Query 005782
Match_columns 677
No_of_seqs 395 out of 2017
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 07:17:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005782.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005782hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 1E-125 4E-130 1110.8 49.0 554 50-669 3-832 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 1E-124 4E-129 1088.2 49.9 559 49-670 12-709 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 4E-123 1E-127 1081.0 45.3 558 51-675 2-717 (721)
4 1x38_A Beta-D-glucan exohydrol 100.0 5.9E-93 2E-97 812.3 35.4 438 41-533 4-601 (602)
5 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 9.4E-93 3.2E-97 821.6 33.0 431 48-538 21-619 (822)
6 3bmx_A Uncharacterized lipopro 100.0 6.6E-82 2.3E-86 725.3 23.9 419 46-535 28-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 1E-50 3.4E-55 451.0 20.1 338 79-474 82-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 8.4E-36 2.9E-40 317.3 10.6 173 78-269 70-336 (351)
9 4g6c_A Beta-hexosaminidase 1; 100.0 9.2E-31 3.1E-35 278.0 2.9 170 76-264 59-322 (348)
10 4gvf_A Beta-hexosaminidase; TI 100.0 1.2E-30 4.2E-35 276.8 0.3 170 80-264 54-314 (349)
11 2oxn_A Beta-hexosaminidase; TI 99.9 1.3E-29 4.6E-34 268.5 0.1 169 79-264 53-308 (340)
12 3idu_A Uncharacterized protein 97.0 0.0018 6.3E-08 58.4 8.2 62 574-658 32-94 (127)
13 2l0d_A Cell surface protein; s 96.3 0.014 4.7E-07 51.6 8.5 63 574-658 18-82 (114)
14 2kut_A Uncharacterized protein 95.2 0.028 9.5E-07 50.1 5.8 57 574-634 15-73 (122)
15 3isy_A Bsupi, intracellular pr 91.8 0.7 2.4E-05 40.9 8.8 69 574-658 17-99 (120)
16 4ep8_B Urease subunit beta; al 85.0 1.5 5.3E-05 36.9 5.7 51 577-631 20-82 (101)
17 1w8o_A Bacterial sialidase; 3D 84.0 2.4 8.4E-05 47.6 9.0 100 522-659 338-439 (601)
18 2x3c_A Toxic extracellular end 80.9 2.5 8.7E-05 44.3 7.0 63 575-639 36-116 (343)
19 4ubp_B Protein (urease (chain 80.7 2.6 9E-05 37.0 5.7 52 576-631 25-88 (126)
20 4ac7_B Urease subunit beta; hy 80.7 2.6 9E-05 37.0 5.7 52 576-631 25-88 (126)
21 1cuo_A Protein (azurin ISO-2); 79.6 3 0.0001 37.2 6.1 56 578-633 28-100 (129)
22 3fsa_A Azurin; copper, cupredo 78.1 5.3 0.00018 35.5 7.1 55 578-633 28-100 (125)
23 1yew_A Particulate methane mon 77.2 5.6 0.00019 41.4 7.8 57 574-634 263-336 (382)
24 2e6j_A Hydin protein; PAPD, st 75.9 3.9 0.00013 34.9 5.6 62 575-642 26-87 (112)
25 2ys4_A Hydrocephalus-inducing 75.8 3.7 0.00013 36.0 5.5 60 575-645 41-100 (122)
26 1nwp_A Azurin; electron transp 72.5 8.4 0.00029 34.3 7.0 65 578-643 28-113 (128)
27 3ay2_A Lipid modified azurin p 68.3 4.7 0.00016 37.7 4.5 24 619-643 125-151 (167)
28 2iaa_C Azurin; quinoprotein, t 68.3 12 0.0004 33.3 7.0 63 578-643 27-112 (128)
29 2ccw_A Azurin II, AZN-2; elect 66.5 13 0.00045 33.0 6.9 63 578-643 28-113 (129)
30 3qga_A UREA2, fusion of urease 61.8 9.2 0.00032 36.8 5.1 51 577-631 125-187 (225)
31 1e9y_A Urease subunit alpha; h 61.3 8.5 0.00029 37.4 4.8 51 578-632 126-188 (238)
32 3kmh_A D-lyxose isomerase; cup 55.2 11 0.00037 37.1 4.5 47 582-634 130-186 (246)
33 3rfr_A PMOB; membrane, oxidore 54.9 19 0.00064 37.9 6.4 55 574-634 297-368 (419)
34 2aan_A Auracyanin A; cupredoxi 51.3 36 0.0012 30.1 7.2 17 617-633 98-114 (139)
35 3hrz_B Cobra venom factor; ser 51.1 43 0.0015 33.1 8.4 59 574-634 95-154 (252)
36 2qsv_A Uncharacterized protein 50.7 31 0.0011 33.3 7.1 52 575-634 134-185 (220)
37 1xf1_A C5A peptidase, SCP; hyd 50.3 11 0.00038 44.9 4.5 59 575-634 499-564 (926)
38 2cal_A Rusticyanin; iron respi 46.4 49 0.0017 30.1 7.3 54 578-632 70-128 (154)
39 2qsv_A Uncharacterized protein 45.0 1.3E+02 0.0044 28.8 10.6 50 575-634 19-69 (220)
40 3qbt_B Inositol polyphosphate 44.1 56 0.0019 29.2 7.2 56 576-634 44-100 (140)
41 4hs4_A Chromate reductase; tri 42.8 43 0.0015 31.8 6.6 53 373-436 62-119 (199)
42 4fxk_B Complement C4-A alpha c 39.9 35 0.0012 39.5 6.5 57 574-634 167-224 (767)
43 3q48_A Chaperone CUPB2; IG fol 38.6 65 0.0022 32.0 7.4 54 578-633 45-102 (257)
44 2lv4_A Putative outer membrane 37.4 55 0.0019 28.7 5.6 65 608-673 48-134 (146)
45 4dzg_A PLIG; lysozyme inhibito 36.5 43 0.0015 28.9 5.0 16 646-661 77-95 (114)
46 3p0r_A Azoreductase; structura 36.1 56 0.0019 31.1 6.3 55 374-439 82-151 (211)
47 4ay0_A Chaperone protein CAF1M 34.8 79 0.0027 30.5 7.1 53 578-634 29-84 (218)
48 1iby_A Nitrosocyanin; RED copp 34.7 43 0.0015 28.2 4.7 40 578-633 47-86 (112)
49 2hpv_A FMN-dependent NADH-azor 34.5 61 0.0021 30.3 6.3 39 374-423 84-122 (208)
50 3lcm_A SMU.1420, putative oxid 33.6 58 0.002 30.6 5.9 54 374-438 63-131 (196)
51 4hci_A Cupredoxin 1; structura 33.5 67 0.0023 26.4 5.6 26 617-658 60-85 (100)
52 1qhq_A Protein (auracyanin); e 33.3 86 0.0029 27.5 6.7 26 618-659 98-123 (140)
53 3o0l_A Uncharacterized protein 33.1 2E+02 0.0067 24.6 8.6 59 574-634 37-96 (112)
54 1t5b_A Acyl carrier protein ph 32.2 70 0.0024 29.5 6.2 37 375-422 77-113 (201)
55 3u7i_A FMN-dependent NADH-azor 31.6 74 0.0025 30.7 6.4 38 375-423 85-122 (223)
56 3qis_A Inositol polyphosphate 30.8 1E+02 0.0035 32.2 7.8 57 575-634 46-103 (366)
57 4gy7_A Urease; JACK bean, hydr 29.8 52 0.0018 38.6 5.7 52 576-631 150-213 (840)
58 2x0j_A Malate dehydrogenase; o 29.5 14 0.00048 37.7 0.7 55 381-441 66-123 (294)
59 3szu_A ISPH, 4-hydroxy-3-methy 29.4 49 0.0017 34.2 4.7 140 300-473 152-296 (328)
60 3fvw_A Putative NAD(P)H-depend 28.3 99 0.0034 28.8 6.5 41 372-423 55-95 (192)
61 3svl_A Protein YIEF; E. coli C 27.0 1.1E+02 0.0038 28.6 6.6 40 373-423 61-100 (193)
62 3vta_A Cucumisin; subtilisin-l 26.5 2.9E+02 0.0098 30.9 11.0 79 575-672 537-618 (621)
63 1rtt_A Conserved hypothetical 26.2 70 0.0024 29.6 5.0 53 373-436 61-118 (193)
64 3k1y_A Oxidoreductase; structu 26.1 87 0.003 29.4 5.6 53 372-435 73-127 (191)
65 1rli_A Trp repressor binding p 25.7 92 0.0031 28.2 5.7 38 374-422 61-98 (184)
66 2hr0_B Complement C3 alpha' ch 24.8 1.1E+02 0.0037 36.2 7.4 59 574-634 94-154 (915)
67 4djm_A DRAB; chaperone, PILI; 24.6 1.4E+02 0.0047 29.3 6.9 52 578-633 39-91 (239)
68 3vku_A L-LDH, L-lactate dehydr 24.5 39 0.0013 34.9 3.0 56 381-441 73-130 (326)
69 1d4a_A DT-diaphorase, quinone 24.4 1.2E+02 0.0041 30.1 6.6 55 373-438 82-151 (273)
70 1g43_A Scaffolding protein; be 23.7 29 0.00098 32.0 1.6 34 613-647 97-132 (160)
71 4b9f_A Cellulosomal-scaffoldin 23.5 40 0.0014 30.8 2.5 35 613-648 94-128 (152)
72 3ha2_A NADPH-quinone reductase 23.0 1.3E+02 0.0044 27.9 6.1 56 373-439 40-105 (177)
73 5mdh_A Malate dehydrogenase; o 22.8 53 0.0018 34.0 3.6 58 380-441 75-134 (333)
74 3u7r_A NADPH-dependent FMN red 22.4 1.4E+02 0.0049 27.9 6.3 39 373-422 56-94 (190)
75 4acq_A Alpha-2-macroglobulin; 22.3 1.5E+02 0.0053 36.9 8.3 57 574-634 782-839 (1451)
76 2q3z_A Transglutaminase 2; tra 21.9 78 0.0027 36.0 4.9 59 574-634 486-548 (687)
77 3ldh_A Lactate dehydrogenase; 21.3 44 0.0015 34.6 2.6 56 382-442 87-144 (330)
78 1oju_A MDH, malate dehydrogena 21.1 24 0.00082 35.9 0.6 56 381-441 66-123 (294)
79 3r6w_A FMN-dependent NADH-azor 20.9 1.5E+02 0.0051 27.8 6.3 37 375-422 78-114 (212)
80 2co7_B SAFB chaperone, putativ 20.7 1.7E+02 0.0057 28.2 6.5 51 578-633 29-81 (221)
81 3prx_B Cobra venom factor; imm 20.7 1.8E+02 0.0062 36.8 8.4 62 574-638 827-889 (1642)
82 4h7p_A Malate dehydrogenase; s 20.4 32 0.0011 35.9 1.3 56 380-441 96-155 (345)
83 3tem_A Ribosyldihydronicotinam 20.0 1.7E+02 0.0058 28.1 6.5 55 373-438 81-150 (228)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=1.2e-125 Score=1110.80 Aligned_cols=554 Identities=28% Similarity=0.436 Sum_probs=475.5
Q ss_pred HHHHHHHHhccCHHHHHHHhcc----CCCCCCCCCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCH
Q 005782 50 PQRVNDLIGRLSLQEKVKLLIS----GAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNA 125 (677)
Q Consensus 50 ~~rv~~ll~~mTleEKv~ql~~----~~~~~~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~ 125 (677)
+.|+++||++||||||++||.+ .+.+++|+|||.+ +++|++||++ +.++.. ..++|.||+++++|||||+
T Consensus 3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~----~~~~~~-~~~~t~fP~~~~laat~d~ 76 (845)
T 3abz_A 3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIR----GTKFFD-GVPSGCFPNGTGLASTFDR 76 (845)
T ss_dssp CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCC----CSCSTT-CCCBCCCCCHHHHHHTCCH
T ss_pred HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCee----eeeccC-CCCcCcCcCHHHHHhcCCH
Confidence 3589999999999999999986 4678999999999 7899999986 233321 1248999999999999999
Q ss_pred HHHHHHhc------------------------------------------------------------------------
Q 005782 126 TLWEAIGR------------------------------------------------------------------------ 133 (677)
Q Consensus 126 ~l~~~~g~------------------------------------------------------------------------ 133 (677)
+|++++|+
T Consensus 77 ~l~~~~g~~~g~E~ra~Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~gV~a~~KHFpg~g~e~~ 156 (845)
T 3abz_A 77 DLLETAGKLMAKESIAKNAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGEGIAATVKHFVCNDLEDQ 156 (845)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHTTCBCEEEEETTCCCCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhCCeeEEeeccccCCcccC
Confidence 99999986
Q ss_pred -------cCHHHHhccCCHHHHHHHHcCCcceEEeeccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccc
Q 005782 134 -------VSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQ 206 (677)
Q Consensus 134 -------~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~ 206 (677)
+++++|+|+||+||+++|+++.+++||||||.+||+|||+|++||++|||+||||+|+|||||++|.
T Consensus 157 r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------ 230 (845)
T 3abz_A 157 RFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY------ 230 (845)
T ss_dssp TTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC------
T ss_pred CccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH------
Confidence 8999999999999999997444679999999999999999999999999999999999999998763
Q ss_pred cccCCHHHHHHHHHHhCCCCCCcc---chH-HHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhc----CCCCCCCCCCCC
Q 005782 207 HFTSTPEEAAADAIRAGLDLDCGP---FLG-LHTESAVQRGL-LSEIDINNALVNTLTVQMRLG----MFDGEPSSQPYG 277 (677)
Q Consensus 207 ~~~~~~~ea~~~al~AG~D~~~~~---~~~-~~l~~av~~g~-i~~~~id~av~RIL~~k~~~G----lf~~~p~~~~~~ 277 (677)
++++|++||+||+|+. ++. +.|.+||++|+ +++++||+||+|||++|+++| +|+. |. .
T Consensus 231 --------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~~-p~----~ 297 (845)
T 3abz_A 231 --------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTGI-VE----N 297 (845)
T ss_dssp --------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHCC-CT----T
T ss_pred --------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCccccccC-Cc----c
Confidence 2478999999999962 223 38999999999 999999999999999999999 8883 32 2
Q ss_pred CCCCCccCCHHHHHHHHHHhhcceEEeecCCCCCCCCCCCCCeEEEECcCCCccccccccccc-cCCccCCHHHHHhhce
Q 005782 278 HLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAG-IACGYTTPLQGIGRYA 356 (677)
Q Consensus 278 ~~~~~~v~~~~~~~la~~~A~~sivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~g~~~~-~~~~~~t~~~~l~~~~ 356 (677)
......+++++|+++|+++|++|||||||++++|||++ .+||+||||+|+....++|+|.. .+.+.+||++||+++.
T Consensus 298 ~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~ 375 (845)
T 3abz_A 298 GPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKL 375 (845)
T ss_dssp CCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCCBSCCCCHHHHHHHHH
T ss_pred CccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCcccCCcCCHHHHHHHhh
Confidence 11122377999999999999999999999999999986 47999999999998776666654 5778999999999874
Q ss_pred --eEEEecCcCcc------------------------------------C------------------------------
Q 005782 357 --RTIHQQGCKDV------------------------------------A------------------------------ 368 (677)
Q Consensus 357 --~v~y~~g~~~~------------------------------------~------------------------------ 368 (677)
.+.|..||... .
