L~~~y~~~ 262 (677)
+.+..|...++..-...
T Consensus 569 Vqt~~Qy~f~y~~v~~~ 585 (627)
T 2nlk_A 569 FTDIEQYQFIYKAMLSL 585 (627)
T ss_dssp SCSHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHH
Confidence 99999988888765443
No 101
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=96.94 E-value=0.0019 Score=68.84 Aligned_cols=69 Identities=10% Similarity=0.116 Sum_probs=58.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCC--h--hHHHHHHHHHHhcCCCHHHHHHHHHhcC
Q 005774 172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHN--R--TGYMIVHFLMRSQSMSVAQAIKKFAEVR 242 (677)
Q Consensus 172 ~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~--R--TG~li~aYLm~~~~~s~~eAi~~~~~~R 242 (677)
.|+ .+....++..|+..+.+.+.+.. ..+.++|||+.|.. | |++|++||+|...||++++|+..+....
T Consensus 49 ~df-gp~~~~~~~~~~~~~~~~l~~~~-~~~k~~~~~~~~~~~~r~naa~L~~~y~~~~~~~~~~~a~~~~~~~~ 121 (348)
T 1ohe_A 49 ADF-GPLNLAMVYRYCCKINKKLKSIT-MLRKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFGE 121 (348)
T ss_dssp SCC-CCCCHHHHHHHHHHHHHHHHCGG-GTTSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTTT
T ss_pred hhc-CCccHHHHHHHHHHHHHHHhChh-hcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhcC
Confidence 466 47889999999999998877543 34679999999985 4 8999999999999999999999988763
No 102
>1s68_A RNA ligase 2; ribonucleic acid ligase, RNA repair; HET: AMP; 1.90A {Enterobacteria phage T4} SCOP: d.142.2.4
Probab=96.23 E-value=0.021 Score=57.99 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=66.7
Q ss_pred hhccCCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCC---C----CcccccC----CCCeeeeEEEEEe
Q 005774 360 LLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNS---N----EGLGEKT----HHFTLLDGEMIID 428 (677)
Q Consensus 360 ~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~---~----~~~~~~~----~~~tlLDGElV~d 428 (677)
.+....++|+||.||+-+-+++.++++.+.+|+..+..-+-.++.... . ..+.+.. ..+.+|=||++--
T Consensus 24 ~~~~~~vvvtEKldG~N~~i~~~~~~i~~~sR~~~l~~~~~f~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~GE~~G~ 103 (249)
T 1s68_A 24 GLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGP 103 (249)
T ss_dssp TCSCSCEEEEECCCSEEEEEEEESSCEEEEETTEECCTTCCCTTTHHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEEST
T ss_pred ccCCCCEEEEEEECCcceEEEEECCEEEEEeCCcccCCCCccchHHHHHHHHHHHHHHHHHHhcccCCCcEEEEEEEccc
Confidence 345568999999999999999998899999998764211111111000 0 0010011 1466788999953
Q ss_pred cCCCC-CCceeEEEEeEEe-ecCCccccCCCHHHHHHHHHHH
Q 005774 429 KLPDS-RRQERRYLIYDMM-AINQASVIERPFYERWKMLEKE 468 (677)
Q Consensus 429 ~~~~~-~~~~~~yliFDiL-~~~G~~l~~~pf~eR~~~L~~~ 468 (677)
..... ......|++|||. ..++....-+++.+|..+++..
T Consensus 104 ~Iq~~v~Y~~~~FyvFdI~~~~~~g~~~~l~~~~~~~l~~~~ 145 (249)
T 1s68_A 104 GIQKNVDYCDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTF 145 (249)
T ss_dssp TTSSSCCCCSCEEEEEEEEEEETTCCEEECCHHHHHHHHHHH
T ss_pred cccCCcccCCCeEEEEEEEEecCCCccccCCHHHHHHHHHHC
Confidence 21111 0013489999997 4343334567899999998884
No 103
>2hvq_A ORF1, hypothetical 37.6 kDa protein in GP24-HOC intergenic region; RNA, ligase, lysine adenylate; HET: APK; 2.40A {Enterobacteria phage T4} PDB: 2hvr_A* 2hvs_A*
Probab=95.70 E-value=0.052 Score=57.46 Aligned_cols=110 Identities=12% Similarity=0.055 Sum_probs=67.7
Q ss_pred hhccCCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCCC-------cccccC----CCCeeeeEEEEEe
Q 005774 360 LLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNE-------GLGEKT----HHFTLLDGEMIID 428 (677)
Q Consensus 360 ~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~-------~~~~~~----~~~tlLDGElV~d 428 (677)
.|....++|+||.||+-+-+++.++++.+.+|+..+..-.-.|+...... .+.+.. ..+.+|=||++--
T Consensus 25 ~l~~~~vvvtEKlDG~N~~i~~~~~~i~~~sR~~~l~~~~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~i~GE~~G~ 104 (335)
T 2hvq_A 25 GLTGGEWVAREXIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGP 104 (335)
T ss_dssp TCSCSCEEEEECCSSEEEEEEEETTEEEEEETTEECCTTCCCTTTHHHHHHHHHHHHHHHTTHHHHTEEEEEEEEEEESB
T ss_pred ccCCCcEEEEEEecCcceEEEEECCEEEEecCCcccCCccccchHHHHHHHHHHHHHHHHHHhhccCCCcEEEEEEEccC
Confidence 35556899999999999999999999999999876421111111110000 110111 1467788999943
Q ss_pred cCCCC-CCceeEEEEeEEe-ecCCccccCCCHHHHHHHHHHHh
Q 005774 429 KLPDS-RRQERRYLIYDMM-AINQASVIERPFYERWKMLEKEV 469 (677)
Q Consensus 429 ~~~~~-~~~~~~yliFDiL-~~~G~~l~~~pf~eR~~~L~~~i 469 (677)
+...+ ......|++|||. ..++..-.-+|+.+|..+++..-
T Consensus 105 ~Iq~~i~Y~~~~FyvFDI~~~~~~~~~~~l~~~~~~~l~~~~g 147 (335)
T 2hvq_A 105 GIQKNVDYGDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFK 147 (335)
T ss_dssp TTBSSCCCCSSEEEEEEEEEEETTCCEEECCHHHHHHHHHHHT
T ss_pred cccCCcccCCCeEEEEEEEEecCCCceeeCCHHHHHHHHHHcC
Confidence 21110 0013489999997 43443345689999999998843
No 104
>1ta8_A DNA ligase, NAD-dependent; nucleotidyl transferase fold; HET: DNA NMN; 1.80A {Enterococcus faecalis} SCOP: d.142.2.2 PDB: 3ba8_A* 1tae_A* 3ba9_A* 3baa_A* 3bab_A*
Probab=94.97 E-value=0.27 Score=51.68 Aligned_cols=159 Identities=14% Similarity=0.129 Sum_probs=89.9
Q ss_pred CeEEEEcccceEEEEEEECCE-EEEEeCCCccc--cccCcCCCcCC-CCcccccCCCCeeeeEEEEEecC----------
Q 005774 365 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL---------- 430 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~---------- 430 (677)
.|++++|.||..+-|...++. +..++|-+-.. .|+.......+ +..+. ......+-||+++.+.
T Consensus 114 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~--~p~~leVRGEv~m~~~~F~~lN~~~~ 191 (332)
T 1ta8_A 114 AYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLT--EPISVEVRGECYMPKQSFVALNEERE 191 (332)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSCSBCS--SCCCEEEEEEEECCHHHHHHHHHHHH
T ss_pred eEEEeeeecceEEEEEEECCEEEEEEcCCCCccchhHHHHHHHhcCCccccC--CCCeEEEEEEEEEEHHHHHHHHHHHH
Confidence 699999999999988888775 68899953211 11111111111 11121 1233789999997421
Q ss_pred --CCC---------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCC
Q 005774 431 --PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPY 487 (677)
Q Consensus 431 --~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~ 487 (677)
+.. .+..+.|++|++...+|... ....+++..|+++-+.. ++.
T Consensus 192 ~~g~~~faNPRNaAAGsLrqld~~ita~R~L~ff~y~i~~~~~~~~--~t~~e~l~~L~~~GF~v------------~~~ 257 (332)
T 1ta8_A 192 ENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKA--KTQFEALEELSAIGFRT------------NPE 257 (332)
T ss_dssp HTTCCCCSSHHHHHHHHHTCSBHHHHHTSCCEEEEEEESCCTTCCC--SBHHHHHHHHHHTTCCC------------CTT
T ss_pred hcCCccccChHHHHHHHHHccChhhHhhCCCEEEEEecccccCCCC--CCHHHHHHHHHHcCCCC------------CCc
Confidence 110 02458999999964444332 57889999998854321 111
Q ss_pred ccCCCCCcEEEecceEEchhHHHHHHHh---cccccCCCceEEEEeCCCCCc------cCCCCCeEEEccCC
Q 005774 488 YRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPYV------PRTHEGLLKWKYAR 550 (677)
Q Consensus 488 ~~~~~~pf~i~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY~------~G~~~~lLKWKp~~ 550 (677)
. -..+ .+..+...++.+ ...+++..||||++-.+.++. ......-+=||+|.
T Consensus 258 ~--------~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~tsk~PRWAiAyKfpa 318 (332)
T 1ta8_A 258 R--------QLCQ---SIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFPP 318 (332)
T ss_dssp C--------EEES---SHHHHHHHHHHHHHTGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECC-
T ss_pred c--------eEeC---CHHHHHHHHHHHHHHHhcCCCCCCcEEEEecCHHHHHHhCCcCCCCCceeEecCCC
Confidence 0 0111 122233333322 468899999999998665543 22234556666663
No 105
>1b04_A Protein (DNA ligase); DNA replication; 2.80A {Geobacillus stearothermophilus} SCOP: d.142.2.2
Probab=94.37 E-value=0.38 Score=50.31 Aligned_cols=159 Identities=14% Similarity=0.112 Sum_probs=88.7
Q ss_pred CeEEEEcccceEEEEEEECCE-EEEEeCCCccc--cccCcCCCcCC-CCcccccCCCCeeeeEEEEEecC----------
Q 005774 365 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL---------- 430 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~---------- 430 (677)
.|++++|.||..+-|...++. +..++|-+-.. .|+.......+ +..+. ......+-||+++.+.
