Query 005777
Match_columns 677
No_of_seqs 516 out of 3483
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 13:37:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005777.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005777hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0046 Ca2+-binding actin-bun 100.0 2E-134 4E-139 1054.7 42.9 617 6-625 1-620 (627)
2 COG5069 SAC6 Ca2+-binding acti 100.0 4.5E-52 9.8E-57 430.9 25.2 576 18-618 17-611 (612)
3 KOG0517 Beta-spectrin [Cytoske 100.0 3.7E-53 8E-58 486.9 14.0 229 388-627 43-277 (2473)
4 KOG0517 Beta-spectrin [Cytoske 100.0 3.9E-45 8.5E-50 421.0 14.5 243 104-374 29-275 (2473)
5 COG5069 SAC6 Ca2+-binding acti 100.0 2.9E-34 6.2E-39 298.6 11.6 422 119-588 5-455 (612)
6 KOG0035 Ca2+-binding actin-bun 100.0 3.8E-32 8.2E-37 306.8 10.7 459 106-622 10-522 (890)
7 KOG0035 Ca2+-binding actin-bun 100.0 4.9E-32 1.1E-36 305.9 3.7 228 381-624 15-251 (890)
8 KOG0046 Ca2+-binding actin-bun 100.0 2.2E-29 4.7E-34 265.3 16.8 225 117-368 382-614 (627)
9 smart00033 CH Calponin homolog 99.6 6.1E-16 1.3E-20 136.7 9.9 101 125-236 2-102 (103)
10 KOG3631 Alpha-parvin and relat 99.6 2.4E-15 5.2E-20 147.4 13.9 236 122-371 89-364 (365)
11 cd00014 CH Calponin homology d 99.6 1.2E-15 2.6E-20 135.9 9.5 104 124-238 2-106 (107)
12 PF00307 CH: Calponin homology 99.6 2E-15 4.3E-20 134.7 10.1 105 516-621 1-108 (108)
13 smart00033 CH Calponin homolog 99.6 1.3E-15 2.9E-20 134.5 8.3 98 395-495 2-102 (103)
14 cd00014 CH Calponin homology d 99.6 5E-15 1.1E-19 131.9 8.5 101 394-497 2-106 (107)
15 PF00307 CH: Calponin homology 99.6 4.6E-15 1E-19 132.3 8.0 101 270-370 1-108 (108)
16 KOG3631 Alpha-parvin and relat 99.5 7.3E-14 1.6E-18 137.0 14.2 222 270-494 92-359 (365)
17 COG5126 FRQ1 Ca2+-binding prot 99.3 5.6E-12 1.2E-16 118.5 6.1 114 14-139 10-124 (160)
18 KOG0027 Calmodulin and related 99.2 4.4E-11 9.5E-16 113.6 7.7 108 18-132 2-114 (151)
19 KOG2046 Calponin [Cytoskeleton 99.1 1.8E-10 3.9E-15 109.9 9.2 106 106-224 8-114 (193)
20 KOG0031 Myosin regulatory ligh 99.1 8.8E-11 1.9E-15 107.1 6.5 103 14-127 22-125 (171)
21 KOG0028 Ca2+-binding protein ( 99.0 6.6E-10 1.4E-14 102.2 6.8 115 15-136 24-139 (172)
22 KOG0030 Myosin essential light 99.0 9.2E-10 2E-14 98.9 7.4 116 17-139 4-124 (152)
23 cd05022 S-100A13 S-100A13: S-1 99.0 1.6E-09 3.4E-14 92.9 7.8 70 21-92 5-77 (89)
24 COG5126 FRQ1 Ca2+-binding prot 98.9 1.6E-09 3.5E-14 102.0 7.2 65 23-90 91-156 (160)
25 smart00027 EH Eps15 homology d 98.9 4E-09 8.6E-14 92.2 9.2 74 17-95 3-77 (96)
26 cd05027 S-100B S-100B: S-100B 98.9 4.1E-09 8.9E-14 90.4 8.7 69 22-92 6-81 (88)
27 KOG0027 Calmodulin and related 98.9 3E-09 6.4E-14 101.1 7.1 66 22-90 83-149 (151)
28 PF11971 CAMSAP_CH: CAMSAP CH 98.9 7.3E-10 1.6E-14 93.7 2.5 79 522-603 1-83 (85)
29 PF13499 EF-hand_7: EF-hand do 98.9 5.2E-09 1.1E-13 84.6 7.1 61 25-88 1-66 (66)
30 cd05026 S-100Z S-100Z: S-100Z 98.9 1.1E-08 2.3E-13 88.9 8.8 71 22-92 8-83 (93)
31 cd05029 S-100A6 S-100A6: S-100 98.8 2.3E-08 5E-13 85.7 8.7 73 20-92 6-81 (88)
32 PTZ00183 centrin; Provisional 98.8 2.2E-08 4.8E-13 95.1 8.3 111 13-130 6-117 (158)
33 KOG0028 Ca2+-binding protein ( 98.7 2.4E-08 5.1E-13 92.1 6.8 66 22-90 104-170 (172)
34 cd05025 S-100A1 S-100A1: S-100 98.7 4.5E-08 9.8E-13 84.8 7.5 68 23-92 8-82 (92)
35 PTZ00184 calmodulin; Provision 98.7 4.4E-08 9.5E-13 91.9 7.0 109 15-130 2-111 (149)
36 cd05031 S-100A10_like S-100A10 98.6 1.1E-07 2.4E-12 82.7 8.3 70 22-91 6-80 (94)
37 cd00213 S-100 S-100: S-100 dom 98.6 9.6E-08 2.1E-12 82.0 7.7 70 20-91 4-80 (88)
38 cd05023 S-100A11 S-100A11: S-1 98.6 2.2E-07 4.8E-12 79.8 8.4 69 21-92 6-82 (89)
39 cd00052 EH Eps15 homology doma 98.6 1.4E-07 3E-12 76.1 6.9 62 26-92 1-63 (67)
40 KOG2046 Calponin [Cytoskeleton 98.6 1.9E-07 4.1E-12 89.5 8.4 89 393-485 25-116 (193)
41 PF14658 EF-hand_9: EF-hand do 98.5 1.7E-07 3.8E-12 74.5 6.3 60 28-90 2-64 (66)
42 PF13833 EF-hand_8: EF-hand do 98.5 2.1E-07 4.7E-12 72.0 6.8 52 36-90 1-53 (54)
43 COG5199 SCP1 Calponin [Cytoske 98.5 4.9E-07 1.1E-11 81.9 7.7 108 118-239 8-117 (178)
44 PF11971 CAMSAP_CH: CAMSAP CH 98.5 5.5E-08 1.2E-12 82.3 1.4 69 285-353 8-84 (85)
45 KOG0041 Predicted Ca2+-binding 98.4 4.9E-07 1.1E-11 86.2 6.5 79 17-98 92-171 (244)
46 cd05030 calgranulins Calgranul 98.3 2E-06 4.2E-11 73.9 7.2 68 22-91 6-80 (88)
47 PLN02964 phosphatidylserine de 98.2 1.8E-06 3.9E-11 98.6 7.3 104 16-131 135-243 (644)
48 KOG0030 Myosin essential light 98.2 2E-06 4.4E-11 77.7 5.8 67 19-89 83-150 (152)
49 cd00051 EFh EF-hand, calcium b 98.2 3.7E-06 7.9E-11 65.5 6.4 60 26-88 2-62 (63)
50 KOG0031 Myosin regulatory ligh 98.1 6.7E-06 1.4E-10 75.6 6.9 64 23-89 100-164 (171)
51 PTZ00183 centrin; Provisional 98.1 9E-06 2E-10 77.1 7.3 64 24-90 90-154 (158)
52 PTZ00184 calmodulin; Provision 98.0 1.2E-05 2.7E-10 75.1 7.4 63 24-89 84-147 (149)
53 KOG0034 Ca2+/calmodulin-depend 98.0 1.5E-05 3.3E-10 77.7 7.2 66 24-91 104-176 (187)
54 KOG0037 Ca2+-binding protein, 98.0 1.3E-05 2.7E-10 78.3 6.2 81 11-94 104-192 (221)
55 KOG0518 Actin-binding cytoskel 97.9 3.2E-08 7E-13 113.9 -15.0 206 396-615 31-246 (1113)
56 COG5199 SCP1 Calponin [Cytoske 97.9 2.7E-05 5.9E-10 70.8 6.7 102 393-499 13-118 (178)
57 cd00252 SPARC_EC SPARC_EC; ext 97.8 4.8E-05 1E-09 68.6 7.1 63 19-88 43-106 (116)
58 KOG0518 Actin-binding cytoskel 97.7 1.7E-07 3.7E-12 108.0 -12.5 194 151-364 45-246 (1113)
59 KOG0036 Predicted mitochondria 97.6 0.00036 7.8E-09 74.0 11.1 70 19-91 9-80 (463)
60 KOG2996 Rho guanine nucleotide 97.6 7E-05 1.5E-09 81.7 5.7 73 151-223 29-103 (865)
61 cd05024 S-100A10 S-100A10: A s 97.6 0.00034 7.3E-09 59.8 8.4 69 22-92 6-78 (91)
62 PF12763 EF-hand_4: Cytoskelet 97.6 0.00016 3.4E-09 63.9 6.6 71 16-91 2-72 (104)
63 PF00036 EF-hand_1: EF hand; 97.5 0.00013 2.8E-09 48.7 3.5 27 25-51 1-28 (29)
64 PF00036 EF-hand_1: EF hand; 97.5 0.00013 2.7E-09 48.8 3.3 29 63-91 1-29 (29)
65 PLN02964 phosphatidylserine de 97.5 0.0003 6.6E-09 80.7 8.6 72 18-92 173-245 (644)
66 KOG0037 Ca2+-binding protein, 97.4 0.00038 8.1E-09 68.2 7.6 99 23-134 56-155 (221)
67 PF06294 DUF1042: Domain of Un 97.4 0.00014 3E-09 69.3 3.4 99 519-624 1-103 (158)
68 PF13405 EF-hand_6: EF-hand do 97.3 0.00022 4.8E-09 48.4 3.4 29 25-56 1-31 (31)
69 KOG0532 Leucine-rich repeat (L 97.3 0.00033 7.3E-09 77.3 6.0 84 127-223 580-668 (722)
70 KOG0044 Ca2+ sensor (EF-Hand s 97.2 0.0018 3.9E-08 63.5 9.7 111 17-138 22-135 (193)
71 KOG0038 Ca2+-binding kinase in 97.2 0.00072 1.6E-08 61.7 5.7 63 26-90 110-177 (189)
72 PF06294 DUF1042: Domain of Un 97.1 0.00079 1.7E-08 64.2 5.9 97 399-497 2-99 (158)
73 KOG0040 Ca2+-binding actin-bun 97.0 0.0012 2.5E-08 79.1 7.2 120 17-139 2246-2378(2399)
74 KOG0377 Protein serine/threoni 96.8 0.0025 5.4E-08 68.0 7.1 68 24-91 547-616 (631)
75 KOG0036 Predicted mitochondria 96.8 0.0025 5.5E-08 67.8 6.7 66 23-91 81-147 (463)
76 KOG0044 Ca2+ sensor (EF-Hand s 96.8 0.0024 5.2E-08 62.6 6.2 68 25-92 101-177 (193)
77 KOG0034 Ca2+/calmodulin-depend 96.7 0.0026 5.7E-08 62.2 5.9 109 16-138 25-136 (187)
78 PF14788 EF-hand_10: EF hand; 96.4 0.01 2.3E-07 44.8 5.9 50 39-91 1-50 (51)
79 PF13202 EF-hand_5: EF hand; P 96.2 0.005 1.1E-07 39.6 3.0 23 26-48 1-24 (25)
80 KOG2996 Rho guanine nucleotide 96.1 0.01 2.2E-07 65.3 6.4 83 398-480 7-101 (865)
81 KOG0532 Leucine-rich repeat (L 95.9 0.018 3.8E-07 64.2 7.0 86 399-484 582-670 (722)
82 KOG0516 Dystonin, GAS (Growth- 95.8 0.0054 1.2E-07 76.0 3.2 107 391-502 72-187 (1047)
83 PRK12309 transaldolase/EF-hand 95.8 0.016 3.4E-07 63.4 6.1 51 24-90 334-385 (391)
84 KOG0042 Glycerol-3-phosphate d 95.6 0.019 4.2E-07 63.5 5.7 82 14-98 583-665 (680)
85 PF13202 EF-hand_5: EF hand; P 95.5 0.017 3.8E-07 37.0 3.2 25 64-88 1-25 (25)
86 KOG0516 Dystonin, GAS (Growth- 95.2 0.01 2.3E-07 73.4 2.6 112 121-243 72-186 (1047)
87 KOG4065 Uncharacterized conser 94.5 0.095 2.1E-06 46.2 6.0 71 15-87 60-142 (144)
88 PF13405 EF-hand_6: EF-hand do 94.0 0.073 1.6E-06 35.9 3.4 27 63-89 1-27 (31)
89 KOG2128 Ras GTPase-activating 94.0 0.1 2.3E-06 63.4 6.9 111 128-254 47-158 (1401)
90 PF10591 SPARC_Ca_bdg: Secrete 93.4 0.05 1.1E-06 48.9 2.3 61 21-86 51-112 (113)
91 smart00054 EFh EF-hand, calciu 92.8 0.1 2.2E-06 33.0 2.6 26 26-51 2-28 (29)
92 smart00054 EFh EF-hand, calciu 92.4 0.14 3E-06 32.3 2.8 28 63-90 1-28 (29)
93 KOG2562 Protein phosphatase 2 92.2 0.84 1.8E-05 49.9 9.8 132 18-175 272-408 (493)
94 KOG4251 Calcium binding protei 91.7 0.12 2.7E-06 51.4 2.6 70 22-93 99-171 (362)
95 KOG4223 Reticulocalbin, calume 89.8 0.42 9.1E-06 49.9 4.6 66 23-91 162-229 (325)
96 KOG1955 Ral-GTPase effector RA 89.3 0.78 1.7E-05 50.2 6.3 74 17-95 224-298 (737)
97 PF09279 EF-hand_like: Phospho 89.3 0.76 1.6E-05 38.6 5.1 64 25-90 1-69 (83)
98 COG5261 IQG1 Protein involved 88.6 0.79 1.7E-05 53.4 6.0 83 128-223 49-132 (1054)
99 PF05517 p25-alpha: p25-alpha 88.4 1.7 3.6E-05 41.4 7.4 68 26-93 1-72 (154)
100 PF13833 EF-hand_8: EF-hand do 87.6 0.7 1.5E-05 35.2 3.5 31 18-51 22-53 (54)
101 KOG4223 Reticulocalbin, calume 86.8 1 2.2E-05 47.2 5.1 67 22-91 75-142 (325)
102 KOG2643 Ca2+ binding protein, 85.5 1.2 2.7E-05 48.3 5.1 71 24-94 233-318 (489)
103 KOG3000 Microtubule-binding pr 85.4 1.9 4E-05 45.2 6.3 93 271-369 18-115 (295)
104 KOG3000 Microtubule-binding pr 84.4 2.9 6.4E-05 43.7 7.2 106 513-625 14-120 (295)
105 KOG2243 Ca2+ release channel ( 84.0 1.4 3E-05 53.3 4.9 58 28-89 4061-4119(5019)
106 PF05622 HOOK: HOOK protein; 83.4 1.5 3.2E-05 52.4 5.2 70 395-465 9-81 (713)
107 KOG4666 Predicted phosphate ac 83.2 0.98 2.1E-05 47.1 3.1 64 23-90 295-359 (412)
108 PF08726 EFhand_Ca_insen: Ca2+ 82.4 0.89 1.9E-05 37.0 1.9 54 24-87 6-66 (69)
109 KOG3866 DNA-binding protein of 82.0 3 6.6E-05 43.2 6.0 97 27-134 247-357 (442)
110 PF13499 EF-hand_7: EF-hand do 77.8 2.9 6.2E-05 33.0 3.5 30 64-93 2-31 (66)
111 KOG1029 Endocytic adaptor prot 77.2 3.2 6.9E-05 48.0 4.8 64 21-89 192-256 (1118)
112 KOG2643 Ca2+ binding protein, 74.1 2.1 4.6E-05 46.6 2.3 57 36-94 401-457 (489)
113 KOG0377 Protein serine/threoni 72.9 10 0.00022 41.4 7.0 62 24-89 464-526 (631)
114 KOG2871 Uncharacterized conser 65.4 2.4 5.2E-05 45.1 0.5 84 10-98 297-382 (449)
115 COG5261 IQG1 Protein involved 64.8 8.2 0.00018 45.4 4.6 97 273-374 49-155 (1054)
116 KOG0751 Mitochondrial aspartat 63.1 7.9 0.00017 42.8 3.8 64 25-94 109-179 (694)
117 cd00252 SPARC_EC SPARC_EC; ext 62.0 10 0.00022 34.2 3.9 26 26-51 82-108 (116)
118 KOG2128 Ras GTPase-activating 61.0 12 0.00025 46.6 5.1 83 398-483 47-132 (1401)
119 cd00051 EFh EF-hand, calcium b 60.9 10 0.00022 28.3 3.2 28 64-91 2-29 (63)
120 cd08540 SAM_PNT-ERG Sterile al 57.7 13 0.00028 30.8 3.4 36 515-554 9-46 (75)
121 cd05029 S-100A6 S-100A6: S-100 57.5 13 0.00028 31.7 3.6 34 15-51 45-79 (88)
122 KOG4251 Calcium binding protei 54.2 23 0.00049 35.8 5.1 59 26-87 283-342 (362)
123 cd08541 SAM_PNT-FLI-1 Sterile 53.8 16 0.00034 31.5 3.4 36 515-554 21-58 (91)
124 cd05026 S-100Z S-100Z: S-100Z 52.3 14 0.0003 31.7 3.0 28 24-51 53-81 (93)
125 PF05622 HOOK: HOOK protein; 52.1 20 0.00044 42.8 5.3 71 124-206 8-81 (713)
126 cd05031 S-100A10_like S-100A10 51.5 9.2 0.0002 32.8 1.7 27 25-51 52-79 (94)
127 cd05022 S-100A13 S-100A13: S-1 51.4 15 0.00033 31.4 3.0 28 24-51 47-75 (89)
128 cd05023 S-100A11 S-100A11: S-1 49.7 21 0.00045 30.5 3.6 28 24-51 52-80 (89)
129 KOG0751 Mitochondrial aspartat 49.2 31 0.00067 38.4 5.5 108 12-128 24-133 (694)
130 KOG0169 Phosphoinositide-speci 48.8 30 0.00064 40.6 5.6 71 21-94 133-204 (746)
131 KOG4666 Predicted phosphate ac 48.7 26 0.00056 37.0 4.7 65 24-90 259-324 (412)
132 cd00052 EH Eps15 homology doma 46.4 21 0.00046 27.7 3.0 27 25-51 34-61 (67)
133 PF14788 EF-hand_10: EF hand; 46.0 29 0.00064 26.4 3.4 27 25-51 22-49 (51)
134 cd05030 calgranulins Calgranul 46.0 21 0.00045 30.3 3.0 28 24-51 51-79 (88)
135 smart00027 EH Eps15 homology d 45.9 34 0.00073 29.3 4.4 29 62-90 10-38 (96)
136 PF03672 UPF0154: Uncharacteri 43.7 30 0.00065 27.7 3.3 34 36-72 28-61 (64)
137 PRK00523 hypothetical protein; 41.5 45 0.00098 27.3 4.0 34 36-72 36-69 (72)
138 cd05025 S-100A1 S-100A1: S-100 41.4 26 0.00057 29.8 3.0 27 25-51 53-80 (92)
139 cd05027 S-100B S-100B: S-100B 40.0 47 0.001 28.3 4.3 28 63-90 9-38 (88)
140 PF00046 Homeobox: Homeobox do 39.3 68 0.0015 24.3 4.8 45 16-69 5-49 (57)
141 cd00213 S-100 S-100: S-100 dom 39.0 40 0.00087 28.2 3.7 29 62-90 8-38 (88)
142 cd00086 homeodomain Homeodomai 38.4 94 0.002 23.4 5.5 46 16-70 5-50 (59)
143 KOG1029 Endocytic adaptor prot 38.1 86 0.0019 37.0 7.0 68 17-89 9-76 (1118)
144 cd08531 SAM_PNT-ERG_FLI-1 Ster 37.8 41 0.0009 27.8 3.4 37 515-554 9-46 (75)
145 TIGR02675 tape_meas_nterm tape 37.5 41 0.00088 27.8 3.4 58 18-84 10-75 (75)
146 KOG0998 Synaptic vesicle prote 37.1 31 0.00066 42.0 3.6 73 17-94 276-349 (847)
147 KOG0041 Predicted Ca2+-binding 36.2 38 0.00083 33.4 3.4 36 59-94 93-131 (244)
148 PRK12309 transaldolase/EF-hand 35.8 46 0.00099 36.7 4.4 32 55-86 327-358 (391)
149 COG3763 Uncharacterized protei 34.0 76 0.0016 25.8 4.2 34 36-72 35-68 (71)
150 PRK01844 hypothetical protein; 33.4 68 0.0015 26.3 3.9 34 36-72 35-68 (72)
151 PF09069 EF-hand_3: EF-hand; 33.2 2.6E+02 0.0056 24.1 7.6 65 24-90 3-75 (90)
152 KOG1707 Predicted Ras related/ 32.6 43 0.00093 38.3 3.6 70 10-88 301-375 (625)
153 PF06395 CDC24: CDC24 Calponin 31.5 55 0.0012 28.1 3.3 62 542-605 8-74 (89)
154 cd08536 SAM_PNT-Mae Sterile al 31.5 65 0.0014 26.0 3.5 35 515-553 6-41 (66)
155 PF08976 DUF1880: Domain of un 31.1 37 0.00081 30.5 2.3 36 58-93 3-38 (118)
156 KOG0038 Ca2+-binding kinase in 30.6 69 0.0015 30.0 3.9 58 55-115 67-124 (189)
157 cd08535 SAM_PNT-Tel_Yan Steril 30.4 66 0.0014 26.1 3.4 36 515-554 7-43 (68)
158 cd08757 SAM_PNT_ESE Sterile al 29.6 71 0.0015 25.8 3.5 35 515-553 6-43 (68)
159 PF07499 RuvA_C: RuvA, C-termi 29.0 1E+02 0.0023 22.8 4.1 40 43-89 4-43 (47)
160 cd08533 SAM_PNT-ETS-1,2 Steril 28.6 81 0.0017 25.9 3.6 36 515-554 8-44 (71)
161 cd08203 SAM_PNT Sterile alpha 27.5 80 0.0017 25.3 3.5 35 515-553 6-41 (66)
162 PF06395 CDC24: CDC24 Calponin 25.7 1.6E+02 0.0035 25.3 5.1 69 152-223 3-74 (89)
163 smart00251 SAM_PNT SAM / Point 24.4 98 0.0021 26.0 3.6 36 515-553 21-56 (82)
164 TIGR01565 homeo_ZF_HD homeobox 23.5 1.2E+02 0.0026 23.8 3.6 41 16-65 6-50 (58)
165 KOG4578 Uncharacterized conser 23.3 52 0.0011 34.8 2.0 69 21-91 330-399 (421)
166 smart00389 HOX Homeodomain. DN 23.3 2.3E+02 0.0049 21.1 5.2 45 17-70 6-50 (56)
167 cd08532 SAM_PNT-PDEF-like Ster 23.0 98 0.0021 25.7 3.2 35 515-553 14-48 (76)
168 PF12763 EF-hand_4: Cytoskelet 22.6 99 0.0021 27.3 3.4 35 14-51 36-71 (104)
169 PF11116 DUF2624: Protein of u 21.9 3.1E+02 0.0068 23.3 6.0 53 38-93 13-65 (85)
170 cd05024 S-100A10 S-100A10: A s 21.9 92 0.002 26.8 2.9 28 24-51 48-76 (91)
171 cd08542 SAM_PNT-ETS-1 Sterile 21.7 1.2E+02 0.0027 25.9 3.6 36 515-554 23-59 (88)
172 PF14658 EF-hand_9: EF-hand do 21.4 1.2E+02 0.0025 24.6 3.2 27 25-51 36-64 (66)
173 KOG3449 60S acidic ribosomal p 21.4 1.7E+02 0.0037 26.0 4.5 53 26-86 3-56 (112)
174 cd08537 SAM_PNT-ESE-1-like Ste 20.0 87 0.0019 26.1 2.3 35 515-553 14-51 (78)
No 1
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=100.00 E-value=1.9e-134 Score=1054.65 Aligned_cols=617 Identities=64% Similarity=1.019 Sum_probs=596.1
Q ss_pred cccccchhhhccCCHHHHHHHHHHhhhhcCCCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHH
Q 005777 6 GVLVSDPWLQSQFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYL 85 (677)
Q Consensus 6 ~~~~~~~~~~~~~t~~e~~~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~ 85 (677)
||+|+|||++++||++|+++|+++|..+|.++|+|+..||..+|.+.+........+|+++++.+.+.|.+|+|+||+|+
T Consensus 1 ~~~v~~~~~~~~~tq~El~~l~~kF~~~d~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~ 80 (627)
T KOG0046|consen 1 GVLVSDPWLQSQLTQEELRELKEKFNKLDDQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFV 80 (627)
T ss_pred CccccchhhcccccHHHHHHHHHHHHhhcCCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHH
Confidence 68999999999999999999999999999999999999999999984444445679999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcC-CCCCCcchhhhhhccccccCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHH
Q 005777 86 RAYLNLQARAAAKSG-GSKNSSSFLKAATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVL 164 (677)
Q Consensus 86 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~ 164 (677)
+++.++++.+.++.+ +.+++++|++.++++++|+|+++|+.+|+.|||++|+.+|+|+|++|++|..++||+.++||++
T Consensus 81 ~~~~~l~s~~~~k~~~g~~~~~~~~~~sst~~~Hti~eeEk~~fv~hIN~~L~~Dpdl~~~lPinp~t~~lf~~vkDGvl 160 (627)
T KOG0046|consen 81 GIFLNLKSKDIAKIGEGIKAASGTLKGSSTGTQHTINEEEKRAFVNHINSYLEGDPDLKHLLPINPNTNDLFDLVKDGVL 160 (627)
T ss_pred HHHHhhhhhhhhhhcCCcccccceeecccccceeeecHHHHHHHHHHHHHHhcCCcchhhcCCCCCchHHHHHHhcccee
Confidence 999999999887765 6889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcccccccccCCCChHHHHHHHHHHHHHHHHcCceeeccCCcccccCchHHHHHHHHHHHHHHHhhccc
Q 005777 165 LCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLN 244 (677)
Q Consensus 165 L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~~G~~~~~i~~~di~~g~~~~iL~Liw~li~~~~~~~i~ 244 (677)
||+|||...|+|||+|.||+++.+++|++.||+++||+.+++.||.+|||+++||.+|++++|||||||||+++++.+|+
T Consensus 161 LcKlIN~svPdTIDERaiN~kk~Lnp~~~~EN~~l~lnSAkAiGc~VvNIga~Dl~eGrphLVLGLiwQiIkiglladi~ 240 (627)
T KOG0046|consen 161 LCKLINLSVPDTIDERAINTKKKLNPFERNENLNLALNSAKAIGCTVVNIGAQDLAEGRPHLVLGLIWQIIKIGLLADIN 240 (627)
T ss_pred eehhhcccCCCchhhhhhccCCcCChhhhccchhhHHhhcccccceEEecCchhhhcCCceeeHHHHHHHHHHHHhhhcc
Confidence 99999999999999999998878999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccccccCCCchhhhhhCCCcHHHHHHHHHHHhhhcCCcccccCCCCCccchHHHHHHHHhhCCCCCCCCCCCCCC
Q 005777 245 LKKTPQLVELVDDNNDVEELLGLPPEKVLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFDTKD 324 (677)
Q Consensus 245 ~~~~p~l~~l~~~~e~~~~~~~~s~~~~LL~Wvn~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~~~~l~~~~ 324 (677)
++.+|++++|+.++|++++++++|||++||||+|+||+++||.++++||++|++||.+|.+|++.++|+.++...+..++
T Consensus 241 l~~~p~L~~Ll~d~e~lEelm~L~PEkiLLrW~N~HL~kag~~k~~~nFs~DikD~eaY~~LLnqlap~~~~~~~l~~~d 320 (627)
T KOG0046|consen 241 LKKNPQLVRLLEDGETLEELMRLPPEKILLRWMNYHLKKAGWKKTVTNFSSDIKDSEAYTHLLNQLAPEHCSPAPLQETD 320 (627)
T ss_pred cccCHHHHHHHhCCccHHHHhcCCHHHHHHHHHHHHHHhcccceehhhhhhhhccHHHHHHHHHHhccccCCccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccccCccccccCCCcchHHHHHHHHHhhcCCCCCccchhhhhhcchhHHhHHhHHHHHHHHHh
Q 005777 325 PTERASKVIEQAEKMDCKRYLTPKDIVEGSPNLNLAFVAHIFQHRNGLSMDSNKISFAEMMTDDAQTSREERCFRLWINS 404 (677)
Q Consensus 325 ~~~~~~~a~~~ae~lgi~~~l~peDi~~~~~~~~l~~va~l~~~~~gl~~~~~~~~~~~~~~~~~~~~~q~~~f~~WiN~ 404 (677)
..+|++.+++.|+++||.++++|.|++.|+|+++++|||++|+++||++.+.+.. .++++..++.+++++|+|+.|+|+
T Consensus 321 ~l~RA~~vLq~Aekl~Cr~~ltp~dvV~G~~kLNLAFVA~lFn~~pgL~~~~~~~-~~e~~~~~~~~~reer~fr~WmNS 399 (627)
T KOG0046|consen 321 DLERAELVLQQAEKLDCRRYLTPTDVVAGNPKLNLAFVANLFNTHPGLEKPENEE-IAEMMTEDEEESREERTFRLWMNS 399 (627)
T ss_pred hHhHHHHHHHHHHhcCCccccCHHHHhcCCchhhHHHHHHhcccCCCCCCccccc-hhcccchhHhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999887543 488999999999999999999999
Q ss_pred hCCCCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCC--CCCchhHHHHHHHHHHHHHHhhccccccccccccccCh
Q 005777 405 LGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKP--PIKMPFRKVENCNQVVKIGKELNFSLVNVAGNDIVQGN 482 (677)
Q Consensus 405 ~~~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~--~~~~~~~~ieN~~~~l~~~k~~g~~~~~i~~~div~g~ 482 (677)
++..++|+++|+|++||++|.+++++++|+.|+|++++|| |.+++++++||||++++.++++++++|||.+.||+|||
T Consensus 400 lgv~p~vn~~f~Dl~dglVllq~~dki~pg~Vnwk~vnKp~~~~~~~~kklENcNyav~lGk~~~FSLVgi~G~DI~dGN 479 (627)
T KOG0046|consen 400 LGVNPYVNNLFEDLRDGLVLLQLYDKVSPGSVNWKHVNKPPSPLKMPFKKVENCNYAVKLGKQLKFSLVGIAGQDIVDGN 479 (627)
T ss_pred cCCcHHHHHHHHhhhhhhHHHHHHHHccCCccchhhccCCCCcccccHHHhhcchHHHHHHhhcceeeeccccccccccc
Confidence 9999999999999999999999999999999999999998 66778999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHHhhhcCCccccccCCCCCCCcHHHHHHHHhhhCCCce
Q 005777 483 KKLILAFLWQLMRFTMLQLLKNLRTHSQGKEITDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVEPRVV 562 (677)
Q Consensus 483 ~kliL~LlW~lir~~~~~~~~~l~~~~~~~~~~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aLi~~~~P~~i 562 (677)
+++||||+|||||+++++++.+++.+ |+.+++++++.|+|++++..|+...|.+|.|++.+||++++.||+++.|+.|
T Consensus 480 k~LtLAlvWQLMR~ytL~vL~~l~~~--~~~~tD~dIv~WaN~klk~~Gk~s~IrSFkD~siS~g~~vLDLidaI~P~~V 557 (627)
T KOG0046|consen 480 KTLTLALVWQLMRRYTLQVLKSLRSG--GKDITDSDIVNWANRKLKKAGKKSQIRSFKDKSISDGLFVLDLLDAIKPGVV 557 (627)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHhhc--CCCCcHHHHHHHHHHHHHhcCCccccccccCcccccCcchHHHHhhcCcCcc
Confidence 99999999999999999999988765 5579999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCCChHhHHhhHHHHHHHHHHcCCCCcCCccccccCCccHHHHHHHHHHHHhhcCCC
Q 005777 563 NWSLVTKGETEEDKKLNATYIISVARKLGCSIFLLPEDIMEVNQKMILILTASIMYWSLQQQS 625 (677)
Q Consensus 563 ~~~~~~~~~~~~~~~~n~~~a~~~A~~lGi~~~l~~eDi~~~d~k~i~tyls~l~~~~~~~~~ 625 (677)
||+.++.++|++++..|++||+++|||+||..++.||||+++.+|||||+++++|++..++..