T Consensus 376 ~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (845)
T 3abz_A 376 GKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPK 455 (845)
T ss_dssp TSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTT
T ss_pred cCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccceeeccccccccccc
Confidence 46666655200 0
Q ss_pred -----------------------------------------------------------------------------C--
Q 005782 369 -----------------------------------------------------------------------------C-- 369 (677)
Q Consensus 369 -----------------------------------------------------------------------------~-- 369 (677)
.
T Consensus 456 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~ 535 (845)
T 3abz_A 456 NPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGS 535 (845)
T ss_dssp BCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEEC
T ss_pred ccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEecc
Confidence 0
Q ss_pred ----------------------CC-hhhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHhhCC
Q 005782 370 ----------------------AD-DQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASK 426 (677)
Q Consensus 370 ----------------------~~-~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~ 426 (677)
.+ ...+++|+++|++||+||||+|.+..+++||.||.+|.||+.|++||++|++++
T Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~~- 614 (845)
T 3abz_A 536 GPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKAN- 614 (845)
T ss_dssp TTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHHC-
T ss_pred CCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHhC-
Confidence 00 135788999999999999999999999999999999999999999999999864
Q ss_pred CCEEEEEecCceeecccccCCCCccEEEEccCCCchhHHHHHHHHcCCCCCCcccccccccccccCCCCcccCCCCC-CC
Q 005782 427 GPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRP-SQ 505 (677)
Q Consensus 427 ~pvVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AiAdvL~G~~nPsGkLPvT~~p~~~~~~~P~~~~~~~~-~~ 505 (677)
+|||||+++|+|++|+|++ +++|||++||||||+|+||||||||++|||||||+|| |++. +|+|.+++ +.. ..
T Consensus 615 ~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~-p~~~-~d~P~~~~-~~~~~g 688 (845)
T 3abz_A 615 PNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSW-PFKL-QDNPAFLN-FKTEFG 688 (845)
T ss_dssp SCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCB-CSSG-GGSTTTTS-CSCBTT
T ss_pred CCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceee-eCch-hhCCcccc-CCCCCC
Confidence 6899999999999999984 7999999999999999999999999999999999998 6775 56897543 211 10
Q ss_pred CCCCCC---CcccccC---CCCcccccccccccCceee--cccCCceeeccCCCCCCcccccccccccccccccCCCeeE
Q 005782 506 SKRYPG---RTYRFYK---GPVVYPFGHGMSYTNFVHT--VANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTL 577 (677)
Q Consensus 506 ~~~~~~---~~Yr~~~---~~~lypFG~GLSYT~F~ys--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (677)
...|.+ .+||||+ .+|+||||||||||||+|+ +++++ ++.+
T Consensus 689 ~~~y~eg~~vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~-------------------------------~~~~ 737 (845)
T 3abz_A 689 RVIYGEDIFVGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT-------------------------------DDKI 737 (845)
T ss_dssp EEECTTTTCCTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC-------------------------------SSEE
T ss_pred ceeccCCccCCCcchhcCCCceeecccCCCcceeEEEeccccccc-------------------------------CCeE
Confidence 111221 3599997 5799999999999999999 98721 1368
Q ss_pred EEEEEEEecC-CCCcceeEEEeecCCCC-CCCcccccccccccccCCCCeEEEEEEec-cCCCeeEEcCC-CcEEeeCeE
Q 005782 578 GVQVDVKNVG-SKDGAHTLLVFSTPPAG-HWAPHKQLVAFEKVHVPAGAQQRVGINIH-VCKYLSVVDRS-GTRRIPLGE 653 (677)
Q Consensus 578 ~v~v~V~NtG-~~~G~eVvQlYv~~~~~-~~~P~k~L~gF~kv~L~pGes~~V~~~l~-~~~~ls~~d~~-~~~~~e~G~ 653 (677)
+|+|+||||| +++|+||||||+++|.+ ..+|.|+||||+||+|+||||++|+|+|+ . ++|++||.. ++|++|+|+
T Consensus 738 ~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~ 816 (845)
T 3abz_A 738 AISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGE 816 (845)
T ss_dssp EEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEE
T ss_pred EEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCE
Confidence 9999999999 99999999999999987 57899999999999999999999999999 8 799999996 789999999
Q ss_pred EEEEEeCCCceEEEEE
Q 005782 654 HNIHIGGTKHSVSLHA 669 (677)
Q Consensus 654 y~i~vG~ss~~~~~~~ 669 (677)
|+|+||.||+++++..
T Consensus 817 y~v~vG~ss~di~l~~ 832 (845)
T 3abz_A 817 YLVSVGTSSDDILSVK 832 (845)
T ss_dssp EEEEEESSTTCEEEEE
T ss_pred EEEEEECCCCCceeEE
Confidence 9999999999987654
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=1.1e-124 Score=1088.19 Aligned_cols=559 Identities=25% Similarity=0.388 Sum_probs=464.5
Q ss_pred HHHHHHHHHhccCHHHHHHHhcc----------CCCCCCCCCcccceeccccccceeecCCCcccCCCCCCccccccccc
Q 005782 49 IPQRVNDLIGRLSLQEKVKLLIS----------GAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVIT 118 (677)
Q Consensus 49 ~~~rv~~ll~~mTleEKv~ql~~----------~~~~~~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~ 118 (677)
+++|+++||++||||||++|+.+ .+.+++|||||.+ ++.|++||++.. .++|.||++++
T Consensus 12 a~~ra~~l~~~lTl~EK~~l~~g~~~~~~~~~~~~~~i~rlgiP~~-~~~Dg~~G~r~~----------~~~T~fP~~~~ 80 (713)
T 3zyz_A 12 AYDKAKAALAKLNLQDKVGIVSGVGWNGGPCVGNTSPASKISYPSL-CLQDGPLGVRYS----------TGSTAFTPGVQ 80 (713)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHBBCCTTCSSSSEEBCCBGGGTBCCC-EEECCTTSCTTC----------SSCCCCCCHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHhcCCCcccCccccccCCcCCCCCceE-EEEecCceEECC----------CCCCcCcCHHH
Confidence 78999999999999999999975 3678999999999 579999998632 25899999999
Q ss_pred ccccCCHHHHHHHhc-----------------------------------------------------------------
Q 005782 119 TASSFNATLWEAIGR----------------------------------------------------------------- 133 (677)
Q Consensus 119 laat~d~~l~~~~g~----------------------------------------------------------------- 133 (677)
+|||||++|++++|+
T Consensus 81 laat~d~~l~~~~g~~~g~E~ra~Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~gV~a~~KHF 160 (713)
T 3zyz_A 81 AASTWDVNLIRERGQFIGEEVKASGIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSVGVQATAKHY 160 (713)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHhcCCHHHHHHHHHHHHHHHHhcCCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhCCeEEEEecC
Confidence 999999999999987
Q ss_pred ---------------cCHHHHhccCCHHHHHHHHcCCcceEEeeccccCCcccccCHHHHHHHhhcccccCcEEEcCCcc
Q 005782 134 ---------------VSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDS 198 (677)
Q Consensus 134 ---------------~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~ 198 (677)
+++++|+|+||+||+++|++| +++||||||.+||+|||.|++||++|||+||||+|+|||||++
T Consensus 161 ~g~g~e~~r~~~~~~v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a 239 (713)
T 3zyz_A 161 ILNEQELNRETISSNPDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNA 239 (713)
T ss_dssp TTCCCSTTTTTCEECCCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTC
T ss_pred ccCCccccCccccCcCCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCCccCcCCHHHHHHHHHHHcCCCEEEEecCcc
Confidence 899999999999999999987 5699999999999999999999999999999999999999987
Q ss_pred cccccccccccCCHHHHHHHHHHhCCCCCCcc--------chHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCC
Q 005782 199 VGVYYDTQHFTSTPEEAAADAIRAGLDLDCGP--------FLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGE 270 (677)
Q Consensus 199 m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~--------~~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~Glf~~~ 270 (677)
+. ++++|++||+||+|+. .+.+.|.+||++|+|++++||+||+|||++|+++|+|++
T Consensus 240 ~~--------------~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RIL~~k~~lg~~~~- 304 (713)
T 3zyz_A 240 QH--------------TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTSRVDDMVTRILAAWYLTGQDQA- 304 (713)
T ss_dssp CC--------------CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTST-
T ss_pred HH--------------HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCccc-
Confidence 42 3478999999999963 234789999999999999999999999999999999973
Q ss_pred CCCCCCCCCCCCccCCHHHHHHHHHHhhcceEEeecCCCCCCCCCCCCCeEEEECcCCCccc-----------------c
Q 005782 271 PSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTV-----------------T 333 (677)
Q Consensus 271 p~~~~~~~~~~~~v~~~~~~~la~~~A~~sivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~-----------------~ 333 (677)
+. |.... ....+++|+++|+++|++|||||||++++|||++. +||+||||+|+... .
T Consensus 305 ~~--~~~~~--~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A~~~~~G~~~~~~~~~~~~~~~~ 378 (713)
T 3zyz_A 305 GY--PSFNI--SRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAAIIGNHARNSPSCNDKGCDDGAL 378 (713)
T ss_dssp TC--CCCCT--TSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGGSCCTTTTTCTTSGGGCCCCSSC
T ss_pred CC--CCccc--ccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCccccccccccccccccccccCce
Confidence 21 11111 12236899999999999999999999899999864 79999999987421 1
Q ss_pred cccccc--ccCCccCCHHHHHhhce-----eEEEecCcCccCCCChhhHHHHHHHhhcCCEEEEEecCCCccccccc---
Q 005782 334 MIGNYA--GIACGYTTPLQGIGRYA-----RTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEAL--- 403 (677)
Q Consensus 334 ~~g~~~--~~~~~~~t~~~~l~~~~-----~v~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~--- 403 (677)
..|+++ ..+++.+|++++|+++. .+.|.. ...+++|+++|+++|++||++|.. ++|+.
T Consensus 379 ~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~~---------~~~~~~a~~~A~~aDv~Iv~vg~~---~gEg~~~~ 446 (713)
T 3zyz_A 379 GMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLSN---------TDNTSSGASAARGKDVAIVFITAD---SGEGYITV 446 (713)
T ss_dssp CCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEEC---------SCCHHHHHHHHTTCSEEEEEEEEC---CBCTTCCB
T ss_pred ecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEeC---------CccHHHHHHHhhcCCEEEEEeccc---CCCCcccc
Confidence 112223 34678899999999864 233322 235789999999999999999854 46666
Q ss_pred -----ccCCCCCCHHHHHHHHHHHhhCCCCEEEEEecCceeec-ccccCCCCccEEEEccCCCchhHHHHHHHHcCCCCC
Q 005782 404 -----DRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDV-AFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNP 477 (677)
Q Consensus 404 -----Dr~~l~Lp~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l-~~~~~~~~v~AiL~a~~~G~e~g~AiAdvL~G~~nP 477 (677)
||.+|.||+.|.+||++|+++ ++|+|||+++|+|++| +|+ +.++++|||++|||||++|+||||||||++||
T Consensus 447 ~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~aw~pGqegG~AiAdvL~G~~nP 524 (713)
T 3zyz_A 447 EGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVWAGLPSQESGNALVDVLWGDVSP 524 (713)
T ss_dssp TTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEECCCCGGGHHHHHHHHHTTSSCC
T ss_pred ccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEEcCCCCchhhheehhhhcCCcCC
Confidence 999999999999999999986 5689999999999999 676 34689999999999999999999999999999
Q ss_pred CcccccccccccccCCCCcccCCCCCCCCCCCCC---CcccccCC---CCcccccccccccCceeecccCCceeeccCCC
Q 005782 478 GGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPG---RTYRFYKG---PVVYPFGHGMSYTNFVHTVANAPTVVAVPLDG 551 (677)
Q Consensus 478 sGkLPvT~~p~~~~~~~P~~~~~~~~~~~~~~~~---~~Yr~~~~---~~lypFG~GLSYT~F~ys~~~~~~~~~~~~~~ 551 (677)
|||||+|| |++. +|+|.+.. +.+ ...|.+ ++||||+. +|+||||||||||||+|++++++... ..
T Consensus 525 SGkLP~T~-p~~~-~d~p~~~~-~~~--~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF~ys~l~~~~~~---~~- 595 (713)
T 3zyz_A 525 SGKLVYTI-AKSP-NDYNTRIV-SGG--SDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKFNYSRLSVLSTA---KS- 595 (713)
T ss_dssp CCCCSSCB-CSCG-GGSSCCCC-CSS--EECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCEEEEEEEEEECC---CC-
T ss_pred CccCccee-cCCh-hhCCCccc-cCC--ccccCCCCccCceeccCCCCceeecCCCCCCcccEEEeeeEecccc---cc-
Confidence 99999998 5664 56885321 111 113332 47999985 79999999999999999999853210 00
Q ss_pred CCCcccccccccccccccccCCCeeEEEEEEEEecCCCCcceeEEEeecCCCC-CCCcccccccccccccCCCCeEEEEE
Q 005782 552 RHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAG-HWAPHKQLVAFEKVHVPAGAQQRVGI 630 (677)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~-~~~P~k~L~gF~kv~L~pGes~~V~~ 630 (677)
.. . ..+.......+++++.++|+|+|||||+++|+||||||+++|.+ ..+|.||||||+||+|+||||++|+|
T Consensus 596 --~~--~--~~~~~~gg~~~~~~~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~ 669 (713)
T 3zyz_A 596 --GP--A--TGAVVPGGPSDLFQNVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLTPGQSGTATF 669 (713)
T ss_dssp --EE--C--CSCEETTEETTTTSEEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEECTTCEEEEEE
T ss_pred --Cc--c--cccccccccccccCCeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeCCCCeEEEEE
Confidence 00 0 00000000112235689999999999999999999999999987 57899999999999999999999999
Q ss_pred EeccCCCeeEEcCC-CcEEeeCeEEEEEEeCCCceEEEEEE
Q 005782 631 NIHVCKYLSVVDRS-GTRRIPLGEHNIHIGGTKHSVSLHAA 670 (677)
Q Consensus 631 ~l~~~~~ls~~d~~-~~~~~e~G~y~i~vG~ss~~~~~~~~ 670 (677)
+|++ ++|++||.. ++|++|+|+|+|+||.||++++++..