T Consensus 108 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~--~p~~levRGEv~m~~~~F~~lN~~~~ 185 (318)
T 1b04_A 108 AYVCELAIDGLAVSVRYEDGYFVQGATRGDGTTGEDITENLKTIRSLPLRLK--EPVSLEARGEAFMPKASFLRLNEERK 185 (318)
T ss_dssp CEEEEEEESSEEEEEEEETTEEEEEEECTTSSCEEBCHHHHHTCTTSCSBCS--SCCCEEEEEEEECCHHHHHHHHHHHH
T ss_pred eEEEEEecccEEEEEEEECCEEEEEEccCCCcccHHHHHhHHHhcCCCcccC--CCCeEEEEEEEEEEHHHHHHHHHHHH
Confidence 699999999999988877664 57899953211 11111111001 11121 1233789999997421
Q ss_pred --CCC---------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCC
Q 005774 431 --PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPY 487 (677)
Q Consensus 431 --~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~ 487 (677)
+.. .+..+.|++|++...+|.. -.+..+++..|+++-+.- ++.
T Consensus 186 ~~g~~~faNpRNaAAGsLrqld~~ita~R~L~ff~y~~~~~~~~~--~~t~~e~l~~L~~~Gf~v------------~~~ 251 (318)
T 1b04_A 186 ARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLADAEALG--IASHSEALDYLQALGFKV------------NPE 251 (318)
T ss_dssp HC--CCCSCHHHHHHHHHHSSCHHHHHHTCCEEEEEEETTTTTTT--CCBHHHHHHHHHHTTCCC------------CTT
T ss_pred HcCCCccchhhHHHHHHHHccChhhHhhCCCEEEEEecccccCCC--CCCHHHHHHHHHHcCCCC------------CCc
Confidence 110 0245899999995443432 257889999998854321 111
Q ss_pred ccCCCCCcEEEecceEEchhHHHHHHHh---cccccCCCceEEEEeCCCCCc------cCCCCCeEEEccCC
Q 005774 488 YRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPYV------PRTHEGLLKWKYAR 550 (677)
Q Consensus 488 ~~~~~~pf~i~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY~------~G~~~~lLKWKp~~ 550 (677)
. -..+ .+..+...++.+ ...+++..||||++-.+.++. ......-+=||+|.
T Consensus 252 ~--------~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiA~Kfpa 312 (318)
T 1b04_A 252 R--------RRCA---NIDEVIAFVSEWHDKRPQLPYEIDGIVIKVDSFAQQRALGATAKSPRWAIAYKFPA 312 (318)
T ss_dssp C--------EEES---SHHHHHHHHHHHHHHSTTCSSCEEEEEEEECBHHHHHHHCCCSSSCTTEEEEECCC
T ss_pred c--------eEeC---CHHHHHHHHHHHHHHHhhCCCCCCcEEEEecCHHHHHHhCCcCCCCCceeeecCCc
Confidence 0 1111 122233333322 468889999999997665543 22234556666654
No 106
>4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli}
Probab=93.18 E-value=2.2 Score=48.23 Aligned_cols=163 Identities=14% Similarity=0.150 Sum_probs=92.7
Q ss_pred CCeEEEEcccceEEEEEEECCE-EEEEeCCCccc--ccc---C---cCCCcCCCCcccccCCCCeeeeEEEEEecC----
Q 005774 364 RYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ---M---RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL---- 430 (677)
Q Consensus 364 ~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~---~---~FP~~~~~~~~~~~~~~~tlLDGElV~d~~---- 430 (677)
-.|++++|.||.-+.|...++. +..++|-+-.. .++ . ..|..... ........+=||++..+.
T Consensus 108 ~~~~~epKiDGlavsL~Ye~G~Lv~a~TRGDG~~GeDiT~nvrtI~~IPl~l~~----~~~p~~leVRGEv~m~~~~F~~ 183 (586)
T 4glx_A 108 VTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG----ENIPARLEVRGEVFLPQAGFEK 183 (586)
T ss_dssp -CEEEEEEESSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSCSBCCS----SSCCSEEEEEEEEECCHHHHHH
T ss_pred ceEEEEEeecceEEEEEEeCCEEEEEEccCCCcccccHHHHHHhccCccccccc----CCCCceEEEEEEEEEEhhhccc
Confidence 3799999999999987777665 68899964321 111 1 11211110 011234567899997421
Q ss_pred --------CCC---------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhccccc
Q 005774 431 --------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIY 481 (677)
Q Consensus 431 --------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~ 481 (677)
++. .+..+.|++|++..++|.++. ....+++..|++.-+.
T Consensus 184 ln~~~~~~g~~~faNpRNaaAGslrqld~~~~a~r~L~f~~y~v~~~~~~~~~-~t~~e~l~~L~~~Gf~---------- 252 (586)
T 4glx_A 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGRLLQFKKWGLP---------- 252 (586)
T ss_dssp HHHHHHHTTCCCCSCHHHHHHHHHTCSCHHHHHTSCCEEEEEEEEEEESSCCC-SBHHHHHHHHHHTTCC----------
T ss_pred cchhhhhccCccchhhHHHHhccccccchhhhhccccceeEeeeeeeeccccc-ccHHHHHHHHHHcCCC----------
Confidence 110 024579999999988876543 3467888888874321
Q ss_pred ccCCCCccCCCCCcEEEecceEEchhHHHHHH---HhcccccCCCceEEEEeCCCC------CccCCCCCeEEEccCCCc
Q 005774 482 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK---EFIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYARMN 552 (677)
Q Consensus 482 ~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~---~~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~lLKWKp~~~n 552 (677)
.++.+ ...+. +..+...++ .....++++.||||++-.+-. |+.+....-+=||+|...
T Consensus 253 --v~~~~--------~~~~~---~~~~~~~~~~~~~~R~~l~y~iDGiVikvn~~~~~~~lG~ts~~PrwAiA~Kfp~e~ 319 (586)
T 4glx_A 253 --VSDRV--------TLCES---AEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 (586)
T ss_dssp --CCTTC--------EEESS---HHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEECCCCCE
T ss_pred --Cccce--------eeecc---HHHHHHHHHHHHHhhhcccccCCceEEEecchhhhhccCCccCCCCeeEEEcccchh
Confidence 11111 11111 112222222 234678999999999964432 333344566778887655
Q ss_pred eE
Q 005774 553 SV 554 (677)
Q Consensus 553 TV 554 (677)
-.
T Consensus 320 ~~ 321 (586)
T 4glx_A 320 QM 321 (586)
T ss_dssp EE
T ss_pred he
Confidence 33
No 107
>4glw_A DNA ligase; inhibitor, ligase-ligase inhibitor complex; HET: DNA 0XT NMN; 2.00A {Streptococcus pneumoniae}
Probab=92.81 E-value=1.7 Score=45.14 Aligned_cols=151 Identities=15% Similarity=0.172 Sum_probs=86.2
Q ss_pred CeEEEEcccceEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCCCcccccCCCCeeeeEEEEEecC-----
Q 005774 365 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 430 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 430 (677)
.|++++|.||.-+.|...++. +..++|.+-.. .++ + .-|.. + .......+=||+++.+.
T Consensus 103 ~~~~epKiDGlavsL~Y~~G~L~~a~TRGDG~~GeDiT~n~~tI~~IP~~-----l--~~~~~levRGEv~m~~~~F~~~ 175 (305)
T 4glw_A 103 TYICELKIDGLSISLTYEKGILVAGVTRGDGSIGENITENLKRVKDIPLT-----L--PEELDITVRGECYMPRASFDQV 175 (305)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEECHHHHTTSTTSCSB-----C--SSCCCEEEEEEEECCHHHHHHH
T ss_pred cEEEEeeecceEEEEEEeCCeEEEEEecCCCcchhhHHHHHhhccCCccc-----C--CCcccccccceEEeehhhHHHH
Confidence 699999999999987777665 67899974321 111 1 11211 1 11234678999997421
Q ss_pred -------CCC---------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccc
Q 005774 431 -------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 482 (677)
Q Consensus 431 -------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~ 482 (677)
+.. ....+.|++|++...+|. ....+++..|.+.-+.
T Consensus 176 n~~~~~~g~~~faNpRNaaAGslrq~d~~~~~~r~L~f~~y~~~~~~~~----~s~~e~l~~L~~~Gf~----------- 240 (305)
T 4glw_A 176 NQARQENGEPEFANPRNAAAGTLRQLDTAVVAKRNLATFLYQEASPSTR----DSQEKGLKYLEQLGFV----------- 240 (305)
T ss_dssp HHHHHHTTCCCCSSHHHHHHHHHSSSBHHHHHHSCCEEEEEEESSSCSS----SBHHHHHHHHHHHTCC-----------
T ss_pred HHHHHhcCCccchhhhHHHhhhhhccCchhhhhhcceEEEeeecccccc----chHHHHHHHHHhCCCc-----------
Confidence 110 013578999998766653 3567888888875431
Q ss_pred cCCCCccCCCCCcEEEecceEEchhHHHHHHH---hcccccCCCceEEEEeCCCC------CccCCCCCeEEEccC
Q 005774 483 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYA 549 (677)
Q Consensus 483 ~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~---~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~lLKWKp~ 549 (677)
.+|.. ...+ .+..+...++. ....++++.||||++-.+-+ |+.+....-+=||+|
T Consensus 241 -~~~~~--------~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGiVikvn~~~~q~~lG~tsk~PrWAiA~Kfp 304 (305)
T 4glw_A 241 -VNPKR--------ILAE---NIDEIWNFIQEVGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYKFP 304 (305)
T ss_dssp -CCCCC--------EEES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEECBHHHHHHHCBCSSSBSSEEEEECC
T ss_pred -cCCce--------EEeC---CHHHHHHHHHHHHHHhhcCCCCCCeEEEEEeCHHHHHHcCCcCCCCCceEEeCcc
Confidence 11111 1111 11222222222 24578899999999854332 333334456777766
No 108
>3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} SCOP: d.142.2.2 PDB: 3jsn_A*
Probab=91.47 E-value=2.4 Score=44.18 Aligned_cols=154 Identities=17% Similarity=0.208 Sum_probs=88.2
Q ss_pred CeEEEEcccceEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCCCcccccCCCCeeeeEEEEEecC-----
Q 005774 365 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 430 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 430 (677)
.|++++|.||.-+-|...++. +..++|-+-.. .|+ + .-|.. + .......+=||+++.+.