T Consensus 558 n~~LV~~G~t~EdK~~NAkYaIS~ARKiGa~IyaLPEDIvEV~pKMvltvfA~lM~~~~~~~~ 620 (627)
T KOG0046|consen 558 NYSLVTSGNTDEEKLLNAKYAISVARKLGASIYALPEDIVEVNPKMVLTVFASLMAWSLQRQS 620 (627)
T ss_pred chhhccCCCChhhhhhcchhhHhHHHhhCceEEeccHHHhhhchhhhHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999988765
No 2
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=100.00 E-value=4.5e-52 Score=430.86 Aligned_cols=576 Identities=31% Similarity=0.487 Sum_probs=478.1
Q ss_pred CCHHHHHH-HHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHH-HHHHHhh
Q 005777 18 FTQVELRT-LKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRA-YLNLQAR 94 (677)
Q Consensus 18 ~t~~e~~~-l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~-~~~l~~~ 94 (677)
++.+++-. ..+.|..+|+ ..|.|....+-.++.+ = ..-+-++..++..+.-.|-+|.++|..|+.. +.++-..
T Consensus 17 w~nekL~s~~~~~~~dL~~Dl~dgv~l~qlLe~~~k---d-~~g~yn~~p~tr~h~~envs~~le~ik~kg~~l~Nigp~ 92 (612)
T COG5069 17 WTNEKLISGGQKEFGDLDTDLKDGVKLAQLLEALQK---D-NAGEYNETPETRIHVMENVSGRLEFIKGKGVKLFNIGPQ 92 (612)
T ss_pred HHhHHHhhcccHHHhhhccccccHHHHHHHHHHhhh---c-cccccCCCHHHHHHHhhccccceeeeccCCceeeeeCcc
Confidence 34455433 5567777888 8888876666666654 1 1234456667777777788999999999882 2232221
Q ss_pred hhhhcCCCCC-CcchhhhhhccccccCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHc
Q 005777 95 AAAKSGGSKN-SSSFLKAATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAV 173 (677)
Q Consensus 95 ~~~~~~~~~~-~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~ 173 (677)
+ ...|..+- -+-.-.-......|++.+++ +|+.++|..|.-+++...|.| ...+.|++...+||..+|+||+.-.
T Consensus 93 d-ivdGn~klilGliw~lisr~tia~inEeg--elt~~~~lllwc~~~t~~y~p-~vd~~df~rswrdGLaf~aLIh~~r 168 (612)
T COG5069 93 D-IVDGNPKLILGLIWSLISRLTIATINEEG--ELTKHINLLLWCDEDTGGYKP-EVDTFDFFRSWRDGLAFSALIHDSR 168 (612)
T ss_pred c-cccCchhhhheeeeeeeehhhhhcccchh--hHHhhhhhheeccccccCcCC-CccHHHHHHHhhhhHHHHHHHhhcC
Confidence 1 22233221 11112223333455577666 999999999999999999999 5678999999999999999999999
Q ss_pred CCCccccccccc---CCCChHHHHHHHHHHHHHHHHcC-ceeeccCCcccccCchHHHHHHHHHHHHHHHhhccccccCc
Q 005777 174 PGTIDERAINTK---RVLNPWERNENHTLCLNSAKAIG-CTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTP 249 (677)
Q Consensus 174 ~~~i~~~~i~~~---~~~~~~~~~eNv~~~L~~~k~~G-~~~~~i~~~di~~g~~~~iL~Liw~li~~~~~~~i~~~~~p 249 (677)
|+++|.+..+.. ++.+.++..+|.+.+++.++..| +.+++++..| + +..+|+ ++|+++++..+..+.+..+
T Consensus 169 PDtld~n~ld~qkknk~~n~~qafe~a~k~Igi~rli~vedivnV~~pD--E-Rsimty-v~~y~~rf~~l~Kid~al~- 243 (612)
T COG5069 169 PDTLDPNVLDLQKKNKALNNFQAFENANKVIGIARLIGVEDIVNVSIPD--E-RSIMTY-VSWYIIRFGLLEKIDIALH- 243 (612)
T ss_pred CcccCccccchhhcccchhHHHHHHHHHHhhchHhhcCcceeeecCCcc--h-HHHHHH-HHHHHHHHhhHHHHHHHHH-
Confidence 999999888732 35678999999999999999988 8999999999 5 778888 9999999999999877666
Q ss_pred ccccccCCCchhhhhhCCCcHHHHHHHHH-HHhhhcCCcccccCCCCCccchHHHHHHHHhhCCCCCCCCCCCCCCHHHH
Q 005777 250 QLVELVDDNNDVEELLGLPPEKVLLKWMN-FHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFDTKDPTER 328 (677)
Q Consensus 250 ~l~~l~~~~e~~~~~~~~s~~~~LL~Wvn-~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~~~~l~~~~~~~~ 328 (677)
++.++.+..++..+ ++.++|..++||.| .|+..+.. .|+||+.+.+||.-+..|++.+. ..|..+++...+...+
T Consensus 244 rv~rllE~~et~~q-lrl~yE~~l~rll~~i~~~q~~w--~v~~f~k~vsd~en~t~ll~ql~-alcsRa~lettdl~sl 319 (612)
T COG5069 244 RVYRLLEADETLIQ-LRLPYEIILLRLLNLIHLKQANW--KVVNFSKDVSDGENYTDLLNQLN-ALCSRAPLETTDLHSL 319 (612)
T ss_pred HHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHhccc--chhhhhhhhhhHHHHHHHHHHHH-HHhhcccchhhhHHHH
Confidence 78888877777666 78999999999999 88877654 49999999999999999999999 7888888888899999
Q ss_pred HHHHHHHHHhCCCccccCccccccCCCcchHHHHHHHHHhhcCCCCCccchhhhhhcchhHHhHHhHHHHHHHHHhhCCC
Q 005777 329 ASKVIEQAEKMDCKRYLTPKDIVEGSPNLNLAFVAHIFQHRNGLSMDSNKISFAEMMTDDAQTSREERCFRLWINSLGTA 408 (677)
Q Consensus 329 ~~~a~~~ae~lgi~~~l~peDi~~~~~~~~l~~va~l~~~~~gl~~~~~~~~~~~~~~~~~~~~~q~~~f~~WiN~~~~~ 408 (677)
+..+.+.|+++.|.+|++| .|+|+..++|++.+|+.+||+.+-. ..-..+....|.+.+.+.++|+-|.|++.++
T Consensus 320 ~gqi~~n~e~y~~RKY~pP----AGnpkldla~~~~lF~t~~~qe~l~-~~~~~eI~e~d~e~efear~~Tf~l~~~~vs 394 (612)
T COG5069 320 AGQILQNAEKYDCRKYLPP----AGNPKLDLAFVAHLFNTHPGQEPLE-EEEKPEIEEFDAEGEFEARVFTFWLNSLDVS 394 (612)
T ss_pred HHHHHHHHHHhhhhccCCC----CCCcccchHHHHhhcCCCcccchhh-hhcccccCCcchhhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999 8999999999999999999965532 2223456667788999999999999999999
Q ss_pred CcchhHHHHhhhHHHHHHHHHHhC-CCccccccccCCC----CCchhHHHHHHHHHHHHHHhhccccccccccccccChh
Q 005777 409 TYVNNVFEDVRNGWVLLEVLDKVS-PGSVSWKQATKPP----IKMPFRKVENCNQVVKIGKELNFSLVNVAGNDIVQGNK 483 (677)
Q Consensus 409 ~~v~dl~~dl~DG~~L~~lle~l~-~~~v~~k~~~~~~----~~~~~~~ieN~~~~l~~~k~~g~~~~~i~~~div~g~~ 483 (677)
+.|.|++-|+|||++|.+.+++.. |.+|+|+.+++.| -.+||++.+|++++++++...|+++++|.+.||.+|.+
T Consensus 395 p~i~~l~gd~Rdql~~lq~l~k~l~p~tv~~~~vk~~~asG~E~~rfka~en~nyavdlG~~~gf~~v~ik~le~~~~~r 474 (612)
T COG5069 395 PEITNLFGDLRDQLILLQALSKKLMPMTVTHKLVKKQPASGIEENRFKAFENENYAVDLGITEGFSLVGIKGLEILDGIR 474 (612)
T ss_pred hhhhhhcccHHHHHHHHHHHHhhcCCceechhhhcccccccchhhhhhhhcccchhhhhhhhcCeeeeeechhhhhhhhH
Confidence 999999999999999999998877 8899999998765 25689999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHHhhhcCCccccccCCCCCCCc-HHHHHHHHhhhCCCce
Q 005777 484 KLILAFLWQLMRFTMLQLLKNLRTHSQGKEITDTDILNWANRKVKKANRTSQIESFKDKNLSN-GIFFLELLSAVEPRVV 562 (677)
Q Consensus 484 kliL~LlW~lir~~~~~~~~~l~~~~~~~~~~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~d-G~al~aLi~~~~P~~i 562 (677)
+.++|.||+||..+.-...-++ .+|..+++.++..|.+...-.|+++-.+..|.|.+-+. |..+..+++-+.|.++
T Consensus 475 -~k~tl~~q~l~~~t~~f~h~lk--k~~~~lsdsd~~a~l~slgl~~dk~egi~~F~~~a~s~~gv~yl~v~~~i~sel~ 551 (612)
T COG5069 475 -LKLTLVWQVLRSNTALFNHVLK--KDGCGLSDSDLCAWLGSLGLKGDKEEGIRSFGDPAGSVSGVFYLDVLKGIHSELV 551 (612)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHh--cCCCCCCHHHHHHHHHHhccccCCccceeeccCCccccccchHHHHHHHHhhhhc
Confidence 9999999999876653322222 24778899999999999999998888899999988988 9999999999999999
Q ss_pred eccccCCCCChHhHHhhHH-HHHH--HHHHcCCCCcCCccccccCCccH-HHHHHHHHHH
Q 005777 563 NWSLVTKGETEEDKKLNAT-YIIS--VARKLGCSIFLLPEDIMEVNQKM-ILILTASIMY 618 (677)
Q Consensus 563 ~~~~~~~~~~~~~~~~n~~-~a~~--~A~~lGi~~~l~~eDi~~~d~k~-i~tyls~l~~ 618 (677)
||+.++.+-+..+...|++ +|++ +||++|.-..+.|+||..+.+.. ++||+.+||.
T Consensus 552 D~d~v~~~~~~f~diad~rsl~is~~ilRs~~aii~~lpe~in~~r~~Ldvltfi~slma 611 (612)
T COG5069 552 DYDLVTRGFTEFDDIADARSLAISSKILRSLGAIIKFLPEDINGVRPRLDVLTFIESLMA 611 (612)
T ss_pred ChhhhhhhHHHHHHhhhhhhhhccHHHHHHhhhHheechhhhcccCccchHHHHHHHHhc
Confidence 9999999877777888888 9999 99999988889999999987766 9999999874
No 3
>KOG0517 consensus Beta-spectrin [Cytoskeleton]
Probab=100.00 E-value=3.7e-53 Score=486.86 Aligned_cols=229 Identities=23% Similarity=0.433 Sum_probs=207.1
Q ss_pred hHHhHHhHHHHHHHHHhhC--CCCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHHHh
Q 005777 388 DAQTSREERCFRLWINSLG--TATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKE 465 (677)
Q Consensus 388 ~~~~~~q~~~f~~WiN~~~--~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~ 465 (677)
|+.+.+|++|||+|||+|+ +++.|.|||+||+||+.|++|+|+|+|+.++ .+++|+||+|++||++.+|+|+|.
T Consensus 43 dERe~vQKKTFTKWvNShL~rv~c~I~DLy~DlrDG~~LlkLLEvlSGE~Lp----kPtrGRMRIH~LENvdKaLqFLke 118 (2473)
T KOG0517|consen 43 DEREAVQKKTFTKWVNSHLARVSCRIGDLYTDLRDGIMLLKLLEVLSGERLP----KPTRGRMRIHCLENVDKALQFLKE 118 (2473)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcchhHHHHHHHhhhHHHHHHHHHHccccCC----CCCCCceeehhHhhhHHHHHHHHh
Confidence 5689999999999999996 5789999999999999999999999999873 223679999999999999999999
Q ss_pred hccccccccccccccChhhhHHHHHHHHH-HHHHHHHhhhcccCCCCCCCCHHHHHHHHHHHhhhcCCccccccCCCCCC
Q 005777 466 LNFSLVNVAGNDIVQGNKKLILAFLWQLM-RFTMLQLLKNLRTHSQGKEITDTDILNWANRKVKKANRTSQIESFKDKNL 544 (677)
Q Consensus 466 ~g~~~~~i~~~div~g~~kliL~LlW~li-r~~~~~~~~~l~~~~~~~~~~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~ 544 (677)
.+|.+.||+++||||||.++||||||+|| ||+|..+.-+-. ....+..++++||.|||.+|++|+ +|+|+||| +||
T Consensus 119 qkVhLEniGshDIVDGN~rL~LGLIWTIILRFQIq~I~ie~e-dn~E~rSAKDALLLWCQmKTAGYp-nVNI~nFT-tSW 195 (2473)
T KOG0517|consen 119 QKVHLENIGSHDIVDGNHRLILGLIWTIILRFQIQDISIETE-DNRETRSAKDALLLWCQMKTAGYP-NVNITNFT-TSW 195 (2473)
T ss_pred cccccccCCcccccCCcchhhHHHHHHHHHheeeeeeEeecc-cchhhhhHHHHHHHHHHhhccCCC-CcccccCc-cch
Confidence 99999999999999999999999999995 999987743211 001223568999999999999999 89999999 999
Q ss_pred CcHHHHHHHHhhhCCCceeccccCCCCChHhHHhhHHHHHHHHH-HcCCCCcCCcccccc--CCccHHHHHHHHHHHHhh
Q 005777 545 SNGIFFLELLSAVEPRVVNWSLVTKGETEEDKKLNATYIISVAR-KLGCSIFLLPEDIME--VNQKMILILTASIMYWSL 621 (677)
Q Consensus 545 ~dG~al~aLi~~~~P~~i~~~~~~~~~~~~~~~~n~~~a~~~A~-~lGi~~~l~~eDi~~--~d~k~i~tyls~l~~~~~ 621 (677)
+||+||.||||++||+++||+.+.+ .++..|++.||++|+ +|||+++|+|||+.. ||+|||||||+.||+||.
T Consensus 196 RdGLaFNALIHkHRPDLvDf~~L~k----~na~~NL~~AFdvAE~~LGia~LLDpEDV~v~~PDEKSIITYV~~YYHyFs 271 (2473)
T KOG0517|consen 196 RDGLAFNALIHKHRPDLVDFDKLKK----SNALYNLQHAFDVAEQELGIAKLLDPEDVNVEQPDEKSIITYVVTYYHYFS 271 (2473)
T ss_pred hcchhHHHHHHhcCcchhhhcccCC----CchhhHHHHHHHHHHHHcCchhcCCHhhcCccCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999998 578999999999998 699999999999984 999999999999999999
Q ss_pred cCCCCC
Q 005777 622 QQQSDE 627 (677)
Q Consensus 622 ~~~~~~ 627 (677)
++..+.
T Consensus 272 KmK~~~ 277 (2473)
T KOG0517|consen 272 KMKQLA 277 (2473)
T ss_pred HHHHHH
Confidence 988766
No 4
>KOG0517 consensus Beta-spectrin [Cytoskeleton]
Probab=100.00 E-value=3.9e-45 Score=420.99 Aligned_cols=243 Identities=23% Similarity=0.375 Sum_probs=217.4
Q ss_pred CCcchhhhhhccccccCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCccccccc
Q 005777 104 NSSSFLKAATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAIN 183 (677)
Q Consensus 104 ~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~ 183 (677)
..+-|-......+.+.....|+++|++|||++|..- ...|.|||+||+||+.|++|+|+|+|+.++.+ +
T Consensus 29 sa~lFErsRIKaLadERe~vQKKTFTKWvNShL~rv---------~c~I~DLy~DlrDG~~LlkLLEvlSGE~LpkP--t 97 (2473)
T KOG0517|consen 29 SARLFERSRIKALADEREAVQKKTFTKWVNSHLARV---------SCRIGDLYTDLRDGIMLLKLLEVLSGERLPKP--T 97 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh---------cchhHHHHHHHhhhHHHHHHHHHHccccCCCC--C
Confidence 334566667777788889999999999999999763 56799999999999999999999999999522 2
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHcCceeeccCCcccccCchHHHHHHHHHHHHHHHhhccccccCcccccccCCCchhhh
Q 005777 184 TKRVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTPQLVELVDDNNDVEE 263 (677)
Q Consensus 184 ~~~~~~~~~~~eNv~~~L~~~k~~G~~~~~i~~~di~~g~~~~iL~Liw~li~~~~~~~i~~~~~p~l~~l~~~~e~~~~ 263 (677)
+..+|+|++||++.+|.|+|...+.+.|||++||||||..+||||||+||.+|+|++|++..- +++
T Consensus 98 --rGRMRIH~LENvdKaLqFLkeqkVhLEniGshDIVDGN~rL~LGLIWTIILRFQIq~I~ie~e--------dn~---- 163 (2473)
T KOG0517|consen 98 --RGRMRIHCLENVDKALQFLKEQKVHLENIGSHDIVDGNHRLILGLIWTIILRFQIQDISIETE--------DNR---- 163 (2473)
T ss_pred --CCceeehhHhhhHHHHHHHHhcccccccCCcccccCCcchhhHHHHHHHHHheeeeeeEeecc--------cch----
Confidence 246899999999999999999999999999999999999999999999999999999977531 111
Q ss_pred hhCCCcHHHHHHHHHHHhhhcCC-cccccCCCCCccchHHHHHHHHhhCCCCCCCCCCCCCCHHHHHHHHHHHHHh-CCC
Q 005777 264 LLGLPPEKVLLKWMNFHLKKAGY-EKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFDTKDPTERASKVIEQAEK-MDC 341 (677)
Q Consensus 264 ~~~~s~~~~LL~Wvn~~l~~~~~-~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~~~~l~~~~~~~~~~~a~~~ae~-lgi 341 (677)
...|++.+||-||+. +.+|| ++.|+||++||+||.+|.||||+++|+++||+.+.+.++.+|++.||++|++ |||
T Consensus 164 -E~rSAKDALLLWCQm--KTAGYpnVNI~nFTtSWRdGLaFNALIHkHRPDLvDf~~L~k~na~~NL~~AFdvAE~~LGi 240 (2473)
T KOG0517|consen 164 -ETRSAKDALLLWCQM--KTAGYPNVNITNFTTSWRDGLAFNALIHKHRPDLVDFDKLKKSNALYNLQHAFDVAEQELGI 240 (2473)
T ss_pred -hhhhHHHHHHHHHHh--hccCCCCcccccCccchhcchhHHHHHHhcCcchhhhcccCCCchhhHHHHHHHHHHHHcCc
Confidence 245899999999998 66799 6999999999999999999999999999999999999999999999999996 999
Q ss_pred ccccCccccccCCCc--chHHHHHHHHHhhcCCCC
Q 005777 342 KRYLTPKDIVEGSPN--LNLAFVAHIFQHRNGLSM 374 (677)
Q Consensus 342 ~~~l~peDi~~~~~~--~~l~~va~l~~~~~gl~~ 374 (677)
+++|+||||....|| ||||||+.+||+|+.+..
T Consensus 241 a~LLDpEDV~v~~PDEKSIITYV~~YYHyFsKmK~ 275 (2473)
T KOG0517|consen 241 AKLLDPEDVNVEQPDEKSIITYVVTYYHYFSKMKQ 275 (2473)
T ss_pred hhcCCHhhcCccCCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999988887 899999999999987654
No 5
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=100.00 E-value=2.9e-34 Score=298.58 Aligned_cols=422 Identities=22% Similarity=0.250 Sum_probs=303.8
Q ss_pred cCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHHH
Q 005777 119 AINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHT 198 (677)
Q Consensus 119 ~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~ 198 (677)
.|...|+++|+.|.|..|-.+. -+.+.+|..|++||+.|..|++++..+.. -.+|.. +.++.|+++|++
T Consensus 5 kwq~vq~ktftkw~nekL~s~~--------~~~~~dL~~Dl~dgv~l~qlLe~~~kd~~--g~yn~~-p~tr~h~~envs 73 (612)
T COG5069 5 KWQKVQKKTFTKWTNEKLISGG--------QKEFGDLDTDLKDGVKLAQLLEALQKDNA--GEYNET-PETRIHVMENVS 73 (612)
T ss_pred HHHHHhhccchHHHhHHHhhcc--------cHHHhhhccccccHHHHHHHHHHhhhccc--cccCCC-HHHHHHHhhccc
Confidence 4888999999999999998853 34689999999999999999999986643 233433 567999999999
Q ss_pred HHHHHHHHcCceeeccCCcccccCchHHHHHHHHHHHHHHHhhccccccCcccccccCCCchhhhhhCCCcHHHHHHHHH
Q 005777 199 LCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTPQLVELVDDNNDVEELLGLPPEKVLLKWMN 278 (677)
Q Consensus 199 ~~L~~~k~~G~~~~~i~~~di~~g~~~~iL~Liw~li~~~~~~~i~~~~~p~l~~l~~~~e~~~~~~~~s~~~~LL~Wvn 278 (677)
..|.+.+..|+++.||+|.||++|++++++||||++|.++.+.+++... .++...-++.||+
T Consensus 74 ~~le~ik~kg~~l~Nigp~divdGn~klilGliw~lisr~tia~inEeg------------------elt~~~~lllwc~ 135 (612)
T COG5069 74 GRLEFIKGKGVKLFNIGPQDIVDGNPKLILGLIWSLISRLTIATINEEG------------------ELTKHINLLLWCD 135 (612)
T ss_pred cceeeeccCCceeeeeCccccccCchhhhheeeeeeeehhhhhcccchh------------------hHHhhhhhheecc
Confidence 9999999999999999999999999999999999999999888775321 1234455899999
Q ss_pred HHhhhcCCcccccCCCCCccchHHHHHHHHhhCCCCCCCCCCC--CCCHHHHHHHHHHHHHh-CCCccccCccccccCC-
Q 005777 279 FHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFD--TKDPTERASKVIEQAEK-MDCKRYLTPKDIVEGS- 354 (677)
Q Consensus 279 ~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~~~~l~--~~~~~~~~~~a~~~ae~-lgi~~~l~peDi~~~~- 354 (677)
.....+..++.+.+|+.+|+||.|||+|||..+|+.+|+..++ .+++..|...||+.|++ +|+++.+..+||++.+
T Consensus 136 ~~t~~y~p~vd~~df~rswrdGLaf~aLIh~~rPDtld~n~ld~qkknk~~n~~qafe~a~k~Igi~rli~vedivnV~~ 215 (612)
T COG5069 136 EDTGGYKPEVDTFDFFRSWRDGLAFSALIHDSRPDTLDPNVLDLQKKNKALNNFQAFENANKVIGIARLIGVEDIVNVSI 215 (612)
T ss_pred ccccCcCCCccHHHHHHHhhhhHHHHHHHhhcCCcccCccccchhhcccchhHHHHHHHHHHhhchHhhcCcceeeecCC
Confidence 8665322246788999999999999999999999999998776 78889999999999998 9999999999999875
Q ss_pred Cc--chHHHHHHHHHhhcCCCCCccchh-hhhhcchhHHhHHh-----HHHHHHHHHh-hC--CCCcchhHHHHhhhHHH
Q 005777 355 PN--LNLAFVAHIFQHRNGLSMDSNKIS-FAEMMTDDAQTSRE-----ERCFRLWINS-LG--TATYVNNVFEDVRNGWV 423 (677)
Q Consensus 355 ~~--~~l~~va~l~~~~~gl~~~~~~~~-~~~~~~~~~~~~~q-----~~~f~~WiN~-~~--~~~~v~dl~~dl~DG~~ 423 (677)
|| ++|+||+.+|..|.-+........ +......+++ ..| +..+.+|.|. ++ ..-.|.++..|.+||-.
T Consensus 216 pDERsimtyv~~y~~rf~~l~Kid~al~rv~rllE~~et-~~qlrl~yE~~l~rll~~i~~~q~~w~v~~f~k~vsd~en 294 (612)
T COG5069 216 PDERSIMTYVSWYIIRFGLLEKIDIALHRVYRLLEADET-LIQLRLPYEIILLRLLNLIHLKQANWKVVNFSKDVSDGEN 294 (612)
T ss_pred cchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHhcccchhhhhhhhhhHHH
Confidence 44 899999999999987765421111 1112222222 233 4567999995 44 23458899999999988
Q ss_pred HHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHHHhhccccccccccccccChhhhHHHHHHHHHHHHH-HHHh
Q 005777 424 LLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSLVNVAGNDIVQGNKKLILAFLWQLMRFTM-LQLL 502 (677)
Q Consensus 424 L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~~~~i~~~div~g~~kliL~LlW~lir~~~-~~~~ 502 (677)
-..+++.+. ... .+.| .....-.+-..++++-++...+.-. .+. .|++++=|++.|.++-.+- ...+
T Consensus 295 ~t~ll~ql~-alc-----sRa~-lettdl~sl~gqi~~n~e~y~~RKY--~pP---AGnpkldla~~~~lF~t~~~qe~l 362 (612)
T COG5069 295 YTDLLNQLN-ALC-----SRAP-LETTDLHSLAGQILQNAEKYDCRKY--LPP---AGNPKLDLAFVAHLFNTHPGQEPL 362 (612)
T ss_pred HHHHHHHHH-HHh-----hccc-chhhhHHHHHHHHHHHHHHhhhhcc--CCC---CCCcccchHHHHhhcCCCcccchh
Confidence 777777665 111 1112 1122333344455666665445422 222 7999999999998852211 1111
Q ss_pred hhcccCCCCCCC------CHHHHHHHHHHHhhhcCCccccccCCCCCCCcHHHHHHHHhhhC-CCceeccccCCCC----
Q 005777 503 KNLRTHSQGKEI------TDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVE-PRVVNWSLVTKGE---- 571 (677)
Q Consensus 503 ~~l~~~~~~~~~------~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aLi~~~~-P~~i~~~~~~~~~---- 571 (677)
.+... .+-++. ....---|.+...-. -.|+||- .+|+||+.+..-+..+- |..+++..+...+
T Consensus 363 ~~~~~-~eI~e~d~e~efear~~Tf~l~~~~vs----p~i~~l~-gd~Rdql~~lq~l~k~l~p~tv~~~~vk~~~asG~ 436 (612)
T COG5069 363 EEEEK-PEIEEFDAEGEFEARVFTFWLNSLDVS----PEITNLF-GDLRDQLILLQALSKKLMPMTVTHKLVKKQPASGI 436 (612)
T ss_pred hhhcc-cccCCcchhhHHHHHHHHHHHHHhcCC----hhhhhhc-ccHHHHHHHHHHHHhhcCCceechhhhcccccccc
Confidence 11000 000111 112346688877544 3589998 69999999998888886 9999998887643
Q ss_pred --ChHhHHhhHHHHHHHHH
Q 005777 572 --TEEDKKLNATYIISVAR 588 (677)
Q Consensus 572 --~~~~~~~n~~~a~~~A~ 588 (677)
+.-...+|..||.+...
T Consensus 437 E~~rfka~en~nyavdlG~ 455 (612)
T COG5069 437 EENRFKAFENENYAVDLGI 455 (612)
T ss_pred hhhhhhhhcccchhhhhhh
Confidence 11234455555555443
No 6
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=99.97 E-value=3.8e-32 Score=306.85 Aligned_cols=459 Identities=19% Similarity=0.204 Sum_probs=308.8
Q ss_pred cchhhhhhccccccCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCccccccccc
Q 005777 106 SSFLKAATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTK 185 (677)
Q Consensus 106 ~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~ 185 (677)
..+..+...-++..|.+.|.++|+.|.|++|.-+. ...+.++.+|+.||+.|..|+++..|.+++ +.++.
T Consensus 10 ~e~~~a~~~~~~~~~e~~q~kTft~W~~s~L~ir~--------~s~ie~~e~D~~n~lk~~~l~ev~~~e~l~--~~~~~ 79 (890)
T KOG0035|consen 10 REEEWAAKFLLTPAWEKVQLKTFTKWCNSKLRIRA--------GSSIEEIEEDFSNGLKLLILLEVISGENLP--PPTRG 79 (890)
T ss_pred hhhHHHHHhhcCccHHHHhccccccccchhhhhcc--------cCccchhhhhhhhhhhhhhhcccccCCccC--CCCCC
Confidence 34555666777888999999999999999999321 346788999999999999999999999995 22333
Q ss_pred CCCChHHHHHHHHHHHHHHHHcCceeeccCCcccccCchHHHHHHHHHHHHHHHhhccccccCcccccccCCCchhhhhh
Q 005777 186 RVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTPQLVELVDDNNDVEELL 265 (677)
Q Consensus 186 ~~~~~~~~~eNv~~~L~~~k~~G~~~~~i~~~di~~g~~~~iL~Liw~li~~~~~~~i~~~~~p~l~~l~~~~e~~~~~~ 265 (677)
.+++|++||++.+|.+.+..|+.+++|++++|++||.+++++++|+||+.+-+.+++...
T Consensus 80 --~~r~hk~En~~~~l~~~~sk~v~~~~iga~eivd~n~~~~l~~i~tlilr~~i~~is~~~------------------ 139 (890)
T KOG0035|consen 80 --KMRVHKLENVNKALVFIESKGVKLVSIGAEEIVDGNLKLTLGLIWTLILRFAIQDISVEC------------------ 139 (890)
T ss_pred --ccchhhhccccceEEEeccccccccccchhhhcCcchhhhhHHHHHhhccccccchhhhc------------------
Confidence 579999999999999999999999999999999999999999999999999887764321
Q ss_pred CCCcHHHHHHHHHHHhhhcCC-cccccCCCCCccchHHHHHHHHhhCCCCCC-CCCCCCCCHHHHHHHHHHHHHh-CCCc
Q 005777 266 GLPPEKVLLKWMNFHLKKAGY-EKQVTNFSSDLKDGEAYAHLLNALAPEHCS-PATFDTKDPTERASKVIEQAEK-MDCK 342 (677)
Q Consensus 266 ~~s~~~~LL~Wvn~~l~~~~~-~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~-~~~l~~~~~~~~~~~a~~~ae~-lgi~ 342 (677)
..++..-||-||+.... +| .+.|.||+++|+||.+||+++|+++|++++ |..++..++.+|++.||++|++ +|||
T Consensus 140 e~~a~egllLwcq~~Ta--~y~~v~v~nF~~sw~~gl~f~A~ih~~Rpdli~~y~~lt~~~~~~n~~~A~~iAek~l~i~ 217 (890)
T KOG0035|consen 140 ELSAKEGLLLWCQRKTA--PYSNVNVQNFHTSWKDGLAFCALIHRHRPDLIDQYDKLTKQDPVENLNLAFDIAEKFLGIP 217 (890)
T ss_pred chhhhhhhhhheecccC--CccccccccceecccchHHHHHHHHhcChhhhhhhhhcCccchhHHhhhhhhhhhhcCCcc
Confidence 23456669999998654 55 578999999999999999999999999999 9999999999999999999998 9999
Q ss_pred cccCccccccC-CCc--chHHHHHHHHHhhcCCCCC-ccc------hhhhhhcchhHHhHHhHH--HHHHHHHhhCC--C
Q 005777 343 RYLTPKDIVEG-SPN--LNLAFVAHIFQHRNGLSMD-SNK------ISFAEMMTDDAQTSREER--CFRLWINSLGT--A 408 (677)
Q Consensus 343 ~~l~peDi~~~-~~~--~~l~~va~l~~~~~gl~~~-~~~------~~~~~~~~~~~~~~~q~~--~f~~WiN~~~~--~ 408 (677)
+.|+++|++.. .|+ .+|||++++|+.|.|...- .++ ..+.+....- -++.+.. ....|+..-.. .