T Consensus 670 ~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~d~~l~~~ 709 (713)
T 3zyz_A 670 NIRR-RDLSYWDTASQKWVVPSGSFGISVGASSRDIRLTST 709 (713)
T ss_dssp EEEG-GGGCEEETTTTEEEECCEEEEEEEESSSSCEEEEEE
T ss_pred EEcH-HHeeeeecCCCeEEEcCceEEEEEECCCCCcceeEE
Confidence 9998 899999986 78999999999999999999887654
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=3.9e-123 Score=1081.01 Aligned_cols=558 Identities=26% Similarity=0.423 Sum_probs=468.4
Q ss_pred HHHHHHHhccCHHHHHHHhcc-------------------CCCCCCCCCcccceeccccccceeecCCCcccCCCCCCcc
Q 005782 51 QRVNDLIGRLSLQEKVKLLIS-------------------GAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGAT 111 (677)
Q Consensus 51 ~rv~~ll~~mTleEKv~ql~~-------------------~~~~~~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t 111 (677)
+|+++||++||||||++||.+ .+.+++|+|||.+ +++|++||++.. .+..++....++|
T Consensus 2 ~r~~~ll~~mTleEK~~~l~g~~~~~~~g~~~~~~~g~~g~~~~v~rlgiP~~-~~~D~~~G~~~~-~~~~~~~~~~~~t 79 (721)
T 2x41_A 2 EKVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPAGLRIN-PTRENDENTYYTT 79 (721)
T ss_dssp CHHHHHHHHCCHHHHHHHTBCCCSTTSTTCCCCSSTTCSEECCCBGGGTBCCC-EEECCTTSCCCC-SCCTTCCCCCCCC
T ss_pred hhHHHHHHcCCHHHHHHHhcCCCCCccccccccccccccccccCcccCCCCCE-EEEcCCCCcccc-ccccccccCCCcc
Confidence 589999999999999999986 4567899999999 789999998621 1111111134689
Q ss_pred cccccccccccCCHHHHHHHhc----------------------------------------------------------
Q 005782 112 SFPQVITTASSFNATLWEAIGR---------------------------------------------------------- 133 (677)
Q Consensus 112 ~fP~~~~laat~d~~l~~~~g~---------------------------------------------------------- 133 (677)
.||+++++|||||++|++++|+
T Consensus 80 ~fP~~~~laat~d~~l~~~~g~~~a~E~~a~Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~q~~gV~ 159 (721)
T 2x41_A 80 AFPVEIMLASTWNRELLEEVGKAMGEEVREYGVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQGVG 159 (721)
T ss_dssp CCCCHHHHHHTCCHHHHHHHHHHHHHHHHHTTCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHTTTCB
T ss_pred cCCCHHHHhhcCCHHHHHHHHHHHHHHHHHhCCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHhhhCCeE
Confidence 9999999999999999999986
Q ss_pred ---------------------cCHHHHhccCCHHHHHHHHcCCcceEEeeccccCCcccccCHHHHHHHhhcccccCcEE
Q 005782 134 ---------------------VSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYI 192 (677)
Q Consensus 134 ---------------------~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~V 192 (677)
+++++|+|+||+||+++|+++.+++||||||.+||.|||+|+++|++|||+||||+|+|
T Consensus 160 a~~KHF~g~g~e~~r~~~ds~~~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa~~s~~ll~~lLR~e~GF~G~V 239 (721)
T 2x41_A 160 ACIKHFVANNQETNRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFV 239 (721)
T ss_dssp CEEEEETTCCCCTTTTTCEEECCHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEE
T ss_pred EEecccccCCCCCCCCcccCCCCHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccccCCHHHHHHHHHHhcCCCEEE
Confidence 88999999999999999984447799999999999999999999999999999999999
Q ss_pred EcCCcccccccccccccCCHHHHHHHHHHhCCCCCCccc--h--H------HHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q 005782 193 VSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPF--L--G------LHTESAVQRGLLSEIDINNALVNTLTVQM 262 (677)
Q Consensus 193 vSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~--~--~------~~l~~av~~g~i~~~~id~av~RIL~~k~ 262 (677)
||||+++. ++++|++||+||+|+.. + . +.|.+||++|+|++++||+||+|||++|+
T Consensus 240 vSD~~~~~--------------~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~Ril~~k~ 305 (721)
T 2x41_A 240 MSDWYAGD--------------NPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLV 305 (721)
T ss_dssp EECTTCSS--------------CHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHT
T ss_pred EccCchHH--------------HHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 99998753 36889999999998632 2 2 78999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCCCCccCCHHHHHHHHHHhhcceEEeecCCCCCCCCCCCCCeEEEECcCCCcccccccc-cccc
Q 005782 263 RLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGN-YAGI 341 (677)
Q Consensus 263 ~~Glf~~~p~~~~~~~~~~~~v~~~~~~~la~~~A~~sivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~g~-~~~~ 341 (677)
++|+|+. | +. ...+++++|+++|+++|+||||||||++ +|||++. +||+||||+++....++++ +...
T Consensus 306 ~~gl~~~-~----~~---~~~~~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~kIaviG~~A~~~~~~g~gs~~~~ 374 (721)
T 2x41_A 306 NAPSFKN-Y----RY---SNKPDLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFGTGQIETIKGGTGSGDTH 374 (721)
T ss_dssp TSGGGGT-C----CC---CSCCCHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CCEEEESGGGTSCCCSCBSTTCCC
T ss_pred HhCCCCC-C----Cc---ccccCCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CEEEEEecCCcCccccCCCCCCcC
Confidence 9999984 3 11 2346789999999999999999999998 9999864 7999999999887554433 2335
Q ss_pred CCccCCHHHHHhhc-ee------EEEe-------------cC---cCcc--CCCChhhH--HHHHHHhhcCCEEEEEecC
Q 005782 342 ACGYTTPLQGIGRY-AR------TIHQ-------------QG---CKDV--ACADDQLF--GAAIDASRQADATILVMGL 394 (677)
Q Consensus 342 ~~~~~t~~~~l~~~-~~------v~y~-------------~g---~~~~--~~~~~~~~--~~a~~~a~~aD~vIv~vg~ 394 (677)
+.+.+|++++|+++ +. +.|. .| +... ...+...+ ++++++|+++|+|||++|.
T Consensus 375 ~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~ 454 (721)
T 2x41_A 375 PRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISR 454 (721)
T ss_dssp CSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEEC
T ss_pred cCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceeccccCCCchhhhcHHHHHHHHhcCCEEEEEEec
Confidence 67889999999987 42 4565 44 3110 11223445 7889999999999999997
Q ss_pred CCcccccccccC----CCCCCHHHHHHHHHHH----hhCCCCEEEEEecCceeec-ccccCCCCccEEEEccCCCchhHH
Q 005782 395 DQSIEAEALDRA----GLLLPGRQQELVSKVS----MASKGPTILVLMSGGPIDV-AFAKNDPRIAAIIWAGYPGQAGGT 465 (677)
Q Consensus 395 ~~~~~~Eg~Dr~----~l~Lp~~q~~Li~~v~----~~~~~pvVvVl~~g~P~~l-~~~~~~~~v~AiL~a~~~G~e~g~ 465 (677)
+ ++|+.||. ++.||+.|.+||++|+ ++ ++|+|||+++|+||+| +|+ ++++|||++|+||+++|+
T Consensus 455 ~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~-~~~vVVVl~~g~P~~l~~~~---~~v~AiL~a~~pG~egg~ 527 (721)
T 2x41_A 455 I---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQ-GKKVIVLLNIGSPVEVVSWR---DLVDGILLVWQAGQETGR 527 (721)
T ss_dssp C---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHT-TCCEEEEEECSSCCCCTTTG---GGCSEEEECCCCGGGHHH
T ss_pred c---ccccccccCCCCCccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCCceEccchh---hcCCEEEEcCCCchhHHH
Confidence 6 68999999 9999999999999998 64 5789999999999999 676 489999999999999999
Q ss_pred HHHHHHcCCCCCCcccccccccccccCCCCcccCCCCCCC---CCCCCC---CcccccCC---CCcccccccccccCcee
Q 005782 466 AIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQ---SKRYPG---RTYRFYKG---PVVYPFGHGMSYTNFVH 536 (677)
Q Consensus 466 AiAdvL~G~~nPsGkLPvT~~p~~~~~~~P~~~~~~~~~~---~~~~~~---~~Yr~~~~---~~lypFG~GLSYT~F~y 536 (677)
|+||||||++|||||||+|| |++. +|+|.+++..++.. ...|.+ .+|||||. +|+||||||||||||+|
T Consensus 528 AlAdVL~G~vnPSGkLPvT~-p~~~-~~~p~~~~~~~~~~~~~~~~y~eg~~vgYry~d~~~~~plypFG~GLSYTtF~y 605 (721)
T 2x41_A 528 IVADVLTGRINPSGKLPTTF-PRDY-SDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYTTFEY 605 (721)
T ss_dssp HHHHHHHTSSCCCCCCSSCE-ESSG-GGCSCTTTTCBSTTSCSEEECTTTTCCTHHHHHHHTCCEEECTTCCBCSSCEEE
T ss_pred HHHHHHcCCCCCCCCCceee-cCcc-ccCccccCCCCCccccccccccCCcccccceeecCCCceeeccCCCCCcceeEe
Confidence 99999999999999999998 6775 56887212111110 012322 37999974 79999999999999999
Q ss_pred ecccCCceeeccCCCCCCcccccccccccccccccCCCeeEEEEEEEEecCCCCcceeEEEeecCCCC-CCCcccccccc
Q 005782 537 TVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAG-HWAPHKQLVAF 615 (677)
Q Consensus 537 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~-~~~P~k~L~gF 615 (677)
++++++. .++.++|+|+|||||+++|+||||||+++|.+ ..+|.||||||
T Consensus 606 s~~~~~~-----------------------------~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF 656 (721)
T 2x41_A 606 SDLNVSF-----------------------------DGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAF 656 (721)
T ss_dssp EEEEEEE-----------------------------CSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEE
T ss_pred eceEeec-----------------------------CCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcc
Confidence 9988311 12469999999999999999999999999987 57899999999
Q ss_pred ccc-ccCCCCeEEEEEEeccCCCeeEEcCCCcEEeeCeEEEEEEeCCCceEEEEE--Eeecee
Q 005782 616 EKV-HVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHA--ATLGVI 675 (677)
Q Consensus 616 ~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG~ss~~~~~~~--~~~~~~ 675 (677)
+|| +|+||||++|+|+|++ ++|++|| .++|++|+|+|+|+||.||+++++.. ++.|.+
T Consensus 657 ~kv~~L~pGes~~V~~~l~~-~~l~~~d-~~~~~~e~G~y~v~vG~ss~d~~~~~~~~v~~~~ 717 (721)
T 2x41_A 657 HKTRLLNPGESEEVVLEIPV-RDLASFN-GEEWVVEAGEYEVRVGASSRNIKLKGTFSVGEER 717 (721)
T ss_dssp EECCCBCTTCEEEEEEEEEG-GGGCEEC-SSCEEECCEEEEEEEEEETTEEEEEEEEEECSCE
T ss_pred cccccCCCCCeEEEEEEECH-HHhcEEc-CCeEEEeCceEEEEEECCCCCcceEEEEEECceE
Confidence 999 9999999999999999 8999999 99999999999999999999986543 445543
No 4
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=5.9e-93 Score=812.27 Aligned_cols=438 Identities=26% Similarity=0.405 Sum_probs=375.7
Q ss_pred CCCCCCCCHHHHHHHHHhccCHHHHHHHhccC--------------------C------------------------CCC
Q 005782 41 PFCQVSLPIPQRVNDLIGRLSLQEKVKLLISG--------------------A------------------------AAV 76 (677)
Q Consensus 41 ~~~~~~~~~~~rv~~ll~~mTleEKv~ql~~~--------------------~------------------------~~~ 76 (677)
||+|++++.++|+++||++||||||++||.+. . ...
T Consensus 4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~ 83 (602)
T 1x38_A 4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS 83 (602)
T ss_dssp GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999998631 0 015
Q ss_pred CCCCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCHHHHHHHhc-----------------------
Q 005782 77 PRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGR----------------------- 133 (677)
Q Consensus 77 ~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~----------------------- 133 (677)
+|+|||.+ +++|++||+... .++|.||+++++|||||++|++++|+
T Consensus 84 ~rlgiP~l-~~~D~~~G~~~~----------~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aP~vdv~r 152 (602)
T 1x38_A 84 TRLGIPMI-YGIDAVHGQNNV----------YGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCR 152 (602)
T ss_dssp SSSCCCCE-EEECCSSSSTTS----------TTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCS
T ss_pred ccCCCCcE-EEEcCCCceeCC----------CCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHcCCCEEeeceecccc
Confidence 78999998 799999998521 25899999999999999999998876
Q ss_pred ------------------------------------------------------------------------cCHHHHhc
Q 005782 134 ------------------------------------------------------------------------VSKQDIED 141 (677)
Q Consensus 134 ------------------------------------------------------------------------~~~~~l~e 141 (677)
+++++|+|
T Consensus 153 ~p~~GR~~esfgeDP~lv~~~a~~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e 232 (602)
T 1x38_A 153 DPRWGRCYESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMN 232 (602)
T ss_dssp CTTSTTGGGSSCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHH
T ss_pred CCCcCccccCcCCCHHHHHHHHHHHHHhcCCCccccccccccccccCCeEEEeccccCCCccccCcccccCcCCHHHHHH
Confidence 34579999
Q ss_pred cCCHHHHHHHHcCCcceEEeeccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHHHH
Q 005782 142 TFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIR 221 (677)
Q Consensus 142 ~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~al~ 221 (677)
+||+||+++|++| +.+||||||.+||+|||+|+++|++|||+||||+|+|||||++|+++...|+ .+..+++++|++
T Consensus 233 ~~l~pF~~ai~ag-~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~--~~~~~a~~~al~ 309 (602)
T 1x38_A 233 IHMPAYKNAMDKG-VSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAG--SDYSYSVKASIL 309 (602)
T ss_dssp HTSHHHHHHHHTT-CCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTT--TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcC--CCHHHHHHHHHH
Confidence 9999999999987 5799999999999999999999999999999999999999999998876554 367899999999
Q ss_pred hCCCCCCccc----hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC-CCccCCHHHHHHHHHH
Q 005782 222 AGLDLDCGPF----LGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLG-PKDVCTPDHQELALEA 296 (677)
Q Consensus 222 AG~D~~~~~~----~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~Glf~~~p~~~~~~~~~-~~~v~~~~~~~la~~~ 296 (677)
||+||+|.+. +.+.|.+||++|+|++++||+||+|||++|+++|+|+ +| |.... ...+++++|+++++++
T Consensus 310 AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p----~~~~~~~~~~~~~~~~~la~~~ 384 (602)
T 1x38_A 310 AGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NP----YADPAMAEQLGKQEHRDLAREA 384 (602)
T ss_dssp HTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CC----SCCGGGGGGTTCHHHHHHHHHH
T ss_pred cCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CC----CCCcchhhccCCHHHHHHHHHH
Confidence 9999998642 3578999999999999999999999999999999998 43 32211 1357899999999999
Q ss_pred hhcceEEeecCC--C---CCCCCCCCCCeEEEECcCCCccccccccccc-------cCCccCCHHHHHhhce----eEEE
Q 005782 297 ARQGIVLLKNQG--P---SLPLSHIRHRTVAVIGPNSDVTVTMIGNYAG-------IACGYTTPLQGIGRYA----RTIH 360 (677)
Q Consensus 297 A~~sivLLKN~~--~---~LPL~~~~~~kIaviGp~a~~~~~~~g~~~~-------~~~~~~t~~~~l~~~~----~v~y 360 (677)
|++|||||||++ + +|||++. .+||+||||+|+....++|+|+. .+.+.+|++++|++.. .+.|
T Consensus 385 a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t~~~~l~~~~~~~~~v~~ 463 (602)
T 1x38_A 385 ARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVF 463 (602)
T ss_dssp HHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBCHHHHHHHHSCTTCEEEE
T ss_pred HHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCcccHHHHHHHHhCCCeEEEE
Confidence 999999999997 4 9999865 57999999999986555666532 2456789999999864 4777
Q ss_pred ecCcCccCCCChhhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHhhCCCCEEEEEecCceee
Q 005782 361 QQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPID 440 (677)
Q Consensus 361 ~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~~pvVvVl~~g~P~~ 440 (677)
..++. . ++. .++++|+|||++|.++..++|| ||.++.||+.|.+||++|++ ++|+|||+++|+||+
T Consensus 464 ~~~~~------~----~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~--~~~~VvVl~~g~P~~ 529 (602)
T 1x38_A 464 AENPD------A----EFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG--GVRCATVLISGRPVV 529 (602)
T ss_dssp ESSCC------H----HHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT--TSCEEEEEECSSCCC
T ss_pred cCCCC------H----HHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh--CCCEEEEEeCCCcee
Confidence 76642 1 122 3889999999999988888888 99999999999999999996 578999999999999
Q ss_pred cccccCCCCccEEEEccCCCchhHHHHHHHHcCCCCCCcccccccccccccCCCCcccCCCCCCCCCCCCCCcccccCCC
Q 005782 441 VAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGP 520 (677)