T Consensus 106 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~-----L--~~~~~levRGEv~m~~~~F~~l 178 (318)
T 3jsl_A 106 EYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLK-----M--KEPLNVEVRGEAYMPRRSFLRL 178 (318)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSCSB-----C--SSCCCEEEEEEEECCHHHHHHH
T ss_pred eEEEEEeecceEEEEEEECCEEEEEEeCCCCccchhHHHHHHHhcCCccc-----c--CCCCcEEEEEEEEEcHHHHHHH
Confidence 799999999999988777664 57899964311 111 1 11211 1 00124678999997421
Q ss_pred -------CCC---------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccc
Q 005774 431 -------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 482 (677)
Q Consensus 431 -------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~ 482 (677)
+.. .+..+.|++|.+...+|... ....+++..|++.-+.-
T Consensus 179 N~~~~~~g~~~faNPRNaAAGsLRqld~~ita~R~L~ff~y~~~~~~~~~~--~t~~e~l~~L~~~GF~v---------- 246 (318)
T 3jsl_A 179 NEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNA--RSQSEALDELDKLGFTT---------- 246 (318)
T ss_dssp HHHHBTTBCCCCSSHHHHHHHHHSCSCHHHHHHSCCEEEEEEESCCTTCCC--SBHHHHHHHHHHHTCCC----------
T ss_pred HHHHHHhCCccccChHHHHHHHHHccChhhhhhCcceEEEEecccccCCCC--CCHHHHHHHHHHCCCCc----------
Confidence 100 02458999999987766432 46788999998854321
Q ss_pred cCCCCccCCCCCcEEEecceEEchhHHHHHHH---hcccccCCCceEEEEeCCCC------CccCCCCCeEEEccCC
Q 005774 483 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYAR 550 (677)
Q Consensus 483 ~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~---~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~lLKWKp~~ 550 (677)
+|. .-..+ .+..+...++. ....+++..||||++=.+-. |+......-+=||+|.
T Consensus 247 --~~~--------~~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiAyKfp~ 310 (318)
T 3jsl_A 247 --NKN--------RARVN---NIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPA 310 (318)
T ss_dssp --CTT--------CEEES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBTTEEEEECC-
T ss_pred --CCc--------ceEeC---CHHHHHHHHHHHHHHHhcCCCCCCcEEEEEeCHHHHHHhCCCCCCCCceEEECCCC
Confidence 111 11111 12222222322 34688999999999975544 3322234555666553
No 109
>3uq8_A DNA ligase; adenylated protein, ATP-grAsp, rossman fold, adenylation; HET: DNA NAD AMP; 1.70A {Haemophilus influenzae} PDB: 3pn1_A* 3bac_A*
Probab=89.93 E-value=3.6 Score=42.96 Aligned_cols=158 Identities=15% Similarity=0.131 Sum_probs=89.1
Q ss_pred CeEEEEcccceEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCCCcccccCCCCeeeeEEEEEecC-----
Q 005774 365 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 430 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 430 (677)
.|++++|.||.-+-|...++. +..++|-+-.. .++ + ..|...... .......+=||+++.+.
T Consensus 108 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IPl~L~~~----~~p~~leVRGEv~m~~~~F~~l 183 (322)
T 3uq8_A 108 TFCCEPKLDGLAVSILYVNGELTQAATRGDGTTGEDITANIRTIRNVPLQLLTD----NPPARLEVRGEVFMPHAGFERL 183 (322)
T ss_dssp EEEEEEEESSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHHTCTTSCSBCSCS----SCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEeeceEEEEEEEeCCEEEEEEecCCCccchhHHHHHHHhcCCCccccCC----CCCceEEEEEEEEeeHHHHHHH
Confidence 699999999999988777664 57899964311 111 1 112211100 01234678999997431
Q ss_pred -------CCC---------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccc
Q 005774 431 -------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 482 (677)
Q Consensus 431 -------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~ 482 (677)
+.. .+..+.|++|.+...+|... .....+++..|+++-+.
T Consensus 184 N~~~~~~g~~~faNPRNaAAGsLRqld~~ita~R~L~ff~y~~~~~~~~~~-~~t~~e~l~~L~~~Gf~----------- 251 (322)
T 3uq8_A 184 NKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDL-PTTHYARLQWLKSIGIP----------- 251 (322)
T ss_dssp HHHHHHTTCCCCSSHHHHHHHHHTCSCHHHHTTSCCEEEEEEEEEEESCCC-CSBHHHHHHHHHHTTCC-----------
T ss_pred HHHHHHhCCccccchhHHHHHHHhhcChhhhhcCccEEEEEeccccCCCCC-CCCHHHHHHHHHHcCCC-----------
Confidence 110 12458999999987766432 24678899999875321
Q ss_pred cCCCCccCCCCCcEEEecceEEchhHHHHHHH---hcccccCCCceEEEEeCCCCCc------cCCCCCeEEEccCC
Q 005774 483 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDPYV------PRTHEGLLKWKYAR 550 (677)
Q Consensus 483 ~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~---~~~~l~h~~DGLIf~p~~spY~------~G~~~~lLKWKp~~ 550 (677)
-++. ....+ .+..+...++. ....+++..||+|++=.+-++. ......-+=||+|.
T Consensus 252 -v~~~--------~~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiA~Kfpa 316 (322)
T 3uq8_A 252 -VNPE--------IRLCN---GADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPA 316 (322)
T ss_dssp -CCTT--------CEEEE---SHHHHHHHHHHHHHTTTTTSSCEEEEEEEESBHHHHHHHCEETTEETTEEEEECCC
T ss_pred -CCCC--------cEEeC---CHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHcCccCCCCCceEEEcCCc
Confidence 1111 11111 12222222332 3467899999999997554432 22234556666654
No 110
>1xdn_A RNA editing ligase MP52; HET: MSE ATP; 1.20A {Trypanosoma brucei} SCOP: d.142.2.4
Probab=84.40 E-value=5.1 Score=40.68 Aligned_cols=107 Identities=17% Similarity=0.103 Sum_probs=61.9
Q ss_pred hccCCeEEEEcccceEEEEEE--ECCE--EEEEeCCCccccccCcC------CCcC----CCCc-cc----ccCCCCeee
Q 005774 361 LRQRYYYATWKADGTRYMMLI--TIDG--CYLIDRCFNFRRVQMRF------PCRN----SNEG-LG----EKTHHFTLL 421 (677)
Q Consensus 361 l~~~~Y~V~eK~DG~R~ll~i--~~~~--vyLidR~~~~~~v~~~F------P~~~----~~~~-~~----~~~~~~tlL 421 (677)
|....|+|+||.||.-+-+++ +++. +..-.|++-+-.-.-.| |... .... +. .......++
T Consensus 30 l~~~ewvatEKIHGaNFsii~~~d~~~~~i~~akRs~~l~~~e~FfGy~~i~~~l~~~~~~l~~~l~~~~~~~~~~~v~V 109 (277)
T 1xdn_A 30 LAAQEWVACEKVHGTNFGIYLINQGDHEVVRFAKRSGIMDPNENFFGYHILIDEFTAQIRILNDLLKQKYGLSRVGRLVL 109 (277)
T ss_dssp GGGSCEEEEEECCSEEEEEEEEEETTEEEEEEEETTEECCTTCCCTTGGGGHHHHHHHHHHHHHHHHHHHTCSCCSEEEE
T ss_pred CCCCcEEEEEeeccccEEEEEecCCCeeEEEEeecccccCcccccccHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Confidence 455689999999999998888 6666 77888875321001011 0000 0000 00 001245678
Q ss_pred eEEEEEec---------------CC----------CCC-----C-ceeEEEEeEEeecCC---ccccCCCHHHHHHHHHH
Q 005774 422 DGEMIIDK---------------LP----------DSR-----R-QERRYLIYDMMAINQ---ASVIERPFYERWKMLEK 467 (677)
Q Consensus 422 DGElV~d~---------------~~----------~~~-----~-~~~~yliFDiL~~~G---~~l~~~pf~eR~~~L~~ 467 (677)
=||+.--. .+ -.. . ....|++|||...++ .+..-++|.+=...+.+
T Consensus 110 yGELfGg~y~hp~v~~~~~~~~~~~~~~~p~~~~~IQ~~i~~~Y~p~~~FYaFDI~~~~~~~~~~~~~L~fd~~~~~~~~ 189 (277)
T 1xdn_A 110 NGELFGAKYKHPLVPKSEKWCTLPNGKKFPIAGVQIQREPFPQYSPELHFFAFDIKYSVSGAEEDFVLLGYDEFVEFSSK 189 (277)
T ss_dssp EEEEEEEECCCTTSCCCCCEEECTTSCEEEGGGCCSCCCSSCCCEEEEEEEEEEEEEESSCCGGGEEECCHHHHHHHHHT
T ss_pred EEEEecCccCCccccccccccccCccccCcccccccccccccccCCCceEEEEEEEEecCCCccccccCCHHHHHHHHHH
Confidence 99998533 00 000 1 136899999998753 23457888876666665
No 111
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=82.35 E-value=3.1 Score=37.16 Aligned_cols=86 Identities=12% Similarity=0.185 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcE--------EEEEecCCCCCCCCHHHHHHHHHHHHHHHH
Q 005774 124 RYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIK--------HVKIQCKGRDAVPDNASVNNFVYEVTQFLS 195 (677)
Q Consensus 124 r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~--------y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~ 195 (677)
.-++.++.+.+... .+ ..+||++. ++++...|+. -++||... .+ ...|...+...+.
T Consensus 6 ~is~~e~~~~l~~~-~~-~~liDVR~------~~E~~~~~~~~~~g~~~ga~~ip~~~---~~----~~~~~~~l~~~~~ 70 (134)
T 1vee_A 6 SGSAKNAYTKLGTD-DN-AQLLDIRA------TADFRQVGSPNIKGLGKKAVSTVYNG---ED----KPGFLKKLSLKFK 70 (134)
T ss_dssp BCCHHHHHHHHHHC-TT-EEEEECSC------HHHHHHTCEECCTTTSCCCEECCCCG---GG----HHHHHHHHHTTCS
T ss_pred ccCHHHHHHHHHhC-CC-eEEEEcCC------HHHHhhcCCCcccccCCceEEeeccc---cc----ChhHHHHHHHHhC
Confidence 35677777666532 23 36999984 4556554543 45565432 11 1223322211100
Q ss_pred hcccCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 196 RQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 196 ~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
...+..|+|+|..|. ||. .++.+|. ..|+
T Consensus 71 --~~~~~~ivv~C~sG~-RS~-~aa~~L~-~~G~ 99 (134)
T 1vee_A 71 --DPENTTLYILDKFDG-NSE-LVAELVA-LNGF 99 (134)
T ss_dssp --CGGGCEEEEECSSST-THH-HHHHHHH-HHTC
T ss_pred --CCCCCEEEEEeCCCC-cHH-HHHHHHH-HcCC
Confidence 135689999999994 874 4444444 4455
No 112
>1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis}
Probab=81.05 E-value=0.32 Score=51.04 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=79.9
Q ss_pred CCeEEEEcccceEEEEEEECCE-EEEEeCCCccc--ccc------CcCCCcCCCCcccccCCCCeeeeEEEEEecC----
Q 005774 364 RYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ------MRFPCRNSNEGLGEKTHHFTLLDGEMIIDKL---- 430 (677)
Q Consensus 364 ~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~------~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~---- 430 (677)
-.|++++|.||..+-|...++. +..++|-+-.. .|+ -.-|.... .+-.........+-||+++.+.