T Consensus 218 r~ld~ed~~~~~~pde~aimtyv~~~~~~fSg~~~~~t~~n~i~s~~av~qe~~~~-~e~~e~~~s~~l~~~~~~~P~l~ 296 (890)
T KOG0035|consen 218 RLLDAEDIVEAAIPDEKAIMTYVSSYYHAFSGAEAAETAANRICSVLAVNQEKETT-MEEYETLASELLEWIARRTPWLQ 296 (890)
T ss_pred cccCccccccCCCCchhhhhhhhhhccccccCcchhhhhcccccchhhccccccch-HHHHHHHhhhhhhHHHhcCcccc
Confidence 99999999988 355 6999999999999986531 100 0111111111 1222222 24677777321 1
Q ss_pred Ccchh--------HHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHH---HHH--hhccccccccc
Q 005777 409 TYVNN--------VFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVK---IGK--ELNFSLVNVAG 475 (677)
Q Consensus 409 ~~v~d--------l~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~---~~k--~~g~~~~~i~~ 475 (677)
..+.+ =..+.+|-+ ++...++|....-+++++..--++ ..+ ..+....+.-+
T Consensus 297 ~r~~~~~~~~~q~~l~~~rd~~---------------~r~~~~e~~v~~~~~~~~~~st~q~k~~~~~~p~~~~s~~~~~ 361 (890)
T KOG0035|consen 297 NRVTDSVGAKAQRKLEFSRDAV---------------YRRLEKEPLVEDKGRLESGFSTLQTKLRLESRPAKLASSGVLV 361 (890)
T ss_pred cccccchhhhhccccccccccc---------------cccccccccccccccccccchhhhhhhhhhcccccCccccccc
Confidence 11111 012222210 111222221111112222110000 000 01111112222
Q ss_pred ccc---ccChhhh-HHHHHHHH---HHHHHHHHhhhcc-----c---CCCCCCC------CHHHHHHHHHHHhhhcCCcc
Q 005777 476 NDI---VQGNKKL-ILAFLWQL---MRFTMLQLLKNLR-----T---HSQGKEI------TDTDILNWANRKVKKANRTS 534 (677)
Q Consensus 476 ~di---v~g~~kl-iL~LlW~l---ir~~~~~~~~~l~-----~---~~~~~~~------~~~~LL~W~~~~~~~~~~~~ 534 (677)
.|+ +.|.... .+.=-|-+ ++..+....-... . ...|++. ....||.||++.+++|. .+
T Consensus 362 S~~~~~~~~le~~~~~~e~~ll~~~~~l~~~~~~~~~f~~~~s~~~~~~pg~e~~l~~~d~~~~lle~~ke~~~~~e-a~ 440 (890)
T KOG0035|consen 362 SDINDAWQGLEQAEKLYEESLLAEIRRLERLEHLASKFSQKASLHESWTPGKEQVLFLNDYGQALLEECKELTKKHE-AF 440 (890)
T ss_pred ccccccccchhhhcccccccchhhhHHHhhhhhhhhhccccCchhhhhccchhhhhhhcchHHHHHHHHHhhccccc-cc
Confidence 333 3333222 11112332 3333333221100 0 0112211 13578999999999997 89
Q ss_pred ccccCCCCCCCcHHHHHHHHhhhCCCceeccccCCCCChHhHHhhHHHHHHHHHHcCCCCcCCcccccc---CCccHHHH
Q 005777 535 QIESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKGETEEDKKLNATYIISVARKLGCSIFLLPEDIME---VNQKMILI 611 (677)
Q Consensus 535 ~i~~f~d~s~~dG~al~aLi~~~~P~~i~~~~~~~~~~~~~~~~n~~~a~~~A~~lGi~~~l~~eDi~~---~d~k~i~t 611 (677)
.++++. +|.+|.+||||+|.|.|..++++.... .+...|+...++.+.- +++..|.++.- +|...+|+
T Consensus 441 ~~~~~~--~~~~~e~~~ai~~~~~~~~~~~~~~~a----~~~q~i~dq~~~~~~l---s~~r~pal~~~~~~~dk~~~~~ 511 (890)
T KOG0035|consen 441 ESDLSA--HQDNVEAFCAIAHELNELLYDDAKLVA----ADCQHICDQWDDLGQL---SRKRRPALMQMEKVLDKLAVLT 511 (890)
T ss_pred ccchhh--hhcchhHHHHHHHHhhhhhhhhhhhhh----hhhhhccccccccchh---hhhhchhhhhhhhhhHHHHHHH
Confidence 999985 899999999999999999998877765 4555566555554432 66666666652 57788899
Q ss_pred HHHHHHHHhhc
Q 005777 612 LTASIMYWSLQ 622 (677)
Q Consensus 612 yls~l~~~~~~ 622 (677)
|.......+..
T Consensus 512 le~a~Raa~~~ 522 (890)
T KOG0035|consen 512 LEFAKRAAPFN 522 (890)
T ss_pred HHHHHHhhhhh
Confidence 98777655554
No 7
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=99.97 E-value=4.9e-32 Score=305.92 Aligned_cols=228 Identities=26% Similarity=0.414 Sum_probs=204.0
Q ss_pred hhhhcchhHHhHHhHHHHHHHHHhhCC---CCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHH
Q 005777 381 FAEMMTDDAQTSREERCFRLWINSLGT---ATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCN 457 (677)
Q Consensus 381 ~~~~~~~~~~~~~q~~~f~~WiN~~~~---~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~ 457 (677)
....+.+-.|+.+|.+||+.|.|+++. ...|.++.+|++||+.|..+++.++|..++ ..+ .+++|+|++||++
T Consensus 15 a~~~~~~~~~e~~q~kTft~W~~s~L~ir~~s~ie~~e~D~~n~lk~~~l~ev~~~e~l~--~~~--~~~~r~hk~En~~ 90 (890)
T KOG0035|consen 15 AAKFLLTPAWEKVQLKTFTKWCNSKLRIRAGSSIEEIEEDFSNGLKLLILLEVISGENLP--PPT--RGKMRVHKLENVN 90 (890)
T ss_pred HHHhhcCccHHHHhccccccccchhhhhcccCccchhhhhhhhhhhhhhhcccccCCccC--CCC--CCccchhhhcccc
Confidence 345556678999999999999999864 578999999999999999999999999874 222 2388999999999
Q ss_pred HHHHHHHhhccccccccccccccChhhhHHHHHHHHH-HHHHHHHhhhcccCCCCCCCCHHHHHHHHHHHhhhcCCcccc
Q 005777 458 QVVKIGKELNFSLVNVAGNDIVQGNKKLILAFLWQLM-RFTMLQLLKNLRTHSQGKEITDTDILNWANRKVKKANRTSQI 536 (677)
Q Consensus 458 ~~l~~~k~~g~~~~~i~~~div~g~~kliL~LlW~li-r~~~~~~~~~l~~~~~~~~~~~~~LL~W~~~~~~~~~~~~~i 536 (677)
.++.|.+..|+.+++|+|++|+|||.+++++++|+++ ||-+.++... ++....+.||.|||++|..|. ++.|
T Consensus 91 ~~l~~~~sk~v~~~~iga~eivd~n~~~~l~~i~tlilr~~i~~is~~------~e~~a~egllLwcq~~Ta~y~-~v~v 163 (890)
T KOG0035|consen 91 KALVFIESKGVKLVSIGAEEIVDGNLKLTLGLIWTLILRFAIQDISVE------CELSAKEGLLLWCQRKTAPYS-NVNV 163 (890)
T ss_pred ceEEEeccccccccccchhhhcCcchhhhhHHHHHhhccccccchhhh------cchhhhhhhhhheecccCCcc-cccc
Confidence 9999999999999999999999999999999999996 7777766532 234456889999999999997 8999
Q ss_pred ccCCCCCCCcHHHHHHHHhhhCCCcee-ccccCCCCChHhHHhhHHHHHHHHHH-cCCCCcCCcccccc---CCccHHHH
Q 005777 537 ESFKDKNLSNGIFFLELLSAVEPRVVN-WSLVTKGETEEDKKLNATYIISVARK-LGCSIFLLPEDIME---VNQKMILI 611 (677)
Q Consensus 537 ~~f~d~s~~dG~al~aLi~~~~P~~i~-~~~~~~~~~~~~~~~n~~~a~~~A~~-lGi~~~l~~eDi~~---~d~k~i~t 611 (677)
.||+ +||+||++|||+||++||++++ |+.+++ .+..+|++.||++|++ +|||+.|+++|++. ||++.|||
T Consensus 164 ~nF~-~sw~~gl~f~A~ih~~Rpdli~~y~~lt~----~~~~~n~~~A~~iAek~l~i~r~ld~ed~~~~~~pde~aimt 238 (890)
T KOG0035|consen 164 QNFH-TSWKDGLAFCALIHRHRPDLIDQYDKLTK----QDPVENLNLAFDIAEKFLGIPRLLDAEDIVEAAIPDEKAIMT 238 (890)
T ss_pred ccce-ecccchHHHHHHHHhcChhhhhhhhhcCc----cchhHHhhhhhhhhhhcCCcccccCccccccCCCCchhhhhh
Confidence 9999 8999999999999999999999 999998 5789999999999996 99999999999996 69999999
Q ss_pred HHHHHHHHhhcCC
Q 005777 612 LTASIMYWSLQQQ 624 (677)
Q Consensus 612 yls~l~~~~~~~~ 624 (677)
|++++|+.|..+.
T Consensus 239 yv~~~~~~fSg~~ 251 (890)
T KOG0035|consen 239 YVSSYYHAFSGAE 251 (890)
T ss_pred hhhhccccccCcc
Confidence 9999999999766
No 8
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=99.96 E-value=2.2e-29 Score=265.34 Aligned_cols=225 Identities=27% Similarity=0.448 Sum_probs=197.9
Q ss_pred cccCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccC--CCChHHHH
Q 005777 117 HHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKR--VLNPWERN 194 (677)
Q Consensus 117 ~~~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~--~~~~~~~~ 194 (677)
.......+.++|+.|+|+ +-++|.++++|+|++||.+|..++++++|+.++++..|+++ ..++++++
T Consensus 382 ~~~~~~reer~fr~WmNS-----------lgv~p~vn~~f~Dl~dglVllq~~dki~pg~Vnwk~vnKp~~~~~~~~kkl 450 (627)
T KOG0046|consen 382 EDEEESREERTFRLWMNS-----------LGVNPYVNNLFEDLRDGLVLLQLYDKVSPGSVNWKHVNKPPSPLKMPFKKV 450 (627)
T ss_pred hhHhHHHHHHHHHHHHHh-----------cCCcHHHHHHHHhhhhhhHHHHHHHHccCCccchhhccCCCCcccccHHHh
Confidence 344566788999999999 33567899999999999999999999999999999999883 34679999
Q ss_pred HHHHHHHHHHHHcCceeeccCCcccccCchHHHHHHHHHHHHHHHhhcc-ccccCcccccccCCCchhhhhhCCCcHHHH
Q 005777 195 ENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADL-NLKKTPQLVELVDDNNDVEELLGLPPEKVL 273 (677)
Q Consensus 195 eNv~~~L~~~k~~G~~~~~i~~~di~~g~~~~iL~Liw~li~~~~~~~i-~~~~~p~l~~l~~~~e~~~~~~~~s~~~~L 273 (677)
||++.+++..++.+..+++|...||++||.+++|+|+|||+|+|.++.+ ++.. .+. ...++.+
T Consensus 451 ENcNyav~lGk~~~FSLVgi~G~DI~dGNk~LtLAlvWQLMR~ytL~vL~~l~~---------~~~-------~~tD~dI 514 (627)
T KOG0046|consen 451 ENCNYAVKLGKQLKFSLVGIAGQDIVDGNKTLTLALVWQLMRRYTLQVLKSLRS---------GGK-------DITDSDI 514 (627)
T ss_pred hcchHHHHHHhhcceeeeccccccccccchHhHHHHHHHHHHHHHHHHHHHHhh---------cCC-------CCcHHHH
Confidence 9999999999999999999999999999999999999999999998765 2221 221 1346679
Q ss_pred HHHHHHHhhhcCCcccccCCCC-CccchHHHHHHHHhhCCCCCCCCCC----CCCCHHHHHHHHHHHHHhCCCccccCcc
Q 005777 274 LKWMNFHLKKAGYEKQVTNFSS-DLKDGEAYAHLLNALAPEHCSPATF----DTKDPTERASKVIEQAEKMDCKRYLTPK 348 (677)
Q Consensus 274 L~Wvn~~l~~~~~~~~V~nFs~-d~~DG~al~~Ll~~~~P~~~~~~~l----~~~~~~~~~~~a~~~ae~lgi~~~l~pe 348 (677)
+.|+|..++..|....|.+|.+ +.+||.++..||+.+.|+.++|+-+ +..++..|+++|+.+|+++|+..++-||
T Consensus 515 v~WaN~klk~~Gk~s~IrSFkD~siS~g~~vLDLidaI~P~~Vn~~LV~~G~t~EdK~~NAkYaIS~ARKiGa~IyaLPE 594 (627)
T KOG0046|consen 515 VNWANRKLKKAGKKSQIRSFKDKSISDGLFVLDLLDAIKPGVVNYSLVTSGNTDEEKLLNAKYAISVARKLGASIYALPE 594 (627)
T ss_pred HHHHHHHHHhcCCccccccccCcccccCcchHHHHhhcCcCccchhhccCCCChhhhhhcchhhHhHHHhhCceEEeccH
Confidence 9999999999998889999985 8999999999999999999998654 4567888999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHh
Q 005777 349 DIVEGSPNLNLAFVAHIFQH 368 (677)
Q Consensus 349 Di~~~~~~~~l~~va~l~~~ 368 (677)
||++.+|+++|++.|+|+..
T Consensus 595 DIvEV~pKMvltvfA~lM~~ 614 (627)
T KOG0046|consen 595 DIVEVNPKMVLTVFASLMAW 614 (627)
T ss_pred HHhhhchhhhHHHHHHHHHh
Confidence 99999999999999999863
No 9
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.65 E-value=6.1e-16 Score=136.69 Aligned_cols=101 Identities=35% Similarity=0.583 Sum_probs=89.9
Q ss_pred HHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHHHHHHHHH
Q 005777 125 KASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSA 204 (677)
Q Consensus 125 ~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~ 204 (677)
++++++|+|.+++..+ ...+.|+.++++||++||+|+|.+.|+.++.+.+. ++.+++++++|++.++++|
T Consensus 2 ~~~l~~Win~~l~~~~--------~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~--~~~~~~~~~~Ni~~~l~~~ 71 (103)
T smart00033 2 EKTLLRWVNSLLAEYG--------KPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVN--ASLSRFKKIENINLALSFA 71 (103)
T ss_pred hHHHHHHHHHHcccCC--------CCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhcc--ccccHHHHHHhHHHHHHHH
Confidence 5789999999999862 34579999999999999999999999999765544 2456899999999999999
Q ss_pred HHcCceeeccCCcccccCchHHHHHHHHHHHH
Q 005777 205 KAIGCTVVNIGTQDLVEGRPHLLLGLISQIIK 236 (677)
Q Consensus 205 k~~G~~~~~i~~~di~~g~~~~iL~Liw~li~ 236 (677)
+..|+..+.|.++||++|+ +.+++++|+|+.
T Consensus 72 ~~~g~~~~~~~~~Dl~~~~-k~~~~v~~~l~~ 102 (103)
T smart00033 72 EKLGGKLVLFEPEDLVEGN-KLILGVIWTLIL 102 (103)
T ss_pred HHcCCeeeccCHHHHhhcc-hHHHHHHHHHHh
Confidence 9999888999999999999 999999999975
No 10
>KOG3631 consensus Alpha-parvin and related focal adhesion proteins [Cytoskeleton]
Probab=99.64 E-value=2.4e-15 Score=147.38 Aligned_cols=236 Identities=17% Similarity=0.212 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHHHHHH
Q 005777 122 ESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCL 201 (677)
Q Consensus 122 ~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L 201 (677)
++-.+.++.|||..|..... .+.+|.+|+.||.+|-+|+|+|.+-++....+.+. .....|+++-+-.+.
T Consensus 89 ~el~kvLi~WiN~~L~~erI---------vVr~LeEDlfDGqilqkL~ekL~~~klev~evtqs-e~~QkqKLq~Vleav 158 (365)
T KOG3631|consen 89 EELVKVLIDWINDVLVPERI---------VVRSLEEDLFDGQILQKLFEKLAALKLEVAEVTQS-EIGQKQKLQTVLEAV 158 (365)
T ss_pred HHHHHHHHHHHHHhhcchhh---------hHHhhHHhhhhhHHHHHHHHHHHhhhccchhhhhh-hHHHHHHHHHHHHHH
Confidence 34556899999999988642 47999999999999999999999988877776655 334566766666655
Q ss_pred HHHHH-cCceeeccCCcccccCchHHHHHHHHHHHHHHHhhccccccCccc--c-----------------------ccc
Q 005777 202 NSAKA-IGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTPQL--V-----------------------ELV 255 (677)
Q Consensus 202 ~~~k~-~G~~~~~i~~~di~~g~~~~iL~Liw~li~~~~~~~i~~~~~p~l--~-----------------------~l~ 255 (677)
+-.-. -+.. ..++++-|...+.-+||.|+-.+.+||.. .+.+..+=.. + .+.
T Consensus 159 nr~L~~~~~q-~kWsvdsIh~Kdl~ailhLLVaLa~~fra-pirlPdnV~v~Vvvvqk~~g~lks~~i~EqlT~~tt~l~ 236 (365)
T KOG3631|consen 159 NRSLQLPEWQ-AKWSVDSIHNKDLVAILHLLVALAKHFRA-PIRLPDNVQVQVVVVQKREGGLKSEKIVEQLTTYTTDLD 236 (365)
T ss_pred HHHhcCchhh-hccchhhhccchHHHHHHHHHHHHHHcCC-CccCCCceEEEEEEEEeccccchHHHHHHHHhhhhHhhc
Confidence 43332 2222 24788889999999999999999999975 1211110000 0 000
Q ss_pred --CCCchhhhhhCCCcHH------HHHHHHHHHhhhcCCcccccCCCCCccchHHHHHHHHhhCCCCCC-----CCCCCC
Q 005777 256 --DDNNDVEELLGLPPEK------VLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCS-----PATFDT 322 (677)
Q Consensus 256 --~~~e~~~~~~~~s~~~------~LL~Wvn~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~-----~~~l~~ 322 (677)
.....++++++..|++ .|+.+||.||.+-+ ..|+++.+.|+||..+.-|+..+..-.++ ..+-+.
T Consensus 237 ~~~~rDaFDtLFd~aPdKln~VK~sli~FvNkhLnkln--LeVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~ 314 (365)
T KOG3631|consen 237 GRPERDAFDTLFDHAPDKLNVVKKSLITFVNKHLNKLN--LEVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSF 314 (365)
T ss_pred CCCchhhHHHHHhhCcHHHHHHHHHHHHHHHHHhhhcc--ceeehhhhhhccchHHHHHHHhhccceeecceeecCCCCH
Confidence 0112345667777655 49999999998655 57999999999999999888887776553 344455
Q ss_pred CCHHHHHHHHHHHHHhCCC-ccccCccccccCCCcchHHHHHHHHHhhcC
Q 005777 323 KDPTERASKVIEQAEKMDC-KRYLTPKDIVEGSPNLNLAFVAHIFQHRNG 371 (677)
Q Consensus 323 ~~~~~~~~~a~~~ae~lgi-~~~l~peDi~~~~~~~~l~~va~l~~~~~g 371 (677)
.....|...||+.+++=|+ .+-..|+||++++.++.+..+..||..|..
T Consensus 315 eekv~NVsfAfeLm~D~GL~kp~~rpeDIvN~D~KSTLRvLy~LFtKyk~ 364 (365)
T KOG3631|consen 315 EEKVHNVSFAFELMKDGGLEKPKVRPEDIVNKDLKSTLRVLYNLFTKYKN 364 (365)
T ss_pred HHHHHHHHHHHHHHHccCcCCCCCChHHhhcccHHHHHHHHHHHHHhhcc
Confidence 6788899999999998776 346899999999999999999999987753
No 11
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.62 E-value=1.2e-15 Score=135.87 Aligned_cols=104 Identities=40% Similarity=0.619 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHHHHHHHH
Q 005777 124 EKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNS 203 (677)
Q Consensus 124 q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~ 203 (677)
+++++++|||.+++..+ + ..+.|+.++|+||++||+|+|.+.|+.++....+ +.+++++++|++.+|++
T Consensus 2 ~~~~l~~Win~~l~~~~------~--~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~---~~~~~~~~~Ni~~~l~~ 70 (107)
T cd00014 2 QKEELLRWINKVLGEYG------P--VTINNFSTDLKDGIALCKLLNSLSPDLIDKKKIN---PLSRFKRLENINLALNF 70 (107)
T ss_pred hHHHHHHHHHHHhccCC------C--ccHHHHHHHHhchHHHHHHHHHHCcccccccccc---ccchhhHHHHHHHHHHH
Confidence 57899999999999873 1 3589999999999999999999999998654332 45789999999999999
Q ss_pred HHHcCceeeccCCcccc-cCchHHHHHHHHHHHHHH
Q 005777 204 AKAIGCTVVNIGTQDLV-EGRPHLLLGLISQIIKIQ 238 (677)
Q Consensus 204 ~k~~G~~~~~i~~~di~-~g~~~~iL~Liw~li~~~ 238 (677)
|+..|++...+.++||+ +||.+.|++++|+|+++|
T Consensus 71 ~~~~gi~~~~~~~~Dl~~~~n~~~vl~~l~~l~~~~ 106 (107)
T cd00014 71 AEKLGVPVVNFDAEDLVEDGDEKLVLGLLWSLIRKF 106 (107)
T ss_pred HHHcCCceeccCHHHHhhCCCceeeHHHHHHHHHhh
Confidence 99999987789999999 999999999999999987
No 12
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.62 E-value=2e-15 Score=134.69 Aligned_cols=105 Identities=21% Similarity=0.442 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHhhhcCCccccccCCCCCCCcHHHHHHHHhhhCCCceeccccCCC-CChHhHHhhHHHHHHHHHH-cCCC
Q 005777 516 DTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKG-ETEEDKKLNATYIISVARK-LGCS 593 (677)
Q Consensus 516 ~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aLi~~~~P~~i~~~~~~~~-~~~~~~~~n~~~a~~~A~~-lGi~ 593 (677)
++.|++|||.++..++....|+||. ++|+||++||+||+++.|+.+++..+.+. .+.....+|++.++++|++ +|+|
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~-~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~ 79 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFS-EDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIP 79 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTS-GGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CHHHHHHHHHHcccccCCCCcCcHH-HHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCC
Confidence 4689999999999984458899998 79999999999999999999999988431 1556889999999999987 9999
Q ss_pred CcCCccccc-cCCccHHHHHHHHHHHHhh
Q 005777 594 IFLLPEDIM-EVNQKMILILTASIMYWSL 621 (677)
Q Consensus 594 ~~l~~eDi~-~~d~k~i~tyls~l~~~~~ 621 (677)
..++++|+. .+|.+.|+.|+++||++|.
T Consensus 80 ~~~~~~dl~~~~~~~~vl~~l~~l~~~~e 108 (108)
T PF00307_consen 80 PLLSPEDLVEKGDEKSVLSFLWQLFRYFE 108 (108)
T ss_dssp CTS-HHHHHSTT-HHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHCcCHHHHHHHHHHHHHHHC
Confidence 999999999 8999999999999999984
No 13
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.61 E-value=1.3e-15 Score=134.50 Aligned_cols=98 Identities=36% Similarity=0.573 Sum_probs=87.9
Q ss_pred HHHHHHHHHhhCC---CCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHHHhhccccc
Q 005777 395 ERCFRLWINSLGT---ATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSLV 471 (677)
Q Consensus 395 ~~~f~~WiN~~~~---~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~~~ 471 (677)
++.+++|+|++.. ...|+|+.++|+||++||+|++.+.|+.++.+.+.+| ..++++++|++.+++++++.|+..+
T Consensus 2 ~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~~~--~~~~~~~~Ni~~~l~~~~~~g~~~~ 79 (103)
T smart00033 2 EKTLLRWVNSLLAEYGKPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVNAS--LSRFKKIENINLALSFAEKLGGKLV 79 (103)
T ss_pred hHHHHHHHHHHcccCCCCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhcccc--ccHHHHHHhHHHHHHHHHHcCCeee
Confidence 5789999999865 3578999999999999999999999999976655433 6789999999999999999998889
Q ss_pred cccccccccChhhhHHHHHHHHHH
Q 005777 472 NVAGNDIVQGNKKLILAFLWQLMR 495 (677)
Q Consensus 472 ~i~~~div~g~~kliL~LlW~lir 495 (677)
.+.++||++|+ +.+++++|+|++
T Consensus 80 ~~~~~Dl~~~~-k~~~~v~~~l~~ 102 (103)
T smart00033 80 LFEPEDLVEGN-KLILGVIWTLIL 102 (103)
T ss_pred ccCHHHHhhcc-hHHHHHHHHHHh
Confidence 99999999999 999999999975
No 14
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.58 E-value=5e-15 Score=131.91 Aligned_cols=101 Identities=30% Similarity=0.571 Sum_probs=89.3
Q ss_pred hHHHHHHHHHhhCCCC---cchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHHHhhcccc
Q 005777 394 EERCFRLWINSLGTAT---YVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSL 470 (677)
Q Consensus 394 q~~~f~~WiN~~~~~~---~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~~ 470 (677)
|++.+++|||.+.... .++|+.++|+||++||+|++.+.|+.++++... | ..++++++|++.+++++++.|++.
T Consensus 2 ~~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~-~--~~~~~~~~Ni~~~l~~~~~~gi~~ 78 (107)
T cd00014 2 QKEELLRWINKVLGEYGPVTINNFSTDLKDGIALCKLLNSLSPDLIDKKKIN-P--LSRFKRLENINLALNFAEKLGVPV 78 (107)
T ss_pred hHHHHHHHHHHHhccCCCccHHHHHHHHhchHHHHHHHHHHCcccccccccc-c--cchhhHHHHHHHHHHHHHHcCCce
Confidence 6789999999986432 599999999999999999999999998654432 2 678999999999999999999987
Q ss_pred ccccccccc-cChhhhHHHHHHHHHHHH
Q 005777 471 VNVAGNDIV-QGNKKLILAFLWQLMRFT 497 (677)
Q Consensus 471 ~~i~~~div-~g~~kliL~LlW~lir~~ 497 (677)
..+.++||+ +||.+.+++++|+|++++
T Consensus 79 ~~~~~~Dl~~~~n~~~vl~~l~~l~~~~ 106 (107)
T cd00014 79 VNFDAEDLVEDGDEKLVLGLLWSLIRKF 106 (107)
T ss_pred eccCHHHHhhCCCceeeHHHHHHHHHhh
Confidence 789999999 999999999999998764
No 15
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.57 E-value=4.6e-15 Score=132.29 Aligned_cols=101 Identities=38% Similarity=0.601 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhhhcCCcccccCCCCCccchHHHHHHHHhhCCCCCCCCCCCCC-----CHHHHHHHHHHHHHh-CCCcc
Q 005777 270 EKVLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFDTK-----DPTERASKVIEQAEK-MDCKR 343 (677)
Q Consensus 270 ~~~LL~Wvn~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~~~~l~~~-----~~~~~~~~a~~~ae~-lgi~~ 343 (677)
|+.|++|+|.++...+...+|+||.++|+||.+||.|++.+.|..+++..+.+. +..+|++.+++++++ +|+|.
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~~ 80 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFSEDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIPP 80 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTSGGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcccccCCCCcCcHHHHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999865445689999999999999999999999999988777433 689999999999998 99999
Q ss_pred ccCccccc-cCCCcchHHHHHHHHHhhc
Q 005777 344 YLTPKDIV-EGSPNLNLAFVAHIFQHRN 370 (677)
Q Consensus 344 ~l~peDi~-~~~~~~~l~~va~l~~~~~ 370 (677)
.++|+||. .++.+.++.|+++||++|.