Q Consensus 441 l~~~~~~~~v~AiL~a~~~G~e~g~AiAdvL~G~~nPsGkLPvT~~p~~~~~~~P~~~~~~~~~~~~~~~~~~Yr~~~~~ 520 (677)
|.++. ++++|||++|+||+++ +|+||||||++|||||||+|| |++. +|+|+++ +||||+
T Consensus 530 l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~-p~~~-~~~p~~~--------------g~~~~~-- 588 (602)
T 1x38_A 530 VQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTW-FKSV-DQLPMNV--------------GDAHYD-- 588 (602)
T ss_dssp CHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCB-CSCG-GGCSCCT--------------TCSSCC--
T ss_pred ccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCcccc-cCcc-ccCCccC--------------CCCCCC--
Confidence 96443 4899999999999997 999999999999999999998 5664 6688531 378885
Q ss_pred CcccccccccccC
Q 005782 521 VVYPFGHGMSYTN 533 (677)
Q Consensus 521 ~lypFG~GLSYT~ 533 (677)
|+||||||||||+
T Consensus 589 plypFG~GLSYt~ 601 (602)
T 1x38_A 589 PLFRLGYGLTTNA 601 (602)
T ss_dssp CSBCTTCCBCCCC
T ss_pred ccCcCCCCcCCCC
Confidence 9999999999996
No 5
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=9.4e-93 Score=821.58 Aligned_cols=431 Identities=25% Similarity=0.417 Sum_probs=363.2
Q ss_pred CHHHHHHHHHhccCHHHHHHHhccC--------------------CCC-----------------------------CCC
Q 005782 48 PIPQRVNDLIGRLSLQEKVKLLISG--------------------AAA-----------------------------VPR 78 (677)
Q Consensus 48 ~~~~rv~~ll~~mTleEKv~ql~~~--------------------~~~-----------------------------~~r 78 (677)
+.++||++||++|||||||+||.+. ... ..|
T Consensus 21 ~~~~rV~~ll~~MTLeEKiGQL~~~~~~~~~~~~i~~~~vGgvi~~~~~~p~~~~~~s~~q~~~l~~~lq~~a~~~~~~r 100 (822)
T 3rrx_A 21 AVEAQIEKLLAKMTIEQKVAQMIQPEIGYLTVEQMRKYGFGSYLNGGNTAPYGNKRADQATWLKYADEMYLAAMDSTLDG 100 (822)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHEECBTTTCCHHHHHHHCCSEEEECSSSCGGGCSSCCHHHHHHHHHHHHHHHHCCTTTC
T ss_pred cHHHHHHHHHHcCCHHHHHhCccccccCCCCHHHHHhCCCceEEECCccCccccccCCHHHHHHHHHHHHHHHHhhhccc
Confidence 6899999999999999999999641 000 147
Q ss_pred CCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCHHHHHHHhc-------------------------
Q 005782 79 LGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGR------------------------- 133 (677)
Q Consensus 79 lgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~------------------------- 133 (677)
+|||++ +++|++||+... .++|.||+++++|||||++|++++|+
T Consensus 101 lgIPll-~~~D~~~G~~~~----------~~aT~FP~~i~laAt~d~~L~~~~g~~ia~E~ra~Gin~~~aPvvDv~rdP 169 (822)
T 3rrx_A 101 IAIPTV-WGTDAMHGHSNV----------YGATLFPHNIGLGAARDTDLIKRIGQATAKEVAATGIEWSFAPTVAVVRDD 169 (822)
T ss_dssp CCCCCE-EEEECTTSSTTS----------TTCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHTTTCCEEEEEECCCCSCT
T ss_pred CCCCeE-EEeccCCcEEcc----------CCCCCCcCHHHHhhcCCHHHHHHHHHHHHHHHHhcCCcEeeccccccccCC
Confidence 999998 799999998521 25899999999999999999999987
Q ss_pred ----------------------------------------------------------------cCHHHHhccCCHHHHH
Q 005782 134 ----------------------------------------------------------------VSKQDIEDTFDVPFRM 149 (677)
Q Consensus 134 ----------------------------------------------------------------~~~~~l~e~~l~PF~~ 149 (677)
+++++|+|+||+||++
T Consensus 170 r~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~~~r~~~~~~vs~~~L~e~~L~PF~~ 249 (822)
T 3rrx_A 170 RWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKHFVGDGGTERGVDRGNTLIDEKGLRDIHSAGYFS 249 (822)
T ss_dssp TSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSSTTTTCTTCCEEEEEEESCGGGBGGGCTTCEECCCHHHHHHTTSHHHHH
T ss_pred CcCccccCCCCCHHHHHHHHHHHHHHHhcccccccccCCCeEEEeeeccCCCccccCccCccCcCCHHHHHHHhhHHHHH
Confidence 8899999999999999
Q ss_pred HHHcCCcceEEeeccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHHHHhCCCCCCc
Q 005782 150 CVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCG 229 (677)
Q Consensus 150 ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~ 229 (677)
+|++| +.+||||||.+||+|+|.|++||++|||+||||+|+|||||++|+.+.+ ...+++++|++||+||+|+
T Consensus 250 aI~ag-~~sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~------~~~ea~~~Al~AG~Dm~m~ 322 (822)
T 3rrx_A 250 AINQG-VQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG------CDLEQCAQAINAGVDVIMV 322 (822)
T ss_dssp HHHTT-CSEEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT------CBTTBCHHHHHHTCCBEEC
T ss_pred HHHcC-CCEEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC------ChHHHHHHHHHcCCCEECC
Confidence 99988 5699999999999999999999999999999999999999999987643 2346778999999999987
Q ss_pred cc----hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCC--CCCCCCCCCccCCHHHHHHHHHHhhcceEE
Q 005782 230 PF----LGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSS--QPYGHLGPKDVCTPDHQELALEAARQGIVL 303 (677)
Q Consensus 230 ~~----~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~Glf~~~p~~--~~~~~~~~~~v~~~~~~~la~~~A~~sivL 303 (677)
+. +.+.|.+||++|+|++++||+||+|||++|+++|+|+. |.. .++.. ....+++++|+++|+++|++||||
T Consensus 323 ~~~~~~~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd~-p~~~~~~~~~-~~~~v~~~eh~~lAre~A~eSiVL 400 (822)
T 3rrx_A 323 PEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFTK-SKPSARPESQ-HPQWLGAAEHRTLAREAVRKSLVL 400 (822)
T ss_dssp TTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTTS-CCGGGSGGGS-CGGGTTCHHHHHHHHHHHHHHCEE
T ss_pred CccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCC-CCcccccccc-cccccCCHHHHHHHHHHHHhceEE
Confidence 52 35689999999999999999999999999999999994 311 11211 123578999999999999999999
Q ss_pred eecCCCCCCCCCCCCCeEEEECcCCCccccccccccc----------cCCccCCHHHHHhhce-----eEEEecCcCccC
Q 005782 304 LKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAG----------IACGYTTPLQGIGRYA-----RTIHQQGCKDVA 368 (677)
Q Consensus 304 LKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~g~~~~----------~~~~~~t~~~~l~~~~-----~v~y~~g~~~~~ 368 (677)
|||++++|||++. +||+||||+|++...+.|+|+. .+++.+|++++|++++ .+.|....
T Consensus 401 LKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~v~~~~~~---- 474 (822)
T 3rrx_A 401 LKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLSESG---- 474 (822)
T ss_dssp EEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCEEEECTTC----
T ss_pred EecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcCCeEEEcccc----
Confidence 9999899999874 6999999999987666676641 2357799999999864 24443210
Q ss_pred CCChhhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCC---HHHHHHHHHHHhhCCCCEEEEEecCceeeccccc
Q 005782 369 CADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLP---GRQQELVSKVSMASKGPTILVLMSGGPIDVAFAK 445 (677)
Q Consensus 369 ~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp---~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l~~~~ 445 (677)
+.++++|++||++|++...+++| ||.+|.|| +.|.+||++|++ .++|||||+++|+|+.|.++.
T Consensus 475 -----------~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a-~g~pvVvVl~sGrP~~l~~~~ 541 (822)
T 3rrx_A 475 -----------EYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA-DNIPVVTVFLSGRPLWVNKEL 541 (822)
T ss_dssp -----------CCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-TTCCEEEEEECSSCCBCHHHH
T ss_pred -----------cccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-hCCCEEEEEeCCcceeccchh
Confidence 24688999999999988777766 99999999 689999999997 578999999999999996554
Q ss_pred CCCCccEEEEccCCCchhHHHHHHHHcCCC------CCCcccccccccccccCCCCcccCCCCCCCCCCCCCCcccccCC
Q 005782 446 NDPRIAAIIWAGYPGQAGGTAIADILFGTS------NPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKG 519 (677)
Q Consensus 446 ~~~~v~AiL~a~~~G~e~g~AiAdvL~G~~------nPsGkLPvT~~p~~~~~~~P~~~~~~~~~~~~~~~~~~Yr~~~~ 519 (677)
++++|||++||||++++ ||||||||++ |||||||+|| |++ .+|+|+.+. +.+|
T Consensus 542 --~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~-~~q~P~~~~--------------~~~~-- 600 (822)
T 3rrx_A 542 --NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKY-DDQFTLNLN--------------DADY-- 600 (822)
T ss_dssp --HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSS-TTCTTCCTT--------------CSSC--
T ss_pred --hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCC-cccCCcccC--------------CCCC--
Confidence 37999999999999987 9999999997 9999999998 676 478996211 1122
Q ss_pred CCcccccccccccCceeec
Q 005782 520 PVVYPFGHGMSYTNFVHTV 538 (677)
Q Consensus 520 ~~lypFG~GLSYT~F~ys~ 538 (677)
+|+||||||||||+|+|..
T Consensus 601 ~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 601 DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp CCSBCTTCCBCTTCCCCCC
T ss_pred ccccCCCCCcCCCCCcccc
Confidence 7999999999999999964
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=6.6e-82 Score=725.27 Aligned_cols=419 Identities=20% Similarity=0.255 Sum_probs=337.6
Q ss_pred CCCHHHHHHHHHhccCHHHHHHHhccCC--------------C-----------------C-------------------
Q 005782 46 SLPIPQRVNDLIGRLSLQEKVKLLISGA--------------A-----------------A------------------- 75 (677)
Q Consensus 46 ~~~~~~rv~~ll~~mTleEKv~ql~~~~--------------~-----------------~------------------- 75 (677)
+.+.++|+++||++||||||++||.+.. . +
T Consensus 28 ~~~~~~rv~~ll~~MTleEKiGQl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vGgvil~~~n~~~~~q~~~l~~ 107 (642)
T 3bmx_A 28 ASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTD 107 (642)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHTEECBCSEECCTTCSSCEECCSCCHHHHHHHHHHCCSEEECCGGGCSSHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCHHHHHhCceeecccccccccccccCCCCCCcHHHHHHHHhCCCcEEEECCCCCCCHHHHHHHHH
Confidence 5578999999999999999999985410 0 0
Q ss_pred -C--CCCCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCHHHHHHHhc-------------------
Q 005782 76 -V--PRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGR------------------- 133 (677)
Q Consensus 76 -~--~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~------------------- 133 (677)
+ .++|||++ +..|++||... ++. . .|.||+++++|||||++|++++|+
T Consensus 108 ~lq~~~~~iPll-i~~D~e~G~v~-----r~~---~-~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aPvv 177 (642)
T 3bmx_A 108 DYQKASPKIPLM-LSIDQEGGIVT-----RLG---E-GTNFPGNMALGAARSRINAYQTGSIIGKELSALGINTDFSPVV 177 (642)
T ss_dssp HHHHHCSSSCCE-EEECCCBTTBC-----CCS---S-SCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHTCCEECCCBC
T ss_pred HHHHHhcCCCcE-EEEcCCCCcee-----cCC---C-CCCCCCHHHHHhhCCHHHHHHHHHHHHHHHHHcCCCEEECCcc
Confidence 0 36799988 78999999642 221 2 399999999999999999999986
Q ss_pred ----------------------------------------------------------------cCHHHHhccCCHHHHH
Q 005782 134 ----------------------------------------------------------------VSKQDIEDTFDVPFRM 149 (677)
Q Consensus 134 ----------------------------------------------------------------~~~~~l~e~~l~PF~~ 149 (677)
+++++|+|+||+||++
T Consensus 178 Dv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~gV~a~~KHFpg~g~~~~dsh~~~~~~~~~~~~l~e~~l~PF~~ 257 (642)
T 3bmx_A 178 DINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQK 257 (642)
T ss_dssp CCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHTTCEEEEEEETCCTTCSSCTTTSCCBCCCCHHHHHHTTHHHHHH
T ss_pred ccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhCCceEEeccccCCCCccCCCCCCCceeccCHHHHhhhhHHHHHH
Confidence 4899999999999999
Q ss_pred HHHcCCcceEEee---ccccC-------------CcccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHH
Q 005782 150 CVMEGKVASVMCS---YNQVN-------------GVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPE 213 (677)
Q Consensus 150 ai~~g~~~~vM~s---y~~vn-------------g~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ 213 (677)
+|++| +++|||| ||.+| |+|||+|+++|++|||+||||+|+|||||++|+++... + +..
T Consensus 258 ai~ag-~~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~m~ai~~~--~--~~~ 332 (642)
T 3bmx_A 258 AIDAG-ADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADH--F--GQE 332 (642)
T ss_dssp HHHTT-CCEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT--S--CHH
T ss_pred HHHcC-CCEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEEeCchhhHHHHhc--C--CHH
Confidence 99988 4799999 66777 78999999999999999999999999999999988652 2 578
Q ss_pred HHHHHHHHhCCCCCCcc-------------chHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 005782 214 EAAADAIRAGLDLDCGP-------------FLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLG 280 (677)
Q Consensus 214 ea~~~al~AG~D~~~~~-------------~~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~Glf~~~p~~~~~~~~~ 280 (677)
+++++|++||+||+|.+ .+.+.|.+||++|+|++++||+||+|||++|+++|+|+..| |....
T Consensus 333 ~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~gl~~~~p----~~~~~ 408 (642)
T 3bmx_A 333 EAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARN----SDSTK 408 (642)
T ss_dssp HHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCSSCCC----CCCHH
T ss_pred HHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHcCCCcCCC----Ccccc
Confidence 99999999999998432 23568999999999999999999999999999999998423 33210
Q ss_pred ------CCccCCHHHHHHHHHHhhcceEEeecCCCCCCCCCCCCCeEEEECcCCCccccccccccccCCccCCHHHHHhh
Q 005782 281 ------PKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGR 354 (677)
Q Consensus 281 ------~~~v~~~~~~~la~~~A~~sivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~g~~~~~~~~~~t~~~~l~~ 354 (677)
...+++++|+++++++|++|||||||++++|||++++.+||+||||+++. ..+++++|++
T Consensus 409 ~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~--------------~~~~~~~l~~ 474 (642)
T 3bmx_A 409 EKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ--------------TASIEQTIHD 474 (642)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH--------------HHHHHHHHHH
T ss_pred cchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc--------------hhhHHHHHHH
Confidence 12467899999999999999999999989999986446799999987432 2467888887
Q ss_pred ce---eEEEecCcCccCCCChhhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHH------------HHHHH
Q 005782 355 YA---RTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQ------------QELVS 419 (677)
Q Consensus 355 ~~---~v~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q------------~~Li~ 419 (677)
+. .+.+..++... ..+...++++++.++++|+|||+++.......| ++.+|+.| .+||+
T Consensus 475 ~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l~~~q~~~~~~~~~~~~~~li~ 548 (642)
T 3bmx_A 475 LIKRKKIKPVSLSKMN-FASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGVIDDTISDSSKWATVFPRAVMK 548 (642)
T ss_dssp HHHTTSSCCCEEEEEE-CTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTEECCCCCSSTTHHHHHHHHHHH
T ss_pred hhCCCCeeEEeccCCC-CcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCCccccccccccccchhHHHHHH
Confidence 64 23333332111 111245678899999999999966533111122 34566667 89999
Q ss_pred HHHhhCCCCEEEEEecCceeecccccCCCCccEEEEccCC--------CchhHHHHHHHHcCCCCCCccccccccccccc
Q 005782 420 KVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYP--------GQAGGTAIADILFGTSNPGGKLPMTWYPQEYI 491 (677)
Q Consensus 420 ~v~~~~~~pvVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~--------G~e~g~AiAdvL~G~~nPsGkLPvT~~p~~~~ 491 (677)
++++ ++||+|||. .|+||+++|+. +++|||++|++ |+++|+|+||||||++|||||||+|| |++.