T Consensus 116 ~~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~-~g~~~~~p~~leVRGEv~m~~~~F~~ 194 (328)
T 1zau_A 116 AHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLT-PGDDYPVPEVLEVRGEVFFRLDDFQA 194 (328)
T ss_dssp SCEEEEEEECSEEEEEECGGGBCCBCBBCTTSSEECBCHHHHHHSSSCCSBCC-CBTTBCCCSCCEEEEEEBCCHHHHHH
T ss_pred cceEEeeecceEEEEEEEECCEEEEEEccCCCcccHHHHHHHHHhcCCChhhc-cCCcCCCCCeEEEEEEEEEEHHHHHH
Confidence 3799999999999977766543 56788843211 111 01122110 0000001233689999997421
Q ss_pred --------CCC---------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhccccc
Q 005774 431 --------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIY 481 (677)
Q Consensus 431 --------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~ 481 (677)
+.. .+..+.|++|++..++|.. -....+++..|+++-+.-
T Consensus 195 lN~~~~~~g~~~faNPRNaAAGsLrqld~~ita~R~L~f~~y~i~~~~~~~--~~t~~e~l~~L~~~Gf~v--------- 263 (328)
T 1zau_A 195 LNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFR--PATLHQAYLALRAWGLPV--------- 263 (328)
T ss_dssp HHHSCSSTTSCCCSSHHHHHHHHHTCSSHHHHHHSCCBCCCCBCCCCSSCC--CSBHHHHHHHHHTTTCCC---------
T ss_pred HHHHHHHcCCccccChHHHHHHHHHccChhhhhcCcceEEEEeccccCCCC--CCCHHHHHHHHHHcCCCC---------
Confidence 110 0134789999996555432 246788888888754321
Q ss_pred ccCCCCccCCCCCcEEEecceEEchhHHHHHHHh---cccccCCCceEEEEeCCCCC
Q 005774 482 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY 535 (677)
Q Consensus 482 ~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY 535 (677)
+|.. +-+-.+..+...++.+ ...+++..||||++-.+..+
T Consensus 264 ---~~~~-----------~~~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~ 306 (328)
T 1zau_A 264 ---SEHT-----------TLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVAL 306 (328)
T ss_dssp ---CCCC-----------CCBCHHHHHHHHHHHTTTTCSSCSSCEEEEEEEECBHHH
T ss_pred ---CCce-----------EEeCCHHHHHHHHHHHHHHHhcCCCCCceEEEEecCHHH
Confidence 1111 0011122333333333 45788999999999765544
No 113
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=80.09 E-value=55 Score=37.51 Aligned_cols=160 Identities=15% Similarity=0.161 Sum_probs=90.5
Q ss_pred CeEEEEcccceEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCCCcccccCCCCeeeeEEEEEecC-----
Q 005774 365 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 430 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 430 (677)
.|++++|.||.-+-|...++. +..++|-+-.. .++ + .-|.... + ........+=||++..+.
T Consensus 109 ~~~~e~KiDGlaisL~Ye~G~Lv~a~TRGDG~~GEdvT~n~rtI~~IP~~l~--~--~~~p~~levRGEv~m~~~~F~~l 184 (671)
T 2owo_A 109 TWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH--G--ENIPARLEVRGEVFLPQAGFEKI 184 (671)
T ss_dssp CEEEEEEESSEEEEEEEETTEEEEEECCTTSSEEEBCHHHHHTCTTSCSBCC--S--SSCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEecceEEEEEEEeCCEEEEEEecCCCcchhhHHHHHhhhcCCCcccc--C--CCCCCeEEEEEEEEEEHHHHHHH
Confidence 799999999999988777664 57889964321 111 1 1122110 0 001223678999997431
Q ss_pred -------CCC---------------------CCceeEEEEeEEeecCC-ccccCCCHHHHHHHHHHHhcCccchhccccc
Q 005774 431 -------PDS---------------------RRQERRYLIYDMMAINQ-ASVIERPFYERWKMLEKEVIEPRNYERHNIY 481 (677)
Q Consensus 431 -------~~~---------------------~~~~~~yliFDiL~~~G-~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~ 481 (677)
+.. .+..+.|++|++...+| ... ....+++..|+++-+.-
T Consensus 185 N~~~~~~g~~~faNpRNaaAGsLrqld~~~~a~R~L~~~~y~~~~~~~~~~~--~t~~e~l~~L~~~Gf~v--------- 253 (671)
T 2owo_A 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP--DTHLGRLLQFKKWGLPV--------- 253 (671)
T ss_dssp HHHHHHSSCCCCSCHHHHHHHHHTCSCHHHHHTSCCEEEEEEEEEEESSCCC--SBHHHHHHHHHHHTCCC---------
T ss_pred HHHHHhcCCCcccChHHHHHHHHHhcChhhHhcCCCEEEEEECcccCCCCCC--CCHHHHHHHHHHCCCCC---------
Confidence 110 13568999999965554 322 46788999998864321
Q ss_pred ccCCCCccCCCCCcEEEecceEEchhHHHHHH---HhcccccCCCceEEEEeCCCC------CccCCCCCeEEEccCCCc
Q 005774 482 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK---EFIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYARMN 552 (677)
Q Consensus 482 ~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~---~~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~lLKWKp~~~n 552 (677)
+|.. -..+ .+..+...++ +....+++..||+|++=.+-+ |+......-+=||+|...
T Consensus 254 ---~~~~--------~~~~---~~~~v~~~~~~~~~~R~~l~y~iDGvViKv~~~~~q~~LG~t~k~PrWAiA~Kfpae~ 319 (671)
T 2owo_A 254 ---SDRV--------TLCE---SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 (671)
T ss_dssp ---CTTC--------EEES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECCCCE
T ss_pred ---CCcc--------eeeC---CHHHHHHHHHHHHHHHhcCCCCCccEEEEecCHHHHHHhCcccCCCCceEEEcCCCce
Confidence 1110 1111 1222222222 235688999999999975543 333334455667776554
Q ss_pred e
Q 005774 553 S 553 (677)
Q Consensus 553 T 553 (677)
-
T Consensus 320 ~ 320 (671)
T 2owo_A 320 Q 320 (671)
T ss_dssp E
T ss_pred E
Confidence 3
No 114
>3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis}
Probab=76.63 E-value=17 Score=41.24 Aligned_cols=160 Identities=13% Similarity=0.104 Sum_probs=89.5
Q ss_pred CeEEEEcccceEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCCCcccccCCCCeeeeEEEEEecC-----
Q 005774 365 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 430 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 430 (677)
.|++++|.||.=+-|...++. +..++|-+-.. .++ + .-|......+. ........+=||++..+.
T Consensus 117 ~~~~EpKiDGlavsL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~~~~~-~~~p~~levRGEv~m~~~~F~~l 195 (615)
T 3sgi_A 117 HYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDD-YPVPEVLEVRGEVFFRLDDFQAL 195 (615)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEECCTTSSSCBCCHHHHHSCSSSCSSCCCCSS-CCCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEEecceEEEEEEECCEEEEEEecCCCcchhhHHHHHHhhcCcchhhcCCcc-cCCCCeEEEEEEEEEeHHHHHHH
Confidence 799999999999988777665 57889954311 111 1 12221100000 001234678999997421
Q ss_pred -------CC------------------C---CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccc
Q 005774 431 -------PD------------------S---RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 482 (677)
Q Consensus 431 -------~~------------------~---~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~ 482 (677)
+. . .+..+.|++|.+...+|... ....+++..|+++-+.-
T Consensus 196 N~~~~~~g~~~faNpRNaAAGsLRqld~~ita~R~L~~f~y~~~~~~~~~~--~t~~e~l~~L~~~Gf~v---------- 263 (615)
T 3sgi_A 196 NASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRP--ATLHQAYLALRAWGLPV---------- 263 (615)
T ss_dssp HTTCSSSSSCCCSSHHHHHHHHHTCSSTTHHHHSCCEEEEEEEEEEESCCC--SBTTTHHHHHHHTTCCC----------
T ss_pred HHHHHHcCCCcCCChHHHHHHHHHcCChhhHhhCcceEEEEeccccCCCCC--cCHHHHHHHHHHCCCCC----------
Confidence 10 0 02457999999987765432 24567888888753211
Q ss_pred cCCCCccCCCCCcEEEecceEEchhHHHHHH---Hh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEccCC
Q 005774 483 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK---EF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYAR 550 (677)
Q Consensus 483 ~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~---~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~lLKWKp~~ 550 (677)
++.. ....+++.+.+ .+ ...+++..||+|++=.+-++ +......-+=||+|.
T Consensus 264 --~~~~--------------~~~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~lG~t~k~PRWAiA~Kfpa 327 (615)
T 3sgi_A 264 --SEHT--------------TLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPP 327 (615)
T ss_dssp --CCCC--------------CCBSSHHHHHHHHTTTTTSGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECCC
T ss_pred --CCCe--------------EeeCCHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCHHHHHHhCCCCCCCCceEEEcCCC
Confidence 1110 01223344433 22 35789999999999755443 333334566677765
Q ss_pred Cce
Q 005774 551 MNS 553 (677)
Q Consensus 551 ~nT 553 (677)
..-
T Consensus 328 ee~ 330 (615)
T 3sgi_A 328 EEA 330 (615)
T ss_dssp SEE
T ss_pred cee
Confidence 533
No 115
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=70.77 E-value=60 Score=37.14 Aligned_cols=161 Identities=13% Similarity=0.100 Sum_probs=85.3
Q ss_pred CeEEEEcccceEEEEEEECCEEEEEeCCCccc--cccCcCCCcCC-CCcccccCCCCeeeeEEEEEecC-----------
Q 005774 365 YYYATWKADGTRYMMLITIDGCYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL----------- 430 (677)
Q Consensus 365 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~----------- 430 (677)
.|++++|.||.-+ |...++. ..++|-+-.. .++.......+ +..+... .....+=||++..+.