T Consensus 81 ~~~~~dl~~~~~~~~vl~~l~~l~~~~e 108 (108)
T PF00307_consen 81 LLSPEDLVEKGDEKSVLSFLWQLFRYFE 108 (108)
T ss_dssp TS-HHHHHSTT-HHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHCcCHHHHHHHHHHHHHHHC
Confidence 99999999 7778899999999999874
No 16
>KOG3631 consensus Alpha-parvin and related focal adhesion proteins [Cytoskeleton]
Probab=99.54 E-value=7.3e-14 Score=137.02 Aligned_cols=222 Identities=18% Similarity=0.216 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHhhhcCCcccccCCCCCccchHHHHHHHHhhCCCCCCCCCCC--CCCHHHHHHHHHHHHHh-CCCcccc-
Q 005777 270 EKVLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFD--TKDPTERASKVIEQAEK-MDCKRYL- 345 (677)
Q Consensus 270 ~~~LL~Wvn~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~~~~l~--~~~~~~~~~~a~~~ae~-lgi~~~l- 345 (677)
-++|+.|+|..|. +....|..+..|..||.++..|+.++..-.+.....+ .....+.++.+++.+.+ |+.|..-
T Consensus 92 ~kvLi~WiN~~L~--~erIvVr~LeEDlfDGqilqkL~ekL~~~klev~evtqse~~QkqKLq~Vleavnr~L~~~~~q~ 169 (365)
T KOG3631|consen 92 VKVLIDWINDVLV--PERIVVRSLEEDLFDGQILQKLFEKLAALKLEVAEVTQSEIGQKQKLQTVLEAVNRSLQLPEWQA 169 (365)
T ss_pred HHHHHHHHHHhhc--chhhhHHhhHHhhhhhHHHHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHHhcCchhhh
Confidence 4679999999885 3335789999999999999999999999887665444 44566778889999997 9998854
Q ss_pred --CccccccCCCcchHHHHHHHHHhh-cCCCC------------------------------------Cccchhhhhhcc
Q 005777 346 --TPKDIVEGSPNLNLAFVAHIFQHR-NGLSM------------------------------------DSNKISFAEMMT 386 (677)
Q Consensus 346 --~peDi~~~~~~~~l~~va~l~~~~-~gl~~------------------------------------~~~~~~~~~~~~ 386 (677)
+++-|.+.+--.++-++..|-.+| +.+.- ...+..|..+++
T Consensus 170 kWsvdsIh~Kdl~ailhLLVaLa~~frapirlPdnV~v~Vvvvqk~~g~lks~~i~EqlT~~tt~l~~~~~rDaFDtLFd 249 (365)
T KOG3631|consen 170 KWSVDSIHNKDLVAILHLLVALAKHFRAPIRLPDNVQVQVVVVQKREGGLKSEKIVEQLTTYTTDLDGRPERDAFDTLFD 249 (365)
T ss_pred ccchhhhccchHHHHHHHHHHHHHHcCCCccCCCceEEEEEEEEeccccchHHHHHHHHhhhhHhhcCCCchhhHHHHHh
Confidence 344444443334544444444443 33211 112233444444
Q ss_pred hhH-HhHHhHHHHHHHHHhhC--CCCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHH
Q 005777 387 DDA-QTSREERCFRLWINSLG--TATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIG 463 (677)
Q Consensus 387 ~~~-~~~~q~~~f~~WiN~~~--~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~ 463 (677)
+.. .....++++..++|.|+ .+..|.+|-+.|.||++|+-|+..|.|-.++.+++.-.| .+.-+|++|+..|++.+
T Consensus 250 ~aPdKln~VK~sli~FvNkhLnklnLeVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp-~S~eekv~NVsfAfeLm 328 (365)
T KOG3631|consen 250 HAPDKLNVVKKSLITFVNKHLNKLNLEVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTP-NSFEEKVHNVSFAFELM 328 (365)
T ss_pred hCcHHHHHHHHHHHHHHHHHhhhccceeehhhhhhccchHHHHHHHhhccceeecceeecCC-CCHHHHHHHHHHHHHHH
Confidence 332 35666888999999986 467899999999999999999999999999888887776 67889999999999999
Q ss_pred HhhccccccccccccccChhhhHHHHHHHHH
Q 005777 464 KELNFSLVNVAGNDIVQGNKKLILAFLWQLM 494 (677)
Q Consensus 464 k~~g~~~~~i~~~div~g~~kliL~LlW~li 494 (677)
++-|..-+..+++|||+++.|-+|.+++.|+
T Consensus 329 ~D~GL~kp~~rpeDIvN~D~KSTLRvLy~LF 359 (365)
T KOG3631|consen 329 KDGGLEKPKVRPEDIVNKDLKSTLRVLYNLF 359 (365)
T ss_pred HccCcCCCCCChHHhhcccHHHHHHHHHHHH
Confidence 9999988889999999999999999999886
No 17
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.26 E-value=5.6e-12 Score=118.47 Aligned_cols=114 Identities=20% Similarity=0.213 Sum_probs=101.1
Q ss_pred hhccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 14 LQSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 14 ~~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
..++||++|+++++++|..||+ ++|.|+..||..+|+. +|..+|+.++.+|+.+++. +.+.|+|.+|+.+|....
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~---lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~ 85 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRS---LGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKL 85 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHH---cCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHh
Confidence 3568999999999999999999 9999999999999999 9999999999999999999 899999999999998776
Q ss_pred hhhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHHHHHhhhCCC
Q 005777 93 ARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAHINSFLGED 139 (677)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~~ 139 (677)
.+....+...++|+.|++++++. ++..+.+..+. -|+++
T Consensus 86 ~~~~~~Eel~~aF~~fD~d~dG~----Is~~eL~~vl~----~lge~ 124 (160)
T COG5126 86 KRGDKEEELREAFKLFDKDHDGY----ISIGELRRVLK----SLGER 124 (160)
T ss_pred ccCCcHHHHHHHHHHhCCCCCce----ecHHHHHHHHH----hhccc
Confidence 66666666778999999999999 88877776555 55554
No 18
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.18 E-value=4.4e-11 Score=113.63 Aligned_cols=108 Identities=18% Similarity=0.290 Sum_probs=94.7
Q ss_pred CCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhhhh
Q 005777 18 FTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQARAA 96 (677)
Q Consensus 18 ~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~~~ 96 (677)
++..+..+++++|+.||+ ++|+|+..+|..+|+. +|..+|++++..++.++|.|++|.|+|++|+.+|........
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~---lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~ 78 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRS---LGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKT 78 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHH---cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccc
Confidence 578889999999999999 9999999999999999 999999999999999999999999999999999987655444
Q ss_pred hhc----CCCCCCcchhhhhhccccccCCHHHHHHHHHHH
Q 005777 97 AKS----GGSKNSSSFLKAATTTVHHAINESEKASYVAHI 132 (677)
Q Consensus 97 ~~~----~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wI 132 (677)
... ....+|+.|++.+.|. ++..+.+.++.-.
T Consensus 79 ~~~~~~~el~eaF~~fD~d~~G~----Is~~el~~~l~~l 114 (151)
T KOG0027|consen 79 DEEASSEELKEAFRVFDKDGDGF----ISASELKKVLTSL 114 (151)
T ss_pred cccccHHHHHHHHHHHccCCCCc----CcHHHHHHHHHHh
Confidence 332 4467899999999988 8888888776633
No 19
>KOG2046 consensus Calponin [Cytoskeleton]
Probab=99.13 E-value=1.8e-10 Score=109.94 Aligned_cols=106 Identities=28% Similarity=0.459 Sum_probs=86.8
Q ss_pred cchhhhhhccccccCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCccccccccc
Q 005777 106 SSFLKAATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTK 185 (677)
Q Consensus 106 ~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~ 185 (677)
.+.+.+.-.+...++..++....+.||...+... + +.-.||.+.|+||++||+|+|+|.|+.. +++| +
T Consensus 8 ~gl~~~v~~k~~~k~~~~~~~el~~WI~~~~~~~------~---~~~~~f~~~LKDG~iLCkl~N~l~p~~~--~~~~-~ 75 (193)
T KOG2046|consen 8 YGLSREVQQKIESKYDDELEKELREWIENVVLTE------L---PARGDFQDLLKDGVILCKLINKLYPGVV--KKIN-E 75 (193)
T ss_pred cchHHHHHHHhhcccCHHHHHHHHHHHHHhhccC------C---CcccCHHHHHcchHHHHHHHHHhCcCcc--cccc-c
Confidence 3455566667778899999999999999974443 1 1247899999999999999999999544 4444 3
Q ss_pred CCCChHHHHHHHHHHHHHHHHcCceeec-cCCcccccCch
Q 005777 186 RVLNPWERNENHTLCLNSAKAIGCTVVN-IGTQDLVEGRP 224 (677)
Q Consensus 186 ~~~~~~~~~eNv~~~L~~~k~~G~~~~~-i~~~di~~g~~ 224 (677)
+.+.|.++||++.++++++.+|++-++ +.+.|++++..
T Consensus 76 -s~~~f~qmEnIs~Fi~a~~~ygv~~~d~FqtvDLfE~kd 114 (193)
T KOG2046|consen 76 -SKMAFVQMENISNFIKAAKKYGVPEVDLFQTVDLFEGKD 114 (193)
T ss_pred -ccccHHHHHHHHHHHHHHHhcCCChhhcccccccccCCC
Confidence 467999999999999999999999888 78999999864
No 20
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.12 E-value=8.8e-11 Score=107.09 Aligned_cols=103 Identities=17% Similarity=0.279 Sum_probs=90.4
Q ss_pred hhccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 14 LQSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 14 ~~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
+.+.|+|.|+.++++||..+|. ++|.|+.+||+.++.+ +|..+++++|++||+++ .|.|+|.-|+.++-..-
T Consensus 22 vFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aS---lGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL 94 (171)
T KOG0031|consen 22 VFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLAS---LGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKL 94 (171)
T ss_pred HHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHH---cCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHh
Confidence 3457899999999999999999 9999999999999999 99999999999999996 57899999999998777
Q ss_pred hhhhhhcCCCCCCcchhhhhhccccccCCHHHHHH
Q 005777 93 ARAAAKSGGSKNSSSFLKAATTTVHHAINESEKAS 127 (677)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~ 127 (677)
.+..++.....+|+.|+..+.++ +.+...++
T Consensus 95 ~gtdpe~~I~~AF~~FD~~~~G~----I~~d~lre 125 (171)
T KOG0031|consen 95 NGTDPEEVILNAFKTFDDEGSGK----IDEDYLRE 125 (171)
T ss_pred cCCCHHHHHHHHHHhcCccCCCc----cCHHHHHH
Confidence 77777777778889999998888 55544444
No 21
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.00 E-value=6.6e-10 Score=102.23 Aligned_cols=115 Identities=17% Similarity=0.207 Sum_probs=99.5
Q ss_pred hccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHh
Q 005777 15 QSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 15 ~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~ 93 (677)
-+.+++++.++++++|..||. ++|+|+++||+-+|++ +|..+..+||..|+.++|.++.|.|+|++|+++|...-.
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmra---lGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~ 100 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRA---LGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLG 100 (172)
T ss_pred CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHH---cCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHh
Confidence 457889999999999999999 9999999999999999 999999999999999999999999999999999976655
Q ss_pred hhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHHHHHhhh
Q 005777 94 RAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAHINSFL 136 (677)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L 136 (677)
....+....+.|+-|+.+.+|. ++....+....-++..|
T Consensus 101 e~dt~eEi~~afrl~D~D~~Gk----is~~~lkrvakeLgenl 139 (172)
T KOG0028|consen 101 ERDTKEEIKKAFRLFDDDKTGK----ISQRNLKRVAKELGENL 139 (172)
T ss_pred ccCcHHHHHHHHHcccccCCCC----cCHHHHHHHHHHhCccc
Confidence 5447777778888888888888 88777777665444433
No 22
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.00 E-value=9.2e-10 Score=98.92 Aligned_cols=116 Identities=16% Similarity=0.279 Sum_probs=94.7
Q ss_pred cCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCC--CCCcccHHHHHHHHHHHHh
Q 005777 17 QFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTN--MEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d--~~g~I~f~eF~~~~~~l~~ 93 (677)
.++.+++.+++++|..||+ ++|+|+..++..+|++ +|.++|+.++.+.+.+.+.+ +-..++||+|+.+|..+..
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRa---lG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vak 80 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRA---LGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAK 80 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHHHH---hcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHh
Confidence 3577888999999999999 9999999999999999 99999999999999998877 4578999999999988855
Q ss_pred hhhhhc--CCCCCCcchhhhhhccccccCCHHHHHHHHHHHHhhhCCC
Q 005777 94 RAAAKS--GGSKNSSSFLKAATTTVHHAINESEKASYVAHINSFLGED 139 (677)
Q Consensus 94 ~~~~~~--~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~~ 139 (677)
.....+ .-....+.|+++++++ +.-.|.+..+.-.-..|.+.
T Consensus 81 nk~q~t~edfvegLrvFDkeg~G~----i~~aeLRhvLttlGekl~ee 124 (152)
T KOG0030|consen 81 NKDQGTYEDFVEGLRVFDKEGNGT----IMGAELRHVLTTLGEKLTEE 124 (152)
T ss_pred ccccCcHHHHHHHHHhhcccCCcc----eeHHHHHHHHHHHHhhccHH
Confidence 421111 0034668899999988 88888887777666666543
No 23
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.97 E-value=1.6e-09 Score=92.89 Aligned_cols=70 Identities=17% Similarity=0.336 Sum_probs=63.5
Q ss_pred HHHHHHHHHhhhhcC--CCCceehhhHHHHHHhhhhcCCCCcH-HHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 21 VELRTLKSKFISTRS--QSGRVTVGDLPPLFAKLKAFSEMFKE-DEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 21 ~e~~~l~~~F~~~D~--~~G~I~~~eL~~~l~~~~~lg~~~t~-~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
.-+..|+++|+.||+ ++|+|+.+||+.+|++- +|..+++ +++++||+.+|.|+||.|+|+||+++|..+-
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~e--lg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQ--LPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH--hhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 347789999999998 89999999999999872 5888888 9999999999999999999999999998763
No 24
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.94 E-value=1.6e-09 Score=101.96 Aligned_cols=65 Identities=17% Similarity=0.437 Sum_probs=62.1
Q ss_pred HHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 23 LRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 23 ~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
.++|+.||+.||+ ++|+|+..+|+.+++. +|+.++++|++.|+++++.|++|.|+|++|.+++..
T Consensus 91 ~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~---lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 91 EEELREAFKLFDKDHDGYISIGELRRVLKS---LGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred HHHHHHHHHHhCCCCCceecHHHHHHHHHh---hcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 5689999999999 9999999999999999 999999999999999999999999999999998754
No 25
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.94 E-value=4e-09 Score=92.21 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=67.8
Q ss_pred cCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhhh
Q 005777 17 QFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQARA 95 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~~ 95 (677)
++|++++..++++|..||+ ++|+|+.+|++.+|+. .| ++++++++|++.+|.+.+|.|+|+||+.++..+....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~---~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 77 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK---SG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKL 77 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH---cC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHH
Confidence 5789999999999999999 9999999999999998 76 7889999999999999999999999999998765543
No 26
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.93 E-value=4.1e-09 Score=90.36 Aligned_cols=69 Identities=13% Similarity=0.286 Sum_probs=62.4
Q ss_pred HHHHHHHHhhhhc-C-CCC-ceehhhHHHHHHh----hhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 22 ELRTLKSKFISTR-S-QSG-RVTVGDLPPLFAK----LKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 22 e~~~l~~~F~~~D-~-~~G-~I~~~eL~~~l~~----~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
-+..|+++|+.|| + ++| +|+.+||+.+|++ + +|..+++++++++++++|.|++|.|+|+||+.++..+-
T Consensus 6 ~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~--lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 6 AMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHF--LEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHH--hcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 3678999999998 7 999 6999999999986 3 58889999999999999999999999999999987653
No 27
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.89 E-value=3e-09 Score=101.08 Aligned_cols=66 Identities=18% Similarity=0.383 Sum_probs=62.6
Q ss_pred HHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 22 ELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 22 e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
..+++++||+.||+ ++|+||..||+.+|.. +|.+.+.+++.+|++++|.|+||.|+|++|+.+|..
T Consensus 83 ~~~el~eaF~~fD~d~~G~Is~~el~~~l~~---lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 83 SSEELKEAFRVFDKDGDGFISASELKKVLTS---LGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred cHHHHHHHHHHHccCCCCcCcHHHHHHHHHH---hCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 35689999999999 9999999999999999 999999999999999999999999999999999853
No 28
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=98.89 E-value=7.3e-10 Score=93.67 Aligned_cols=79 Identities=23% Similarity=0.368 Sum_probs=66.0
Q ss_pred HHHHHhhhcCCccccccCCCCCCCcHHHHHHHHhhhCCCceeccccCCC--CChHhHHhhHHHHHHHHH-HcCCC-CcCC
Q 005777 522 WANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKG--ETEEDKKLNATYIISVAR-KLGCS-IFLL 597 (677)
Q Consensus 522 W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aLi~~~~P~~i~~~~~~~~--~~~~~~~~n~~~a~~~A~-~lGi~-~~l~ 597 (677)
|++.++..+. ..|.||+ .||+||+++|+|||.|+|.+++++.+... .|-.+...|.+...+.+. +||.. .-++
T Consensus 1 ~~~~~~~~~~--~~v~dl~-~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~ 77 (85)
T PF11971_consen 1 WVNARCAPYF--PPVEDLT-QDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLE 77 (85)
T ss_pred CCCcccCCCC--cchhhhh-hhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCC
Confidence 6677777765 8999999 89999999999999999999999888743 366788899999999996 68764 3469
Q ss_pred cccccc
Q 005777 598 PEDIME 603 (677)
Q Consensus 598 ~eDi~~ 603 (677)
|||+..
T Consensus 78 ~edl~~ 83 (85)
T PF11971_consen 78 PEDLLY 83 (85)
T ss_pred HHHHhc
Confidence 999864
No 29
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.88 E-value=5.2e-09 Score=84.58 Aligned_cols=61 Identities=18% Similarity=0.337 Sum_probs=53.6
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHH----HHHHHHHhhcCCCCCcccHHHHHHHH
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKED----EIKAIMGESHTNMEDEVDFESYLRAY 88 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~----ei~~~l~~~d~d~~g~I~f~eF~~~~ 88 (677)
.|+++|+.||+ ++|+|+.+||..+++. +|...+.+ .++.+++.+|.|++|.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKH---LGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH---TTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHH---hcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 47899999999 9999999999999999 88766554 44555999999999999999999886
No 30
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.86 E-value=1.1e-08 Score=88.90 Aligned_cols=71 Identities=21% Similarity=0.321 Sum_probs=59.8
Q ss_pred HHHHHHHHhhhhc-C-CCC-ceehhhHHHHHHhh--hhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 22 ELRTLKSKFISTR-S-QSG-RVTVGDLPPLFAKL--KAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 22 e~~~l~~~F~~~D-~-~~G-~I~~~eL~~~l~~~--~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
-+..++++|+.|| + ++| +|+.+||+.+|++. ..++...++.++.+|++++|.|++|.|+|+||+.++..+-
T Consensus 8 a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 8 AMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 3678999999999 6 898 59999999999762 0013345788999999999999999999999999998873
No 31
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.79 E-value=2.3e-08 Score=85.74 Aligned_cols=73 Identities=19% Similarity=0.293 Sum_probs=63.5
Q ss_pred HHHHHHHHHHhhhhcC--C-CCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 20 QVELRTLKSKFISTRS--Q-SGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 20 ~~e~~~l~~~F~~~D~--~-~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
+..+..+-+.|+.||. + +|+|+.+||+.+|++...+|..++++++.+|++.+|.|++|.|+|+||+.++..+-
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 3457789999999997 5 78999999999997311269999999999999999999999999999999998763
No 32
>PTZ00183 centrin; Provisional
Probab=98.76 E-value=2.2e-08 Score=95.11 Aligned_cols=111 Identities=15% Similarity=0.167 Sum_probs=86.2
Q ss_pred hhhccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 13 WLQSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 13 ~~~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
+....+++.+..+++++|..+|. ++|+|+..|+..+++. +|..++..++..++..+|.+++|.|+|++|+.++...
T Consensus 6 ~~~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~---~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 82 (158)
T PTZ00183 6 SERPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRS---LGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKK 82 (158)
T ss_pred cccCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH---hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 34557899999999999999999 9999999999999998 8988899999999999999999999999999988664
Q ss_pred HhhhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHH
Q 005777 92 QARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVA 130 (677)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~ 130 (677)
.............+..++....+. ++..+...++.
T Consensus 83 ~~~~~~~~~l~~~F~~~D~~~~G~----i~~~e~~~~l~ 117 (158)
T PTZ00183 83 LGERDPREEILKAFRLFDDDKTGK----ISLKNLKRVAK 117 (158)
T ss_pred hcCCCcHHHHHHHHHHhCCCCCCc----CcHHHHHHHHH
Confidence 332222222234566666666665 55544444443
No 33
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.72 E-value=2.4e-08 Score=92.14 Aligned_cols=66 Identities=17% Similarity=0.355 Sum_probs=62.9
Q ss_pred HHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 22 ELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 22 e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
..++++.+|+.||- ++|+|+..+|+.+++. ||+++|++|+.+||.++|.|++|.|+-+||+++|..
T Consensus 104 t~eEi~~afrl~D~D~~Gkis~~~lkrvake---LgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAKE---LGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred cHHHHHHHHHcccccCCCCcCHHHHHHHHHH---hCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 46789999999999 9999999999999999 999999999999999999999999999999999864
No 34
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.69 E-value=4.5e-08 Score=84.80 Aligned_cols=68 Identities=24% Similarity=0.315 Sum_probs=59.4
Q ss_pred HHHHHHHhhhhc-C-CCCc-eehhhHHHHHHhhhhcC----CCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 23 LRTLKSKFISTR-S-QSGR-VTVGDLPPLFAKLKAFS----EMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 23 ~~~l~~~F~~~D-~-~~G~-I~~~eL~~~l~~~~~lg----~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
.+.++++|+.|| + ++|+ |+..||+.+|++. +| ..+++++++++++.+|.|++|.|+|++|+.++..+-
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~--lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTE--LSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHH--HHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 467999999997 9 9995 9999999999741 44 356899999999999999999999999999997753
No 35
>PTZ00184 calmodulin; Provisional
Probab=98.66 E-value=4.4e-08 Score=91.85 Aligned_cols=109 Identities=15% Similarity=0.234 Sum_probs=84.3
Q ss_pred hccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHh
Q 005777 15 QSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 15 ~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~ 93 (677)
..++++++.+.+++.|..+|. ++|.|+..|+..++.. +|..++.+++..+++.+|.+++|.|+|++|+.++.....
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~ 78 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS---LGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMK 78 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH---hCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhcc
Confidence 467899999999999999999 9999999999999998 898899999999999999999999999999998875422
Q ss_pred hhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHH
Q 005777 94 RAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVA 130 (677)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~ 130 (677)
...........+..++....+. ++..+.+.++.
T Consensus 79 ~~~~~~~~~~~F~~~D~~~~g~----i~~~e~~~~l~ 111 (149)
T PTZ00184 79 DTDSEEEIKEAFKVFDRDGNGF----ISAAELRHVMT 111 (149)
T ss_pred CCcHHHHHHHHHHhhCCCCCCe----EeHHHHHHHHH
Confidence 1111111233455555555555 55555555444
No 36
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.63 E-value=1.1e-07 Score=82.67 Aligned_cols=70 Identities=17% Similarity=0.260 Sum_probs=59.7
Q ss_pred HHHHHHHHhhhhcC--C-CCceehhhHHHHHHhhhh--cCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 22 ELRTLKSKFISTRS--Q-SGRVTVGDLPPLFAKLKA--FSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 22 e~~~l~~~F~~~D~--~-~G~I~~~eL~~~l~~~~~--lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
-...++++|..||. + +|+|+..||+.+|++.-+ +|..+++++++++++++|.+++|.|+|++|+.++..+
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 35679999999985 5 699999999999985100 3668899999999999999999999999999998654
No 37
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.63 E-value=9.6e-08 Score=81.97 Aligned_cols=70 Identities=17% Similarity=0.329 Sum_probs=61.8
Q ss_pred HHHHHHHHHHhhhhcC---CCCceehhhHHHHHHhhhhcCCCC----cHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 20 QVELRTLKSKFISTRS---QSGRVTVGDLPPLFAKLKAFSEMF----KEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 20 ~~e~~~l~~~F~~~D~---~~G~I~~~eL~~~l~~~~~lg~~~----t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
++++++++++|..||+ ++|+|+.++|..+++.. +|..+ +++++..|+..+|.+++|.|+|++|+.++..+
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~--~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETE--LPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHH--hhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4678899999999999 78999999999999752 46544 59999999999999999999999999998765
No 38
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.58 E-value=2.2e-07 Score=79.82 Aligned_cols=69 Identities=12% Similarity=0.201 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhh-hcC-CCC-ceehhhHHHHHHhhhhc-----CCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 21 VELRTLKSKFIS-TRS-QSG-RVTVGDLPPLFAKLKAF-----SEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 21 ~e~~~l~~~F~~-~D~-~~G-~I~~~eL~~~l~~~~~l-----g~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
..+..|..+|+. +|+ |+| +|+.+||+.+|.. . +......++.++++++|.|+||.|+|+||+.++..+-
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~---e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNT---ELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHH---hhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 447789999999 778 875 9999999999987 3 3456678999999999999999999999999998763
No 39
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.58 E-value=1.4e-07 Score=76.11 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=56.4
Q ss_pred HHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 26 LKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 26 l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
++++|..+|+ ++|+|+.+|+..+|++ +| +++++++++++.++.+.+|.|+|+||+.++..+.
T Consensus 1 ~~~~F~~~D~~~~G~i~~~el~~~l~~---~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~ 63 (67)
T cd00052 1 YDQIFRSLDPDGDGLISGDEARPFLGK---SG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIA 63 (67)
T ss_pred ChHHHHHhCCCCCCcCcHHHHHHHHHH---cC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 3678999999 9999999999999998 77 4889999999999999999999999999886653
No 40
>KOG2046 consensus Calponin [Cytoskeleton]
Probab=98.57 E-value=1.9e-07 Score=89.47 Aligned_cols=89 Identities=24% Similarity=0.450 Sum_probs=71.0
Q ss_pred HhHHHHHHHHHhh--CCCCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHHHhhcccc
Q 005777 393 REERCFRLWINSL--GTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSL 470 (677)
Q Consensus 393 ~q~~~f~~WiN~~--~~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~~ 470 (677)
.++..++.||... .....-.|+..-|+||++||+|+++|.|+.+ ++++.+ ++.|+++||+++.+.+++..|++-
T Consensus 25 ~~~~el~~WI~~~~~~~~~~~~~f~~~LKDG~iLCkl~N~l~p~~~--~~~~~s--~~~f~qmEnIs~Fi~a~~~ygv~~ 100 (193)
T KOG2046|consen 25 ELEKELREWIENVVLTELPARGDFQDLLKDGVILCKLINKLYPGVV--KKINES--KMAFVQMENISNFIKAAKKYGVPE 100 (193)
T ss_pred HHHHHHHHHHHHhhccCCCcccCHHHHHcchHHHHHHHHHhCcCcc--cccccc--cccHHHHHHHHHHHHHHHhcCCCh
Confidence 3456678899995 3334467899999999999999999999665 444444 799999999999999999999987
Q ss_pred ccc-cccccccChhhh
Q 005777 471 VNV-AGNDIVQGNKKL 485 (677)
Q Consensus 471 ~~i-~~~div~g~~kl 485 (677)
+.+ .+.|+.+|....
T Consensus 101 ~d~FqtvDLfE~kd~~ 116 (193)
T KOG2046|consen 101 VDLFQTVDLFEGKDMA 116 (193)
T ss_pred hhcccccccccCCCHH
Confidence 765 577888876433
No 41
>PF14658 EF-hand_9: EF-hand domain
Probab=98.55 E-value=1.7e-07 Score=74.46 Aligned_cols=60 Identities=22% Similarity=0.400 Sum_probs=56.7
Q ss_pred HHhhhhcC-CCCceehhhHHHHHHhhhhcCC-CCcHHHHHHHHHhhcCCCC-CcccHHHHHHHHHH
Q 005777 28 SKFISTRS-QSGRVTVGDLPPLFAKLKAFSE-MFKEDEIKAIMGESHTNME-DEVDFESYLRAYLN 90 (677)
Q Consensus 28 ~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~-~~t~~ei~~~l~~~d~d~~-g~I~f~eF~~~~~~ 90 (677)
.+|..||+ +.|.|.+.+|...|++ +|. .+++.+++++..++|+++. |.|+|+.|+.+|..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra---~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRA---VTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHH---HcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 47999999 9999999999999999 887 9999999999999999988 99999999999975
No 42
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.55 E-value=2.1e-07 Score=71.96 Aligned_cols=52 Identities=15% Similarity=0.388 Sum_probs=49.3
Q ss_pred CCCceehhhHHHHHHhhhhcCCC-CcHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 36 QSGRVTVGDLPPLFAKLKAFSEM-FKEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 36 ~~G~I~~~eL~~~l~~~~~lg~~-~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
.+|+|+.++|+.+|.. +|.. +++++++.++..+|.|++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~~---~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSK---LGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHH---TTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHH---hCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 4799999999999988 8999 99999999999999999999999999999875
No 43
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=98.46 E-value=4.9e-07 Score=81.93 Aligned_cols=108 Identities=24% Similarity=0.358 Sum_probs=88.1
Q ss_pred ccCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHH
Q 005777 118 HAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENH 197 (677)
Q Consensus 118 ~~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv 197 (677)
...+.++.++.+.||...|.+. +.| ..||.+.|+||++||++++...|..|.++. ..++|-.+||+
T Consensus 8 ~~~~~~~~kev~~Wie~~l~~k--------~~p-pgdll~~lkdGv~lCril~ea~~~~I~yKe-----SkmpFVQmenI 73 (178)
T COG5199 8 CPGMDKQQKEVTLWIETVLGEK--------FEP-PGDLLSLLKDGVRLCRILNEASPLDIKYKE-----SKMPFVQMENI 73 (178)
T ss_pred CCCCHHHHHHHHHHHHHHHHhh--------hCC-cccHHHHHhcchHHHHHHhhcCcccceecc-----cCCceeeHHHH
Confidence 3457788999999999999986 233 368999999999999999999998875432 35689999999
Q ss_pred HHHHHHHHHcCceeec-cCCcccccC-chHHHHHHHHHHHHHHH
Q 005777 198 TLCLNSAKAIGCTVVN-IGTQDLVEG-RPHLLLGLISQIIKIQL 239 (677)
Q Consensus 198 ~~~L~~~k~~G~~~~~-i~~~di~~g-~~~~iL~Liw~li~~~~ 239 (677)
..+|++++..+++--. +.+.|+++. ++..++--|..+-++-+
T Consensus 74 s~Fin~~~k~~vpe~elFQT~DLFE~kd~~qV~~~l~slSRya~ 117 (178)
T COG5199 74 SSFINGLKKLRVPEYELFQTNDLFEAKDLRQVVICLYSLSRYAQ 117 (178)
T ss_pred HHHHHHHHHhCCCHHHHHHhhhHHhhcCHHHHHHHHHHHHHHHH
Confidence 9999999999965433 889999996 57778877888776644
No 44
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=98.46 E-value=5.5e-08 Score=82.30 Aligned_cols=69 Identities=20% Similarity=0.288 Sum_probs=57.4
Q ss_pred CCcccccCCCCCccchHHHHHHHHhhCCCCCCC------CCCCCCCHHHHHHHHHHHHHh-CCCcc-ccCccccccC
Q 005777 285 GYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSP------ATFDTKDPTERASKVIEQAEK-MDCKR-YLTPKDIVEG 353 (677)
Q Consensus 285 ~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~~------~~l~~~~~~~~~~~a~~~ae~-lgi~~-~l~peDi~~~ 353 (677)
.+...|.||+.||+||.++|+|||+|.|..+++ +..+..+...|.+.+.+.+++ ||... .++|+|+...
T Consensus 8 ~~~~~v~dl~~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~~edl~~~ 84 (85)
T PF11971_consen 8 PYFPPVEDLTQDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLEPEDLLYV 84 (85)
T ss_pred CCCcchhhhhhhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCCHHHHhcC
Confidence 445689999999999999999999999999976 334456778999999999996 87754 5799998753
No 45
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.40 E-value=4.9e-07 Score=86.21 Aligned_cols=79 Identities=14% Similarity=0.312 Sum_probs=72.2
Q ss_pred cCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhhh
Q 005777 17 QFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQARA 95 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~~ 95 (677)
.|++.|++.+...|..+|. .||+|+..||+.+|.+ +|.+-|---+++||+++|.|.||+|+|-||+-++.....+.
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEK---LgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaagE 168 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEK---LGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGE 168 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHH---hCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhccc
Confidence 6889999999999999999 9999999999999999 99999998999999999999999999999999987765544
Q ss_pred hhh
Q 005777 96 AAK 98 (677)
Q Consensus 96 ~~~ 98 (677)
..+
T Consensus 169 L~~ 171 (244)
T KOG0041|consen 169 LQE 171 (244)
T ss_pred ccc
Confidence 333
No 46
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.29 E-value=2e-06 Score=73.89 Aligned_cols=68 Identities=18% Similarity=0.345 Sum_probs=59.8
Q ss_pred HHHHHHHHhhhhcC-C--CCceehhhHHHHHHhhhhcCCCCc----HHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 22 ELRTLKSKFISTRS-Q--SGRVTVGDLPPLFAKLKAFSEMFK----EDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 22 e~~~l~~~F~~~D~-~--~G~I~~~eL~~~l~~~~~lg~~~t----~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
-+..+...|+.++. + +|+|+.+||+.+|.+. +|..++ ++++.++++.+|.|++|.|+|+||+.++..+
T Consensus 6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~--~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKE--LPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHH--hhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 36678899999986 3 7999999999999741 677777 9999999999999999999999999999765
No 47
>PLN02964 phosphatidylserine decarboxylase
Probab=98.23 E-value=1.8e-06 Score=98.55 Aligned_cols=104 Identities=15% Similarity=0.124 Sum_probs=86.2
Q ss_pred ccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcC-CCCcHHH---HHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 16 SQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFS-EMFKEDE---IKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg-~~~t~~e---i~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
..|++.|+++++++|..||+ ++|+| ++.++++ +| ..+++++ ++++++.+|.|++|.|+|+||+.+|..