T Consensus 549 ~~~~-~~~pvVvv~-~g~P~~l~~~~---~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~nPsGkLPvt~-p~~~- 621 (642)
T 3bmx_A 549 AALQ-HNKPFVLMS-LRNPYDAANFE---EAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDI-PSVT- 621 (642)
T ss_dssp HHHH-TTCCEEEEE-CSCGGGGGGCT---TCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSCCCCCCSSCE-ECSS-
T ss_pred HHHH-cCCCEEEEe-cCChhcccccc---ccCeEEEEccCcccccccccchHHHHHHHHHcCCCCCCccCceee-eccC-
Confidence 9986 678888765 58899999984 69999999999 79999999999999999999999998 4431
Q ss_pred CCCCcccCCCCCCCCCCCCCCcccccCCCCcccccccccccCce
Q 005782 492 TNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFV 535 (677)
Q Consensus 492 ~~~P~~~~~~~~~~~~~~~~~~Yr~~~~~~lypFG~GLSYT~F~ 535 (677)
. + .+|+||||||||||+|.
T Consensus 622 --~---------------~--------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 622 --K---------------P--------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp --S---------------T--------TSEEECTTCCBCTTTCS
T ss_pred --C---------------C--------CCcccCCCCCccCCCCC
Confidence 1 1 26999999999999985
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=1e-50 Score=451.02 Aligned_cols=338 Identities=18% Similarity=0.177 Sum_probs=249.2
Q ss_pred CCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCH------HHHHHHhc-------------------
Q 005782 79 LGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNA------TLWEAIGR------------------- 133 (677)
Q Consensus 79 lgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~------~l~~~~g~------------------- 133 (677)
.|||++ +..|++||... ++ .++|.||+++++|||||+ +|++++|+
T Consensus 82 agiPll-i~~D~egG~v~-----rl----~~~T~fP~~~alaat~~~d~~~~~~La~~~G~~~a~Elra~Gin~~fAPvv 151 (535)
T 3sql_A 82 AEIPLL-IAADIEEGVGQ-----RF----RGATEFPPPMAFGEIWRTDPHQAIALAETMGATTAQEALSLGINWVLAPVL 151 (535)
T ss_dssp CSSCCE-EEECCSSCHHH-----HS----TTSCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEECCCBC
T ss_pred cCCCeE-EEeccCCCcee-----ec----CCCCCCCCHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHhCCCEEecCee
Confidence 589988 78999998632 22 257999999999999965 68998886
Q ss_pred ----------------------------------------------------------------cCHHHHhccCCHHHHH
Q 005782 134 ----------------------------------------------------------------VSKQDIEDTFDVPFRM 149 (677)
Q Consensus 134 ----------------------------------------------------------------~~~~~l~e~~l~PF~~ 149 (677)
+++++|+|+||+||++
T Consensus 152 Dv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~gV~a~~KHFpG~G~~~~Dsh~~~~~v~~s~~~L~e~~L~PF~~ 231 (535)
T 3sql_A 152 DVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQYAVLTTAKHFPGHGDTATDSHLALPTISHDDTRLNTVELPPFKA 231 (535)
T ss_dssp CCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTSSCBCEEEEETCCCSCSCCTTTSCCBCCCCHHHHHHTTSHHHHH
T ss_pred ccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhcccceeeeeecccCCcccCCccCCCcCCCCHHHHHHHHHHHHHH
Confidence 4799999999999999
Q ss_pred HHHcCCcceEEeeccccCC----cccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHHHHhCCC
Q 005782 150 CVMEGKVASVMCSYNQVNG----VPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLD 225 (677)
Q Consensus 150 ai~~g~~~~vM~sy~~vng----~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D 225 (677)
+|++| +.+||||||.+|+ .|||+|+++|++|||+||||+|+|||||++|+++... .+..|++++|++||+|
T Consensus 232 aI~ag-~~sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~----~~~~eaa~~Al~AG~D 306 (535)
T 3sql_A 232 AIQGG-VDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF----AAPDTVVVQAIAAGAD 306 (535)
T ss_dssp HHHTT-CSEEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT----SCHHHHHHHHHHHTCS
T ss_pred HHHcC-CCEEEecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc----CCHHHHHHHHHHCCCC
Confidence 99988 5699999998874 8999999999999999999999999999999988653 2678999999999999
Q ss_pred CCCcc----chHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccCCHHHHHHHHHHhhcce
Q 005782 226 LDCGP----FLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGI 301 (677)
Q Consensus 226 ~~~~~----~~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~Glf~~~p~~~~~~~~~~~~v~~~~~~~la~~~A~~si 301 (677)
|+|.+ ...+.|.+||++|+|++++||+||+|||++|+++|+|+.++ ... ...+++++|+++|+++|+|||
T Consensus 307 m~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~~~~-----~~~-~~~~~~~eh~~lA~e~A~eSi 380 (535)
T 3sql_A 307 ILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTATPST-----FPQ-GISGDRPETRKTVAMVLERAT 380 (535)
T ss_dssp BEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSCCCC-----TTT-TCCTTCHHHHHHHHHHHHHHC
T ss_pred eecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCc-----cch-hhccCCHHHHHHHHHHHHhCe
Confidence 97532 34578999999999999999999999999999999998322 122 236789999999999999999
Q ss_pred EEeecCCCCCCCC----CCCCCeEEEECcCCCccccccccccccCCccCCHHHHHhhc-eeEEEecCcCccCCCChhhHH
Q 005782 302 VLLKNQGPSLPLS----HIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRY-ARTIHQQGCKDVACADDQLFG 376 (677)
Q Consensus 302 vLLKN~~~~LPL~----~~~~~kIaviGp~a~~~~~~~g~~~~~~~~~~t~~~~l~~~-~~v~y~~g~~~~~~~~~~~~~ 376 (677)
|| +++|||+ +++.++|+|||++++... |.|.++..++| ++. +++.+...+...
T Consensus 381 VL----~~~LPL~~~~~~~~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~~~~~~~~~~~--------- 438 (535)
T 3sql_A 381 KH----QKSLVKISSFPDNFARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYAAEIVELKTLP--------- 438 (535)
T ss_dssp EE----CSSCCCCCCCSTTSEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEEEEEEETTTGG---------
T ss_pred EE----CCcCCCCcccccCCCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCceEEEEcCcccc---------
Confidence 99 3599998 345689999999997753 44444444555 233 355555433100
Q ss_pred HHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHhhCCCCEEEEEecCceeecccccCCCCccEEEEc
Q 005782 377 AAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWA 456 (677)
Q Consensus 377 ~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l~~~~~~~~v~AiL~a 456 (677)
. .......-.+=+|+-.++...+ -. |. .+.++++.+.. . +--++.-|+||...|+.. ..+.|-++
T Consensus 439 ~-~~~~~~~~~~q~f~r~~~f~~~-------~~-~~--~~~~~~l~~~~-~-~~~~~~yg~py~~~~~~~--~~~~~p~~ 503 (535)
T 3sql_A 439 R-LQLEAIPTLIQCFLRGNPFTEK-------LA-DP--IDVLQKIAAQI-P-LQGVIFYGSPYFLEALQT--TLPEIPWW 503 (535)
T ss_dssp G-BCCCSSCEEEEEEECCCSSCSS-------CC-CC--HHHHHHHHHHS-C-EEEEEEEECCTTHHHHHH--HCTTSCEE
T ss_pred c-cccCCCCeEEEEeecCCCCCCC-------cc-hH--HHHHHHHHhcC-c-eeEEEEeCChhHHHHHHH--HhhcCCcc
Confidence 0 0001122334455543433222 22 22 56777777643 2 333334477999988852 22244456
Q ss_pred cCCCc--hhHHHHHHHHcCC
Q 005782 457 GYPGQ--AGGTAIADILFGT 474 (677)
Q Consensus 457 ~~~G~--e~g~AiAdvL~G~ 474 (677)
|.+|| +++.-+...||+.
T Consensus 504 ~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 504 FSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp EESCCSHHHHHHHHHHTCSS
T ss_pred cCCccCHHHHHHHHHHHhcc
Confidence 77885 5666666777774
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=8.4e-36 Score=317.29 Aligned_cols=173 Identities=19% Similarity=0.222 Sum_probs=143.8
Q ss_pred CCCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCHHHHHHHhc------------------------
Q 005782 78 RLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGR------------------------ 133 (677)
Q Consensus 78 rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~------------------------ 133 (677)
++|||++ +..|++||.... ..++|.||+++++|||||++|++++|+
T Consensus 70 ~~~iPll-i~~D~egG~v~r---------~~~~t~~P~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aPv~Dv~r~ 139 (351)
T 3tev_A 70 VMGEHAL-IAIDHEGGAITR---------PEFWPFAPSAMSLGAADDQQLTEDVNAALARQLRSVGINWNFTPVLDINVN 139 (351)
T ss_dssp HHCTTCE-EEECC----------------------CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHTCCEECCCBCCCCCC
T ss_pred HhCCCCc-eeEeCCCCeEeC---------CCCCCCCCCHHHHHhcCCHHHHHHHHHHHHHHHHHcCCCEeccceeEeccC
Confidence 5789998 789999996422 135899999999999999999999986
Q ss_pred -----------------------------------------------------------cCHHHHhccCCHHHHHHHHcC
Q 005782 134 -----------------------------------------------------------VSKQDIEDTFDVPFRMCVMEG 154 (677)
Q Consensus 134 -----------------------------------------------------------~~~~~l~e~~l~PF~~ai~~g 154 (677)
+++++|+|+||+||+++ ++|
T Consensus 140 p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~gV~a~~KHFpG~g~~~~dsh~~~~~~~~s~~~L~e~~l~PF~~a-~ag 218 (351)
T 3tev_A 140 PANPVIGDRAYGSDAARVTRHGRAALAGHTREGVAPCAKHFPGHGDTHQDSHLALPRVSKSRAELDAGELAPFRAL-LPE 218 (351)
T ss_dssp TTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTTTCEECEEEETCCTTCBCSSTTSCCEECCCHHHHHHTTTHHHHHH-GGG
T ss_pred CCCCcccccCCCCCHHHHHHHHHHHHHHHHHcCCeEEeeeccCCCCCcCCCCcCCCcCCCCHHHHHHhhhHHHHHH-hcC
Confidence 58999999999999999 776
Q ss_pred CcceEEee---ccccCC-cccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHHHHhCCCCCCcc
Q 005782 155 KVASVMCS---YNQVNG-VPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGP 230 (677)
Q Consensus 155 ~~~~vM~s---y~~vng-~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~ 230 (677)
+.+|||| ||.+|| .|||+|+++|++|||+||||+|+|||||++|+++...+ +..+++++|++||+||+|++
T Consensus 219 -~~~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~~----~~~~~~~~Al~AG~D~~l~~ 293 (351)
T 3tev_A 219 -TPAIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDANY----GRGEAAVRALRAGADLVMAL 293 (351)
T ss_dssp -CSEEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHHS----CHHHHHHHHHHHTCSBEECC
T ss_pred -CCEEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhcC----CHHHHHHHHHHcCCCEECCC
Confidence 5699999 889998 79999999999999999999999999999999886532 46799999999999999863
Q ss_pred c-------hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCC
Q 005782 231 F-------LGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDG 269 (677)
Q Consensus 231 ~-------~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~Glf~~ 269 (677)
. ..+.|.++|++ ++++||+||+|||++|+++|+|++
T Consensus 294 ~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~~ 336 (351)
T 3tev_A 294 GRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQAD 336 (351)
T ss_dssp SSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC-
T ss_pred CChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCCC
Confidence 2 24678888888 999999999999999999999993
No 9
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=99.96 E-value=9.2e-31 Score=277.96 Aligned_cols=170 Identities=18% Similarity=0.141 Sum_probs=138.7
Q ss_pred CCCCCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCH------HHHHHHhc----------------
Q 005782 76 VPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNA------TLWEAIGR---------------- 133 (677)
Q Consensus 76 ~~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~------~l~~~~g~---------------- 133 (677)
+.+++||++ +..|.++|... ++. .+++|.||+++++|||||+ +|++++|+
T Consensus 59 i~~~~iPll-i~vD~EgG~v~-----r~~--~~g~t~fP~~~~laat~d~d~~~~~~la~~~g~~~a~El~a~Gi~~~~a 130 (348)
T 4g6c_A 59 IRAVREDIL-IAVDHEGGRVQ-----RFR--TDGFTVLPAMRRLGELWDRDVLLATKVATAVGYILAAELRACGIDMSFT 130 (348)
T ss_dssp HHHHCTTCE-EEECEEETTEE-----SCC--STTCCCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCEECC
T ss_pred HHHhCCCce-EEecCCCCcee-----cCC--CCCCCCCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHcCCCEeec
Confidence 456678987 78899988532 221 1368999999999999997 69998875
Q ss_pred ------------------------------------------------------------------cCHHHHhccCCHHH
Q 005782 134 ------------------------------------------------------------------VSKQDIEDTFDVPF 147 (677)
Q Consensus 134 ------------------------------------------------------------------~~~~~l~e~~l~PF 147 (677)
.+.++|++.||+||
T Consensus 131 Pv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~~GV~a~~KHFpG~G~~~~dsh~~~~v~~~~~~el~~~~l~PF 210 (348)
T 4g6c_A 131 PVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLAGMANCGKHFPGHGFAEADSHVALPTDDRTLDAILEQDVAPY 210 (348)
T ss_dssp CBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHHTTCCCCEEEETCSSSCCC----CCCEECCCHHHHHHTTSHHH
T ss_pred CccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHhcCCceeeCCCCCCCCccCCCCCCCCcCCCCHHHHHHHHHHHH
Confidence 45567777899999
Q ss_pred HHHHHcCCcceEEee---ccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHHHHhCC
Q 005782 148 RMCVMEGKVASVMCS---YNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGL 224 (677)
Q Consensus 148 ~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~ 224 (677)
+++ ++| +.+|||| ||.+||.|||+|+++|++|||+||||+|+|||||++|+++. ...+..|++++|++||+
T Consensus 211 ~~a-~ag-~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~~~~e~a~~Al~AG~ 284 (348)
T 4g6c_A 211 DWL-GLS-LAAVIPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAAR----EGGTLTQAADAALAAGC 284 (348)
T ss_dssp HHH-GGG-CCEEEECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGG----TTCCHHHHHHHHHHHTC
T ss_pred HHH-hcC-CCeEEecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhh----hcCCHHHHHHHHHHcCC
Confidence 999 777 5699999 99999999999999999999999999999999999998763 34578899999999999
Q ss_pred CCCCccc---hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 005782 225 DLDCGPF---LGLHTESAVQRGLLSEIDINNALVNTLTVQMRL 264 (677)
Q Consensus 225 D~~~~~~---~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~ 264 (677)
||+|.+. ....+.++|+. +.++++++||++++.|.