T Consensus 110 ~~~~e~KiDGlai-L~Ye~G~-~a~TRGDG~~GedvT~n~rtI~~iP~~l~~~-p~~levRGEv~m~~~~F~~lN~~~~~ 186 (667)
T 1dgs_A 110 LYTVEHKVDGLSV-LYYEEGV-WSTGSGDGEVGEEVTQNLLTIPTIPRRLKGV-PDRLEVRGEVYMPIEAFLRLNEELEE 186 (667)
T ss_dssp EEEEEECCSCEEE-EEEETTE-EEEEECSSSEEEBCTGGGTSSTTSCSBCSSC-CSEEEEEEEEECCHHHHHHHHHHHHH
T ss_pred eEEEEEccceeEE-EEEcCCC-EEEeeCCCcchhhHHHHHhhhcCCCcccCCC-CCeEEEEEEEEEEHHHHHHHHHHHHh
Confidence 6999999999999 6666666 8899964321 11111100000 0111000 122578999997431
Q ss_pred -CCC---------------------CCcee--EEEEeEEee-cCCccccCCCHHHHHHHHHHHhcCccchhcccccccCC
Q 005774 431 -PDS---------------------RRQER--RYLIYDMMA-INQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRN 485 (677)
Q Consensus 431 -~~~---------------------~~~~~--~yliFDiL~-~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~ 485 (677)
+.. .+..+ .|++|+++. .++.. -....+++..|+++-+.- +
T Consensus 187 ~g~~~faNpRNaaAGsLrqld~~~~a~r~L~~~~~~y~~~~~~~~~~--~~t~~e~l~~L~~~Gf~v------------~ 252 (667)
T 1dgs_A 187 RGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGLEESG--LKSQYELLLWLKEKGFPV------------E 252 (667)
T ss_dssp HTCCCCSSHHHHHHHHHSCSSHHHHHHSCCEEECCCBCTTTTTTSCC--CCBHHHHHHHHHHTTCCC------------C
T ss_pred cCCCcccChHHHHHHHHHhcChhhhhhCCCCCEEEEEEeeccCCCCC--CCCHHHHHHHHHHCCCCC------------C
Confidence 110 02457 899998741 23221 246788888888754311 1
Q ss_pred CCccCCCCCcEEEecceEEchhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEccCCCce
Q 005774 486 PYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYARMNS 553 (677)
Q Consensus 486 p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~lLKWKp~~~nT 553 (677)
|. .+. +-.+..+...++.+ ...+++..||+|++=.+-.+ +......-+=||+|...-
T Consensus 253 ~~---------~~~--~~~~~~v~~~~~~~~~~R~~l~y~iDGvViKv~~~~~q~~LG~t~k~PrWAiA~Kfpae~~ 318 (667)
T 1dgs_A 253 HC---------YEK--ALGAEGVEEVYRRGLAQRHALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEEK 318 (667)
T ss_dssp SC---------EEE--EEHHHHHHHHHHHHHHTTTTSSSCCCEEEEEESBTHHHHHSCBCSSCBSSEEEEECCCCCE
T ss_pred cc---------ceE--eCCHHHHHHHHHHHHHHHhcCCCCCCcEEEEecCHHHHHHhCcccCCCCceEEecCCCceE
Confidence 11 111 11122222223322 46889999999999755443 333334556667665543
No 116
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=61.27 E-value=9.6 Score=42.26 Aligned_cols=26 Identities=27% Similarity=0.432 Sum_probs=21.0
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHH
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLM 224 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm 224 (677)
..|..|+|||..|..||.-+++.-.+
T Consensus 327 ~~g~sVLVhcsDGwDrT~ql~SLaql 352 (512)
T 2yf0_A 327 VENASVLVHCSDGWDRTSQVCSLGSL 352 (512)
T ss_dssp TTCCCEEECTTTSSSHHHHHHHHHHH
T ss_pred hCCCeEEEECCCCccccHHHHHHHHH
Confidence 46889999999999999877654433
No 117
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=57.63 E-value=14 Score=41.23 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=19.8
Q ss_pred CCceEEEEcCCCCChhHHHHHHHHH
Q 005774 200 SKKYILVHCTHGHNRTGYMIVHFLM 224 (677)
Q Consensus 200 ~~~~VlVHC~~G~~RTG~li~aYLm 224 (677)
.+..|+|||..|..||.-+++.-.+
T Consensus 340 ~~~sVLvhcsdGwDrT~ql~SLaql 364 (528)
T 1zsq_A 340 GKTSVVVHSSDGWDRTAQLTSLAML 364 (528)
T ss_dssp TCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CCceEEEECCCCccchHHHHHHHHH
Confidence 3469999999999999987655433
No 118
>2c5u_A RNA ligase, T4 RNA ligase 1; nucleotidyl transferase, ATP-binding; HET: APC; 2.21A {Bacteriophage T4}
Probab=53.04 E-value=25 Score=37.37 Aligned_cols=101 Identities=10% Similarity=-0.043 Sum_probs=60.1
Q ss_pred cCCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCc-CC--CCc---cc-ccCCCCeeeeEEEEEecCCCC-C
Q 005774 363 QRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCR-NS--NEG---LG-EKTHHFTLLDGEMIIDKLPDS-R 434 (677)
Q Consensus 363 ~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~-~~--~~~---~~-~~~~~~tlLDGElV~d~~~~~-~ 434 (677)
..+|.|++|.||.=+..+..++.+++.+|..-...-..++... .. ... +. +-...+..+=||++....+.. .
T Consensus 92 ~~pv~V~eK~DGslv~~~~~~G~l~~~SKgs~~~~~a~~~~~~l~~~~~~~l~~~~~~l~~~~~t~~fE~~~pen~hVl~ 171 (375)
T 2c5u_A 92 NDVDYILTKEDGSLVSTYLDGDEILFKSKGSIKSEQALMANGILMNINHHRLRDRLKELAEDGFTANFEFVAPTNRIVLA 171 (375)
T ss_dssp GGEEEEEEECCSEEEEEEEETTEEEEEETTBSSSHHHHHHHHHHHSGGGHHHHHHHHHHHHTTEEEEEEEECTTSCSSSC
T ss_pred CCCEEEEEecCCeEEEEEEECCEEEEEeCCCCCChHHHHHHHHHhhhcchHHHHHHHHhcCCCCEEEEEEcCCCCceecc
Confidence 4689999999999988878888999999985321000000100 00 000 00 011356667799997543211 1
Q ss_pred CceeEEEEeEEeecC-CccccCCCHHHHHHHHH
Q 005774 435 RQERRYLIYDMMAIN-QASVIERPFYERWKMLE 466 (677)
Q Consensus 435 ~~~~~yliFDiL~~~-G~~l~~~pf~eR~~~L~ 466 (677)
...+.+++||+.... |+- +|+.++.+..+
T Consensus 172 Y~~~~L~L~~i~~n~tg~~---l~~~e~~~~a~ 201 (375)
T 2c5u_A 172 YQEMKIILLNVRENETGEY---ISYDDIYKDAT 201 (375)
T ss_dssp CSSCEEEEEEEEETTTCCB---CCHHHHHHCTT
T ss_pred CCCCCEEEEEEEEcCCCcE---ecHHHHHHHHh
Confidence 123679999998865 544 78888765443
No 119
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=52.68 E-value=18 Score=41.23 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=19.8
Q ss_pred CCceEEEEcCCCCChhHHHHHHHHH
Q 005774 200 SKKYILVHCTHGHNRTGYMIVHFLM 224 (677)
Q Consensus 200 ~~~~VlVHC~~G~~RTG~li~aYLm 224 (677)
.+..|||||..|..||.-+++.-.+
T Consensus 412 ~~~sVLVhcsDGwDrT~qlsSLaQL 436 (657)
T 1lw3_A 412 GKTSVVVHSSDGWDRTAQLTSLAML 436 (657)
T ss_dssp TCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CCceEEEECCCCccchHHHHHHHHH
Confidence 3459999999999999987655433
No 120
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=50.99 E-value=14 Score=31.51 Aligned_cols=29 Identities=17% Similarity=0.510 Sum_probs=19.6
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s 230 (677)
.++..|+|+|.+| +||.. ++.+| ...|++
T Consensus 54 ~~~~~ivv~C~~G-~rS~~-aa~~L-~~~G~~ 82 (103)
T 3iwh_A 54 NKNEIYYIVCAGG-VRSAK-VVEYL-EANGID 82 (103)
T ss_dssp CTTSEEEEECSSS-SHHHH-HHHHH-HTTTCE
T ss_pred cCCCeEEEECCCC-HHHHH-HHHHH-HHcCCC
Confidence 4578999999988 57753 44444 456763
No 121
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=49.78 E-value=15 Score=31.65 Aligned_cols=23 Identities=30% Similarity=0.352 Sum_probs=15.9
Q ss_pred ceEEEEcCCCCChhHHHHHHHHHHh
Q 005774 202 KYILVHCTHGHNRTGYMIVHFLMRS 226 (677)
Q Consensus 202 ~~VlVHC~~G~~RTG~li~aYLm~~ 226 (677)
..|+|+|..| .||. .++.+|...