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrs---lG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~ 207 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVS---CSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKA 207 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHH---hCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 46788999999999999999 99997 9999999 99 5899887 899999999999999999999999987
Q ss_pred HHhhhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHHH
Q 005777 91 LQARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAH 131 (677)
Q Consensus 91 l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~w 131 (677)
+... ...+.....|..|+++..+. ++.+|.+.++..
T Consensus 208 lg~~-~seEEL~eaFk~fDkDgdG~----Is~dEL~~vL~~ 243 (644)
T PLN02964 208 FGNL-VAANKKEELFKAADLNGDGV----VTIDELAALLAL 243 (644)
T ss_pred hccC-CCHHHHHHHHHHhCCCCCCc----CCHHHHHHHHHh
Confidence 6432 22333456788888888877 888888775443
No 48
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.22 E-value=2e-06 Score=77.69 Aligned_cols=67 Identities=10% Similarity=0.308 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 19 TQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 19 t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
.+-..+++-+-.+.||+ ++|.|...||+.+|.+ +|+.++++|+++++.-. .|.+|.|+|+.|++.+.
T Consensus 83 ~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLtt---lGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 83 DQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTT---LGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred ccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHH---HHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 34456778999999999 9999999999999999 99999999999999875 57889999999998764
No 49
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.20 E-value=3.7e-06 Score=65.54 Aligned_cols=60 Identities=22% Similarity=0.444 Sum_probs=56.6
Q ss_pred HHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 005777 26 LKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAY 88 (677)
Q Consensus 26 l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~ 88 (677)
++.+|..+|. ++|.|+..|+..+++. +|...+.+++..++..++.+++|.|+|++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKS---LGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH---hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 6788999999 9999999999999999 8999999999999999999999999999998765
No 50
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.11 E-value=6.7e-06 Score=75.62 Aligned_cols=64 Identities=14% Similarity=0.329 Sum_probs=60.9
Q ss_pred HHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 23 LRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 23 ~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
.+.+..||..||. ++|.|..+.|+.+|.. +|..++++|+++|++.+-.|..|.++|..|+.++.
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt---~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLTT---MGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHHH---hcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 3469999999999 9999999999999999 99999999999999999999999999999999886
No 51
>PTZ00183 centrin; Provisional
Probab=98.06 E-value=9e-06 Score=77.08 Aligned_cols=64 Identities=16% Similarity=0.373 Sum_probs=59.2
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
+.++.+|+.+|+ ++|+|+..|+..++.. +|..++.+++.+++..++.+++|.|+|++|..++..
T Consensus 90 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~---~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 90 EEILKAFRLFDDDKTGKISLKNLKRVAKE---LGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH---hCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 468899999999 9999999999999998 899999999999999999999999999999998854
No 52
>PTZ00184 calmodulin; Provisional
Probab=98.03 E-value=1.2e-05 Score=75.13 Aligned_cols=63 Identities=13% Similarity=0.438 Sum_probs=58.9
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
..++.+|+.+|. ++|+|+.+|+..+++. +|..++.+++..++..+|.+++|.|+|+||+.++.
T Consensus 84 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 84 EEIKEAFKVFDRDGNGFISAAELRHVMTN---LGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHhhCCCCCCeEeHHHHHHHHHH---HCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 467899999999 9999999999999998 89889999999999999999999999999998874
No 53
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=97.98 E-value=1.5e-05 Score=77.73 Aligned_cols=66 Identities=14% Similarity=0.274 Sum_probs=56.3
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCc--HHHH----HHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFK--EDEI----KAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t--~~ei----~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
..++=||+.||. ++|+|+.+|+..+++.+ +|...+ ++.+ +.++.++|.|+||.|+|+||.+++.+.
T Consensus 104 ~Kl~faF~vYD~~~~G~I~reel~~iv~~~--~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 104 EKLRFAFRVYDLDGDGFISREELKQILRMM--VGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHHHH--HccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 478889999999 99999999999999995 666555 5554 456788999999999999999998653
No 54
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.96 E-value=1.3e-05 Score=78.33 Aligned_cols=81 Identities=12% Similarity=0.195 Sum_probs=68.7
Q ss_pred chhhhccCCHHH-------HHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHH
Q 005777 11 DPWLQSQFTQVE-------LRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFE 82 (677)
Q Consensus 11 ~~~~~~~~t~~e-------~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~ 82 (677)
|......+...| +...+.+|+.||+ ++|.|+..||+.+|.. +|..++.+-++-+++..|.-.+|.|.|+
T Consensus 104 d~~~~G~i~f~EF~~Lw~~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~---~Gy~Lspq~~~~lv~kyd~~~~g~i~FD 180 (221)
T KOG0037|consen 104 DRDNSGTIGFKEFKALWKYINQWRNVFRTYDRDRSGTIDSSELRQALTQ---LGYRLSPQFYNLLVRKYDRFGGGRIDFD 180 (221)
T ss_pred cCCCCCccCHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHH---cCcCCCHHHHHHHHHHhccccCCceeHH
Confidence 333444555555 4556889999999 9999999999999999 9999999999999999998879999999
Q ss_pred HHHHHHHHHHhh
Q 005777 83 SYLRAYLNLQAR 94 (677)
Q Consensus 83 eF~~~~~~l~~~ 94 (677)
+|+..+..|+.-
T Consensus 181 ~FI~ccv~L~~l 192 (221)
T KOG0037|consen 181 DFIQCCVVLQRL 192 (221)
T ss_pred HHHHHHHHHHHH
Confidence 999998877663
No 55
>KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton]
Probab=97.90 E-value=3.2e-08 Score=113.85 Aligned_cols=206 Identities=13% Similarity=0.050 Sum_probs=148.1
Q ss_pred HHHHHHHHhhCCCCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCC-CCCchhHHHHHHHHHHHHHHhhcccccccc
Q 005777 396 RCFRLWINSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKP-PIKMPFRKVENCNQVVKIGKELNFSLVNVA 474 (677)
Q Consensus 396 ~~f~~WiN~~~~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~-~~~~~~~~ieN~~~~l~~~k~~g~~~~~i~ 474 (677)
-||+.|++-+....++.+|..++.||+.|..+++.++.... +++.+. |+ .++.+|++.++......+...+||.
T Consensus 31 ~T~~~t~~~~~aG~~~~slk~~~~dg~~~p~~v~vl~~~~~--skv~~~~p~---~q~~~~v~~a~~~ft~d~r~~~nig 105 (1113)
T KOG0518|consen 31 GTVTVTYDPQRAGFYILSLKYDGSDGVNLPSLVQVLSAVDT--SKVKKKGPG---IQGLHNVREALNKFTVDNRKETNIG 105 (1113)
T ss_pred ceEEEEEccccCcceeEEEEecCccccccceeeEEeecccc--ceeEEecCC---ccCcchhhhhhhhhhhccceeeccC
Confidence 34555566666778899999999999999999999987644 555443 32 7899999999999997779999999
Q ss_pred ccccccChhhhHHHHHHHHHHHHHHHHhhhccc-CCCCCCCCHHHHHHHHHHHhhhcCCccccccCCCCCCCcHHHHHHH
Q 005777 475 GNDIVQGNKKLILAFLWQLMRFTMLQLLKNLRT-HSQGKEITDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLEL 553 (677)
Q Consensus 475 ~~div~g~~kliL~LlW~lir~~~~~~~~~l~~-~~~~~~~~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aL 553 (677)
+.+|++++.+++++++|+++.-+....-+-... ...+....+-.+..|-...+. .+...+|+ ++|.+|.||-++
T Consensus 106 s~hivd~v~~~~g~~~~~~v~~~~dg~y~~k~~p~e~~~h~~e~~~~e~~~~~sP----~~~~v~~~-td~n~~~Alg~~ 180 (1113)
T KOG0518|consen 106 SAHIVDHVVKLIGSLTWTLVQDYGDGIYKTKRTPKEKGEHEVEVLYDEKPVPASP----FVVKVNEG-TDWNDVQALGPG 180 (1113)
T ss_pred CcccccccccccccceeEeeeccCCcceeeecCchhccchhhhhhhcccccccCC----ceeccccc-cCcccceEeccc
Confidence 999999999999999999974332222110000 001111122234445433332 36688999 899999999999
Q ss_pred HhhhCCCce-eccccCCCCChHhHHhhHHHHHHHHHHc-CCCCcCCc----cccc--cCCccHHHHHHHH
Q 005777 554 LSAVEPRVV-NWSLVTKGETEEDKKLNATYIISVARKL-GCSIFLLP----EDIM--EVNQKMILILTAS 615 (677)
Q Consensus 554 i~~~~P~~i-~~~~~~~~~~~~~~~~n~~~a~~~A~~l-Gi~~~l~~----eDi~--~~d~k~i~tyls~ 615 (677)
+..-+|+.. .|.....+ ....|+..|++-+.++ -.++...+ -.+. .+++.++++|++.
T Consensus 181 le~~~vg~p~~f~v~~~G----a~~gnl~~a~~gpse~~~~~~di~~g~c~veyip~~~gd~sv~~~~gg 246 (1113)
T KOG0518|consen 181 LESARVGKPNVFEVETPG----AGQGNLEVAVEGPSEALTVIPDIKPGSCSVEYIPPEPGDYSVNTYYGG 246 (1113)
T ss_pred hhhcccCCCceeEEecCC----ccccceeeeecChhhhcccccccCCCcceeeecCCCCCceEEeeeecc
Confidence 999999888 67777664 3457899999988753 34555555 3343 3689999999876
No 56
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=97.90 E-value=2.7e-05 Score=70.81 Aligned_cols=102 Identities=22% Similarity=0.420 Sum_probs=76.2
Q ss_pred HhHHHHHHHHHhhCCC--CcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHHHhhcccc
Q 005777 393 REERCFRLWINSLGTA--TYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSL 470 (677)
Q Consensus 393 ~q~~~f~~WiN~~~~~--~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~~ 470 (677)
.|++..+.||...+.. ..-.||.+.|+||++||++++...|..+.||. .+++|..+||+...++++++.+++-
T Consensus 13 ~~~kev~~Wie~~l~~k~~ppgdll~~lkdGv~lCril~ea~~~~I~yKe-----SkmpFVQmenIs~Fin~~~k~~vpe 87 (178)
T COG5199 13 KQQKEVTLWIETVLGEKFEPPGDLLSLLKDGVRLCRILNEASPLDIKYKE-----SKMPFVQMENISSFINGLKKLRVPE 87 (178)
T ss_pred HHHHHHHHHHHHHHHhhhCCcccHHHHHhcchHHHHHHhhcCcccceecc-----cCCceeeHHHHHHHHHHHHHhCCCH
Confidence 4567778899996432 23479999999999999999999999998875 2678999999999999999987642
Q ss_pred cc-cccccccc-ChhhhHHHHHHHHHHHHHH
Q 005777 471 VN-VAGNDIVQ-GNKKLILAFLWQLMRFTML 499 (677)
Q Consensus 471 ~~-i~~~div~-g~~kliL~LlW~lir~~~~ 499 (677)
-. ..-.|+.+ .|...++--+.++-||--.
T Consensus 88 ~elFQT~DLFE~kd~~qV~~~l~slSRya~K 118 (178)
T COG5199 88 YELFQTNDLFEAKDLRQVVICLYSLSRYAQK 118 (178)
T ss_pred HHHHHhhhHHhhcCHHHHHHHHHHHHHHHHH
Confidence 11 23346655 3556666667777665433
No 57
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.83 E-value=4.8e-05 Score=68.58 Aligned_cols=63 Identities=11% Similarity=0.192 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 005777 19 TQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAY 88 (677)
Q Consensus 19 t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~ 88 (677)
.+....++.-+|..+|. ++|+|+.+||..++ . ...+..+..++..+|.|+||.|+|+||...+
T Consensus 43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~-l------~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR-L------DPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH-c------cchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 35567889999999999 99999999999876 1 2457788999999999999999999999988
No 58
>KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton]
Probab=97.74 E-value=1.7e-07 Score=107.99 Aligned_cols=194 Identities=15% Similarity=0.040 Sum_probs=139.7
Q ss_pred chhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHHHHHHHHHHHcCceeeccCCcccccCchHHHHHH
Q 005777 151 STNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGL 230 (677)
Q Consensus 151 ~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~~G~~~~~i~~~di~~g~~~~iL~L 230 (677)
.+.+|..+..||+.|..++++++.. +..++++.-+. +|+.+|+..+++.....+...+||+..+|++++.++++++
T Consensus 45 ~~~slk~~~~dg~~~p~~v~vl~~~--~~skv~~~~p~--~q~~~~v~~a~~~ft~d~r~~~nigs~hivd~v~~~~g~~ 120 (1113)
T KOG0518|consen 45 YILSLKYDGSDGVNLPSLVQVLSAV--DTSKVKKKGPG--IQGLHNVREALNKFTVDNRKETNIGSAHIVDHVVKLIGSL 120 (1113)
T ss_pred eeEEEEecCccccccceeeEEeecc--ccceeEEecCC--ccCcchhhhhhhhhhhccceeeccCCcccccccccccccc
Confidence 4567888999999999999999876 34666665332 7899999999999988779999999999999999999999
Q ss_pred HHHHHHHHHhhccccccCcccccccCCCchhhhhhCCCcHHHHHHHHHHHhhhcCCcccccCCCCCccchHHHHHHHHhh
Q 005777 231 ISQIIKIQLLADLNLKKTPQLVELVDDNNDVEELLGLPPEKVLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNAL 310 (677)
Q Consensus 231 iw~li~~~~~~~i~~~~~p~l~~l~~~~e~~~~~~~~s~~~~LL~Wvn~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~ 310 (677)
+|.++.++-...-..+..| .+.+ ....+.++..|-...+. .+...||++||.|+.||.+++..-
T Consensus 121 ~~~~v~~~~dg~y~~k~~p-----~e~~-------~h~~e~~~~e~~~~~sP----~~~~v~~~td~n~~~Alg~~le~~ 184 (1113)
T KOG0518|consen 121 TWTLVQDYGDGIYKTKRTP-----KEKG-------EHEVEVLYDEKPVPASP----FVVKVNEGTDWNDVQALGPGLESA 184 (1113)
T ss_pred eeEeeeccCCcceeeecCc-----hhcc-------chhhhhhhcccccccCC----ceeccccccCcccceEeccchhhc
Confidence 9999988721111111111 0111 11233345555443221 356899999999999999999999
Q ss_pred CCCCC-CCCCCCCCCHHHHHHHHHHHHHh-CCCccccCc----cccccCCCc--chHHHHHH
Q 005777 311 APEHC-SPATFDTKDPTERASKVIEQAEK-MDCKRYLTP----KDIVEGSPN--LNLAFVAH 364 (677)
Q Consensus 311 ~P~~~-~~~~l~~~~~~~~~~~a~~~ae~-lgi~~~l~p----eDi~~~~~~--~~l~~va~ 364 (677)
+|+.. .+....+.....|++.+++-+.+ +-..+.+.+ ..+....++ ++++|+..
T Consensus 185 ~vg~p~~f~v~~~Ga~~gnl~~a~~gpse~~~~~~di~~g~c~veyip~~~gd~sv~~~~gg 246 (1113)
T KOG0518|consen 185 RVGKPNVFEVETPGAGQGNLEVAVEGPSEALTVIPDIKPGSCSVEYIPPEPGDYSVNTYYGG 246 (1113)
T ss_pred ccCCCceeEEecCCccccceeeeecChhhhcccccccCCCcceeeecCCCCCceEEeeeecc
Confidence 99987 46666667778899999999887 333444555 444445544 67777655
No 59
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.64 E-value=0.00036 Score=73.98 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCC-CcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 19 TQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEM-FKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 19 t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~-~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
+++--.+++..|+.||. ++|.++.++|.+.+.+ ++.+ +..+-...+++.+|.|.||.+||+||.+.+..-
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~---l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~ 80 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEK---LDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK 80 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHh---cCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh
Confidence 44445578999999999 9999999999999999 7765 677778889999999999999999999988653
No 60
>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]
Probab=97.62 E-value=7e-05 Score=81.65 Aligned_cols=73 Identities=29% Similarity=0.364 Sum_probs=65.9
Q ss_pred chhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHHHHHHHHHHH-cCceeec-cCCcccccCc
Q 005777 151 STNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKA-IGCTVVN-IGTQDLVEGR 223 (677)
Q Consensus 151 ~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~-~G~~~~~-i~~~di~~g~ 223 (677)
.+-+|...|+|||+||.|+|-|.|+.||.++||.++-+++|-++.|+..+|.+|.. .|..-.. +.|.|+++-+
T Consensus 29 ~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~~Fglr~seLF~afDLfdv~ 103 (865)
T KOG2996|consen 29 QVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCEKFGLRDSELFEAFDLFDVR 103 (865)
T ss_pred hHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHHHhCCchhhhcchhhhhhhh
Confidence 57899999999999999999999999999999999888999999999999999985 7886554 8899999854
No 61
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.60 E-value=0.00034 Score=59.85 Aligned_cols=69 Identities=19% Similarity=0.286 Sum_probs=56.8
Q ss_pred HHHHHHHHhhhhcCCCCceehhhHHHHHHhhhhcC----CCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 22 ELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFS----EMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 22 e~~~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg----~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
-+..|...|..+-.+.|.++..||+.+|++ -++ ..-..+.++++|+..|.|+||.|+|.||+.++..+-
T Consensus 6 ai~~lI~~FhkYaG~~~tLsk~Elk~Ll~~--Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 6 SMEKMMLTFHKFAGEKNYLNRDDLQKLMEK--EFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHHHcCCCCcCCHHHHHHHHHH--HhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 466788999999765679999999999975 133 233467899999999999999999999999998763
No 62
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.59 E-value=0.00016 Score=63.93 Aligned_cols=71 Identities=18% Similarity=0.282 Sum_probs=60.9
Q ss_pred ccCCHHHHHHHHHHhhhhcCCCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 16 SQFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
.++|++|...+...|...|.++|+|+.++.+.+|.+ - .++.+.+.++-.-+|.|++|.++++||+-+|.=+
T Consensus 2 ~~ls~~e~~~y~~~F~~l~~~~g~isg~~a~~~f~~---S--~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 2 PKLSPEEKQKYDQIFQSLDPQDGKISGDQAREFFMK---S--GLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp ---SCCHHHHHHHHHHCTSSSTTEEEHHHHHHHHHH---T--TSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCeEeHHHHHHHHHH---c--CCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 367889999999999999888899999999999987 4 4888999999999999999999999999877544
No 63
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.49 E-value=0.00013 Score=48.75 Aligned_cols=27 Identities=19% Similarity=0.388 Sum_probs=15.2
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
+++++|+.||+ ++|+|+.+|+..+|++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 34555555555 5555555555555554
No 64
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.47 E-value=0.00013 Score=48.79 Aligned_cols=29 Identities=24% Similarity=0.429 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 63 EIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 63 ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
|++++++.+|.|+||.|+|+||+.+|..+
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 68899999999999999999999999764
No 65
>PLN02964 phosphatidylserine decarboxylase
Probab=97.47 E-value=0.0003 Score=80.68 Aligned_cols=72 Identities=10% Similarity=0.165 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 18 FTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 18 ~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
.++++...++++|..+|. ++|.|+.+|+..+|.. +|...+++++.++++.+|.|++|.|+++||..++...+
T Consensus 173 pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~---lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 173 PVETERSFARRILAIVDYDEDGQLSFSEFSDLIKA---FGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH---hccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 456666679999999999 9999999999999998 89889999999999999999999999999999987753
No 66
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.45 E-value=0.00038 Score=68.20 Aligned_cols=99 Identities=13% Similarity=0.203 Sum_probs=81.7
Q ss_pred HHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhhhhhhcCC
Q 005777 23 LRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQARAAAKSGG 101 (677)
Q Consensus 23 ~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~~~~~~~~ 101 (677)
...+...|...|+ ++|+|+.+||..+|... -...++.+-++-||.-+|.+.+|.|+|.||..+...+++=
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~--~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~W------- 126 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNG--TWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQW------- 126 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcC--CCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH-------
Confidence 4468899999999 99999999999999851 2457999999999999999999999999999999998764
Q ss_pred CCCCcchhhhhhccccccCCHHHHHHHHHHHHh
Q 005777 102 SKNSSSFLKAATTTVHHAINESEKASYVAHINS 134 (677)
Q Consensus 102 ~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~ 134 (677)
.+.+..++++.+++ ++..|.+.-..-+-.
T Consensus 127 r~vF~~~D~D~SG~----I~~sEL~~Al~~~Gy 155 (221)
T KOG0037|consen 127 RNVFRTYDRDRSGT----IDSSELRQALTQLGY 155 (221)
T ss_pred HHHHHhcccCCCCc----ccHHHHHHHHHHcCc
Confidence 36778888888888 777777654443333
No 67
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=97.35 E-value=0.00014 Score=69.29 Aligned_cols=99 Identities=21% Similarity=0.299 Sum_probs=67.2
Q ss_pred HHHHHHHHhhhcCCccccccCCCCCCCcHHHHHHHHhhhCCCceeccccCCCCChHhHHhhHHHH-HHHHHHcCCCCcCC
Q 005777 519 ILNWANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKGETEEDKKLNATYI-ISVARKLGCSIFLL 597 (677)
Q Consensus 519 LL~W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aLi~~~~P~~i~~~~~~~~~~~~~~~~n~~~a-~~~A~~lGi~~~l~ 597 (677)
|++|+|.. .. .....++. .+|+||..++.|+++|.|..+++....++.+...+..|.+.- ..+.+++|++ ++
T Consensus 1 l~~WL~~l-~l---s~~~~n~~-rDfsdG~lvAEIl~~y~p~~vdlh~y~~~~s~~~Kl~NW~~Ln~kvl~kl~~~--l~ 73 (158)
T PF06294_consen 1 LLKWLQSL-DL---SRPPKNIR-RDFSDGYLVAEILSRYYPKLVDLHNYSNGNSVAQKLNNWETLNEKVLKKLGIK--LD 73 (158)
T ss_dssp HHHHHHHS------S--SS-HH-HHHTTSHHHHHHHHHH-TTT---SS----SSHHHHHHHHHHHHHHTTGGGT------
T ss_pred ChHHHhcC-CC---CCCCCchH-HHcccccHHHHHHHHHCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHcCCC--CC
Confidence 67999982 22 35677887 789999999999999999999999999888888888999887 7777889985 56
Q ss_pred ccccc---cCCccHHHHHHHHHHHHhhcCC
Q 005777 598 PEDIM---EVNQKMILILTASIMYWSLQQQ 624 (677)
Q Consensus 598 ~eDi~---~~d~k~i~tyls~l~~~~~~~~ 624 (677)
.+++. .+.+-.+...+.++|..+....
T Consensus 74 ~~~i~~i~~~~~Gaae~lL~~L~~~l~~~~ 103 (158)
T PF06294_consen 74 KEDIEGIINCKPGAAESLLYQLYTKLTKKK 103 (158)
T ss_dssp HHHHHHHHTT-TTTTHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 66554 5788888999999999985543
No 68
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.35 E-value=0.00022 Score=48.37 Aligned_cols=29 Identities=14% Similarity=0.295 Sum_probs=25.6
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHH-hhhhcC
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFA-KLKAFS 56 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~-~~~~lg 56 (677)
+++++|+.||+ ++|+|+.+||..+|+ + +|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~---lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKS---LG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHH---TT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHh---cC
Confidence 57899999999 999999999999999 6 66
No 69
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=97.30 E-value=0.00033 Score=77.33 Aligned_cols=84 Identities=24% Similarity=0.333 Sum_probs=65.0
Q ss_pred HHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccC----CCChHHHHHHHHHHHH
Q 005777 127 SYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKR----VLNPWERNENHTLCLN 202 (677)
Q Consensus 127 ~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~----~~~~~~~~eNv~~~L~ 202 (677)
...+.|...|... +| .||-..|-|||+||+|+|.+.|.++. .|+.+. .++..++..||..+|+
T Consensus 580 QLRk~iEtRLk~s------Lp-----~Dl~aALtDGViLChLaN~lRPRSV~--SIHVPSPaV~klsmarcrrNVdnFLe 646 (722)
T KOG0532|consen 580 QLRKLIETRLKVS------LP-----EDLAAALTDGVILCHLANHLRPRSVA--SIHVPSPAVPKLSMARCRRNVDNFLE 646 (722)
T ss_pred HHHHHHHHHhccc------Cc-----hhHHHHhhcchhhHhhhcccCCCCcc--ceecCCCccchhHHHHHHHhHHHHHH
Confidence 3556666666553 44 47999999999999999999998773 444442 2345678899999999
Q ss_pred HHHHcCceeec-cCCcccccCc
Q 005777 203 SAKAIGCTVVN-IGTQDLVEGR 223 (677)
Q Consensus 203 ~~k~~G~~~~~-i~~~di~~g~ 223 (677)
+|++.|+.-.+ +++.||+.+.
T Consensus 647 aCRkiGVpEa~lCS~~Dilq~~ 668 (722)
T KOG0532|consen 647 ACRKIGVPEADLCSPMDILQKI 668 (722)
T ss_pred HHHHcCCChHhhcCHHHhhhhh
Confidence 99999998777 7888998874
No 70
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=97.23 E-value=0.0018 Score=63.46 Aligned_cols=111 Identities=15% Similarity=0.194 Sum_probs=85.4
Q ss_pred cCCHHHHHHHHHHhhhhcC--CCCceehhhHHHHHHhhhhcCC-CCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHh
Q 005777 17 QFTQVELRTLKSKFISTRS--QSGRVTVGDLPPLFAKLKAFSE-MFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~--~~G~I~~~eL~~~l~~~~~lg~-~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~ 93 (677)
+|++.|+. ..|+.|-. .+|.++.++++.+++. ++- .-+..-.+.+.+.+|.|+||.|+|.||+..+.-+..
T Consensus 22 ~f~~~ei~---~~Yr~Fk~~cP~G~~~~~~F~~i~~~---~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~r 95 (193)
T KOG0044|consen 22 KFSKKEIQ---QWYRGFKNECPSGRLTLEEFREIYAS---FFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSR 95 (193)
T ss_pred CCCHHHHH---HHHHHhcccCCCCccCHHHHHHHHHH---HCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcC
Confidence 45555554 45555544 6999999999999998 553 334455677899999999999999999998866544
Q ss_pred hhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHHHHHhhhCC
Q 005777 94 RAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAHINSFLGE 138 (677)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~ 138 (677)
+. ..+....+|+.++..+.|. ++..|.-.++++|=...+.
T Consensus 96 Gt-~eekl~w~F~lyD~dgdG~----It~~Eml~iv~~i~~m~~~ 135 (193)
T KOG0044|consen 96 GT-LEEKLKWAFRLYDLDGDGY----ITKEEMLKIVQAIYQMTGS 135 (193)
T ss_pred Cc-HHHHhhhhheeecCCCCce----EcHHHHHHHHHHHHHHccc
Confidence 43 4444447799999999998 8999999999988887775
No 71
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=97.17 E-value=0.00072 Score=61.69 Aligned_cols=63 Identities=14% Similarity=0.251 Sum_probs=54.1
Q ss_pred HHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHH----HHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 26 LKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEI----KAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 26 l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei----~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
.+-||+.+|- ++++|..+||...+++| ....++++|+ +.++.++|.|+||.++|.||-.++.+
T Consensus 110 ~~YAFkIYDfd~D~~i~~~DL~~~l~~l--Tr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 110 AKYAFKIYDFDGDEFIGHDDLEKTLTSL--TRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred hhheeEEeecCCCCcccHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 5568999999 99999999999999983 3346787776 46888999999999999999998865
No 72
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=97.13 E-value=0.00079 Score=64.18 Aligned_cols=97 Identities=21% Similarity=0.273 Sum_probs=69.5
Q ss_pred HHHHHhhCCCCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHH-HHHHHhhccccccccccc
Q 005777 399 RLWINSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQV-VKIGKELNFSLVNVAGND 477 (677)
Q Consensus 399 ~~WiN~~~~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~-l~~~k~~g~~~~~i~~~d 477 (677)
.+|++++.....+.++..||.||+.+++++....|..|+...+ +++.+...|+.|=... ..+++.+|+.+..=..++
T Consensus 2 ~~WL~~l~ls~~~~n~~rDfsdG~lvAEIl~~y~p~~vdlh~y--~~~~s~~~Kl~NW~~Ln~kvl~kl~~~l~~~~i~~ 79 (158)
T PF06294_consen 2 LKWLQSLDLSRPPKNIRRDFSDGYLVAEILSRYYPKLVDLHNY--SNGNSVAQKLNNWETLNEKVLKKLGIKLDKEDIEG 79 (158)
T ss_dssp HHHHHHS--S--SS-HHHHHTTSHHHHHHHHHH-TTT---SS------SSHHHHHHHHHHHHHHTTGGGT----HHHHHH
T ss_pred hHHHhcCCCCCCCCchHHHcccccHHHHHHHHHCCCCcccccc--CCCCCHHHHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 5799998777888999999999999999999999998864433 3457888999999998 999999999877656678
Q ss_pred cccChhhhHHHHHHHHHHHH
Q 005777 478 IVQGNKKLILAFLWQLMRFT 497 (677)
Q Consensus 478 iv~g~~kliL~LlW~lir~~ 497 (677)
|+.|.+..+-.|+.+|+.+-
T Consensus 80 i~~~~~Gaae~lL~~L~~~l 99 (158)
T PF06294_consen 80 IINCKPGAAESLLYQLYTKL 99 (158)
T ss_dssp HHTT-TTTTHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHH
Confidence 88999999999999996433
No 73
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.04 E-value=0.0012 Score=79.07 Aligned_cols=120 Identities=11% Similarity=0.191 Sum_probs=83.9
Q ss_pred cCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCc--HH-----HHHHHHHhhcCCCCCcccHHHHHHHH
Q 005777 17 QFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFK--ED-----EIKAIMGESHTNMEDEVDFESYLRAY 88 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t--~~-----ei~~~l~~~d~d~~g~I~f~eF~~~~ 88 (677)
..|++++.++.-+|+.||+ .+|+++..+++.+|++ +|++++ ++ +++++|.-+|++.+|.|+..+|++.|
T Consensus 2246 GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrs---lgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afm 2322 (2399)
T KOG0040|consen 2246 GVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRS---LGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFM 2322 (2399)
T ss_pred CCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHh---cCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHH
Confidence 4689999999999999999 9999999999999999 998763 44 89999999999999999999999999
Q ss_pred HHHHhhhhhhc-CCCCCCcchhhhh--hc--cccccCCHHHHHHHHHHHHhhhCCC
Q 005777 89 LNLQARAAAKS-GGSKNSSSFLKAA--TT--TVHHAINESEKASYVAHINSFLGED 139 (677)
Q Consensus 89 ~~l~~~~~~~~-~~~~~~~~~~~~~--t~--~~~~~~~~~q~~~~~~wIN~~L~~~ 139 (677)
.+--....-.+ ..-.+++..+... .+ .+..+.+..|..-|+..|-.+...+
T Consensus 2323 i~~ETeNI~s~~eIE~AfraL~a~~~yvtke~~~~~ltreqaefc~s~m~~~~e~~ 2378 (2399)
T KOG0040|consen 2323 ISKETENILSSEEIEDAFRALDAGKPYVTKEELYQNLTREQAEFCMSKMKPYAETS 2378 (2399)
T ss_pred HhcccccccchHHHHHHHHHhhcCCccccHHHHHhcCCHHHHHHHHHHhhhhcccc
Confidence 65322211111 1111222222200 01 1112455666666777777766543
No 74
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=96.85 E-value=0.0025 Score=67.98 Aligned_cols=68 Identities=18% Similarity=0.378 Sum_probs=57.6
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHhh-hhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAKL-KAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~-~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
..|...|+.+|. ++|.|+.+|++.+.+-| .-+...++++++-++-+.+|.|+||.|++.||+.++.-+
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 347789999999 99999999999987752 113347889999999999999999999999999988543
No 75
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=96.80 E-value=0.0025 Score=67.77 Aligned_cols=66 Identities=11% Similarity=0.180 Sum_probs=61.0
Q ss_pred HHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 23 LRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 23 ~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
..+|.+.|+.+|. +||.|+..|+.+.+++ +|.++++++...+++.+|.++++.|+|+||-..+.--
T Consensus 81 E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~---~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~ 147 (463)
T KOG0036|consen 81 ELELYRIFQSIDLEHDGKIDPNEIWRYLKD---LGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLY 147 (463)
T ss_pred HHHHHHHHhhhccccCCccCHHHHHHHHHH---hCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcC
Confidence 3468999999999 9999999999999999 9999999999999999999999999999998876543
No 76
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=96.79 E-value=0.0024 Score=62.60 Aligned_cols=68 Identities=13% Similarity=0.214 Sum_probs=54.0
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHHhh-hhcCC-------CCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFAKL-KAFSE-------MFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~~~-~~lg~-------~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
.++=+|+.+|. |+|+|+..|+-.+++++ ..+|. .-.++-+..+++.+|.|.||.++++||...+..-+
T Consensus 101 kl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 101 KLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADP 177 (193)
T ss_pred HhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCH
Confidence 45667999999 99999999998888764 22342 12456678899999999999999999999876543
No 77
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=96.73 E-value=0.0026 Score=62.20 Aligned_cols=109 Identities=17% Similarity=0.224 Sum_probs=83.3
Q ss_pred ccCCHHHHHHHHHHhhhhcC--CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCc-ccHHHHHHHHHHHH
Q 005777 16 SQFTQVELRTLKSKFISTRS--QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDE-VDFESYLRAYLNLQ 92 (677)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~--~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~-I~f~eF~~~~~~l~ 92 (677)
.+|+..|+..|...|..+|+ ++|+++.+|+..+.. +..++= ...+++.++.+.+|. |+|++|++.+.-..