T Consensus 285 Dm~l~~~~~~~~~~~~~al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 285 DMVLVCNQPDAAEVVLNGLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp SEEECCSCHHHHHHHHHHCCC-------CHHHHHHHHTTSCCS
T ss_pred CEECCCCChHHHHHHHHHhhc-----ccchHHHHHHHHHHhcc
Confidence 9998743 33456666643 56899999999998764
No 10
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=99.96 E-value=1.2e-30 Score=276.82 Aligned_cols=170 Identities=19% Similarity=0.167 Sum_probs=141.4
Q ss_pred CcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCH----HHHHHHhc----------------------
Q 005782 80 GIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNA----TLWEAIGR---------------------- 133 (677)
Q Consensus 80 gip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~----~l~~~~g~---------------------- 133 (677)
+||++ +..|.++|... |+ ..++|.||+++++|||||+ +|++++|+
T Consensus 54 ~iPll-i~vD~egG~v~-----r~---~~g~t~fP~~~~lgat~d~~~~~~la~~~g~~~a~Elra~Gin~~faPv~Dv~ 124 (349)
T 4gvf_A 54 RNHLV-VAVDQEGGRVQ-----RF---REGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVG 124 (349)
T ss_dssp SSCCE-EEECEEETTEE-----SC---CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEECCCBCCCC
T ss_pred CCCce-eeecCCCceee-----cc---CCCCCCCccHHHHHHhcCcchHHHHHHHHHHHHHHHHHHcCCCEEecCcccCC
Confidence 68988 78999988642 22 2468999999999999998 89999886
Q ss_pred -----------------------------------------------------------cCHHHHhccCCHHHHHHHHcC
Q 005782 134 -----------------------------------------------------------VSKQDIEDTFDVPFRMCVMEG 154 (677)
Q Consensus 134 -----------------------------------------------------------~~~~~l~e~~l~PF~~ai~~g 154 (677)
.+.++|+|.||+||+++|++|
T Consensus 125 r~~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~GV~a~~KHFpG~G~~~~dsh~~~~v~~~s~~el~~~~l~PF~~aI~~g 204 (349)
T 4gvf_A 125 HISAAIGERSYHADPAKALAMATRFIDGMHDAGMKTTGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRTLISEN 204 (349)
T ss_dssp SCCTTTGGGSSCSSHHHHHHHHHHHHHHHHHHTCCCEEEEETCCTTCCCCSSSSCCBCCCCHHHHHHTHHHHHHHHHHTT
T ss_pred CCCCCCcCcCCCCCHHHHHHHHHHHHHHHHHcCceeeecccccCCCcccCCCCCCCCCCcCHHHHHHHHhHHHHHHHHcC
Confidence 466899999999999999999
Q ss_pred CcceEEee---ccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHHHHhCCCCCCccc
Q 005782 155 KVASVMCS---YNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPF 231 (677)
Q Consensus 155 ~~~~vM~s---y~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~ 231 (677)
.+.+|||| ||.+||.|||+|+++|++|||+||||+|+|||||++|+++. ...+..+++++|++||+||+|.+.
T Consensus 205 ~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~~~~eaa~~Al~AG~Dm~l~~~ 280 (349)
T 4gvf_A 205 KLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA----IMGSYAERAQASLDAGCDMILVCN 280 (349)
T ss_dssp CCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG----GGCCHHHHHHHHHHHTCSEEEECS
T ss_pred CCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc----ccCCHHHHHHHHHHcCCCEEcCCC
Confidence 67799999 99999999999999999999999999999999999998653 345788999999999999998643
Q ss_pred ---hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 005782 232 ---LGLHTESAVQRGLLSEIDINNALVNTLTVQMRL 264 (677)
Q Consensus 232 ---~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~ 264 (677)
....+.+++.+ ++++|+++++.|++.-.+.+
T Consensus 281 ~~~~~~~~l~al~~--~~~~r~~~~~~r~~~~~~~l 314 (349)
T 4gvf_A 281 NRKGAVSVLDNLSP--IKAERVTRLYHKGSFSRREL 314 (349)
T ss_dssp CHHHHHHHHHHSCC--CCCGGGGGGCCCCCCCHHHH
T ss_pred CHHHHHHHHHHhhh--ccHHHHHHHhhcCCCCHHHH
Confidence 23456667654 67788888777765544444
No 11
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=99.95 E-value=1.3e-29 Score=268.51 Aligned_cols=169 Identities=18% Similarity=0.147 Sum_probs=140.3
Q ss_pred CCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCC--HHHHHHHhc-----------------------
Q 005782 79 LGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFN--ATLWEAIGR----------------------- 133 (677)
Q Consensus 79 lgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d--~~l~~~~g~----------------------- 133 (677)
.+||++ +..|.++|... ++ ..++|.||+++++|| || ++|++++|+
T Consensus 53 ~~iPll-i~~D~egG~v~-----r~---~~~~t~fP~~~~laa-~d~~~~la~~~g~~~a~E~ra~Gi~~~~aPv~Dv~~ 122 (340)
T 2oxn_A 53 AKRPIL-IGVDQEGGRVQ-----RF---REGFSRIPPAQYYAR-AENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMGF 122 (340)
T ss_dssp HSSCCE-EEECEEETTEE-----SC---CTTSCCCCCGGGGGG-STTHHHHHHHHHHHHHHHHHTTTCCEECCCBCCCCS
T ss_pred cCCCeE-eeecCCCeeEe-----cc---CCCCCCCCCHHHHhC-CCcHHHHHHHHHHHHHHHHHHhCCCEEecCccCCCC
Confidence 378988 78899988532 22 236899999999999 99 999999886
Q ss_pred -------------------------------------------------------cCH-HHHhccCCHHHHHHHHcCCcc
Q 005782 134 -------------------------------------------------------VSK-QDIEDTFDVPFRMCVMEGKVA 157 (677)
Q Consensus 134 -------------------------------------------------------~~~-~~l~e~~l~PF~~ai~~g~~~ 157 (677)
+++ ++| |+||+||+++|++|.+.
T Consensus 123 ~~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~gV~a~~KHFpG~G~~~~dsh~~~~v~~~~~l-~~~l~PF~~ai~~g~~~ 201 (340)
T 2oxn_A 123 ACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDERETI-AQDMAIFRAQIEAGVLD 201 (340)
T ss_dssp CSTTTGGGSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEETCCTTCCSCCSSSSCBCCCSCC-HHHHHHHHHHHHHTCCS
T ss_pred CCCcCcCCCCCCCHHHHHHHHHHHHHHHHHCCceeeeccCcCCCCccCCCCCCCccCCHHHH-HHHHHHHHHHHHcCCCC
Confidence 333 788 99999999999999667
Q ss_pred eEEee---ccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHHHHhCCCCCCccc---
Q 005782 158 SVMCS---YNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPF--- 231 (677)
Q Consensus 158 ~vM~s---y~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~--- 231 (677)
+|||| ||.+||.|||+|+++|++|||+||||+|+|||||++|+++. ...+..+++++|++||+||+|.+.
T Consensus 202 ~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~~~~ea~~~Al~AG~Dm~l~~~~~~ 277 (340)
T 2oxn_A 202 AMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAA----VMGGPVERSHQALVAGCDMILICNKRE 277 (340)
T ss_dssp EEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHH----HHCSHHHHHHHHHHHTCSEEECCSCHH
T ss_pred eeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhh----ccCCHHHHHHHHHHcCCCEEcCCCCHH
Confidence 99999 99999999999999999999999999999999999998753 234778999999999999998642
Q ss_pred hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 005782 232 LGLHTESAVQRGLLSEIDINNALVNTLTVQMRL 264 (677)
Q Consensus 232 ~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~ 264 (677)
....+.++++ .++++|+++++.|+....+++
T Consensus 278 ~~~~~~~av~--~~~~~Rl~~~~~~~~~~~~~l 308 (340)
T 2oxn_A 278 AAVEVLDNLP--IMEVPQAEALLKKQQFSYSEL 308 (340)
T ss_dssp HHHHHHHHSC--CCCCGGGGGGSCSCCCCHHHH
T ss_pred HHHHHHHHHH--HhhHHHHHHHhhcccccHHHH
Confidence 3456777773 488999999887776444444
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=97.01 E-value=0.0018 Score=58.41 Aligned_cols=62 Identities=18% Similarity=0.141 Sum_probs=48.2
Q ss_pred CeeEEEEEEEEecCCCC-cceeEEEeecCCCCCCCcccccccccccccCCCCeEEEEEEeccCCCeeEEcCCCcEEeeCe
Q 005782 574 RLTLGVQVDVKNVGSKD-GAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLG 652 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~-G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G 652 (677)
++.++++++|+|.|..+ +.--|.||+.. ++.+-+-+.|+||++++|+|.+.+ . .+|
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyvng---------~~v~t~~v~La~G~s~tv~f~~~~-~-------------~~G 88 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYING---------TLYKNWTVSLGPKEEKVLTFNWTP-T-------------QEG 88 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEETT---------EEEEEEEEEECTTCEEEEEEEECC-S-------------SCE
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEECC---------EEEeeEEeccCCCCeEEEEEEEEc-C-------------CCc
Confidence 46799999999999875 67789999954 234444567999999999999987 4 367
Q ss_pred EEEEEE
Q 005782 653 EHNIHI 658 (677)
Q Consensus 653 ~y~i~v 658 (677)
.|.|.+
T Consensus 89 ~~~v~A 94 (127)
T 3idu_A 89 MYRINA 94 (127)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776665
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.29 E-value=0.014 Score=51.57 Aligned_cols=63 Identities=11% Similarity=0.209 Sum_probs=50.2
Q ss_pred CeeEEEEEEEEecCCC-CcceeEEEeecCCCCCCCccccccccccc-ccCCCCeEEEEEEeccCCCeeEEcCCCcEEeeC
Q 005782 574 RLTLGVQVDVKNVGSK-DGAHTLLVFSTPPAGHWAPHKQLVAFEKV-HVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPL 651 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~-~G~eVvQlYv~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~ 651 (677)
++.++++++|+|.|.. ++.-.|-+|+.. .+.+.+.+ .|.+|++++|+|++.+ . + ++
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly~~g---------~~v~t~~v~~LaaG~s~tv~~~w~~-~--------~----~~ 75 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLLVDG---------IVVDTQTVTSLESENSTNVDFHWTL-D--------G----TA 75 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEEETT---------EEEEEEEESCBCBTCEEEEEEEEEC-C--------C----SC
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEEECC---------EEEcceecccccCCCEEEEEEEEee-c--------C----cC
Confidence 4679999999999975 577889999864 46666777 5999999999998876 2 0 36
Q ss_pred eEEEEEE
Q 005782 652 GEHNIHI 658 (677)
Q Consensus 652 G~y~i~v 658 (677)
|.|+|.+
T Consensus 76 G~ytl~a 82 (114)
T 2l0d_A 76 NSYTLTV 82 (114)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 8888876
No 14
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=95.15 E-value=0.028 Score=50.14 Aligned_cols=57 Identities=16% Similarity=0.231 Sum_probs=41.2
Q ss_pred CeeEEEEEEEEecCCC-CcceeEEEeecCCCCCCCccccccccccc-ccCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGSK-DGAHTLLVFSTPPAGHWAPHKQLVAFEKV-HVPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~-~G~eVvQlYv~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~ 634 (677)
++.++++++|+|.|.. ++.--|.+|+..|..... +.|-..| .|+||++.+++|++..
T Consensus 15 g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~----~vgt~tv~~LaaG~s~t~~v~~~~ 73 (122)
T 2kut_A 15 GEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGV----EIGRDTISRIPVGGTGLARVQWKA 73 (122)
T ss_dssp TCEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCC----CCBCCCCSCBCTTCEEECCEEEEC
T ss_pred CCeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCe----EEeeEEccccCCCCeEEEEEEEec
Confidence 4689999999999976 566779999998653222 2333335 5999999996555553
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=91.83 E-value=0.7 Score=40.88 Aligned_cols=69 Identities=12% Similarity=0.134 Sum_probs=47.6
Q ss_pred CeeEEEEEEEEecCCCC-------cceeEEEeecCCCC--C-----CCcccccccccccccCCCCeEEEEEEeccCCCee
Q 005782 574 RLTLGVQVDVKNVGSKD-------GAHTLLVFSTPPAG--H-----WAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLS 639 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~-------G~eVvQlYv~~~~~--~-----~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls 639 (677)
++.+.+.++|+|.|+.+ |.. ..+.|.+..+ + .+---+ .+..+.|+|||+.+.+++++.
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~-~Df~v~d~~G~~VwrwS~~~~FtQ--a~~~~tl~pGE~~~f~~~w~~----- 88 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQK-FELVVYDSEHKERYRYSKEKMFTQ--AFQNLTLESGETYDFSDVWKE----- 88 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCC-EEEEEECTTCCEEEETTTTCCCCC--CCEEEEECTTCEEEEEEEESS-----
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCE-EEEEEECCCCCEEEEccccchhhh--hhceEEECCCCEEEEEEEeCC-----
Confidence 35799999999999853 322 3455555433 1 122222 667888999999999999982
Q ss_pred EEcCCCcEEeeCeEEEEEE
Q 005782 640 VVDRSGTRRIPLGEHNIHI 658 (677)
Q Consensus 640 ~~d~~~~~~~e~G~y~i~v 658 (677)
.++||.|++.+
T Consensus 89 --------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 --------VPEPGTYEVKV 99 (120)
T ss_dssp --------CCCSEEEEEEE
T ss_pred --------CCCCccEEEEE
Confidence 35799999875
No 16
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=84.98 E-value=1.5 Score=36.94 Aligned_cols=51 Identities=22% Similarity=0.272 Sum_probs=31.5
Q ss_pred EEEEEEEEecCCCCcceeEEEeecCCCCCCCc-----ccccccc-------cccccCCCCeEEEEEE
Q 005782 577 LGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 631 (677)
Q Consensus 577 ~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 631 (677)
-+++++|+|||+|+ +|+=-+.......| ...-.|| .-|..+||++++|++.
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 46899999999997 88743332211111 1111122 3466789999999874
No 17
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=83.96 E-value=2.4 Score=47.59 Aligned_cols=100 Identities=16% Similarity=0.138 Sum_probs=62.5
Q ss_pred cccccccccccCceeecccCCceeeccCCCCCCcccccccccccccccccCCCeeEEEEEEEEecCC--CCcceeEEEee
Q 005782 522 VYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGS--KDGAHTLLVFS 599 (677)
Q Consensus 522 lypFG~GLSYT~F~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V~NtG~--~~G~eVvQlYv 599 (677)
+|..|.|+.|..|..+.+...... ... +.+. .. .+++.+|+++|+|.+. ++|.+++ ||+
T Consensus 338 ~ye~~~~i~~~~~~~~~l~~~~~~-~~~-------------~~~~--~~--~g~~~~~~~~vtn~~~~~~~~~~~~-~~~ 398 (601)
T 1w8o_A 338 LYEPGTGIRYANFNLAWLGGICAP-FTI-------------PDVA--LE--PGQQVTVPVAVTNQSGIAVPKPSLQ-LDA 398 (601)
T ss_dssp EECCSSEEEEEEECHHHHTBCSCC-EEC-------------CCEE--EC--TTCEEEEEEEEECCSSSCBSSCEEE-EEC
T ss_pred EEecCCcceEEEecHHHhccccCC-CcC-------------ccce--ec--CCceeEEEEEEECCCceeccCceEE-Eec
Confidence 466667888888887776621100 000 0000 01 1357899999999976 7898877 888
Q ss_pred cCCCCCCCcccccccccccccCCCCeEEEEEEeccCCCeeEEcCCCcEEeeCeEEEEEEe
Q 005782 600 TPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIG 659 (677)
Q Consensus 600 ~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG 659 (677)
..-..... .-..++||++.++.|+|.. .+- +++|.|.+.+.