T Consensus 73 ~~ivv~C~~G-~rs~-~a~~~L~~~ 95 (127)
T 3i2v_A 73 VPIYVICKLG-NDSQ-KAVKILQSL 95 (127)
T ss_dssp EEEEEECSSS-SHHH-HHHHHHHHH
T ss_pred CeEEEEcCCC-CcHH-HHHHHHHHh
Confidence 4899999988 4665 455555543
No 122
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=43.87 E-value=17 Score=30.31 Aligned_cols=28 Identities=14% Similarity=0.424 Sum_probs=18.3
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
.++..|+|+|..| .||. .++ .++...|+
T Consensus 54 ~~~~~ivvyC~~g-~rs~-~a~-~~L~~~G~ 81 (100)
T 3foj_A 54 NDNETYYIICKAG-GRSA-QVV-QYLEQNGV 81 (100)
T ss_dssp CTTSEEEEECSSS-HHHH-HHH-HHHHTTTC
T ss_pred CCCCcEEEEcCCC-chHH-HHH-HHHHHCCC
Confidence 3568999999888 5654 344 44455565
No 123
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=43.64 E-value=15 Score=32.47 Aligned_cols=28 Identities=14% Similarity=0.274 Sum_probs=18.9
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
..+..|+|+|..| .||.. +++++...|+
T Consensus 84 ~~~~~ivvyC~~G-~rs~~--a~~~L~~~G~ 111 (139)
T 2hhg_A 84 QEDKKFVFYCAGG-LRSAL--AAKTAQDMGL 111 (139)
T ss_dssp GSSSEEEEECSSS-HHHHH--HHHHHHHHTC
T ss_pred CCCCeEEEECCCC-hHHHH--HHHHHHHcCC
Confidence 4568999999998 47653 3444445565
No 124
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=41.96 E-value=51 Score=33.80 Aligned_cols=91 Identities=5% Similarity=0.061 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecC------CCCCCCCHHHHHHHHHHHHHHHHhcc
Q 005774 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCK------GRDAVPDNASVNNFVYEVTQFLSRQK 198 (677)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~------d~~~~P~~e~i~~f~~~v~~fi~~~~ 198 (677)
-++++|.+.+. ..+ ..|||++.....|....+. | -+.+|+. ..+..|+.+.+...+..+ ..
T Consensus 42 is~~~l~~~l~--~~~-~~iiDvR~~~e~y~~gHIp--G--Ai~ip~~~~~~~~~~~~~~~~~~~~~~l~~l------gi 108 (318)
T 3hzu_A 42 VTADWLSAHMG--APG-LAIVESDEDVLLYDVGHIP--G--AVKIDWHTDLNDPRVRDYINGEQFAELMDRK------GI 108 (318)
T ss_dssp ECHHHHHHHTT--CTT-EEEEECCSSTTSGGGCBCT--T--EEECCHHHHHBCSSSSSBCCHHHHHHHHHHT------TC
T ss_pred ecHHHHHHhcc--CCC-EEEEECCCChhHHhcCcCC--C--CeEeCchhhhccCcccCCCCHHHHHHHHHHc------CC
Confidence 35666765542 123 5699999643324322222 2 2444431 011355555554443221 03
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s 230 (677)
.++..|+|+|..|..|+. .+++++...|++
T Consensus 109 ~~~~~vVvyc~~g~~~a~--~a~~~L~~~G~~ 138 (318)
T 3hzu_A 109 ARDDTVVIYGDKSNWWAA--YALWVFTLFGHA 138 (318)
T ss_dssp CTTCEEEEECSGGGHHHH--HHHHHHHHTTCS
T ss_pred CCCCeEEEECCCCCccHH--HHHHHHHHcCCC
Confidence 467899999998865654 345666667773
No 125
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=40.06 E-value=19 Score=30.54 Aligned_cols=28 Identities=25% Similarity=0.432 Sum_probs=18.2
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
.++..|+|+|..| .||. . ++.++...|+
T Consensus 53 ~~~~~ivvyC~~G-~rs~-~-aa~~L~~~G~ 80 (108)
T 3gk5_A 53 ERDKKYAVICAHG-NRSA-A-AVEFLSQLGL 80 (108)
T ss_dssp CTTSCEEEECSSS-HHHH-H-HHHHHHTTTC
T ss_pred CCCCeEEEEcCCC-cHHH-H-HHHHHHHcCC
Confidence 4567899999887 5654 3 3444455564
No 126
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=39.92 E-value=21 Score=32.07 Aligned_cols=89 Identities=15% Similarity=0.255 Sum_probs=42.1
Q ss_pred CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCC-c-------EEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 005774 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEG-I-------KHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQ 197 (677)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~g-I-------~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~ 197 (677)
++.++.+.+.. +.+ ..|||++. +.++...| | .-+.+|..+....+.. .|...+.+.+.+.
T Consensus 8 s~~el~~~l~~-~~~-~~liDVR~------~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~----~~~~~l~~~l~~~ 75 (148)
T 2fsx_A 8 TPLQAWEMLSD-NPR-AVLVDVRC------EAEWRFVGVPDLSSLGREVVYVEWATSDGTHND----NFLAELRDRIPAD 75 (148)
T ss_dssp CHHHHHHHHHH-CTT-CEEEECSC------HHHHHHTCEECCGGGTCCCEECCSBCTTSCBCT----THHHHHHHHCC--
T ss_pred CHHHHHHHHhc-CCC-eEEEECCC------HHHHHhcCCCccccCCCCcEEeeeeccccccCH----HHHHHHHHHHhhc
Confidence 56677766543 223 36999984 34555422 2 2356666431000111 1222222222100
Q ss_pred -ccCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 198 -KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 198 -~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
..++..|+|+|..| +||. .+ +.++...|+
T Consensus 76 ~~~~~~~ivvyC~~G-~rS~-~a-a~~L~~~G~ 105 (148)
T 2fsx_A 76 ADQHERPVIFLCRSG-NRSI-GA-AEVATEAGI 105 (148)
T ss_dssp -----CCEEEECSSS-STHH-HH-HHHHHHTTC
T ss_pred cCCCCCEEEEEcCCC-hhHH-HH-HHHHHHcCC
Confidence 13567899999998 4775 33 444444565
No 127
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=39.31 E-value=27 Score=29.12 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=18.5
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
.++..|+|+|..| .||.. ++.++...|+
T Consensus 54 ~~~~~iv~yC~~g-~rs~~--a~~~L~~~G~ 81 (103)
T 3eme_A 54 NKNEIYYIVCAGG-VRSAK--VVEYLEANGI 81 (103)
T ss_dssp CTTSEEEEECSSS-SHHHH--HHHHHHTTTC
T ss_pred CCCCeEEEECCCC-hHHHH--HHHHHHHCCC
Confidence 4568999999988 56543 3444455565
No 128
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=38.77 E-value=39 Score=34.07 Aligned_cols=86 Identities=15% Similarity=0.149 Sum_probs=45.3
Q ss_pred CCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 005774 122 GKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSK 201 (677)
Q Consensus 122 ~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~ 201 (677)
...-++.++.+.+. .+=..|||+++. .++.. -+|| |--.+|. ..+..|...+...+. ..++
T Consensus 121 ~~~Is~~el~~ll~---~~~~vlIDVR~~------~Ey~~-----GHIp--GAiniP~-~~~~~~~~~l~~~l~--~~kd 181 (265)
T 4f67_A 121 GTYLSPEEWHQFIQ---DPNVILLDTRND------YEYEL-----GTFK--NAINPDI-ENFREFPDYVQRNLI--DKKD 181 (265)
T ss_dssp TCEECHHHHHHHTT---CTTSEEEECSCH------HHHHH-----EEET--TCBCCCC-SSGGGHHHHHHHHTG--GGTT
T ss_pred CceECHHHHHHHhc---CCCeEEEEeCCc------hHhhc-----CcCC--CCEeCCH-HHHHhhHHHHHHhhh--hCCC
Confidence 34457777776553 223568999843 34442 2232 2112332 233333333333333 2467
Q ss_pred ceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 202 KYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 202 ~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
..|+|+|+.|. ||. .++.+|.. .|+
T Consensus 182 k~IVvyC~~G~-RS~-~Aa~~L~~-~Gf 206 (265)
T 4f67_A 182 KKIAMFCTGGI-RCE-KTTAYMKE-LGF 206 (265)
T ss_dssp SCEEEECSSSH-HHH-HHHHHHHH-HTC
T ss_pred CeEEEEeCCCh-HHH-HHHHHHHH-cCC
Confidence 89999999874 654 55555554 465
No 129
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=38.34 E-value=22 Score=31.67 Aligned_cols=79 Identities=18% Similarity=0.162 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhh-CC--c-EEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccC
Q 005774 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKK-EG--I-KHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHS 200 (677)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~-~g--I-~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~ 200 (677)
-++.++.+.+... .+ ..|||++. +.++.. .. | .-+++|... .+.. ..+.. ..+
T Consensus 25 is~~el~~~l~~~-~~-~~liDVR~------~~E~~~~gh~~IpgAinip~~~---l~~~-----------~~~~~-l~~ 81 (137)
T 1qxn_A 25 LSPKDAYKLLQEN-PD-ITLIDVRD------PDELKAMGKPDVKNYKHMSRGK---LEPL-----------LAKSG-LDP 81 (137)
T ss_dssp ECHHHHHHHHHHC-TT-SEEEECCC------HHHHHHTCEECCSSEEECCTTT---SHHH-----------HHHHC-CCT
T ss_pred cCHHHHHHHHhcC-CC-eEEEECCC------HHHHHhcCCcCCCCCEEcchHH---hhhH-----------Hhhcc-CCC
Confidence 4577777666532 22 36999984 344543 21 2 224555432 1110 01221 345
Q ss_pred CceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 201 KKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 201 ~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
+..|+|+|..|. ||.. ++.+| ...|+
T Consensus 82 ~~~ivvyC~~G~-rS~~-aa~~L-~~~G~ 107 (137)
T 1qxn_A 82 EKPVVVFCKTAA-RAAL-AGKTL-REYGF 107 (137)
T ss_dssp TSCEEEECCSSS-CHHH-HHHHH-HHHTC
T ss_pred CCeEEEEcCCCc-HHHH-HHHHH-HHcCC
Confidence 789999999995 7654 44444 44565
No 130
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=36.63 E-value=26 Score=30.49 Aligned_cols=81 Identities=22% Similarity=0.252 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceE
Q 005774 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI 204 (677)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~V 204 (677)
-++.++.+.+.....+ ..|||++....|| .. | +|| |--.+|- ..+.. .+.. ..++..|
T Consensus 17 is~~el~~~l~~~~~~-~~liDvR~~~e~~-----~~-g----hIp--gA~nip~-~~l~~-------~~~~-l~~~~~i 74 (124)
T 3flh_A 17 IDHHTVLADMQNATGK-YVVLDVRNAPAQV-----KK-D----QIK--GAIAMPA-KDLAT-------RIGE-LDPAKTY 74 (124)
T ss_dssp ECHHHHHHHHHHTCCC-EEEEECCCSCHHH-----HC-C----EET--TCEECCH-HHHHH-------HGGG-SCTTSEE
T ss_pred ecHHHHHHHHHcCCCC-EEEEECCCHHHHH-----hc-C----cCC--CCEECCH-HHHHH-------HHhc-CCCCCeE
Confidence 3567777766542222 4799998543221 21 2 222 2112442 22222 2222 2457899
Q ss_pred EEEcCCCCChh-HHHHHHHHHHhcCC
Q 005774 205 LVHCTHGHNRT-GYMIVHFLMRSQSM 229 (677)
Q Consensus 205 lVHC~~G~~RT-G~li~aYLm~~~~~ 229 (677)
+|+|..|. |+ +..++..| ...|+
T Consensus 75 vvyC~~g~-r~~s~~a~~~L-~~~G~ 98 (124)
T 3flh_A 75 VVYDWTGG-TTLGKTALLVL-LSAGF 98 (124)
T ss_dssp EEECSSSS-CSHHHHHHHHH-HHHTC
T ss_pred EEEeCCCC-chHHHHHHHHH-HHcCC
Confidence 99999995 65 34444444 44565
No 131
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=34.38 E-value=73 Score=25.27 Aligned_cols=28 Identities=18% Similarity=0.373 Sum_probs=18.5
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
.++..|+|+|..|. ||. .++.+| ...|+
T Consensus 39 ~~~~~ivv~C~~g~-rs~-~aa~~L-~~~G~ 66 (85)
T 2jtq_A 39 DKNDTVKVYCNAGR-QSG-QAKEIL-SEMGY 66 (85)
T ss_dssp CTTSEEEEEESSSH-HHH-HHHHHH-HHTTC
T ss_pred CCCCcEEEEcCCCc-hHH-HHHHHH-HHcCC
Confidence 45789999999883 654 344444 44565
No 132
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=33.33 E-value=48 Score=34.73 Aligned_cols=82 Identities=16% Similarity=0.251 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHcCCCeeEEEEcCCCC---------CCC--CcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHH
Q 005774 126 SFKQVIHQLRVLGRKLGLVIDLTNTT---------RYY--PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFL 194 (677)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~---------~~y--~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi 194 (677)
+++.|+++++++|.++++.++--... .++ +.+.+.+.||.|+|+-....+.. .....+ ..+.+-|
T Consensus 75 Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~~~---~~~~~y-~~~~~al 150 (362)
T 1uas_A 75 GIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGR---SVMERY-TRMSNAM 150 (362)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTC---CHHHHH-HHHHHHH
T ss_pred cHHHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECccCCCCC---CHHHHH-HHHHHHH
Confidence 68899999999999999998864311 111 22457789999999987654222 223333 2344445
Q ss_pred HhcccCCceEEEE-cCCCCCh
Q 005774 195 SRQKHSKKYILVH-CTHGHNR 214 (677)
Q Consensus 195 ~~~~~~~~~VlVH-C~~G~~R 214 (677)
.+ .+..|+++ |..|-..