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~----~~~Np~---~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~ 97 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE----LALNPL---ADRIIDRFDTDGNGDPVDFEEFVRLLSVFS 97 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH----HhcCcH---HHHHHHHHhccCCCCccCHHHHHHHHhhhc
Confidence 45999999999999999999 689999999999984 455554 345666677777777 99999999998776
Q ss_pred hhhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHHHHHhhhCC
Q 005777 93 ARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAHINSFLGE 138 (677)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~ 138 (677)
.....+....-+|+.++...+|. ++.++.+..+ +..++.
T Consensus 98 ~~~~~~~Kl~faF~vYD~~~~G~----I~reel~~iv---~~~~~~ 136 (187)
T KOG0034|consen 98 PKASKREKLRFAFRVYDLDGDGF----ISREELKQIL---RMMVGE 136 (187)
T ss_pred CCccHHHHHHHHHHHhcCCCCCc----CcHHHHHHHH---HHHHcc
Confidence 66655544445788888888887 7776666643 344544
No 78
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.40 E-value=0.01 Score=44.78 Aligned_cols=50 Identities=10% Similarity=0.257 Sum_probs=41.4
Q ss_pred ceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 39 RVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 39 ~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
+++.+|++.+|+. +...+.++-+..++++.|.+++|.++.+||...+..|
T Consensus 1 kmsf~Evk~lLk~---~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLKM---MNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHHH---TT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH---HccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 4688999999999 9999999999999999999999999999999988765
No 79
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.23 E-value=0.005 Score=39.57 Aligned_cols=23 Identities=22% Similarity=0.463 Sum_probs=15.0
Q ss_pred HHHHhhhhcC-CCCceehhhHHHH
Q 005777 26 LKSKFISTRS-QSGRVTVGDLPPL 48 (677)
Q Consensus 26 l~~~F~~~D~-~~G~I~~~eL~~~ 48 (677)
|+++|+.+|. ++|.|+.+|+..+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHH
Confidence 3556666776 6777777666654
No 80
>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]
Probab=96.11 E-value=0.01 Score=65.32 Aligned_cols=83 Identities=17% Similarity=0.268 Sum_probs=66.1
Q ss_pred HHHHHHhhC----------CCCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHHHh-h
Q 005777 398 FRLWINSLG----------TATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKE-L 466 (677)
Q Consensus 398 f~~WiN~~~----------~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~-~ 466 (677)
..+|+-... .+..|-+|...||||+.||+|++.|.|..++.|.++..|..++|-++.|++..+.+|.. .
T Consensus 7 CarWLidckVLptnhrvtw~~a~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~~F 86 (865)
T KOG2996|consen 7 CARWLIDCKVLPTNHRVTWDSAQVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCEKF 86 (865)
T ss_pred HHHHHhhccccCCCcccccCcchHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHHHh
Confidence 467877631 13568899999999999999999999999999999988888899999999999999986 3
Q ss_pred ccccc-ccccccccc
Q 005777 467 NFSLV-NVAGNDIVQ 480 (677)
Q Consensus 467 g~~~~-~i~~~div~ 480 (677)
|..-. -..|.|+.+
T Consensus 87 glr~seLF~afDLfd 101 (865)
T KOG2996|consen 87 GLRDSELFEAFDLFD 101 (865)
T ss_pred CCchhhhcchhhhhh
Confidence 33211 135666665
No 81
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=95.87 E-value=0.018 Score=64.19 Aligned_cols=86 Identities=16% Similarity=0.242 Sum_probs=64.8
Q ss_pred HHHHHhhCCCCcchhHHHHhhhHHHHHHHHHHhCCCccccccccCC--CCCchhHHHHHHHHHHHHHHhhcccccc-ccc
Q 005777 399 RLWINSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKP--PIKMPFRKVENCNQVVKIGKELNFSLVN-VAG 475 (677)
Q Consensus 399 ~~WiN~~~~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~--~~~~~~~~ieN~~~~l~~~k~~g~~~~~-i~~ 475 (677)
++-|...+...--.||-..|.||++||+|++.+.|.+|.-=++..| |.....++-.||...|++|+++||.-.. +++
T Consensus 582 Rk~iEtRLk~sLp~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLeaCRkiGVpEa~lCS~ 661 (722)
T KOG0532|consen 582 RKLIETRLKVSLPEDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLEACRKIGVPEADLCSP 661 (722)
T ss_pred HHHHHHHhcccCchhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHHHHHHcCCChHhhcCH
Confidence 4455555555556789999999999999999999988854444444 2233467889999999999999997544 578
Q ss_pred cccccChhh
Q 005777 476 NDIVQGNKK 484 (677)
Q Consensus 476 ~div~g~~k 484 (677)
.||+.+..+
T Consensus 662 ~Dilq~~~r 670 (722)
T KOG0532|consen 662 MDILQKIER 670 (722)
T ss_pred HHhhhhhcc
Confidence 899887443
No 82
>KOG0516 consensus Dystonin, GAS (Growth-arrest-specific protein), and related proteins [Cytoskeleton]
Probab=95.83 E-value=0.0054 Score=75.97 Aligned_cols=107 Identities=26% Similarity=0.424 Sum_probs=84.1
Q ss_pred hHHhHHHHHHHHHhhC--CCCcchhHHHHhh--hHHHHHHHHHHhCCCccccccccCC--CCCchhHHHHHHHHHHHHHH
Q 005777 391 TSREERCFRLWINSLG--TATYVNNVFEDVR--NGWVLLEVLDKVSPGSVSWKQATKP--PIKMPFRKVENCNQVVKIGK 464 (677)
Q Consensus 391 ~~~q~~~f~~WiN~~~--~~~~v~dl~~dl~--DG~~L~~lle~l~~~~v~~k~~~~~--~~~~~~~~ieN~~~~l~~~k 464 (677)
..+|+++|+.|++.++ ....|++++++|+ +.+.+..+.+.+....- ..+ ....+++.++|+..++++++
T Consensus 72 ~~~~k~~f~~~~~~~l~~~~~~ve~~~~~l~~~~~i~~l~~~e~~~~~~~-----~~~~~~~~~~~~~l~n~q~~l~~~k 146 (1047)
T KOG0516|consen 72 DLVQKKLFPDWLAKELEKVMKHVEDLYEDLRDLNSISLLEVEELLVAVRK-----QEPEQDRQERLHDLENVQAALTALK 146 (1047)
T ss_pred HHHHHhccchhhHHHHHHhccchhHHhhhhhhhhHHHHHHHHHhhhhhhh-----hhHHHHHHHHHhhHHHHHhhhccch
Confidence 6889999999999986 4578999999999 55555555554433221 010 11456789999999999999
Q ss_pred hhcccccc--ccccccccChhhhHHHHHHHH-HHHHHHHHh
Q 005777 465 ELNFSLVN--VAGNDIVQGNKKLILAFLWQL-MRFTMLQLL 502 (677)
Q Consensus 465 ~~g~~~~~--i~~~div~g~~kliL~LlW~l-ir~~~~~~~ 502 (677)
+..+.+++ |...+|..|+++.+|+++|.+ .+|+..+++
T Consensus 147 ~~~~el~~~~~~~~~~~~~~~~~~l~~~~ei~l~~Q~~~ll 187 (1047)
T KOG0516|consen 147 EDLAELVNFLIRDAEIKLGNPELGLGLIWEIILHFQYVKLL 187 (1047)
T ss_pred HHHHHHHHhhcccchhhccchhhhhhhHHHHHHHHHHHHhh
Confidence 99999999 999999999999999999999 478776554
No 83
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=95.77 E-value=0.016 Score=63.37 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=44.7
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
..++.+|+.||. ++|+|+.+|+. | +..++..+|.|+||.|+|+||...+..
T Consensus 334 ~~l~~aF~~~D~dgdG~Is~~E~~---------~-------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 334 HAAQEIFRLYDLDGDGFITREEWL---------G-------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHH---------H-------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 457889999999 99999999983 1 467899999999999999999998865
No 84
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=95.55 E-value=0.019 Score=63.54 Aligned_cols=82 Identities=12% Similarity=0.243 Sum_probs=74.4
Q ss_pred hhccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 14 LQSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 14 ~~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
.+=.+|++++..++.-|..+|. +.|++++.++.++|++ .+...+++..++.+.+++.+.+|.++..||..+|..++
T Consensus 583 ~~i~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~---~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 583 IPIKLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKS---ENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred cccccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH---hcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 3446799999999999999999 9999999999999999 88889999999999999999999999999999999888
Q ss_pred hhhhhh
Q 005777 93 ARAAAK 98 (677)
Q Consensus 93 ~~~~~~ 98 (677)
.+.++.
T Consensus 660 ~g~~~~ 665 (680)
T KOG0042|consen 660 NGCTEG 665 (680)
T ss_pred cCChHH
Confidence 765443
No 85
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=95.51 E-value=0.017 Score=37.04 Aligned_cols=25 Identities=20% Similarity=0.405 Sum_probs=22.3
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHH
Q 005777 64 IKAIMGESHTNMEDEVDFESYLRAY 88 (677)
Q Consensus 64 i~~~l~~~d~d~~g~I~f~eF~~~~ 88 (677)
++++++.+|.|+||.|+++||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4678999999999999999999864
No 86
>KOG0516 consensus Dystonin, GAS (Growth-arrest-specific protein), and related proteins [Cytoskeleton]
Probab=95.19 E-value=0.01 Score=73.44 Aligned_cols=112 Identities=21% Similarity=0.176 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCccccccc-ccCCCChHHHHHHHHH
Q 005777 121 NESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAIN-TKRVLNPWERNENHTL 199 (677)
Q Consensus 121 ~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~-~~~~~~~~~~~eNv~~ 199 (677)
...++..|..|+|..+..- .+.+.+++.+|.+ ...+.+++...+.... +... ......+++.++|+..
T Consensus 72 ~~~~k~~f~~~~~~~l~~~---------~~~ve~~~~~l~~-~~~i~~l~~~e~~~~~-~~~~~~~~~~~~~~~l~n~q~ 140 (1047)
T KOG0516|consen 72 DLVQKKLFPDWLAKELEKV---------MKHVEDLYEDLRD-LNSISLLEVEELLVAV-RKQEPEQDRQERLHDLENVQA 140 (1047)
T ss_pred HHHHHhccchhhHHHHHHh---------ccchhHHhhhhhh-hhHHHHHHHHHhhhhh-hhhhHHHHHHHHHhhHHHHHh
Confidence 5678889999999999884 5678999999985 3333444443322110 1000 0001235679999999
Q ss_pred HHHHHHHcCceeec--cCCcccccCchHHHHHHHHHHHHHHHhhcc
Q 005777 200 CLNSAKAIGCTVVN--IGTQDLVEGRPHLLLGLISQIIKIQLLADL 243 (677)
Q Consensus 200 ~L~~~k~~G~~~~~--i~~~di~~g~~~~iL~Liw~li~~~~~~~i 243 (677)
+|++++...+.+++ +..++|..|+++.+++++|.++.+|+...+
T Consensus 141 ~l~~~k~~~~el~~~~~~~~~~~~~~~~~~l~~~~ei~l~~Q~~~l 186 (1047)
T KOG0516|consen 141 ALTALKEDLAELVNFLIRDAEIKLGNPELGLGLIWEIILHFQYVKL 186 (1047)
T ss_pred hhccchHHHHHHHHhhcccchhhccchhhhhhhHHHHHHHHHHHHh
Confidence 99999999999999 999999999999999999999999997444
No 87
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.55 E-value=0.095 Score=46.23 Aligned_cols=71 Identities=13% Similarity=0.180 Sum_probs=50.1
Q ss_pred hccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhh---cCC-C---CcHHHHHHHH----HhhcCCCCCcccHH
Q 005777 15 QSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKA---FSE-M---FKEDEIKAIM----GESHTNMEDEVDFE 82 (677)
Q Consensus 15 ~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~---lg~-~---~t~~ei~~~l----~~~d~d~~g~I~f~ 82 (677)
..++|++|++ -.-|.+.|- ++|.++--||..++.-.-. -|. + +++.|+..|+ +.-|.|+||.|+|.
T Consensus 60 ~a~mtpeqlq--fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYg 137 (144)
T KOG4065|consen 60 VAKMTPEQLQ--FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYG 137 (144)
T ss_pred hhhCCHHHHh--hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHH
Confidence 3466777764 235777798 9999999999998875211 232 2 3466766555 55588899999999
Q ss_pred HHHHH
Q 005777 83 SYLRA 87 (677)
Q Consensus 83 eF~~~ 87 (677)
||++.
T Consensus 138 EflK~ 142 (144)
T KOG4065|consen 138 EFLKR 142 (144)
T ss_pred HHHhh
Confidence 99864
No 88
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=94.04 E-value=0.073 Score=35.87 Aligned_cols=27 Identities=11% Similarity=0.146 Sum_probs=24.0
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 63 EIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 63 ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
+++++++.+|.|++|.|+++||..++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 578899999999999999999999987
No 89
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=94.01 E-value=0.1 Score=63.43 Aligned_cols=111 Identities=28% Similarity=0.335 Sum_probs=77.3
Q ss_pred HHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHHHHHHHHHHHc
Q 005777 128 YVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAI 207 (677)
Q Consensus 128 ~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~~ 207 (677)
..+||...|+++ +| +..+|.+.|+.||.|++|.+...|+.-- .+-+.... .|.--.|++.++++++..
T Consensus 47 ~k~W~e~cl~ed------L~---pttele~~LRNGV~LAkL~~~f~PD~~~--~~~~~~~~-~frHtdNi~q~~~~me~i 114 (1401)
T KOG2128|consen 47 AKRWIEECLGED------LP---PTTELEEGLRNGVYLAKLGQFFAPDLEQ--TIYKANDL-HFRHTDNINQWLRAMESI 114 (1401)
T ss_pred HHHHHHHHhccc------CC---CchHHHHHhhhhhHHHHHHhhcCCccee--eeeecCCc-eeecchhHHHHHHHHhhc
Confidence 458999999998 32 3578999999999999999999996442 12222123 378889999999999999
Q ss_pred Cceeec-cCCcccccCchHHHHHHHHHHHHHHHhhccccccCcccccc
Q 005777 208 GCTVVN-IGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTPQLVEL 254 (677)
Q Consensus 208 G~~~~~-i~~~di~~g~~~~iL~Liw~li~~~~~~~i~~~~~p~l~~l 254 (677)
|.+-.- ....||++|+--.+.--|..|+.. +.. ....|.+..+
T Consensus 115 glP~iF~~E~~Dvy~~kN~p~i~cihaLs~~--l~k--~~~aP~l~~~ 158 (1401)
T KOG2128|consen 115 GLPEIFYPETTDVYEGKNIPVIYCIHALSLY--LFK--QGKAPPLQNL 158 (1401)
T ss_pred CCCcccccchhhhhcCCCCceeeHHHHHHHH--Hhc--CCCCcccccc
Confidence 986443 567899999632244444444432 211 3456766554
No 90
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=93.42 E-value=0.05 Score=48.89 Aligned_cols=61 Identities=16% Similarity=0.273 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHH
Q 005777 21 VELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLR 86 (677)
Q Consensus 21 ~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~ 86 (677)
.....+.=.|..+|. +||+++..||..+... + ...+.=++.+++..|.|+||.|++.|+..
T Consensus 51 ~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~---l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 51 ECKRVVHWKFCQLDRNKDGVLDRSELKPLRRP---L--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GGHHHHHHHHHHH--T-SSEE-TTTTGGGGST---T--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhhHhhhcCCCCCccCHHHHHHHHHH---H--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 345567778999999 9999999999988765 4 45555688999999999999999999875
No 91
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.85 E-value=0.1 Score=32.98 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=15.7
Q ss_pred HHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 26 LKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 26 l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
++.+|+.+|. ++|+|+..++..++++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 4556666666 6666666666666543
No 92
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.40 E-value=0.14 Score=32.32 Aligned_cols=28 Identities=18% Similarity=0.296 Sum_probs=24.7
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 63 EIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 63 ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
|++.+++.+|.+++|.|++.+|..++..
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 4678899999999999999999998864
No 93
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=92.21 E-value=0.84 Score=49.91 Aligned_cols=132 Identities=13% Similarity=0.171 Sum_probs=97.1
Q ss_pred CCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhc----CCCCCcccHHHHHHHHHHHH
Q 005777 18 FTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESH----TNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 18 ~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d----~d~~g~I~f~eF~~~~~~l~ 92 (677)
|+-+.-..+.-.|-.+|+ ++|.|+.++|..--. ..+|..-++.+++.+. .-.+|.++|++|+-.+..+.
T Consensus 272 FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d------~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e 345 (493)
T KOG2562|consen 272 FSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGD------HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEE 345 (493)
T ss_pred eeHHHHHHHHHHHhhhccccccccCHHHHHHHhc------cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhc
Confidence 455555566667888999 999999999986543 2466777788888433 34689999999999998886
Q ss_pred hhhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHH
Q 005777 93 ARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVA 172 (677)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l 172 (677)
.+.++.+ ....|+..+-++.|- .+..+.+-|-+-+-+.+..-+ .. ...|+ .+||.+...+
T Consensus 346 ~k~t~~S-leYwFrclDld~~G~----Lt~~el~~fyeeq~~rm~~~~-------~e---~l~fe-----d~l~qi~DMv 405 (493)
T KOG2562|consen 346 DKDTPAS-LEYWFRCLDLDGDGI----LTLNELRYFYEEQLQRMECMG-------QE---ALPFE-----DALCQIRDMV 405 (493)
T ss_pred cCCCccc-hhhheeeeeccCCCc----ccHHHHHHHHHHHHHHHHhcC-------CC---cccHH-----HHHHHHHHHh
Confidence 6554443 348999999999999 888899998887777776542 11 11344 4689998888
Q ss_pred cCC
Q 005777 173 VPG 175 (677)
Q Consensus 173 ~~~ 175 (677)
.|.
T Consensus 406 kP~ 408 (493)
T KOG2562|consen 406 KPE 408 (493)
T ss_pred Ccc
Confidence 754
No 94
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=91.68 E-value=0.12 Score=51.36 Aligned_cols=70 Identities=14% Similarity=0.256 Sum_probs=51.6
Q ss_pred HHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCc--HHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHh
Q 005777 22 ELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFK--EDEIKAIMGESHTNMEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 22 e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t--~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~ 93 (677)
--+.|+..|...|. .+|+|+..|+++-.++- +.+.+. .++-+-.++.+|+|+||.|.++||.--+...+.
T Consensus 99 srrklmviFsKvDVNtDrkisAkEmqrwImek--taEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskg 171 (362)
T KOG4251|consen 99 SRRKLMVIFSKVDVNTDRKISAKEMQRWIMEK--TAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKG 171 (362)
T ss_pred HHHHHHHHHhhcccCccccccHHHHHHHHHHH--HHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcC
Confidence 35679999999999 89999999998865540 332221 233344567789999999999999877766543
No 95
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.83 E-value=0.42 Score=49.95 Aligned_cols=66 Identities=11% Similarity=0.250 Sum_probs=53.1
Q ss_pred HHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhc-CCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 23 LRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAF-SEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 23 ~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~l-g~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
+..=++-|+.-|. ++|.+|.+|+...|.= - ...+..--|.+.|.+.|.|+||.|+|+||+.=|..-
T Consensus 162 ~~rDe~rFk~AD~d~dg~lt~EEF~aFLHP---Ee~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~ 229 (325)
T KOG4223|consen 162 IARDEERFKAADQDGDGSLTLEEFTAFLHP---EEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSH 229 (325)
T ss_pred HHHHHHHHhhcccCCCCcccHHHHHhccCh---hhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhc
Confidence 4445678999999 9999999999987753 1 123556678999999999999999999999866553
No 96
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.32 E-value=0.78 Score=50.20 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=65.9
Q ss_pred cCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhhh
Q 005777 17 QFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQARA 95 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~~ 95 (677)
++|++|.+.+-..|+.+-. -+|+|+-.--+..|.+ -+++.+|+..|-+-.|.|.||-+++.||+..|.-+-.+.
T Consensus 224 ~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtK-----Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVaRk 298 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTK-----SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVARK 298 (737)
T ss_pred ccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhh-----ccCchHHHHHHHhhcccCccccccHHHHHhhHhheeecc
Confidence 7899999999999999988 8999999988888887 468889999999999999999999999999997655443
No 97
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=89.25 E-value=0.76 Score=38.57 Aligned_cols=64 Identities=11% Similarity=0.257 Sum_probs=51.6
Q ss_pred HHHHHhhhhcCCCCceehhhHHHHHHhhhhcCC-CCcHHHHHHHHHhhcCC----CCCcccHHHHHHHHHH
Q 005777 25 TLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSE-MFKEDEIKAIMGESHTN----MEDEVDFESYLRAYLN 90 (677)
Q Consensus 25 ~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg~-~~t~~ei~~~l~~~d~d----~~g~I~f~eF~~~~~~ 90 (677)
++..+|..+-.+.+.+|.++|...|+.- -|. ..+.+++.++|.....+ ..+.+++++|.+.+..
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~e--Q~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREE--QGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHT--SS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHH--hccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 4678888884378999999999999861 355 47899999999988655 4789999999998854
No 98
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=88.60 E-value=0.79 Score=53.35 Aligned_cols=83 Identities=23% Similarity=0.251 Sum_probs=65.9
Q ss_pred HHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCcccccccccCCCChHHHHHHHHHHHHHHHHc
Q 005777 128 YVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAI 207 (677)
Q Consensus 128 ~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~~ 207 (677)
.-.||...++.. +| -.-+.+.|+.||.|.+|.++..|+.. ..|--. ..-.+...+|++.+|++....
T Consensus 49 aK~WIee~~~~~------l~----~~~fe~slRnGV~La~l~q~f~pd~~--~~iF~~-~~LQfrHtdNIN~Fld~i~~v 115 (1054)
T COG5261 49 AKIWIEEVIEEA------LP----ELCFEDSLRNGVFLAKLTQRFNPDLT--TVIFPA-DKLQFRHTDNINAFLDLIEHV 115 (1054)
T ss_pred HHHHHHHHhccC------Cc----hhhHHHHHhccchHHHHHHHhCCCce--eEeeec-ccceeeccccHHHHHhHhhhc
Confidence 346999999986 44 35688999999999999999999876 333322 234677889999999999999
Q ss_pred Cceeec-cCCcccccCc
Q 005777 208 GCTVVN-IGTQDLVEGR 223 (677)
Q Consensus 208 G~~~~~-i~~~di~~g~ 223 (677)
|++-.- +.-.||++|+
T Consensus 116 GlPe~FhFEl~DlYekK 132 (1054)
T COG5261 116 GLPESFHFELQDLYEKK 132 (1054)
T ss_pred CCcceeeeehHhhhccC
Confidence 986443 7888999985
No 99
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=88.44 E-value=1.7 Score=41.39 Aligned_cols=68 Identities=13% Similarity=0.272 Sum_probs=50.1
Q ss_pred HHHHhhhh---cC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHh
Q 005777 26 LKSKFIST---RS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 26 l~~~F~~~---D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~ 93 (677)
|+++|..| -+ +...++...+.++|+.-..++..+|..+++=++..+...+...|+|++|+.++..+-.
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~ 72 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAE 72 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHH
Confidence 44556655 34 6778999999999998444556799999999999987777778999999999877643
No 100
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=87.62 E-value=0.7 Score=35.16 Aligned_cols=31 Identities=10% Similarity=0.315 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 18 FTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 18 ~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
++.++ +...|..+|. ++|+|+.+|+..+|..
T Consensus 22 ~s~~e---~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 22 LSEEE---VDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SCHHH---HHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CCHHH---HHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 66666 6677999999 9999999999999864
No 101
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.78 E-value=1 Score=47.24 Aligned_cols=67 Identities=18% Similarity=0.179 Sum_probs=55.5
Q ss_pred HHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 22 ELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 22 e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
..+.|...|..+|. ++|.|+..||+.-+.. .-...-.++...-+.+.|.|.||.|+|++|...+...
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~---s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~ 142 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQ---SQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGR 142 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHH---HHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhc
Confidence 45679999999999 9999999999997765 3334555677788889999999999999999887654
No 102
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=85.49 E-value=1.2 Score=48.29 Aligned_cols=71 Identities=13% Similarity=0.210 Sum_probs=49.5
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHhhhh---cCC----CCc-----HHHHHHHH--HhhcCCCCCcccHHHHHHHH
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAKLKA---FSE----MFK-----EDEIKAIM--GESHTNMEDEVDFESYLRAY 88 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~---lg~----~~t-----~~ei~~~l--~~~d~d~~g~I~f~eF~~~~ 88 (677)
+.++-||++||. |||-|+.+|+..++.-.+. +|. .++ .-++..-+ .-+..++++.+++++|++.+
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 356779999999 9999999999988742100 121 011 11333222 33578899999999999999
Q ss_pred HHHHhh
Q 005777 89 LNLQAR 94 (677)
Q Consensus 89 ~~l~~~ 94 (677)
.+|+..
T Consensus 313 e~Lq~E 318 (489)
T KOG2643|consen 313 ENLQEE 318 (489)
T ss_pred HHHHHH
Confidence 998864
No 103
>KOG3000 consensus Microtubule-binding protein involved in cell cycle control [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=85.42 E-value=1.9 Score=45.17 Aligned_cols=93 Identities=19% Similarity=0.269 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhhcCCcccccCCCCCccchHHHHHHHHhhCCCCCC-----CCCCCCCCHHHHHHHHHHHHHhCCCcccc
Q 005777 271 KVLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCS-----PATFDTKDPTERASKVIEQAEKMDCKRYL 345 (677)
Q Consensus 271 ~~LL~Wvn~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~-----~~~l~~~~~~~~~~~a~~~ae~lgi~~~l 345 (677)
.-+|.|+|..+.. ++. +| .+...|-|||-|.+.+.|..++ +.+-.+.+...|.+..=+...++|+.+.+
T Consensus 18 ~E~laW~N~~l~~-n~~-kI----Ee~~tGaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk~lQ~~f~klgi~k~v 91 (295)
T KOG3000|consen 18 LEILAWINDLLQL-NLT-KI----EELCTGAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFKVLQTCFNKLGIDKVV 91 (295)
T ss_pred HHHHHHHHhhhhc-chh-hh----hhhcccchhhhhhhhccCCccccccccccccccchhhhhhHHHHHHHHhcCCcccc
Confidence 3489999987752 221 22 3567799999999999998774 34444556677777766777789999999
Q ss_pred CccccccCCCcchHHHHHHHHHhh
Q 005777 346 TPKDIVEGSPNLNLAFVAHIFQHR 369 (677)
Q Consensus 346 ~peDi~~~~~~~~l~~va~l~~~~ 369 (677)
.+++++.+..--++-|+--+.++|
T Consensus 92 ~vdkLvKg~~qDNlEF~qWfkkff 115 (295)
T KOG3000|consen 92 DVDKLVKGPFQDNLEFLQWFKKFF 115 (295)
T ss_pred cHHHHhcccccchHHHHHHHHHHh
Confidence 999999998777777765544444
No 104
>KOG3000 consensus Microtubule-binding protein involved in cell cycle control [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=84.39 E-value=2.9 Score=43.73 Aligned_cols=106 Identities=15% Similarity=0.154 Sum_probs=72.6
Q ss_pred CCCHHHHHHHHHHHhhhcCCccccccCCCCCCCcHHHHHHHHhhhCCCceeccccCCCCC-hHhHHhhHHHHHHHHHHcC
Q 005777 513 EITDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKGET-EEDKKLNATYIISVARKLG 591 (677)
Q Consensus 513 ~~~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aLi~~~~P~~i~~~~~~~~~~-~~~~~~n~~~a~~~A~~lG 591 (677)
.++--++|.|+|..++.. -.+|...- .|-|+|-|.+.+.|..|+...+..... .-+...|.+.-=....++|
T Consensus 14 ~~sR~E~laW~N~~l~~n--~~kIEe~~-----tGaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk~lQ~~f~klg 86 (295)
T KOG3000|consen 14 NESRLEILAWINDLLQLN--LTKIEELC-----TGAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFKVLQTCFNKLG 86 (295)
T ss_pred ccchHHHHHHHHhhhhcc--hhhhhhhc-----ccchhhhhhhhccCCccccccccccccccchhhhhhHHHHHHHHhcC
Confidence 445679999999987652 24565554 499999999999999998887765431 1233444444333336899
Q ss_pred CCCcCCccccccCCccHHHHHHHHHHHHhhcCCC
Q 005777 592 CSIFLLPEDIMEVNQKMILILTASIMYWSLQQQS 625 (677)
Q Consensus 592 i~~~l~~eDi~~~d~k~i~tyls~l~~~~~~~~~ 625 (677)
|.+.+.+++++.+...-.+.|+--+..+|-...+
T Consensus 87 i~k~v~vdkLvKg~~qDNlEF~qWfkkffd~~~~ 120 (295)
T KOG3000|consen 87 IDKVVDVDKLVKGPFQDNLEFLQWFKKFFDANYG 120 (295)
T ss_pred CcccccHHHHhcccccchHHHHHHHHHHhhccCC
Confidence 9999999999987655556665555555544333
No 105
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=83.99 E-value=1.4 Score=53.27 Aligned_cols=58 Identities=14% Similarity=0.336 Sum_probs=51.7
Q ss_pred HHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 28 SKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 28 ~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
..|+.+|. |.|.|+.+|+.++|.. ....|..|++-++.-+..|.+...+|++|+.-+.