T Consensus 399 ~~~~~~~~--------~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~ 439 (601)
T 1w8o_A 399 SPDWQVQG--------SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGAT 439 (601)
T ss_dssp CTTSEEEE--------EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEE
T ss_pred CCCcEEec--------cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEE
Confidence 43322111 2367889999999888887 331 45778777665
No 18
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=80.93 E-value=2.5 Score=44.29 Aligned_cols=63 Identities=19% Similarity=0.083 Sum_probs=35.1
Q ss_pred eeEEEEEEEEecCCCCc------------ceeEEEeecC---CCC-C--CCcccccccccccccCCCCeEEEEEEeccCC
Q 005782 575 LTLGVQVDVKNVGSKDG------------AHTLLVFSTP---PAG-H--WAPHKQLVAFEKVHVPAGAQQRVGINIHVCK 636 (677)
Q Consensus 575 ~~~~v~v~V~NtG~~~G------------~eVvQlYv~~---~~~-~--~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~ 636 (677)
+...|.++|||+|+.+= .+.++++-.. +.. + .+..-.+..| +.|+||||.+++|.|....
T Consensus 36 ~~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~y 113 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLY 113 (343)
T ss_dssp SCCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTB
T ss_pred CCeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhcc
Confidence 35789999999998541 1223333111 000 0 0100012232 4589999999999997534
Q ss_pred Cee
Q 005782 637 YLS 639 (677)
Q Consensus 637 ~ls 639 (677)
+|+
T Consensus 114 dLs 116 (343)
T 2x3c_A 114 DMS 116 (343)
T ss_dssp TCC
T ss_pred ccC
Confidence 554
No 19
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=80.66 E-value=2.6 Score=37.00 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=32.1
Q ss_pred eEEEEEEEEecCCCCcceeEEEeecCCCCCCCc-----ccccccc-------cccccCCCCeEEEEEE
Q 005782 576 TLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 631 (677)
Q Consensus 576 ~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 631 (677)
.-+++++|+|||+|+ ||+=-|...-...| ...-.|| .-|..+||++++|++.
T Consensus 25 r~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 25 REKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp SCEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CcEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 346899999999997 88744433221111 1111222 3466789999999875
No 20
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=80.66 E-value=2.6 Score=37.00 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=32.1
Q ss_pred eEEEEEEEEecCCCCcceeEEEeecCCCCCCCc-----ccccccc-------cccccCCCCeEEEEEE
Q 005782 576 TLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 631 (677)
Q Consensus 576 ~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 631 (677)
.-+++++|+|||+|+ ||+=-|...-...| ...-.|| .-|..+||++++|++.
T Consensus 25 r~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 25 REKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp SCEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CcEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 346899999999997 88744433221111 1111222 3466789999999875
No 21
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=79.56 E-value=3 Score=37.23 Aligned_cols=56 Identities=14% Similarity=0.130 Sum_probs=31.3
Q ss_pred EEEEEEEecCCCC----cceeEEEeecCCCC------CCC------ccccccc-ccccccCCCCeEEEEEEec
Q 005782 578 GVQVDVKNVGSKD----GAHTLLVFSTPPAG------HWA------PHKQLVA-FEKVHVPAGAQQRVGINIH 633 (677)
Q Consensus 578 ~v~v~V~NtG~~~----G~eVvQlYv~~~~~------~~~------P~k~L~g-F~kv~L~pGes~~V~~~l~ 633 (677)
+|+|+++|+|+.. +.++|-.=-..+.. ... |...-+. +.-..|.|||+.+|+|+.+
T Consensus 28 ~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 28 EFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKFKVS 100 (129)
T ss_dssp EEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEEEGG
T ss_pred EEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEEecc
Confidence 5788999999987 77766431111000 000 1000000 1122479999999999986
No 22
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=78.14 E-value=5.3 Score=35.49 Aligned_cols=55 Identities=18% Similarity=0.315 Sum_probs=34.6
Q ss_pred EEEEEEEecCCCC----cceeEEEeecCCCCC------CCccc--------ccccccccccCCCCeEEEEEEec
Q 005782 578 GVQVDVKNVGSKD----GAHTLLVFSTPPAGH------WAPHK--------QLVAFEKVHVPAGAQQRVGINIH 633 (677)
Q Consensus 578 ~v~v~V~NtG~~~----G~eVvQlYv~~~~~~------~~P~k--------~L~gF~kv~L~pGes~~V~~~l~ 633 (677)
+|+++++|+|+.+ |.++|-.=-.+.... ..|.. +...-.++ |.|||+.+|+|+.+
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~-l~pGes~~vtf~~~ 100 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKL-IGSGEKDSVTFDVS 100 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCC-BCTTCEEEEEEEGG
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccce-eCCCcEEEEEEeCc
Confidence 6889999999998 999887621111110 01111 11122222 89999999999987
No 23
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=77.25 E-value=5.6 Score=41.40 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=37.0
Q ss_pred CeeEEEEEEEEecCCCCcceeEEE---------eecCCCC--CCCcccccccccccc------cCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGSKDGAHTLLV---------FSTPPAG--HWAPHKQLVAFEKVH------VPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~G~eVvQl---------Yv~~~~~--~~~P~k~L~gF~kv~------L~pGes~~V~~~l~~ 634 (677)
+.+++++++|||.|+.+ |+| |+..... ...-..+|.+.+... |+||||++|+++...
T Consensus 263 gR~l~~~~~VtN~g~~p----vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 263 GRAMRMKLTITNHGNSP----IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp CSEEEEEEEEEECSSSC----EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEEcCCCCc----eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 46899999999998753 554 3332111 122344666554432 899999999999864
No 24
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.85 E-value=3.9 Score=34.92 Aligned_cols=62 Identities=16% Similarity=0.142 Sum_probs=37.5
Q ss_pred eeEEEEEEEEecCCCCcceeEEEeecCCCCCCCcccccccccccccCCCCeEEEEEEeccCCCeeEEc
Q 005782 575 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVD 642 (677)
Q Consensus 575 ~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d 642 (677)
...+.+++++|+|+....--. ....... ...--.-..+-.|+||++.+|++++.+ +....|+
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~----~~~~~~~-~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~ 87 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNM----TPPTSAL-GACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFE 87 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEE----CCCSSHH-HHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEE
T ss_pred CEEEEEEEEEECCcceEEEEE----ecCCccc-cCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEE
Confidence 356789999999997543211 1111100 000001234557899999999999999 6566665
No 25
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.79 E-value=3.7 Score=35.95 Aligned_cols=60 Identities=12% Similarity=0.165 Sum_probs=40.0
Q ss_pred eeEEEEEEEEecCCCCcceeEEEeecCCCCCCCcccccccccccccCCCCeEEEEEEeccCCCeeEEcCCC
Q 005782 575 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 645 (677)
Q Consensus 575 ~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~ 645 (677)
..-+.++.|+|+|+.+++--.+ ...+. ...|. +-.|+|||+.+|+++..+ .....|+..-
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~--~~~~F-~i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~~l 100 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIK--TCRPF-SIEPA-------IGTLNVGESMQLEVEFEP-QSVGDHSGRL 100 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEE--CCTTE-EEESS-------EEEECTTCEEEEEEEECC-SSSBCCCCBC
T ss_pred CeEEEEEEEEECCCCCEEEEEe--cCCCe-EEECC-------cCEECCCCEEEEEEEEEc-CCCccEEEEE
Confidence 3467899999999987764332 11111 12232 356899999999999999 5666665433
No 26
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=72.45 E-value=8.4 Score=34.25 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=36.4
Q ss_pred EEEEEEEecCCCC----cceeEEEeecCC---------CCCC---Cccc--ccccccccccCCCCeEEEEEEec---cCC
Q 005782 578 GVQVDVKNVGSKD----GAHTLLVFSTPP---------AGHW---APHK--QLVAFEKVHVPAGAQQRVGINIH---VCK 636 (677)
Q Consensus 578 ~v~v~V~NtG~~~----G~eVvQlYv~~~---------~~~~---~P~k--~L~gF~kv~L~pGes~~V~~~l~---~~~ 636 (677)
+|+|+++|+|... +.++|-.=-... .... -|.. +..+-.+ .|.|||+.+|+|+.+ +..
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~-~l~pGet~svtf~~~~l~~G~ 106 (128)
T 1nwp_A 28 TFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTK-VIGAGEKDSVTFDVSKLAAGE 106 (128)
T ss_dssp EEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECC-CBCTTCEEEEEEEGGGSCTTS
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeee-eeCCCCEEEEEEeccccCCCc
Confidence 5789999999987 777664210000 0000 0100 0111122 489999999999985 322
Q ss_pred CeeEEcC
Q 005782 637 YLSVVDR 643 (677)
Q Consensus 637 ~ls~~d~ 643 (677)
+..||-.
T Consensus 107 ~Y~f~C~ 113 (128)
T 1nwp_A 107 KYGFFCS 113 (128)
T ss_dssp CEEEECC
T ss_pred eEEEEEC
Confidence 4777754
No 27
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=68.29 E-value=4.7 Score=37.69 Aligned_cols=24 Identities=4% Similarity=0.014 Sum_probs=17.3
Q ss_pred ccCCCCeEEEEEEec---cCCCeeEEcC
Q 005782 619 HVPAGAQQRVGINIH---VCKYLSVVDR 643 (677)
Q Consensus 619 ~L~pGes~~V~~~l~---~~~~ls~~d~ 643 (677)
.|.|||+.+|+|+++ + -.+.||-.
T Consensus 125 ~l~pGet~svtf~~~~lkp-G~Y~f~Ct 151 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLAD-GDYKFACT 151 (167)
T ss_dssp CBCTTCEEEEEECGGGGTT-SCEEEECC
T ss_pred eeCCCCEEEEEEecCCCCC-cEEEEEcC
Confidence 479999999999975 3 23555543
No 28
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=68.27 E-value=12 Score=33.26 Aligned_cols=63 Identities=8% Similarity=0.135 Sum_probs=36.1
Q ss_pred EEEEEEEecCCCC----cceeEEEeecCCC-------------C-C--CCcccccccccccccCCCCeEEEEEEec---c
Q 005782 578 GVQVDVKNVGSKD----GAHTLLVFSTPPA-------------G-H--WAPHKQLVAFEKVHVPAGAQQRVGINIH---V 634 (677)
Q Consensus 578 ~v~v~V~NtG~~~----G~eVvQlYv~~~~-------------~-~--~~P~k~L~gF~kv~L~pGes~~V~~~l~---~ 634 (677)
+|+|+++|+|... +.++|-.=-.... . . ..| +.| +....|.|||+.+|+|+.+ +
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~-~~~--~~t~~l~pGes~~vtf~~~~l~~ 103 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDE-RVI--AHTSVIGGGETDSVTFDVSKLKE 103 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCT-TEE--EECCCBCTTCEEEEEEESSCCCT
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccc-hhh--ccceeeCCCCEEEEEEeccccCC
Confidence 5789999999987 7887632100000 0 0 001 111 1122479999999999985 3
Q ss_pred CCCeeEEcC
Q 005782 635 CKYLSVVDR 643 (677)
Q Consensus 635 ~~~ls~~d~ 643 (677)
..+..||-.
T Consensus 104 G~~Y~f~C~ 112 (128)
T 2iaa_C 104 GEDYAFFCS 112 (128)
T ss_dssp TCCEEEECC
T ss_pred CceEEEEEC
Confidence 124666654
No 29
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=66.53 E-value=13 Score=33.01 Aligned_cols=63 Identities=11% Similarity=0.154 Sum_probs=35.7
Q ss_pred EEEEEEEecCCCC----cceeEEEeecCCCC--------------C--CCcccccccccccccCCCCeEEEEEEec---c
Q 005782 578 GVQVDVKNVGSKD----GAHTLLVFSTPPAG--------------H--WAPHKQLVAFEKVHVPAGAQQRVGINIH---V 634 (677)
Q Consensus 578 ~v~v~V~NtG~~~----G~eVvQlYv~~~~~--------------~--~~P~k~L~gF~kv~L~pGes~~V~~~l~---~ 634 (677)
+|+|+++|+|+.. +.++|-.=-..... . ..+ +.| +.-..|.|||+.+|+|+.+ +
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~t~~l~pGet~svtf~~~~l~~ 104 (129)
T 2ccw_A 28 QFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDT-RVI--AHTKVIGGGESDSVTFDVSKIAA 104 (129)
T ss_dssp EEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCT-TEE--EECCCBCTTCEEEEEEEGGGSCT
T ss_pred EEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccc-cce--eeeeEECCCCEEEEEEeccccCC
Confidence 5789999999987 77766321000000 0 001 011 1122479999999999986 2
Q ss_pred CCCeeEEcC
Q 005782 635 CKYLSVVDR 643 (677)
Q Consensus 635 ~~~ls~~d~ 643 (677)
..+..||-.
T Consensus 105 G~~Y~f~C~ 113 (129)
T 2ccw_A 105 GENYAYFCS 113 (129)
T ss_dssp TCCEEEECC
T ss_pred CceEEEEeC
Confidence 123666654
No 30
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=61.81 E-value=9.2 Score=36.84 Aligned_cols=51 Identities=20% Similarity=0.092 Sum_probs=31.3
Q ss_pred EEEEEEEEecCCCCcceeEEEeecCCCCCCCc-----ccccccc-------cccccCCCCeEEEEEE
Q 005782 577 LGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 631 (677)
Q Consensus 577 ~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 631 (677)
-+++++|+|||+|+ ||+=-+...-...| ...=.|| .-|..+||++++|++.
T Consensus 125 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 187 (225)
T 3qga_A 125 EITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLI 187 (225)
T ss_dssp CCEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEE
Confidence 35799999999997 88744433221111 1111122 3456789999999875
No 31
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=61.29 E-value=8.5 Score=37.39 Aligned_cols=51 Identities=22% Similarity=0.173 Sum_probs=31.7
Q ss_pred EEEEEEEecCCCCcceeEEEeecCCCCCCCc-----ccccccc-------cccccCCCCeEEEEEEe
Q 005782 578 GVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGINI 632 (677)
Q Consensus 578 ~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~l 632 (677)
+++++|+|||+|+ ||+=-+...-...| ...=.|| .-|..+||++++|++.=
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5789999999997 88744433221111 1111222 34667899999998753
No 32
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=55.22 E-value=11 Score=37.10 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=33.0
Q ss_pred EEEecCCCCcceeEEEeecCCCCC--CC--------cccccccccccccCCCCeEEEEEEecc
Q 005782 582 DVKNVGSKDGAHTLLVFSTPPAGH--WA--------PHKQLVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 582 ~V~NtG~~~G~eVvQlYv~~~~~~--~~--------P~k~L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
++.|.|. |.=+|+||.+.+... .. -.+.+..+.++.|.||||-| |.+
T Consensus 130 diinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT----l~P 186 (246)
T 3kmh_A 130 DIINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC----LPP 186 (246)
T ss_dssp EEEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE----ECT
T ss_pred cEEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe----cCC
Confidence 3456554 567788888876531 11 24678889999999999855 666
No 33
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=54.86 E-value=19 Score=37.90 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=34.3
Q ss_pred CeeEEEEEEEEecCCCCcceeEEE--eec----CCCC-----CCCcccc------cccccccccCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGSKDGAHTLLV--FST----PPAG-----HWAPHKQ------LVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~G~eVvQl--Yv~----~~~~-----~~~P~k~------L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
+.+++++++|||.|+.+ ||| |.. +.+. ...-..+ |. =.. -|+||||++|++++..