T Consensus 151 ~~---~~~~i~~~~c~~g~~~ 168 (362)
T 1uas_A 151 KT---YGKNIFFSLCEWGKEN 168 (362)
T ss_dssp HH---HCTTSEEEEESTTTTC
T ss_pred Hh---hCCCcEEEecCCCCCC
Confidence 42 34556776 9877543
No 133
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=29.61 E-value=42 Score=33.18 Aligned_cols=29 Identities=21% Similarity=0.509 Sum_probs=0.0
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s 230 (677)
.++..|+|+|..| .||. .+++++...|++
T Consensus 221 ~~~~~ivvyC~~G-~rs~--~a~~~L~~~G~~ 249 (271)
T 1e0c_A 221 TPDKEIVTHCQTH-HRSG--LTYLIAKALGYP 249 (271)
T ss_dssp CTTSEEEEECSSS-SHHH--HHHHHHHHTTCS
T ss_pred CCCCCEEEECCch-HHHH--HHHHHHHHcCCC
No 134
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=29.52 E-value=46 Score=29.72 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEE
Q 005774 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYIL 205 (677)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~Vl 205 (677)
++.+|.+.+.. +..=..|||++. +.++... +|| |--.+|-. .+.. .+.....++..|+
T Consensus 3 s~~el~~~l~~-~~~~~~liDvR~------~~e~~~g-----hIp--gAi~ip~~-~l~~-------~~~~~l~~~~~iv 60 (141)
T 3ilm_A 3 DAHVLKSRLEW-GEPAFTILDVRD------RSTYNDG-----HIM--GAMAMPIE-DLVD-------RASSSLEKSRDIY 60 (141)
T ss_dssp CHHHHHHHHHH-SCSCEEEEECSC------HHHHHHC-----EET--TCEECCGG-GHHH-------HHHTTSCTTSEEE
T ss_pred CHHHHHHHHhc-CCCCEEEEECCC------HHHHhCC-----CCC--CCEEcCHH-HHHH-------HHHhcCCCCCeEE
Confidence 45667666653 222246999983 3455431 222 21124432 2222 1211234567899
Q ss_pred EEcCCCCChhHHHHHHHHHHhcCC
Q 005774 206 VHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 206 VHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
|.|..| .||. .+ ++++...|+
T Consensus 61 vyC~~g-~rs~-~a-a~~L~~~G~ 81 (141)
T 3ilm_A 61 VYGAGD-EQTS-QA-VNLLRSAGF 81 (141)
T ss_dssp EECSSH-HHHH-HH-HHHHHHTTC
T ss_pred EEECCC-hHHH-HH-HHHHHHcCC
Confidence 999988 5665 33 444455676
No 135
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=27.98 E-value=89 Score=26.04 Aligned_cols=76 Identities=12% Similarity=0.287 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEE
Q 005774 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYIL 205 (677)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~Vl 205 (677)
++.++.+.+.. + + ..|||++. +.++... +|| |--.+|- ..+..+ +.. ..++..|+
T Consensus 8 ~~~~l~~~~~~-~-~-~~liDvR~------~~e~~~g-----hIp--gA~~ip~-~~l~~~-------~~~-l~~~~~iv 62 (108)
T 1gmx_A 8 NVADAHQKLQE-K-E-AVLVDIRD------PQSFAMG-----HAV--QAFHLTN-DTLGAF-------MRD-NDFDTPVM 62 (108)
T ss_dssp CHHHHHHHHHT-T-C-CEEEECSC------HHHHHHC-----EET--TCEECCH-HHHHHH-------HHH-SCTTSCEE
T ss_pred CHHHHHHHHhC-C-C-CEEEEcCC------HHHHHhC-----CCc--cCEeCCH-HHHHHH-------HHh-cCCCCCEE
Confidence 56677665543 2 3 57999984 3455431 232 2112442 333332 222 24568899
Q ss_pred EEcCCCCChhHHHHHHHHHHhcCC
Q 005774 206 VHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 206 VHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
|+|..|. ||. .++..| ...|+
T Consensus 63 vyc~~g~-rs~-~a~~~L-~~~G~ 83 (108)
T 1gmx_A 63 VMCYHGN-SSK-GAAQYL-LQQGY 83 (108)
T ss_dssp EECSSSS-HHH-HHHHHH-HHHTC
T ss_pred EEcCCCc-hHH-HHHHHH-HHcCC
Confidence 9999985 654 334444 44565
No 136
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=27.17 E-value=54 Score=27.45 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=18.5
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s 230 (677)
..+..|+|+|..| +||. . +++++...|++
T Consensus 50 ~~~~~ivvyc~~g-~rs~-~-a~~~L~~~G~~ 78 (106)
T 3hix_A 50 EKSRDIYVYGAGD-EQTS-Q-AVNLLRSAGFE 78 (106)
T ss_dssp CTTSCEEEECSSH-HHHH-H-HHHHHHHTTCS
T ss_pred CCCCeEEEEECCC-ChHH-H-HHHHHHHcCCc
Confidence 3567899999988 3543 3 34444556763
No 137
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=26.50 E-value=89 Score=28.21 Aligned_cols=86 Identities=6% Similarity=0.078 Sum_probs=40.1
Q ss_pred CCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCc-EEEEEecCCCCCCCCHHHHHHHHHHH-HHHHHhcc
Q 005774 121 PGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI-KHVKIQCKGRDAVPDNASVNNFVYEV-TQFLSRQK 198 (677)
Q Consensus 121 ~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI-~y~~ip~~d~~~~P~~e~i~~f~~~v-~~fi~~~~ 198 (677)
....-++.++.+.++..+.+ -.|||++. +++|....| .-++||.......-..+.+...+... ...+.. .
T Consensus 13 ~~~~i~~~~l~~~l~~~~~~-~~liDvR~------~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~-~ 84 (157)
T 1whb_A 13 EKGAITAKELYTMMTDKNIS-LIIMDARR------MQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKK-R 84 (157)
T ss_dssp CCSEECHHHHHHHHTCSSSC-EEEEEESC------HHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHG-G
T ss_pred cCCccCHHHHHHHHhcCCCC-eEEEECCC------HHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHh-c
Confidence 33455788887766422113 47999984 334444333 23566764221000122232221100 111111 2
Q ss_pred cCCceEEEEcCCCCCh
Q 005774 199 HSKKYILVHCTHGHNR 214 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~R 214 (677)
.....|+|||..|..|
T Consensus 85 ~~~~~VVvy~~~~~~~ 100 (157)
T 1whb_A 85 GNVEYVVLLDWFSSAK 100 (157)
T ss_dssp GTSSEEEEECSSCCGG
T ss_pred CCCCEEEEECCCCCcc
Confidence 2345699999888543
No 138
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=26.28 E-value=63 Score=27.24 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=18.1
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~ 229 (677)
.++..|+|+|..| .||. .++.+| ...|+
T Consensus 54 ~~~~~ivvyC~~G-~rs~-~aa~~L-~~~G~ 81 (110)
T 2k0z_A 54 HKDKKVLLHCRAG-RRAL-DAAKSM-HELGY 81 (110)
T ss_dssp CSSSCEEEECSSS-HHHH-HHHHHH-HHTTC
T ss_pred CCCCEEEEEeCCC-chHH-HHHHHH-HHCCC
Confidence 4678899999988 4654 334444 44554
No 139
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=26.19 E-value=1.3e+02 Score=27.08 Aligned_cols=84 Identities=6% Similarity=0.090 Sum_probs=39.8
Q ss_pred CCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCc-EEEEEecCCCCCCCCHHHHHHHHHHH-HHHHHhcccCC
Q 005774 124 RYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI-KHVKIQCKGRDAVPDNASVNNFVYEV-TQFLSRQKHSK 201 (677)
Q Consensus 124 r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI-~y~~ip~~d~~~~P~~e~i~~f~~~v-~~fi~~~~~~~ 201 (677)
.-++.++.+.++..+.+ ..|||++. +++|....| .-++||.......-+.+.+...+... ...+.+ ....