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~----~k~ytqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEG----HKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhc----cccchhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 35888999 9999999999999986 5578999999999999999999999999987654
No 106
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=83.43 E-value=1.5 Score=52.39 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhCCCCcchhHHHHhhhHHHHHHHHHHhCCCcccccc---ccCCCCCchhHHHHHHHHHHHHHHh
Q 005777 395 ERCFRLWINSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQ---ATKPPIKMPFRKVENCNQVVKIGKE 465 (677)
Q Consensus 395 ~~~f~~WiN~~~~~~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~---~~~~~~~~~~~~ieN~~~~l~~~k~ 465 (677)
...+..|||+......+.+ +.||.||++|.+++..|-|..++-.+ ++..++....-++.|+...++.++.
T Consensus 9 ~~~Lv~Wv~tf~~~~~~~~-~~dL~DGv~L~evL~qIDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~~ 81 (713)
T PF05622_consen 9 CDSLVTWVQTFNLSAPCSS-YEDLSDGVALAEVLHQIDPEYFNDSWLSRIKEDVGDNWRLRVSNLKKLLRNIKS 81 (713)
T ss_dssp HHHHHHHHTT---SS---S-HHHHTTSHHHHHHHHHH-TTTS-HHHHTT--SGGGG-SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCC-HHHccchHHHHHHHHHhCccccCcHHhhcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 4578999999866656655 68999999999999999999876322 2222323344588999888877764
No 107
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=83.19 E-value=0.98 Score=47.11 Aligned_cols=64 Identities=5% Similarity=0.021 Sum_probs=49.7
Q ss_pred HHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 23 LRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 23 ~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
..-++-+|+.|+. .||+++.++|..+++. ++| +.+-.+-.++.++++..+|+|.|++|-+.+..
T Consensus 295 ~~iiq~afk~f~v~eDg~~ge~~ls~ilq~--~lg--v~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 295 PVIIQYAFKRFSVAEDGISGEHILSLILQV--VLG--VEVLRVPVLFPSIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred HHHHHHHHHhcccccccccchHHHHHHHHH--hcC--cceeeccccchhhhcccCcceeHHHHHHHHHh
Confidence 3457888999999 8999999888888886 256 33334567788888888899999999888764
No 108
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=82.39 E-value=0.89 Score=36.97 Aligned_cols=54 Identities=15% Similarity=0.196 Sum_probs=36.6
Q ss_pred HHHHHHhhhhcCCCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCC-------CCcccHHHHHHH
Q 005777 24 RTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNM-------EDEVDFESYLRA 87 (677)
Q Consensus 24 ~~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~-------~g~I~f~eF~~~ 87 (677)
+++.++|+.+-.+.++||..||+..|.. ++.+-++..+..-. .|..||..|+..
T Consensus 6 eqv~~aFr~lA~~KpyVT~~dLr~~l~p----------e~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~ 66 (69)
T PF08726_consen 6 EQVEEAFRALAGGKPYVTEEDLRRSLTP----------EQAEYCISRMPPYEGPDGDAIPGAYDYESFTNS 66 (69)
T ss_dssp HHHHHHHHHHCTSSSCEEHHHHHHHS-C----------CCHHHHHCCSEC--SSS----TTEEECHHHHCC
T ss_pred HHHHHHHHHHHcCCCcccHHHHHHHcCc----------HHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHH
Confidence 4578999999338899999999988754 23344444443322 267999999853
No 109
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=82.04 E-value=3 Score=43.20 Aligned_cols=97 Identities=23% Similarity=0.258 Sum_probs=64.7
Q ss_pred HHHhhhhcC-CCCceehhhHHHHHHhh--hhcCCCCcHHHHH-----------HHHHhhcCCCCCcccHHHHHHHHHHHH
Q 005777 27 KSKFISTRS-QSGRVTVGDLPPLFAKL--KAFSEMFKEDEIK-----------AIMGESHTNMEDEVDFESYLRAYLNLQ 92 (677)
Q Consensus 27 ~~~F~~~D~-~~G~I~~~eL~~~l~~~--~~lg~~~t~~ei~-----------~~l~~~d~d~~g~I~f~eF~~~~~~l~ 92 (677)
+..|.+.|. ++|+++-.||..+|.+= |+....-.++++. .+|+++|.|.|..|+.+||++.-.+-
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~k- 325 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNK- 325 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhc-
Confidence 346888899 99999999999988741 2223222233332 36778999999999999999765432
Q ss_pred hhhhhhcCCCCCCcchhhhhhccccccCCHHHHHHHHHHHHh
Q 005777 93 ARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAHINS 134 (677)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~~~wIN~ 134 (677)
.-..++.+. -+-+....|++++.+.|-+-+-.
T Consensus 326 ef~~p~e~W----------Etl~q~~~yTeEEL~~fE~e~A~ 357 (442)
T KOG3866|consen 326 EFNPPKEEW----------ETLGQKKVYTEEELQQFEREYAQ 357 (442)
T ss_pred ccCCcchhh----------hhhcccccccHHHHHHHHHHHHH
Confidence 222222333 33444667899999998875544
No 110
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=77.75 E-value=2.9 Score=33.05 Aligned_cols=30 Identities=17% Similarity=0.156 Sum_probs=27.0
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHHHHh
Q 005777 64 IKAIMGESHTNMEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 64 i~~~l~~~d~d~~g~I~f~eF~~~~~~l~~ 93 (677)
++++++.+|.|++|.|+.+||..++..+..
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~ 31 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGR 31 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTS
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcc
Confidence 678999999999999999999999987643
No 111
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=77.22 E-value=3.2 Score=48.03 Aligned_cols=64 Identities=9% Similarity=0.145 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 21 VELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 21 ~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
-....++..|..+|+ .+||+|-..-+.+|.. ..++...+..+-.-.|.|+||+++-+||+-.|.
T Consensus 192 ~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~q-----S~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 192 HNKLKYRQLFNALDKTRSGYLSGQQARSALGQ-----SGLPQNQLAHIWTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred hhhhHHHHHhhhcccccccccccHHHHHHHHh-----cCCchhhHhhheeeeccCCCCcccHHHHHHHHH
Confidence 345679999999999 9999999999988864 357888888888888999999999999987664
No 112
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=74.14 E-value=2.1 Score=46.55 Aligned_cols=57 Identities=5% Similarity=0.066 Sum_probs=45.6
Q ss_pred CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhh
Q 005777 36 QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQAR 94 (677)
Q Consensus 36 ~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~ 94 (677)
..+-|+..+++.+.+. +.|..+++.-++-++.-+|.|+||.++++||+.+|.+..-+
T Consensus 401 Ag~~i~~~~f~raa~~--vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~Rmhr 457 (489)
T KOG2643|consen 401 AGASIDEKTFQRAAKV--VTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRRMHR 457 (489)
T ss_pred cCCCCCHHHHHHHHHH--hcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHHhhc
Confidence 3567777888877776 36888887766777788899999999999999999876554
No 113
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=72.86 E-value=10 Score=41.43 Aligned_cols=62 Identities=11% Similarity=0.221 Sum_probs=45.7
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
.+|.+.|+.+|. .+|+|++.+-..+|..+ +|.+++-.-+..-+. ..+.||.++|.+-++.+.
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i--~~L~LPWr~L~~kla--~~s~d~~v~Y~~~~~~l~ 526 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMENI--TGLNLPWRLLRPKLA--NGSDDGKVEYKSTLDNLD 526 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHHH--hcCCCcHHHhhhhcc--CCCcCcceehHhHHHHhh
Confidence 457889999999 99999999999999985 677777555443333 234566787777766553
No 114
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.41 E-value=2.4 Score=45.10 Aligned_cols=84 Identities=12% Similarity=0.186 Sum_probs=60.5
Q ss_pred cchhhhccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHH-HhhcCCCCCcccHHHHHHH
Q 005777 10 SDPWLQSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIM-GESHTNMEDEVDFESYLRA 87 (677)
Q Consensus 10 ~~~~~~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l-~~~d~d~~g~I~f~eF~~~ 87 (677)
.|+.+...++..+ .++++|+.+|+ ++|+|+..-++.+|.. +...+++.+.-.++ ..+|+..-|.|=.++|+.-
T Consensus 297 ~d~~l~~~~~~s~--q~rR~f~a~d~~d~nfis~s~~~~vm~~---~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~ 371 (449)
T KOG2871|consen 297 CDGHLVVPENPSE--QLRRNFHAYDPEDNNFISCSGLQIVMTA---LNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGE 371 (449)
T ss_pred cCccccCCCCCCH--HHHhhhhccCccCCCeeecHHHHHHHHH---hcccccCHHHHHHhcCccChhhcceEEecccccc
Confidence 3555555555543 68999999999 9999999999999999 77666665544444 4457777778877888877
Q ss_pred HHHHHhhhhhh
Q 005777 88 YLNLQARAAAK 98 (677)
Q Consensus 88 ~~~l~~~~~~~ 98 (677)
+........++
T Consensus 372 ~~p~tgs~g~~ 382 (449)
T KOG2871|consen 372 FFPTTGSSGPG 382 (449)
T ss_pred ccCccccCCCc
Confidence 76655444333
No 115
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=64.75 E-value=8.2 Score=45.39 Aligned_cols=97 Identities=14% Similarity=0.263 Sum_probs=71.6
Q ss_pred HHHHHHHHhhhcCCcccccCCCCCccchHHHHHHHHhhCCCCCC----CCCCCCCCHHHHHHHHHHHHHhCCCcc--ccC
Q 005777 273 LLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCS----PATFDTKDPTERASKVIEQAEKMDCKR--YLT 346 (677)
Q Consensus 273 LL~Wvn~~l~~~~~~~~V~nFs~d~~DG~al~~Ll~~~~P~~~~----~~~l~~~~~~~~~~~a~~~ae~lgi~~--~l~ 346 (677)
...|+...+..+ .+-.-|.++.++|+.++.|...+.|+..- -+.+. -...+|+..-++..+.+|+|- ..+
T Consensus 49 aK~WIee~~~~~---l~~~~fe~slRnGV~La~l~q~f~pd~~~~iF~~~~LQ-frHtdNIN~Fld~i~~vGlPe~FhFE 124 (1054)
T COG5261 49 AKIWIEEVIEEA---LPELCFEDSLRNGVFLAKLTQRFNPDLTTVIFPADKLQ-FRHTDNINAFLDLIEHVGLPESFHFE 124 (1054)
T ss_pred HHHHHHHHhccC---CchhhHHHHHhccchHHHHHHHhCCCceeEeeecccce-eeccccHHHHHhHhhhcCCcceeeee
Confidence 467999877542 34567889999999999999999999862 23332 456689999999999999998 578
Q ss_pred ccccccCC--Ccc--hHHHHHHHHHhhcCCCC
Q 005777 347 PKDIVEGS--PNL--NLAFVAHIFQHRNGLSM 374 (677)
Q Consensus 347 peDi~~~~--~~~--~l~~va~l~~~~~gl~~ 374 (677)
..|+.++. |+- .+--++++. .-||.++
T Consensus 125 l~DlYekKN~pkViyciHaL~~~l-s~~g~tp 155 (1054)
T COG5261 125 LQDLYEKKNIPKVIYCIHALISML-SWPGKTP 155 (1054)
T ss_pred hHhhhccCCcchhHHHHHHHHHHh-cCCCCCc
Confidence 89999986 662 233333333 4577766
No 116
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=63.06 E-value=7.9 Score=42.83 Aligned_cols=64 Identities=14% Similarity=0.279 Sum_probs=46.2
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCC------CCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhh
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSE------MFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQAR 94 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~------~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~ 94 (677)
-+..+|+.||+ ++|.++.++...++.. ... +...+-|+-.+.. +....++|.+|..++.+.+..
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~---t~l~~~~~f~~d~efI~~~Fg~---~~~r~~ny~~f~Q~lh~~~~E 179 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQ---TNLHHHIPFNWDSEFIKLHFGD---IRKRHLNYAEFTQFLHEFQLE 179 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhc---cccccCCCccCCcchHHHHhhh---HHHHhccHHHHHHHHHHHHHH
Confidence 36789999999 9999999999999987 332 2334445544433 334468999999999887654
No 117
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=61.96 E-value=10 Score=34.18 Aligned_cols=26 Identities=23% Similarity=0.326 Sum_probs=22.8
Q ss_pred HHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 26 LKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 26 l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
....|..+|. ++|+||.+|+..++.+
T Consensus 82 ~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 82 IKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 3668999999 9999999999999844
No 118
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=61.01 E-value=12 Score=46.64 Aligned_cols=83 Identities=18% Similarity=0.263 Sum_probs=59.7
Q ss_pred HHHHHHhhCCC--CcchhHHHHhhhHHHHHHHHHHhCCCccccccccCCCCCchhHHHHHHHHHHHHHHhhcccccc-cc
Q 005777 398 FRLWINSLGTA--TYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSLVN-VA 474 (677)
Q Consensus 398 f~~WiN~~~~~--~~v~dl~~dl~DG~~L~~lle~l~~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~~~~-i~ 474 (677)
-.+||...+.+ ++-.+|.+.||+|++|++|.+...|..-. ..+... ..-|+.-.|+++.+++++..|++-.= .-
T Consensus 47 ~k~W~e~cl~edL~pttele~~LRNGV~LAkL~~~f~PD~~~-~~~~~~--~~~frHtdNi~q~~~~me~iglP~iF~~E 123 (1401)
T KOG2128|consen 47 AKRWIEECLGEDLPPTTELEEGLRNGVYLAKLGQFFAPDLEQ-TIYKAN--DLHFRHTDNINQWLRAMESIGLPEIFYPE 123 (1401)
T ss_pred HHHHHHHHhcccCCCchHHHHHhhhhhHHHHHHhhcCCccee-eeeecC--CceeecchhHHHHHHHHhhcCCCcccccc
Confidence 37899997543 45678999999999999999999996432 222222 23488999999999999986664211 12
Q ss_pred ccccccChh
Q 005777 475 GNDIVQGNK 483 (677)
Q Consensus 475 ~~div~g~~ 483 (677)
-.||.+|.-
T Consensus 124 ~~Dvy~~kN 132 (1401)
T KOG2128|consen 124 TTDVYEGKN 132 (1401)
T ss_pred hhhhhcCCC
Confidence 368888763
No 119
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=60.95 E-value=10 Score=28.29 Aligned_cols=28 Identities=7% Similarity=0.101 Sum_probs=24.5
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 64 IKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 64 i~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
+..++..+|.+.+|.|++++|..++..+
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~ 29 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSL 29 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 5677888899999999999999998765
No 120
>cd08540 SAM_PNT-ERG Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor. SAM Pointed domain of ERG subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It may participate in formation of homodimers or heterodimers with ETS-2, Fli-1, ER81, and Pu-1. However, dimeric forms are inactive and SAM Pointed domain is not essential for dimerization, since ER81 and Pu-1 do not have it. In mouse, a regulator of this type binds the ESET histone H3-specific methyltransferase (human homolog is SETDB1), followed by modification of local chromatin structure through histone methylation. ERG regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. The Erg gene is a proto-oncogene. It is a target of chromosomal translocations resulting in fusions with new neighboring genes. Chimeric proteins were found in solid tumors such as myeloid leukemia or Ewing's sarcoma. Members of this subfamily are po
Probab=57.71 E-value=13 Score=30.81 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHhhhcCCccccccCCCCCCC--cHHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANRTSQIESFKDKNLS--NGIFFLELL 554 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~--dG~al~aLi 554 (677)
|++....|++-.++.|+ +.-.+++ .|. ||++||+|=
T Consensus 9 t~~~V~~WL~Wa~~ef~--L~~~~~~--~F~~m~Gk~LC~Ls 46 (75)
T cd08540 9 STDHVRQWLEWAVKEYG--LPDVDVL--LFQNIDGKELCKMT 46 (75)
T ss_pred CHHHHHHHHHHHHHHhC--CCCCCcc--cccCCCHHHHHhCC
Confidence 57889999999999997 4444554 563 899999963
No 121
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=57.51 E-value=13 Score=31.70 Aligned_cols=34 Identities=9% Similarity=0.167 Sum_probs=26.6
Q ss_pred hccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 15 QSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 15 ~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
..++|++++ .+.|+.+|. ++|+|+.+|+-.+|..
T Consensus 45 g~k~t~~ev---~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 45 GSKLQDAEI---AKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred CCCCCHHHH---HHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 345666655 455888899 9999999999988876
No 122
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=54.25 E-value=23 Score=35.79 Aligned_cols=59 Identities=20% Similarity=0.205 Sum_probs=49.7
Q ss_pred HHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHH
Q 005777 26 LKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRA 87 (677)
Q Consensus 26 l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~ 87 (677)
+++.=..+|. .+|.+|.+||...+.- +....+-.++..+|.-.|.+++..++.++.++.
T Consensus 283 kkEFeElIDsNhDGivTaeELe~y~dP---~n~~~alne~~~~ma~~d~n~~~~Ls~eell~r 342 (362)
T KOG4251|consen 283 KKEFEELIDSNHDGIVTAEELEDYVDP---QNFRLALNEVNDIMALTDANNDEKLSLEELLER 342 (362)
T ss_pred HHHHHHHhhcCCccceeHHHHHhhcCc---hhhhhhHHHHHHHHhhhccCCCcccCHHHHHHH
Confidence 4444456799 9999999999999876 677778889999999999999999999997764
No 123
>cd08541 SAM_PNT-FLI-1 Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator. SAM Pointed domain of FLI-1 (Friend Leukemia Integration) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The FLI-1 protein participates in regulation of cellular differentiation, proliferation, and survival. The Fli-1 gene was initially described in Friend virus-induced erythroleukemias as a site for virus integration. It is highly expressed in hematopoietic tissues and at lower level in lungs, heart, and ovaries. Fli-1 is a proto-oncogene implicated in Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.
Probab=53.76 E-value=16 Score=31.48 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHhhhcCCccccccCCCCCCC--cHHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANRTSQIESFKDKNLS--NGIFFLELL 554 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~--dG~al~aLi 554 (677)
+.+....|++-.++.|+ +.=-++. .|. ||++||+|=
T Consensus 21 t~~hV~~WL~Wa~~ef~--L~~vd~~--~F~~m~Gk~LC~Ls 58 (91)
T cd08541 21 TQEHVRQWLEWAIKEYG--LMEIDTS--FFQNMDGKELCKMN 58 (91)
T ss_pred CHHHHHHHHHHHHHHcC--CCCCChh--hccCCCHHHHHhCC
Confidence 57899999999999997 3333443 563 899999963
No 124
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=52.34 E-value=14 Score=31.74 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=24.2
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
.++.+.++.+|. ++|.|+.+|+..+|..
T Consensus 53 ~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 53 MLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 356777889999 9999999999999887
No 125
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=52.15 E-value=20 Score=42.80 Aligned_cols=71 Identities=21% Similarity=0.204 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhhhCCCCCcccccCCCCchhHHHHHhhcHHHHHHHHHHHcCCCccccc---ccccCCCChHHHHHHHHHH
Q 005777 124 EKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERA---INTKRVLNPWERNENHTLC 200 (677)
Q Consensus 124 q~~~~~~wIN~~L~~~~~~~~~~p~~~~~~dl~~dl~DGv~L~~Lie~l~~~~i~~~~---i~~~~~~~~~~~~eNv~~~ 200 (677)
-...++.|||.. ... -| .+-+.||.||++|..++..+-|...+... |+..+..+..-++.|+..+
T Consensus 8 l~~~Lv~Wv~tf-~~~------~~-----~~~~~dL~DGv~L~evL~qIDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l 75 (713)
T PF05622_consen 8 LCDSLVTWVQTF-NLS------AP-----CSSYEDLSDGVALAEVLHQIDPEYFNDSWLSRIKEDVGDNWRLRVSNLKKL 75 (713)
T ss_dssp HHHHHHHHHTT----S------S--------SHHHHTTSHHHHHHHHHH-TTTS-HHHHTT--SGGGG-SHHHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCC------CC-----cCCHHHccchHHHHHHHHHhCccccCcHHhhcCCCCCCccHHHHHHHHHHH
Confidence 456799999994 221 12 23478999999999999999998765332 2222112334488999988
Q ss_pred HHHHHH
Q 005777 201 LNSAKA 206 (677)
Q Consensus 201 L~~~k~ 206 (677)
++.++.
T Consensus 76 ~~~i~~ 81 (713)
T PF05622_consen 76 LRNIKS 81 (713)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887774
No 126
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=51.49 E-value=9.2 Score=32.82 Aligned_cols=27 Identities=15% Similarity=0.282 Sum_probs=23.9
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
++.+.|+.+|. ++|.|+.+|+..+|..
T Consensus 52 ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 52 AVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 46677888999 9999999999999887
No 127
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=51.44 E-value=15 Score=31.42 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=25.3
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
.++.+.|+.+|. ++|.|+.+|+-.+|.+
T Consensus 47 ~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 47 EGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 568888999999 9999999999998877
No 128
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=49.71 E-value=21 Score=30.54 Aligned_cols=28 Identities=11% Similarity=0.161 Sum_probs=23.7
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
.++.+.|+.+|. ++|.|+.+|+-.+|..
T Consensus 52 ~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 52 GVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 345667889999 9999999999988876
No 129
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=49.20 E-value=31 Score=38.41 Aligned_cols=108 Identities=17% Similarity=0.139 Sum_probs=66.1
Q ss_pred hhhhccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHh-hcCCCCCcccHHHHHHHHH
Q 005777 12 PWLQSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGE-SHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 12 ~~~~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~-~d~d~~g~I~f~eF~~~~~ 89 (677)
+.+...-.++|++.+--.|...++ +.-+.+.+|+-.-.-.| ++++-..+++..++.. .|.-.||-|+|+||...=.
T Consensus 24 v~~lkra~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL--~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~ 101 (694)
T KOG0751|consen 24 VELLKRADPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGL--YNESNFNDKIVRLLASIADQTKDGLISFQEFRAFES 101 (694)
T ss_pred HHhhccCChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhh--cccccCChHHHHHHHhhhhhcccccccHHHHHHHHh
Confidence 333333344555555555566677 77889999987766553 6776666777777755 4667899999999987544
Q ss_pred HHHhhhhhhcCCCCCCcchhhhhhccccccCCHHHHHHH
Q 005777 90 NLQARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASY 128 (677)
Q Consensus 90 ~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~q~~~~ 128 (677)
-+...+. . -.++|-.|++.+.+. ++-+.-+..
T Consensus 102 ~lC~pDa-l--~~~aFqlFDr~~~~~----vs~~~~~~i 133 (694)
T KOG0751|consen 102 VLCAPDA-L--FEVAFQLFDRLGNGE----VSFEDVADI 133 (694)
T ss_pred hccCchH-H--HHHHHHHhcccCCCc----eehHHHHHH
Confidence 3333211 0 024556666666666 554444443
No 130
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=48.84 E-value=30 Score=40.64 Aligned_cols=71 Identities=14% Similarity=0.284 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhh
Q 005777 21 VELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQAR 94 (677)
Q Consensus 21 ~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~ 94 (677)
....-+...|+..|+ ++|.++..+...+++. +...+.+..+..++++.+...++++..++|.+....+..+
T Consensus 133 ~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~---~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~r 204 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKNKNGHMSFDEVLDLLKQ---LNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKR 204 (746)
T ss_pred hHHHHHHHHHHHHccccccccchhhHHHHHHH---HHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccC
Confidence 344558889999999 9999999999999998 7888888889999999988899999999999998776544
No 131
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=48.68 E-value=26 Score=36.98 Aligned_cols=65 Identities=9% Similarity=-0.047 Sum_probs=52.7
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
+.+...|.+||. ++|.++..|.-..+.-+ .|-..|.+-|+--++.++.+.||.+.=++|--+++-
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavl--c~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~ 324 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVL--CGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQV 324 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheee--eCCCCcHHHHHHHHHhcccccccccchHHHHHHHHH
Confidence 568899999999 99999888877666652 466788888888899999999999988877666543
No 132
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=46.40 E-value=21 Score=27.71 Aligned_cols=27 Identities=7% Similarity=0.147 Sum_probs=23.2
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
++.+.|..+|. ++|+|+.+|+..++..
T Consensus 34 ~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 34 VLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred HHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 46777999999 9999999999888865
No 133
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=45.98 E-value=29 Score=26.43 Aligned_cols=27 Identities=19% Similarity=0.362 Sum_probs=23.0
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
.....|+..|+ ++|++..+|+...++.
T Consensus 22 yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 22 YARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp HHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 46778999999 9999999999998876
No 134
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=45.96 E-value=21 Score=30.33 Aligned_cols=28 Identities=18% Similarity=0.362 Sum_probs=24.1
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
.++...|+.+|. ++|.|+.+|+..+|..
T Consensus 51 ~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 51 KAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 456778889999 9999999999988876
No 135
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=45.93 E-value=34 Score=29.34 Aligned_cols=29 Identities=14% Similarity=0.084 Sum_probs=24.7
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 62 DEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 62 ~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
+++.+++..+|.|++|.|+++++..++..
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~ 38 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLK 38 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 35667788899999999999999999864
No 136
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=43.67 E-value=30 Score=27.68 Aligned_cols=34 Identities=12% Similarity=0.202 Sum_probs=30.3
Q ss_pred CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhc
Q 005777 36 QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESH 72 (677)
Q Consensus 36 ~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d 72 (677)
.+--|+.+-++.++.. +|.++++.+++++++.+.
T Consensus 28 ~NPpine~mir~M~~Q---MG~kpSekqi~Q~m~~mk 61 (64)
T PF03672_consen 28 ENPPINEKMIRAMMMQ---MGRKPSEKQIKQMMRSMK 61 (64)
T ss_pred HCCCCCHHHHHHHHHH---hCCCccHHHHHHHHHHHH
Confidence 4568999999999999 999999999999998763
No 137
>PRK00523 hypothetical protein; Provisional
Probab=41.53 E-value=45 Score=27.27 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=30.8
Q ss_pred CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhc
Q 005777 36 QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESH 72 (677)
Q Consensus 36 ~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d 72 (677)
.+=.|+.+-++.+|.. +|.++++.+++++++.+.
T Consensus 36 ~NPpine~mir~M~~Q---MGqKPSekki~Q~m~~mk 69 (72)
T PRK00523 36 ENPPITENMIRAMYMQ---MGRKPSESQIKQVMRSVK 69 (72)
T ss_pred HCcCCCHHHHHHHHHH---hCCCccHHHHHHHHHHHH
Confidence 5678999999999999 999999999999998863
No 138
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=41.43 E-value=26 Score=29.77 Aligned_cols=27 Identities=15% Similarity=0.192 Sum_probs=23.7
Q ss_pred HHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 25 TLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 25 ~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
++++.|+.+|. ++|.|+.+++..++..
T Consensus 53 ~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 53 AVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46777889999 9999999999998876
No 139
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=39.99 E-value=47 Score=28.26 Aligned_cols=28 Identities=4% Similarity=0.020 Sum_probs=24.3
Q ss_pred HHHHHHHhhc-CCCCC-cccHHHHHHHHHH
Q 005777 63 EIKAIMGESH-TNMED-EVDFESYLRAYLN 90 (677)
Q Consensus 63 ei~~~l~~~d-~d~~g-~I~f~eF~~~~~~ 90 (677)
++.+.++.+| .|++| .|+.+||..+|..
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~ 38 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINN 38 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHH
Confidence 4778888997 79999 5999999999965
No 140
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=39.26 E-value=68 Score=24.30 Aligned_cols=45 Identities=18% Similarity=0.299 Sum_probs=37.3
Q ss_pred ccCCHHHHHHHHHHhhhhcCCCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHH
Q 005777 16 SQFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMG 69 (677)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~ 69 (677)
..||.+++..|.+.|.. +.+++..+...+... +| ++...|...+.
T Consensus 5 ~~~t~~q~~~L~~~f~~----~~~p~~~~~~~la~~---l~--l~~~~V~~WF~ 49 (57)
T PF00046_consen 5 TRFTKEQLKVLEEYFQE----NPYPSKEEREELAKE---LG--LTERQVKNWFQ 49 (57)
T ss_dssp SSSSHHHHHHHHHHHHH----SSSCHHHHHHHHHHH---HT--SSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH----hcccccccccccccc---cc--ccccccccCHH
Confidence 36899999999999995 578999999988888 76 77788877664
No 141
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=38.99 E-value=40 Score=28.20 Aligned_cols=29 Identities=7% Similarity=0.047 Sum_probs=25.2
Q ss_pred HHHHHHHHhhcC--CCCCcccHHHHHHHHHH
Q 005777 62 DEIKAIMGESHT--NMEDEVDFESYLRAYLN 90 (677)
Q Consensus 62 ~ei~~~l~~~d~--d~~g~I~f~eF~~~~~~ 90 (677)
+++.+++..+|. |++|.|++++|..++..
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~ 38 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLET 38 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHH
Confidence 457778899999 89999999999999865
No 142
>cd00086 homeodomain Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Probab=38.44 E-value=94 Score=23.40 Aligned_cols=46 Identities=17% Similarity=0.280 Sum_probs=38.6
Q ss_pred ccCCHHHHHHHHHHhhhhcCCCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHh
Q 005777 16 SQFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGE 70 (677)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~ 70 (677)
..++.+++..|.+.|.. +.+.+..++..+... +| ++..+|...+..
T Consensus 5 ~~~~~~~~~~Le~~f~~----~~~P~~~~~~~la~~---~~--l~~~qV~~WF~n 50 (59)
T cd00086 5 TRFTPEQLEELEKEFEK----NPYPSREEREELAKE---LG--LTERQVKIWFQN 50 (59)
T ss_pred CcCCHHHHHHHHHHHHh----CCCCCHHHHHHHHHH---HC--cCHHHHHHHHHH
Confidence 46789999999999997 579999999999888 77 788888887754
No 143
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=38.08 E-value=86 Score=36.97 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=52.8
Q ss_pred cCCHHHHHHHHHHhhhhcCCCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 17 QFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
..|.+|-....+.|..+-.+.|+||-+.-+..|-. -| ++.--+.++-.-.|.|.||.+|..||--+|.
T Consensus 9 avT~~Er~K~~~qF~~Lkp~~gfitg~qArnfflq---S~--LP~~VLaqIWALsDldkDGrmdi~EfSIAmk 76 (1118)
T KOG1029|consen 9 AVTDEERQKHDAQFGQLKPGQGFITGDQARNFFLQ---SG--LPTPVLAQIWALSDLDKDGRMDIREFSIAMK 76 (1118)
T ss_pred ccchHHHHHHHHHHhccCCCCCccchHhhhhhHHh---cC--CChHHHHHHHHhhhcCccccchHHHHHHHHH
Confidence 45777766666666666558999999999998865 34 5555677788888999999999999977663
No 144
>cd08531 SAM_PNT-ERG_FLI-1 Sterile alpha motif (SAM)/Pointed domain of ERG (Ets related gene) and FLI-1 (Friend leukemia integration 1) transcription factors. SAM Pointed domain of ERG/FLI-1 subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The ERG and FLI regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. They are proto-oncogenes implicated in cancer development such as myeloid leukemia, Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.
Probab=37.83 E-value=41 Score=27.84 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHhhhcCC-ccccccCCCCCCCcHHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANR-TSQIESFKDKNLSNGIFFLELL 554 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~-~~~i~~f~d~s~~dG~al~aLi 554 (677)
|.+....|++-.++.|+- .+.+.+|. =-||++||+|=
T Consensus 9 t~~~V~~WL~Wa~~ef~L~~i~~~~F~---~m~Gk~LC~lt 46 (75)
T cd08531 9 TREHVRQWLEWAVKEYGLQDVDVSRFQ---NIDGKELCKMT 46 (75)
T ss_pred CHHHHHHHHHHHHHHcCCCCCChhhcc---CCChHHHHcCC
Confidence 578899999999999973 34444552 24799999863
No 145
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=37.48 E-value=41 Score=27.78 Aligned_cols=58 Identities=14% Similarity=0.247 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHhhhhcCCCCceehhhHHHHHHhh--------hhcCCCCcHHHHHHHHHhhcCCCCCcccHHHH
Q 005777 18 FTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKL--------KAFSEMFKEDEIKAIMGESHTNMEDEVDFESY 84 (677)
Q Consensus 18 ~t~~e~~~l~~~F~~~D~~~G~I~~~eL~~~l~~~--------~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF 84 (677)
.+.++....-.+|...= ..|++..+|+..++..+ +.+| .+..++++++.+ |.|+.++|
T Consensus 10 ~s~e~~~~~~~ql~Q~~-~~Gkv~~ee~n~~~e~~p~~~~~lAk~~G--~t~~~l~~~~~~------Gkit~~~~ 75 (75)
T TIGR02675 10 ASAEEADGALIQLSQML-ASGKLRGEEINSLLEALPGALQALAKAMG--VTRGELRKMLSD------GKLTADVI 75 (75)
T ss_pred CCHHHHHHHHHHHHHHH-HcCcccHHHHHHHHHHhHHHHHHHHHHhC--CCHHHHHHHHHC------CCCccccC
Confidence 34455444444433211 78999999999888652 2333 566677777653 56665544
No 146
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=37.11 E-value=31 Score=42.02 Aligned_cols=73 Identities=10% Similarity=0.208 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhh
Q 005777 17 QFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQAR 94 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~ 94 (677)
..+..+...+.++|...|. .+|+|+..+....|.. .| ++...+..+-...+.++.|.+++.+|.-.|..+...
T Consensus 276 ~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~---~g--l~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~~ 349 (847)
T KOG0998|consen 276 KVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLP---FG--LSKPRLAHVWLLADTQNTGTLSKDEFALAMHLLEQK 349 (847)
T ss_pred ccChHHHHHHHHHHHhccccCCCccccccccccccc---CC--CChhhhhhhhhhcchhccCcccccccchhhhhhhhh
Confidence 4567788889999999999 9999999999999976 55 667788888888999999999999998877665554
No 147
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=36.23 E-value=38 Score=33.37 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=29.6
Q ss_pred CcHHHH---HHHHHhhcCCCCCcccHHHHHHHHHHHHhh
Q 005777 59 FKEDEI---KAIMGESHTNMEDEVDFESYLRAYLNLQAR 94 (677)
Q Consensus 59 ~t~~ei---~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~ 94 (677)
++..+| ..|++.+|.|.||.|++.|...+|.+|-..
T Consensus 93 FsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgap 131 (244)
T KOG0041|consen 93 FSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAP 131 (244)
T ss_pred HHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCc
Confidence 444555 568899999999999999999999988543
No 148
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=35.80 E-value=46 Score=36.71 Aligned_cols=32 Identities=9% Similarity=-0.034 Sum_probs=28.4
Q ss_pred cCCCCcHHHHHHHHHhhcCCCCCcccHHHHHH
Q 005777 55 FSEMFKEDEIKAIMGESHTNMEDEVDFESYLR 86 (677)
Q Consensus 55 lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~ 86 (677)
.|......++..+++.+|.|+||.|+++||+.
T Consensus 327 ~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~ 358 (391)
T PRK12309 327 EGGEAFTHAAQEIFRLYDLDGDGFITREEWLG 358 (391)
T ss_pred hccChhhHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 46677788999999999999999999999963
No 149
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.01 E-value=76 Score=25.81 Aligned_cols=34 Identities=12% Similarity=0.160 Sum_probs=30.4
Q ss_pred CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhc
Q 005777 36 QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESH 72 (677)
Q Consensus 36 ~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d 72 (677)
++=.|+.+-++-+|.. +|.++++..|+++++.+.
T Consensus 35 ~NPpine~~iR~M~~q---mGqKpSe~kI~Qvm~~i~ 68 (71)
T COG3763 35 DNPPINEEMIRMMMAQ---MGQKPSEKKINQVMRSII 68 (71)
T ss_pred hCCCCCHHHHHHHHHH---hCCCchHHHHHHHHHHHH
Confidence 5678999999999999 999999999999998764
No 150
>PRK01844 hypothetical protein; Provisional
Probab=33.43 E-value=68 Score=26.28 Aligned_cols=34 Identities=9% Similarity=0.173 Sum_probs=30.5
Q ss_pred CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhc
Q 005777 36 QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESH 72 (677)
Q Consensus 36 ~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d 72 (677)
++=.|+.+-++.+|.. +|.++++.+++++++.+.
T Consensus 35 ~NPpine~mir~Mm~Q---MGqkPSekki~Q~m~~mk 68 (72)
T PRK01844 35 KNPPINEQMLKMMMMQ---MGQKPSQKKINQMMSAMN 68 (72)
T ss_pred HCCCCCHHHHHHHHHH---hCCCccHHHHHHHHHHHH
Confidence 5568999999999999 999999999999998863
No 151
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=33.23 E-value=2.6e+02 Score=24.06 Aligned_cols=65 Identities=12% Similarity=0.196 Sum_probs=43.3
Q ss_pred HHHHHHhhhhcCCCCceehhhHHHHHHhh----hhcCCCC----cHHHHHHHHHhhcCCCCCcccHHHHHHHHHH
Q 005777 24 RTLKSKFISTRSQSGRVTVGDLPPLFAKL----KAFSEMF----KEDEIKAIMGESHTNMEDEVDFESYLRAYLN 90 (677)
Q Consensus 24 ~~l~~~F~~~D~~~G~I~~~eL~~~l~~~----~~lg~~~----t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~ 90 (677)
++++-.|+.+...+|.++...|...|+.+ +++|+.. .+.-++..+.... ....|+-++|+.-|..
T Consensus 3 dKyRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~--~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 3 DKYRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ--LSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT--T-S-B-HHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC--CCCccCHHHHHHHHHh
Confidence 57889999995589999999988887765 4456532 5677777877752 4567999999997754
No 152
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=32.58 E-value=43 Score=38.32 Aligned_cols=70 Identities=14% Similarity=0.183 Sum_probs=52.6
Q ss_pred cchhhhccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCC----cHHHHHHHHHhhcCCCCCcccHHHH
Q 005777 10 SDPWLQSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMF----KEDEIKAIMGESHTNMEDEVDFESY 84 (677)
Q Consensus 10 ~~~~~~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~----t~~ei~~~l~~~d~d~~g~I~f~eF 84 (677)
.+|--.-+++..-.+-|...|..||. +||-++..||..++.. .+..+ ...+.-. .+..|.++|.-|
T Consensus 301 ~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~---~P~~pW~~~~~~~~t~------~~~~G~ltl~g~ 371 (625)
T KOG1707|consen 301 VPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFST---APGSPWTSSPYKDSTV------KNERGWLTLNGF 371 (625)
T ss_pred CCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhh---CCCCCCCCCcccccce------ecccceeehhhH
Confidence 34444557788889999999999999 9999999999999998 66544 2222211 125789999999
Q ss_pred HHHH
Q 005777 85 LRAY 88 (677)
Q Consensus 85 ~~~~ 88 (677)
+..-
T Consensus 372 l~~W 375 (625)
T KOG1707|consen 372 LSQW 375 (625)
T ss_pred HHHH
Confidence 8754
No 153
>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain.
Probab=31.55 E-value=55 Score=28.07 Aligned_cols=62 Identities=19% Similarity=0.229 Sum_probs=36.5
Q ss_pred CCCCcHHHHHHHHhhhCCCc-eeccccCCCCChHhHHhhHHHHHHHH--HHcCCC--CcCCccccccCC
Q 005777 542 KNLSNGIFFLELLSAVEPRV-VNWSLVTKGETEEDKKLNATYIISVA--RKLGCS--IFLLPEDIMEVN 605 (677)
Q Consensus 542 ~s~~dG~al~aLi~~~~P~~-i~~~~~~~~~~~~~~~~n~~~a~~~A--~~lGi~--~~l~~eDi~~~d 605 (677)
+-++-|..||+|.+++.|+. +..+.... ++....+.+-+=|-+| .+||+| .+.+..|+...|
T Consensus 8 ~~fr~G~PLc~lfNal~p~~~L~v~~~~~--~~~k~~K~ai~~Fi~ack~~L~~~~~e~FtIsdl~~~d 74 (89)
T PF06395_consen 8 KLFRQGYPLCVLFNALQPEEPLPVDPVSS--DDLKVCKKAIYKFIQACKQELGFPDEELFTISDLYGDD 74 (89)
T ss_pred HHHhCcCcHHHHHHccCCccCCCCCCCCc--chHHHHHHHHHHHHHHHHHhcCCCccceeeeeccccCC
Confidence 35788999999999999963 44322221 1122223333444444 369987 456666666544
No 154
>cd08536 SAM_PNT-Mae Sterile alpha motif (SAM)/Pointed domain of Mae protein homolog. Mae (Modulator of the Activity of ETS) subfamily represents a group of SAM Pointed monodomain proteins. SAM Pointed domain is a protein-protein interaction domain. It can interact with other SAM pointed domains forming head-to-tail heterodimers and also provides a kinase docking site. For example, in Drosophila Mae is required for facilitating phosphorylation of the Yan factor and for blocking phosphorylation of the ETS-2 regulator. Mae interacts with the SAM Pointed domains of Yan and ETS-2. Binding enhances access of the kinase to the Yan phosphorylation site by providing a kinase docking site, or inhibits phosphorylation of ETS-2 by blocking its docking site. This type of factors participates in regulation of kinase signaling particularly during embryogenesis.
Probab=31.52 E-value=65 Score=25.95 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHhhhcCC-ccccccCCCCCCCcHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANR-TSQIESFKDKNLSNGIFFLEL 553 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~-~~~i~~f~d~s~~dG~al~aL 553 (677)
|.+....|++..++.|+- .+.+.+|. -||++||.|
T Consensus 6 s~~~V~~WL~w~~~ef~L~~~~~~~F~----m~Gk~LC~l 41 (66)
T cd08536 6 SREHVRTWLRWVSARYQLEVVDLDKFL----MNGKGLCLM 41 (66)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCccccC----CCHHHHHcC
Confidence 467889999999999984 23445554 389999986
No 155
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=31.10 E-value=37 Score=30.45 Aligned_cols=36 Identities=11% Similarity=0.404 Sum_probs=24.2
Q ss_pred CCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHh
Q 005777 58 MFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 58 ~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~ 93 (677)
-+|+++++.+=.++-.|..|.+.|-||+.-+..-+.
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~e~~ 38 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFSSEKA 38 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT-----
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcccccc
Confidence 478999999999999999999999999998864433
No 156
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=30.57 E-value=69 Score=29.97 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=34.9
Q ss_pred cCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHhhhhhhcCCCCCCcchhhhhhcc
Q 005777 55 FSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQARAAAKSGGSKNSSSFLKAATTT 115 (677)
Q Consensus 55 lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~ 115 (677)
+.+++-.+-| ...+..|+.|.++|++|+.++.-........-....+++-++=.+..-
T Consensus 67 Lkenpfk~ri---~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~ 124 (189)
T KOG0038|consen 67 LKENPFKRRI---CEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEF 124 (189)
T ss_pred hhcChHHHHH---HHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCc
Confidence 4444444444 444566899999999999998766554444333344555444443333
No 157
>cd08535 SAM_PNT-Tel_Yan Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein. SAM Pointed domain of Tel (Translocation, Ets, Leukemia)/Yan subfamily of ETS transcriptional repressors is a protein-protein interaction domain. SAM Pointed domains of this type of regulators can interact with each other, forming head-to-tail homodimers or homooligomers, and/or interact with SAM Pointed domains of another subfamily of ETS factors forming heterodimers. The oligomeric form is able to block transcription of target genesand is involved in MAPK signaling. They participate in regulation of different processes during embryo development including hematopoietic differentiation and eye development. Tel/Yan transcriptional factors are frequent targets of chromosomal translocations resulting in fusions of SAM domain with new neighboring genes. Such chimeric proteins were found in different tumors. Members of this subfamily are potential targets for cancer therapy.
Probab=30.35 E-value=66 Score=26.12 Aligned_cols=36 Identities=19% Similarity=0.321 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHhhhcCC-ccccccCCCCCCCcHHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANR-TSQIESFKDKNLSNGIFFLELL 554 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~-~~~i~~f~d~s~~dG~al~aLi 554 (677)
|.+....|++-.++.|+- .+.+.+|. -||++||+|=
T Consensus 7 t~~~V~~WL~wa~~ef~L~~i~~~~F~----mnGk~LC~ls 43 (68)
T cd08535 7 SRDDVLQWLRWAENEFSLPPIDSNTFE----MNGKALCLLT 43 (68)
T ss_pred CHHHHHHHHHHHHHhcCCCCCChhccC----CCHHHHhcCC
Confidence 568888999988999973 34445554 4899999863
No 158
>cd08757 SAM_PNT_ESE Sterile alpha motif (SAM)/Pointed domain of ESE-like ETS transcriptional regulators. SAM Pointed domain of ESE-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. ETS factors are important for cell differentiation. They can be involved in regulation of gene expression in different types of epithelial cells. They are expressed in salivary gland, intestine, stomach, pancreas, lungs, kidneys, colon, mammary gland, and prostate. Members of this group are proto-oncogenes. Expression profiles of these factors are altered in epithelial cancers, which makes them potential targets for cancer therapy.
Probab=29.63 E-value=71 Score=25.83 Aligned_cols=35 Identities=17% Similarity=0.396 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHhhhcCCc---cccccCCCCCCCcHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANRT---SQIESFKDKNLSNGIFFLEL 553 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~~---~~i~~f~d~s~~dG~al~aL 553 (677)
|.+..+.|++..++.|+-. +.+.+|. -||++||.+
T Consensus 6 t~~~V~~Wl~w~~~e~~l~~~~i~~~~F~----m~Gk~LC~m 43 (68)
T cd08757 6 TKNDVLEWLQFVAEQNKLDAECISFQKFN----IDGQTLCSM 43 (68)
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCCccccC----CCHHHHHcC
Confidence 4678999999999887632 2344553 479999985
No 159
>PF07499 RuvA_C: RuvA, C-terminal domain; InterPro: IPR011114 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. The domain represents the C-terminal domain III of RuvA. This domain plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB []. Within the Holliday junction, this domain makes no interaction with the DNA.; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination, 0009379 Holliday junction helicase complex; PDB: 1HJP_A 1CUK_A 1C7Y_A 1IXS_A 1IXR_B 1BVS_E 2ZTC_A 2ZTD_B 2H5X_A.
Probab=29.03 E-value=1e+02 Score=22.76 Aligned_cols=40 Identities=13% Similarity=0.233 Sum_probs=27.7
Q ss_pred hhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 005777 43 GDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYL 89 (677)
Q Consensus 43 ~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~ 89 (677)
+|...+|.. +| ++..|+...++.+.. ...++.++.++...
T Consensus 4 ~d~~~AL~~---LG--y~~~e~~~av~~~~~--~~~~~~e~~ik~aL 43 (47)
T PF07499_consen 4 EDALEALIS---LG--YSKAEAQKAVSKLLE--KPGMDVEELIKQAL 43 (47)
T ss_dssp HHHHHHHHH---TT--S-HHHHHHHHHHHHH--STTS-HHHHHHHHH
T ss_pred HHHHHHHHH---cC--CCHHHHHHHHHHhhc--CCCCCHHHHHHHHH
Confidence 466677776 88 778899999998875 44567788776543
No 160
>cd08533 SAM_PNT-ETS-1,2 Sterile alpha motif (SAM)/Pointed domain of ETS-1,2 family. SAM Pointed domain of ETS-1,2 family of transcriptional activators is a protein-protein interaction domain. It carries a kinase docking site and mediates interaction between ETS transcriptional activators and protein kinases. This group of transcriptional factors is involved in the Ras/MAP kinase signaling pathway. MAP kinases phosphorylate the transcription factors. Phosphorylated factors then recruit coactivators and enhance transactivation. Members of this group play a role in regulation of different embryonic developmental processes. ETS-1,2 transcriptional activators are proto-oncogenes involved in malignant transformation and tumor progression. They are potential molecular targets for selective cancer therapy.
Probab=28.57 E-value=81 Score=25.85 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHhhhcCC-ccccccCCCCCCCcHHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANR-TSQIESFKDKNLSNGIFFLELL 554 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~-~~~i~~f~d~s~~dG~al~aLi 554 (677)
|.+....|++-.++.|+- .+.+.+|. -||++||+|=
T Consensus 8 t~~~V~~WL~Wa~~ef~L~~v~~~~F~----m~Gk~LC~ls 44 (71)
T cd08533 8 TETHVRQWLLWAVNEFSLEGVNFQKFC----MSGRDLCALG 44 (71)
T ss_pred CHHHHHHHHHHHHHHcCCCCCCcccCC----CCHHHHHcCC
Confidence 567888999988999873 45555554 4799999963
No 161
>cd08203 SAM_PNT Sterile alpha motif (SAM)/Pointed domain. Sterile alpha motif (SAM)/Pointed domain is found in about 40% of transcriptional regulators of ETS family (initially named for Erythroblastosis virus, E26-E Twenty Six). SAM Pointed domain containing proteins of this family additionally have C-terminal ETS DNA-binding domain. In a few cases, SAM Pointed domain appears as a single domain protein. Members of this group are mostly involved in regulation of embryonic development and growth control in eukaryotes. SAM Pointed domains mediate protein-protein interactions. Depending on the subgroup, they can interact with other SAM Pointed domains forming homo or hetero dimers/oligomers and/or they can recruit a protein kinase to its target which can be the SAM Pointed domain containing protein itself or another protein that has no kinase docking site. Thus, SAM Pointed domains participate in transcriptional regulation and signal transduction. Some genes coding ETS family transcripti
Probab=27.50 E-value=80 Score=25.32 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHhhhcCC-ccccccCCCCCCCcHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANR-TSQIESFKDKNLSNGIFFLEL 553 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~-~~~i~~f~d~s~~dG~al~aL 553 (677)
|.+....|++..++.|+- .+.+.+|. -||..||.+
T Consensus 6 t~~~V~~Wl~w~~~~f~L~~~~~~~F~----m~G~~Lc~l 41 (66)
T cd08203 6 TKEHVLQWLEWAVKEFSLPPIDFSKFN----MNGKELCLL 41 (66)
T ss_pred CHHHHHHHHHHHHHhcCCCCCChhhcC----CCHHHHHhC
Confidence 467899999999999973 22445554 479999985
No 162
>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain.
Probab=25.70 E-value=1.6e+02 Score=25.29 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=45.9
Q ss_pred hhHHHHHhhcHHHHHHHHHHHcCCC-cccccccccCCCChHHHHHHHHHHHHHHHH-cCceeec-cCCcccccCc
Q 005777 152 TNALFDLAKDGVLLCKLINVAVPGT-IDERAINTKRVLNPWERNENHTLCLNSAKA-IGCTVVN-IGTQDLVEGR 223 (677)
Q Consensus 152 ~~dl~~dl~DGv~L~~Lie~l~~~~-i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~-~G~~~~~-i~~~di~~g~ 223 (677)
+..|-+-|+-|.-||.|.|.+.|+. ++ ++.........+-..+-.++.+|+. .|+.-.+ +...|++..+
T Consensus 3 Vt~LW~~fr~G~PLc~lfNal~p~~~L~---v~~~~~~~~k~~K~ai~~Fi~ack~~L~~~~~e~FtIsdl~~~d 74 (89)
T PF06395_consen 3 VTQLWKLFRQGYPLCVLFNALQPEEPLP---VDPVSSDDLKVCKKAIYKFIQACKQELGFPDEELFTISDLYGDD 74 (89)
T ss_pred HHHHHHHHhCcCcHHHHHHccCCccCCC---CCCCCcchHHHHHHHHHHHHHHHHHhcCCCccceeeeeccccCC
Confidence 5778899999999999999999863 32 2112122234555677778888875 5654333 5666776655
No 163
>smart00251 SAM_PNT SAM / Pointed domain. A subfamily of the SAM domain
Probab=24.44 E-value=98 Score=26.03 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHhhhcCCccccccCCCCCCCcHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLEL 553 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aL 553 (677)
|.+....|++..++.|+ +.-.+|. .-=-||++||.|
T Consensus 21 t~~~V~~Wl~w~~~ef~--L~~~~~~-~f~m~G~~Lc~l 56 (82)
T smart00251 21 TEDHVLEWLEWAVKEFS--LSPIDFS-KFDMSGKELCSM 56 (82)
T ss_pred CHHHHHHHHHHHHHhcC--CCCCCcc-cCCCCHHHHHcC
Confidence 67899999999999997 3333343 112479999985
No 164
>TIGR01565 homeo_ZF_HD homeobox domain, ZF-HD class. This model represents a class of homoebox domain that differs substantially from the typical homoebox domain described in pfam model pfam00046. It is found in both C4 and C3 plants.
Probab=23.53 E-value=1.2e+02 Score=23.78 Aligned_cols=41 Identities=10% Similarity=0.145 Sum_probs=31.8
Q ss_pred ccCCHHHHHHHHHHhhhhcCCCCc----eehhhHHHHHHhhhhcCCCCcHHHHH
Q 005777 16 SQFTQVELRTLKSKFISTRSQSGR----VTVGDLPPLFAKLKAFSEMFKEDEIK 65 (677)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~~~G~----I~~~eL~~~l~~~~~lg~~~t~~ei~ 65 (677)
..||.+|++.|.+.|... |+ .+..+...+... +| +++..++
T Consensus 6 T~Ft~~Q~~~Le~~fe~~----~y~~~~~~~~~r~~la~~---lg--l~~~vvK 50 (58)
T TIGR01565 6 TKFTAEQKEKMRDFAEKL----GWKLKDKRREEVREFCEE---IG--VTRKVFK 50 (58)
T ss_pred CCCCHHHHHHHHHHHHHc----CCCCCCCCHHHHHHHHHH---hC--CCHHHee
Confidence 468999999999999965 77 888888887777 66 5555443
No 165
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=23.31 E-value=52 Score=34.83 Aligned_cols=69 Identities=9% Similarity=0.074 Sum_probs=49.0
Q ss_pred HHHHHHHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHH
Q 005777 21 VELRTLKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNL 91 (677)
Q Consensus 21 ~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l 91 (677)
+|.+-..=.|..+|+ .++-|...|.+..=+-+ +...-...=.+.|.+-.|.|+|..|+|.|++..+..-
T Consensus 330 DeeRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l--~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~ 399 (421)
T KOG4578|consen 330 DEERVVHWYFNQLDKNSNNDIERREWKPFKRVL--LKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVE 399 (421)
T ss_pred ChhheeeeeeeeecccccCccchhhcchHHHHH--HhhccHHHHhhhcchhcccCCCceecHHHHhhhhccc
Confidence 344456667999999 99999999866543221 1122334445678888899999999999999877543
No 166
>smart00389 HOX Homeodomain. DNA-binding factors that are involved in the transcriptional regulation of key developmental processes
Probab=23.26 E-value=2.3e+02 Score=21.07 Aligned_cols=45 Identities=22% Similarity=0.310 Sum_probs=35.5
Q ss_pred cCCHHHHHHHHHHhhhhcCCCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHh
Q 005777 17 QFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGE 70 (677)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~ 70 (677)
.++++++..|...|..- -+.+.+++..+... +| ++..+|...+..
T Consensus 6 ~~~~~~~~~L~~~f~~~----~~P~~~~~~~la~~---~~--l~~~qV~~WF~n 50 (56)
T smart00389 6 SFTPEQLEELEKEFQKN----PYPSREEREELAAK---LG--LSERQVKVWFQN 50 (56)
T ss_pred cCCHHHHHHHHHHHHhC----CCCCHHHHHHHHHH---HC--cCHHHHHHhHHH
Confidence 47899999999998733 48889999988888 66 667788776654
No 167
>cd08532 SAM_PNT-PDEF-like Sterile alpha motif (SAM)/Pointed domain of prostate-derived ETS factor. SAM Pointed domain of PDEF-like (Prostate-Derived ETS Factor) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. In human males this activator is highly expressed in the prostate gland and enhances androgen-mediated activation of the PSA promoter though interaction with the DNA binding domain of androgen receptor. PDEF may play a role in prostate cancer development as well as in goblet cell formation and mucus production in the epithelial lining of respiratory and intestinal tracts.
Probab=23.01 E-value=98 Score=25.72 Aligned_cols=35 Identities=14% Similarity=0.222 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHhhhcCCccccccCCCCCCCcHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLEL 553 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~~~~i~~f~d~s~~dG~al~aL 553 (677)
|.+....|++-.++.|+-.-.+.+|. -||++||.|
T Consensus 14 s~~~V~~WL~w~~~ef~L~~~~~~F~----mnG~~LC~l 48 (76)
T cd08532 14 SPANVQKWLLWTEHQYRLPPPPRCFE----LNGKDLCAL 48 (76)
T ss_pred CHHHHHHHHHHHHHHhCCCCchhcCC----CCHHHHHcC
Confidence 67899999999999998322333443 489999985
No 168
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=22.56 E-value=99 Score=27.29 Aligned_cols=35 Identities=9% Similarity=0.142 Sum_probs=27.1
Q ss_pred hhccCCHHHHHHHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 14 LQSQFTQVELRTLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 14 ~~~~~t~~e~~~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
..++++.+. |.+++..-|. ++|+++.+|+.-+|+-
T Consensus 36 ~~S~L~~~~---L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 36 MKSGLPRDV---LAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp HHTTSSHHH---HHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred HHcCCCHHH---HHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 345666654 6677889999 9999999999998874
No 169
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=21.90 E-value=3.1e+02 Score=23.33 Aligned_cols=53 Identities=6% Similarity=0.045 Sum_probs=40.8
Q ss_pred CceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHh
Q 005777 38 GRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQA 93 (677)
Q Consensus 38 G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~~~~~l~~ 93 (677)
..||.+||.+.-+. .|.++|.++.+.++.-+..+.-.-.+=++=.+++..+..
T Consensus 13 n~iT~~eLlkyskq---y~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkeia~ 65 (85)
T PF11116_consen 13 NNITAKELLKYSKQ---YNISITKKQAEQIANILRGKNINIFNEQERKKLLKEIAK 65 (85)
T ss_pred hcCCHHHHHHHHHH---hCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 46889999999888 899999999888888877666556666666666666644
No 170
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=21.86 E-value=92 Score=26.84 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=24.1
Q ss_pred HHHHHHhhhhcC-CCCceehhhHHHHHHh
Q 005777 24 RTLKSKFISTRS-QSGRVTVGDLPPLFAK 51 (677)
Q Consensus 24 ~~l~~~F~~~D~-~~G~I~~~eL~~~l~~ 51 (677)
..+.++|+.+|. +||.|+..|+-.++..
T Consensus 48 ~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 48 MAVDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 346778999999 9999999999888776
No 171
>cd08542 SAM_PNT-ETS-1 Sterile alpha motif (SAM)/Pointed domain of ETS-1. SAM Pointed domain of ETS-1 subfamily of ETS transcriptional activators is a protein-protein interaction domain. The ETS-1 activator is regulated by phosphorylation. It contains a docking site for the ERK2 MAP (Mitogen Activated Protein) kinase, while the ERK2 phosphorylation site is located in the N-terminal disordered region upstream of the SAM Pointed domain. Mutations of the kinase docking site residues inhibit phosphorylation. ETS-1 activators play role in a number of different physiological processes, and they are expressed during embryonic development, including blood vessel formation, hematopoietic, lymphoid, neuronal and osteogenic differentiation. The Ets-1 gene is a proto-oncogene involved in progression of different tumors (including breast cancer, meningioma, and prostate cancer). Members of this subfamily are potential molecular targets for selective cancer therapy.
Probab=21.66 E-value=1.2e+02 Score=25.90 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHhhhcCC-ccccccCCCCCCCcHHHHHHHH
Q 005777 515 TDTDILNWANRKVKKANR-TSQIESFKDKNLSNGIFFLELL 554 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~-~~~i~~f~d~s~~dG~al~aLi 554 (677)
|++....|.+-.++.|+- .+.+.+|. -||++||+|=
T Consensus 23 t~~~V~~WL~Wa~~ef~L~~i~~~~F~----m~Gk~LC~Ls 59 (88)
T cd08542 23 TETHVRDWVMWAVNEFSLKGVDFQKFC----MNGAALCALG 59 (88)
T ss_pred CHHHHHHHHHHHHHHcCCCCCCcccCC----CCHHHHHcCC
Confidence 678899999999999973 34444443 4899999963
No 172
>PF14658 EF-hand_9: EF-hand domain
Probab=21.40 E-value=1.2e+02 Score=24.59 Aligned_cols=27 Identities=11% Similarity=0.182 Sum_probs=24.0
Q ss_pred HHHHHhhhhcC-CC-CceehhhHHHHHHh
Q 005777 25 TLKSKFISTRS-QS-GRVTVGDLPPLFAK 51 (677)
Q Consensus 25 ~l~~~F~~~D~-~~-G~I~~~eL~~~l~~ 51 (677)
+|++..+.+|. +. |.|+.+++..+|+.
T Consensus 36 ~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 36 ELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred HHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 67888899999 76 99999999999985
No 173
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=21.36 E-value=1.7e+02 Score=26.00 Aligned_cols=53 Identities=9% Similarity=0.276 Sum_probs=45.1
Q ss_pred HHHHhhhhcC-CCCceehhhHHHHHHhhhhcCCCCcHHHHHHHHHhhcCCCCCcccHHHHHH
Q 005777 26 LKSKFISTRS-QSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLR 86 (677)
Q Consensus 26 l~~~F~~~D~-~~G~I~~~eL~~~l~~~~~lg~~~t~~ei~~~l~~~d~d~~g~I~f~eF~~ 86 (677)
+..+|-+++. ++-.-+..|++.+|.+ .|.....+.++.+++++. |+ +.+|.+.
T Consensus 3 yvaAYLL~~lgGn~~psa~DikkIl~s---VG~E~d~e~i~~visel~----GK-~i~ElIA 56 (112)
T KOG3449|consen 3 YVAAYLLAVLGGNASPSASDIKKILES---VGAEIDDERINLVLSELK----GK-DIEELIA 56 (112)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHH---hCcccCHHHHHHHHHHhc----CC-CHHHHHH
Confidence 5678888999 8889999999999999 999999999999999984 33 6677654
No 174
>cd08537 SAM_PNT-ESE-1-like Sterile alpha motif (SAM)/Pointed domain of ESE-1 like ETS transcriptional regulators. SAM Pointed domain of ESE-1-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. SAM Pointed domain of ESE-1 provides a potential docking site for signaling kinase Pak1 in humans. ESE-1 factors are involved in regulation of gene expression in different types of epithelial cells. ESE-1 is expressed in many different organs including intestine, stomach, pancreas, lungs, kidneys, and prostate. The DNA binding consensus motif for ESE-1 consists of a purine-rich GGA[AT] core sequence. The expression profile of these factors is altered in epithelial cancers if compared to normal tissues. Members of this subfamily are potential targets for cancer therapy.
Probab=20.01 E-value=87 Score=26.11 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHhhh--cCC-ccccccCCCCCCCcHHHHHHH
Q 005777 515 TDTDILNWANRKVKK--ANR-TSQIESFKDKNLSNGIFFLEL 553 (677)
Q Consensus 515 ~~~~LL~W~~~~~~~--~~~-~~~i~~f~d~s~~dG~al~aL 553 (677)
++...+.|++..+.. |.- ++.+.+|. =||.+||.+
T Consensus 14 tk~qVleWL~~~~e~n~~dl~~v~f~~F~----MnG~~LC~l 51 (78)
T cd08537 14 TKTQVLEWISYHVEKNKYDASSIDFSRCD----MDGATLCNC 51 (78)
T ss_pred cHHHHHHHHHHHHHhccCCcccCCHHHhC----CchHHHHcc
Confidence 688999999999954 541 34444443 579999985
Done!