T Consensus 21 ~is~~~l~~~l~~~~~~-~~liDvR~------~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~-~~~~ 92 (157)
T 2gwf_A 21 AITAKELYTMMTDKNIS-LIIMDARR------MQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKK-RGNV 92 (157)
T ss_dssp EECHHHHHHHHHSTTSC-EEEEECSC------HHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHT-TTTS
T ss_pred ccCHHHHHHHHhcCCCC-eEEEECCC------HHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHh-cCCC
Confidence 34677887766532123 47999984 334444333 23556654221011223333322111 111111 2234
Q ss_pred ceEEEEcCCCCChh
Q 005774 202 KYILVHCTHGHNRT 215 (677)
Q Consensus 202 ~~VlVHC~~G~~RT 215 (677)
..|+|+|..|.+|+
T Consensus 93 ~~VVvy~~~~~~~~ 106 (157)
T 2gwf_A 93 EYVVLLDWFSSAKD 106 (157)
T ss_dssp SEEEEECSSCCGGG
T ss_pred CEEEEEcCCCCccc
Confidence 56999998885433
No 140
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=25.55 E-value=1.4e+02 Score=31.96 Aligned_cols=79 Identities=18% Similarity=0.276 Sum_probs=51.8
Q ss_pred HHHHHHHHHHcCCCeeEEEEcCCC-CC-------CC--CcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHh
Q 005774 127 FKQVIHQLRVLGRKLGLVIDLTNT-TR-------YY--PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSR 196 (677)
Q Consensus 127 ~~~l~~~~~~~~~~I~~VIdLt~~-~~-------~y--~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~ 196 (677)
++.|+++++++|.++|+.++.... .. ++ +.+.|.+.||.|+|+-.-. .+..+....-+..+.+.|.
T Consensus 86 l~~l~~~ih~~Glk~Giw~~~g~~tC~~~pGs~~~~~~da~~fa~WGvDylK~D~C~---~~~~~~~~~~y~~m~~AL~- 161 (404)
T 3hg3_A 86 IRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFAGCY---CDSLENLADGYKHMSLALN- 161 (404)
T ss_dssp HHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHHTCCEEEEECCS---CSCHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCCeeEEEecCCccccCCCCccHHHHHHHHHHHHHhCCcEEEecCcC---CCcchhHHHHHHHHHHHHH-
Confidence 678999999999999999997532 11 11 3456788999999986432 2233323333445556665
Q ss_pred cccCCceEEEEcCCC
Q 005774 197 QKHSKKYILVHCTHG 211 (677)
Q Consensus 197 ~~~~~~~VlVHC~~G 211 (677)
..|.+|+.-|.-|
T Consensus 162 --~tGRpi~~sc~w~ 174 (404)
T 3hg3_A 162 --RTGRSIVYSCEWP 174 (404)
T ss_dssp --HTTCCCEEEECTG
T ss_pred --hcCCCEEEEeCCC
Confidence 3466676679864
No 141
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=24.84 E-value=89 Score=26.75 Aligned_cols=27 Identities=26% Similarity=0.468 Sum_probs=17.3
Q ss_pred CC-ceEEEEcC-CCCChhHHHHHHHHHHhcCC
Q 005774 200 SK-KYILVHCT-HGHNRTGYMIVHFLMRSQSM 229 (677)
Q Consensus 200 ~~-~~VlVHC~-~G~~RTG~li~aYLm~~~~~ 229 (677)
++ ..|+|+|. .| .||. .+++++...|+
T Consensus 87 ~~~~~ivvyC~~~G-~rs~--~a~~~L~~~G~ 115 (134)
T 3g5j_A 87 LNYDNIVIYCARGG-MRSG--SIVNLLSSLGV 115 (134)
T ss_dssp TTCSEEEEECSSSS-HHHH--HHHHHHHHTTC
T ss_pred cCCCeEEEEECCCC-hHHH--HHHHHHHHcCC
Confidence 44 79999995 66 5665 34444455665
No 142
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=22.24 E-value=57 Score=30.21 Aligned_cols=23 Identities=22% Similarity=0.457 Sum_probs=16.7
Q ss_pred ceEEEEcCCCCChhHHHHHHHHHH
Q 005774 202 KYILVHCTHGHNRTGYMIVHFLMR 225 (677)
Q Consensus 202 ~~VlVHC~~G~~RTG~li~aYLm~ 225 (677)
..|+|||..|-.|+... |.+|..
T Consensus 105 ~~IVvyC~sG~~Rs~~a-a~~l~~ 127 (169)
T 3f4a_A 105 LNVIFHCMLSQQRGPSA-AMLLLR 127 (169)
T ss_dssp EEEEEECSSSSSHHHHH-HHHHHH
T ss_pred CeEEEEeCCCCCcHHHH-HHHHHH
Confidence 68999999998888643 334443
No 143
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=21.32 E-value=87 Score=27.40 Aligned_cols=90 Identities=17% Similarity=0.279 Sum_probs=45.4
Q ss_pred CCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCc-EEEEEecCCCCC--CCCHHHHHHHHHHHHHHHHh-ccc
Q 005774 124 RYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI-KHVKIQCKGRDA--VPDNASVNNFVYEVTQFLSR-QKH 199 (677)
Q Consensus 124 r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI-~y~~ip~~d~~~--~P~~e~i~~f~~~v~~fi~~-~~~ 199 (677)
.-++.++.+.+.....+ ..|||++.. .++....| .-+++|...... .++.+.+.. .+.. ...
T Consensus 24 ~is~~el~~~l~~~~~~-~~liDvR~~------~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~-------~~~~~~~~ 89 (139)
T 3d1p_A 24 SYSFEDMKRIVGKHDPN-VVLVDVREP------SEYSIVHIPASINVPYRSHPDAFALDPLEFEK-------QIGIPKPD 89 (139)
T ss_dssp ECCHHHHHHHHHHTCTT-EEEEECSCH------HHHHHCCCTTCEECCTTTCTTGGGSCHHHHHH-------HHSSCCCC
T ss_pred eecHHHHHHHHhCCCCC-eEEEECcCH------HHHhCCCCCCcEEcCHHHhhhhccCCHHHHHH-------HHhccCCC
Confidence 35677887766532223 469999843 34443222 235666643210 111112211 1211 123
Q ss_pred CCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005774 200 SKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (677)
Q Consensus 200 ~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s 230 (677)
++..|+|+|..| .||. .++.+| ...|++
T Consensus 90 ~~~~ivvyC~~G-~rs~-~aa~~L-~~~G~~ 117 (139)
T 3d1p_A 90 SAKELIFYCASG-KRGG-EAQKVA-SSHGYS 117 (139)
T ss_dssp TTSEEEEECSSS-HHHH-HHHHHH-HTTTCC
T ss_pred CCCeEEEECCCC-chHH-HHHHHH-HHcCCC
Confidence 568999999998 4654 444444 446663
No 144
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=20.36 E-value=55 Score=36.97 Aligned_cols=89 Identities=16% Similarity=0.264 Sum_probs=52.5
Q ss_pred CCC--CHHHHHHHHHHcCCCeeEEEEcCC------------------CCCCC--CcchhhhCCcEEEEEecCCCCCC--C
Q 005774 123 KRY--SFKQVIHQLRVLGRKLGLVIDLTN------------------TTRYY--PTSDLKKEGIKHVKIQCKGRDAV--P 178 (677)
Q Consensus 123 ~r~--~~~~l~~~~~~~~~~I~~VIdLt~------------------~~~~y--~~~~~~~~gI~y~~ip~~d~~~~--P 178 (677)
.+| +++.|+++++++|.++++.++--. ...+| +.+.+.+.||.|+|+-....+.. -
T Consensus 73 ~~fP~gl~~l~~~i~~~Glk~gi~~~~~~~~~~~~~p~~~~~~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~~~~~~~~~ 152 (614)
T 3a21_A 73 AEWPGGMSAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWCGGDAEGLD 152 (614)
T ss_dssp TTSTTCHHHHHHHHHHTTCEEEEEEESSSSCHHHHSCSSSCCCTTCSCTTCHHHHHHHHHHHTCSEEEEECHHHHHHTCC
T ss_pred cccCCcHHHHHHHHHHCCCeeEEEecCCCccccccCCCCCCCCCchhhHHHHHHHHHHHHHcCCcEEEecccCCcccccc
Confidence 345 689999999999998888887643 11122 23457789999999876432110 0
Q ss_pred CHHHHHHHHHHHHHHHHhcccCCceEEEE-cCCCCCh
Q 005774 179 DNASVNNFVYEVTQFLSRQKHSKKYILVH-CTHGHNR 214 (677)
Q Consensus 179 ~~e~i~~f~~~v~~fi~~~~~~~~~VlVH-C~~G~~R 214 (677)
..+....+.+.+..++. ..+..|++- |..|..|
T Consensus 153 ~~~~y~~~~~al~~~~~---~~gr~i~~s~c~~g~~~ 186 (614)
T 3a21_A 153 AATTYKSISDAVGRAAA---TTGRPLTLSICNWGYQN 186 (614)
T ss_dssp HHHHHHHHHHHHHHHHH---HHSCCCEEEECCTTTTC
T ss_pred hHHHHHHHHHHHHHHHH---hcCCCeEEEecCCccCC
Confidence 11222333333333333 234556665 9888876
No 145
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=20.20 E-value=82 Score=31.26 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=18.8
Q ss_pred cCCceEEEEcCCCCChhHHHHHHHHHH-hcCC
Q 005774 199 HSKKYILVHCTHGHNRTGYMIVHFLMR-SQSM 229 (677)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~-~~~~ 229 (677)
..+..|+|+|..|. ||. . +++++. ..|+
T Consensus 231 ~~~~~ivvyC~~G~-rs~-~-a~~~L~~~~G~ 259 (285)
T 1uar_A 231 TKDKDIVVYCRIAE-RSS-H-SWFVLKYLLGY 259 (285)
T ss_dssp CTTSEEEEECSSHH-HHH-H-HHHHHHTTSCC
T ss_pred CCCCCEEEECCchH-HHH-H-HHHHHHHHcCC
Confidence 45689999999884 653 3 444444 5676
Done!