T Consensus 297 gR~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 297 GRELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp SSEEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeeh
Confidence 46899999999998754 443 211 1111 1111223 34 334 6999999999999874
No 34
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=51.26 E-value=36 Score=30.08 Aligned_cols=17 Identities=6% Similarity=-0.050 Sum_probs=14.0
Q ss_pred ccccCCCCeEEEEEEec
Q 005782 617 KVHVPAGAQQRVGINIH 633 (677)
Q Consensus 617 kv~L~pGes~~V~~~l~ 633 (677)
...|.|||+.+++|+.+
T Consensus 98 t~~l~pGet~~v~f~~~ 114 (139)
T 2aan_A 98 SPLANGNETVEVTFTAP 114 (139)
T ss_dssp CCCBCTTCEEEEEEECC
T ss_pred ccccCCCCEEEEEEECC
Confidence 44589999999999875
No 35
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=51.08 E-value=43 Score=33.11 Aligned_cols=59 Identities=10% Similarity=0.013 Sum_probs=38.2
Q ss_pred CeeEEEEEEEEecCCCCcceeEEEeecCCCC-CCCcccccccccccccCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGSKDGAHTLLVFSTPPAG-HWAPHKQLVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~-~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
++.+.+.++|-|..+..-+--|+|...+... ...+... --+++.|+||++++|.|.|.+
T Consensus 95 GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~--~~~~v~v~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 95 NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQR--YRQQFPIKALSSRAVPFVIVP 154 (252)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCC--EEEEEEECTTEEEEEEEEEEE
T ss_pred CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCc--eEEEEEECCCCeEEEEEEEEe
Confidence 4679999999998876655445554433221 1111111 113467999999999999987
No 36
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=50.69 E-value=31 Score=33.30 Aligned_cols=52 Identities=13% Similarity=0.173 Sum_probs=34.1
Q ss_pred eeEEEEEEEEecCCCCcceeEEEeecCCCCCCCcccccccccccccCCCCeEEEEEEecc
Q 005782 575 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 575 ~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
...+.+++++|+|+..-.= ..+-.+. +-..| .+.|-.|+|||+.+|+++++.
T Consensus 134 ~~~~~~f~i~N~G~~pL~I-~~v~~sc--gct~~-----~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRL-HSVTTRN--PALTA-----VPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCEEE-EEEEECS--TTEEE-----EESCSEECTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCEEE-EEEEeCC--CCEee-----ecCCccCCCCCEEEEEEEEec
Confidence 4577899999999875331 1221111 11112 245777999999999999998
No 37
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=50.33 E-value=11 Score=44.85 Aligned_cols=59 Identities=24% Similarity=0.313 Sum_probs=38.4
Q ss_pred eeEEEEEEEEecCCCCcceeEEEeecC--CCCC---CCcccccccc--cccccCCCCeEEEEEEecc
Q 005782 575 LTLGVQVDVKNVGSKDGAHTLLVFSTP--PAGH---WAPHKQLVAF--EKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 575 ~~~~v~v~V~NtG~~~G~eVvQlYv~~--~~~~---~~P~k~L~gF--~kv~L~pGes~~V~~~l~~ 634 (677)
..++++++|+|+|+.+...+.++-+.. +... ..|. .|.-+ .++.|+|||+++++++++.
T Consensus 499 ~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 499 DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 367889999999987654444433321 2221 2343 34322 4578999999999999986
No 38
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=46.36 E-value=49 Score=30.07 Aligned_cols=54 Identities=19% Similarity=0.070 Sum_probs=27.2
Q ss_pred EEEEEEEecCCCCcceeEEEeecCCCCCCCccc-ccccccc--cccCCCC--eEEEEEEe
Q 005782 578 GVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHK-QLVAFEK--VHVPAGA--QQRVGINI 632 (677)
Q Consensus 578 ~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k-~L~gF~k--v~L~pGe--s~~V~~~l 632 (677)
+|+++++|.|+.....++..=...+... -|.. ....... ..|.||| +.+++|++
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYAV-MPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCCS-SCCCCSEEEEBCCCCCCBTTBEEEEEEEECC
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchhc-cccccccccccccccccCCCCceEEEEEEEE
Confidence 6889999986544555554311111110 0110 0111111 1679999 77777776
No 39
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=45.03 E-value=1.3e+02 Score=28.75 Aligned_cols=50 Identities=16% Similarity=0.127 Sum_probs=31.2
Q ss_pred eeEEEEEEEEecCCCCcceeEEEeecCCCCCCCcccccccc-cccccCCCCeEEEEEEecc
Q 005782 575 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAF-EKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 575 ~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~ 634 (677)
+..+.+++++|+|+.+=.=. ++ +.|.- ++.- .-..|+|||+.+++|+++.
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~-~~--~~p~~-------~~~~~~~~~I~PG~~g~I~vt~~~ 69 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVA-VV--SLPSF-------VSLDDRAFRLQAREPRELNLSLAV 69 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEE-EE--ECCTT-------EECSCCEEEECSSSCEEEEEEECC
T ss_pred CcceEEEEEEeCCCCceEEE-ec--cCCCc-------eEeeeCcceeCCCCceEEEEEEcc
Confidence 34567999999999754321 11 11111 1110 1245899999999999997
No 40
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=44.09 E-value=56 Score=29.20 Aligned_cols=56 Identities=9% Similarity=0.007 Sum_probs=33.2
Q ss_pred eEEEEEEEEecCCCCcceeEEEeecCCCCCCCccccccc-ccccccCCCCeEEEEEEecc
Q 005782 576 TLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVA-FEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 576 ~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k~L~g-F~kv~L~pGes~~V~~~l~~ 634 (677)
..+-+++|+|||.+.-.--.+ ..+.........|.= =.+-.|+|||+.+|++++..
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~---~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFI---PKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEE---CCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccceEEEEe---cCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 457799999999987653332 111111000000110 02447999999999999986
No 41
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=42.78 E-value=43 Score=31.75 Aligned_cols=53 Identities=21% Similarity=0.168 Sum_probs=35.9
Q ss_pred hhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh-----hCCCCEEEEEecC
Q 005782 373 QLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM-----ASKGPTILVLMSG 436 (677)
Q Consensus 373 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~-----~~~~pvVvVl~~g 436 (677)
+.+.+..+..++||.+|++.-+. +..+|+.-..+|+.+.. -.+||+.++..+|
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP~Y-----------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsg 119 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTPEY-----------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASP 119 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECS
T ss_pred HHHHHHHHHHHhCCEEEEEcCcc-----------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCC
Confidence 45667788889999888876322 45688888889998864 1345555444443
No 42
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=39.94 E-value=35 Score=39.46 Aligned_cols=57 Identities=18% Similarity=0.058 Sum_probs=41.9
Q ss_pred CeeEEEEEEEEecCCCCcceeEEEeecCCCCC-CCcccccccccccccCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
++.+.+.++|.|..+...+-.|+|...++... ..+.. -+++.|+||+++.|.|.|.+
T Consensus 167 GD~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~----~~~~~v~a~~~~~v~f~i~~ 224 (767)
T 4fxk_B 167 FEQLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGL----AQQVLVPAGSARPVAFSVVP 224 (767)
T ss_dssp TCEEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCC----CEEEEECSSCEEECCEEEEE
T ss_pred CCEEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCce----eEEEEEcCCCeEEEEEEEEE
Confidence 46899999999999888887788766544321 11111 14567999999999999987
No 43
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=38.59 E-value=65 Score=32.03 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=34.6
Q ss_pred EEEEEEEecCCCCcceeEEEeecCCCCCCCcccc---ccccccc-ccCCCCeEEEEEEec
Q 005782 578 GVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQ---LVAFEKV-HVPAGAQQRVGINIH 633 (677)
Q Consensus 578 ~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k~---L~gF~kv-~L~pGes~~V~~~l~ 633 (677)
.++++|+|+|+. .-.||..+.+......|... +.--=-+ .|+||+++.|+|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 589999999986 68999999764321112111 1111112 489999999998643
No 44
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=37.39 E-value=55 Score=28.68 Aligned_cols=65 Identities=11% Similarity=0.129 Sum_probs=42.7
Q ss_pred cccccccccccccCCCCeEEEEEEeccCCC------------eeEEcCCCcE-------EeeCeEEEEEE---eCCCceE
Q 005782 608 PHKQLVAFEKVHVPAGAQQRVGINIHVCKY------------LSVVDRSGTR-------RIPLGEHNIHI---GGTKHSV 665 (677)
Q Consensus 608 P~k~L~gF~kv~L~pGes~~V~~~l~~~~~------------ls~~d~~~~~-------~~e~G~y~i~v---G~ss~~~ 665 (677)
|--.+..-.|..|.||||.+|++-+.. -| ...++-.|.| -.-||+|.=.| |.++..+
T Consensus 48 pDLtvisiDk~vL~PGESA~it~IvKD-id~nPIn~v~i~~~~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~i 126 (146)
T 2lv4_A 48 PDLTVMSIDKSVLSPGESATITTIVKD-IDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERI 126 (146)
T ss_dssp GGGCEEECCCCCBCTTCEEEEEEECBB-TTSCBCCCCCCBCCEECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCEE
T ss_pred CCcEEEecCccccCCCcceEEEEEEEe-CCCCcccceeeeeeeeccccccceeecceecCCCCcceEEEEEEcCCCCceE
Confidence 455566778889999999999987643 12 1112222445 33589997654 7788888
Q ss_pred EEEEEeec
Q 005782 666 SLHAATLG 673 (677)
Q Consensus 666 ~~~~~~~~ 673 (677)
.+..+-.|
T Consensus 127 ~l~yky~g 134 (146)
T 2lv4_A 127 DISFKYAM 134 (146)
T ss_dssp EEEEECST
T ss_pred EEEeeeee
Confidence 88876444
No 45
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=36.52 E-value=43 Score=28.90 Aligned_cols=16 Identities=13% Similarity=0.073 Sum_probs=11.8
Q ss_pred cE--Ee-eCeEEEEEEeCC
Q 005782 646 TR--RI-PLGEHNIHIGGT 661 (677)
Q Consensus 646 ~~--~~-e~G~y~i~vG~s 661 (677)
.| ++ +.|+|+|.|...
T Consensus 77 ~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 77 QWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCEEECSSCC-CEEEEECC
T ss_pred eEEEEecCCCcEEEEEEec
Confidence 68 55 499999999854
No 46
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=36.11 E-value=56 Score=31.12 Aligned_cols=55 Identities=16% Similarity=0.199 Sum_probs=37.3
Q ss_pred hHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHhh---------------CCCCEEEEEecCce
Q 005782 374 LFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMA---------------SKGPTILVLMSGGP 438 (677)
Q Consensus 374 ~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~---------------~~~pvVvVl~~g~P 438 (677)
.+.+..+..+.||.+|++.=.. +..+|+.-..+|+.+... .+|+++++..+|+|
T Consensus 82 ~~~~~~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~ 150 (211)
T 3p0r_A 82 VADKYLNQFLEADKVVFGFPLW-----------NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGV 150 (211)
T ss_dssp HHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSC
T ss_pred HHHHHHHHHHhCCEEEEEcChh-----------cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCC
Confidence 3556677889999888776322 456788888899888531 24566666666666
Q ss_pred e
Q 005782 439 I 439 (677)
Q Consensus 439 ~ 439 (677)
|
T Consensus 151 ~ 151 (211)
T 3p0r_A 151 Y 151 (211)
T ss_dssp C
T ss_pred C
Confidence 4
No 47
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=34.78 E-value=79 Score=30.54 Aligned_cols=53 Identities=19% Similarity=0.080 Sum_probs=34.1
Q ss_pred EEEEEEEecCCCCcceeEEEeecCCCCC---CCcccccccccccccCCCCeEEEEEEecc
Q 005782 578 GVQVDVKNVGSKDGAHTLLVFSTPPAGH---WAPHKQLVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 578 ~v~v~V~NtG~~~G~eVvQlYv~~~~~~---~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
.++++|+|+|+. --.||..|.+.... ..|..-.=-. ..|+||+.+.|+|....
T Consensus 29 ~~sl~l~N~~~~--p~LvQswv~~~~~~~~~~~pFivtPPl--~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDY--PVLIQSRIYDENKEKESEDPFVVTPPL--FRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSS--CEEEEEEEECTTSCCCSSCSEEEESSE--EEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCC--CEEEEEEEecCCCCccccCCEEECCCe--EEeCCCCceEEEEEecC
Confidence 578999999976 47999999654321 1121100000 24789999999997653
No 48
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=34.68 E-value=43 Score=28.22 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=25.4
Q ss_pred EEEEEEEecCCCCcceeEEEeecCCCCCCCcccccccccccccCCCCeEEEEEEec
Q 005782 578 GVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIH 633 (677)
Q Consensus 578 ~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~ 633 (677)
+|++.++|.+.. ... +.+.. + |+ +..+.|||+.+++|+.+
T Consensus 47 ~V~~~~~n~d~~-~H~---~~i~~----------~-~~-~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 47 AVKVVVENKSPI-SEG---FSIDA----------F-GV-QEVIKAGETKTISFTAD 86 (112)
T ss_dssp EEEEEEEECSSS-CEE---EEEGG----------G-TE-EEEECTTCEEEEEEECC
T ss_pred EEEEEEEECCCC-eEE---EEEcC----------C-Cc-eeEeCCCCEEEEEEECC
Confidence 578888998764 111 11111 1 22 56789999999999764
No 49
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=34.55 E-value=61 Score=30.34 Aligned_cols=39 Identities=21% Similarity=0.282 Sum_probs=28.1
Q ss_pred hHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh
Q 005782 374 LFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM 423 (677)
Q Consensus 374 ~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~ 423 (677)
.+.+..+...+||.+|++.=.. ...+|+.-..+|+.+..
T Consensus 84 ~~~~~~~~l~~aD~iv~~~P~y-----------~~~~pa~lK~~iD~~~~ 122 (208)
T 2hpv_A 84 RFNELTDQFLSADKVVIANPMW-----------NLNVPTRLKAWVDTINV 122 (208)
T ss_dssp HHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCEEEEEeccc-----------cCCCCHHHHHHHHHHhc
Confidence 4556677788999888775321 35678888889998863
No 50
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=33.58 E-value=58 Score=30.57 Aligned_cols=54 Identities=13% Similarity=0.117 Sum_probs=37.8
Q ss_pred hHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh---------------hCCCCEEEEEecCce
Q 005782 374 LFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM---------------ASKGPTILVLMSGGP 438 (677)
Q Consensus 374 ~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~---------------~~~~pvVvVl~~g~P 438 (677)
.+.+..+..++||.+|++.=.. +..+|+.-..+|+.+.. ..+|+++++..+|+|
T Consensus 63 ~~~~~~~~l~~AD~iV~~~P~y-----------~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~ 131 (196)
T 3lcm_A 63 EMEKYRDLVTWADHLIFIFPIW-----------WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTP 131 (196)
T ss_dssp GGHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSSC
T ss_pred HHHHHHHHHHhCCEEEEECchh-----------hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCCc
Confidence 4566677889999888775321 46688888889998842 134667777667766
No 51
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=33.47 E-value=67 Score=26.41 Aligned_cols=26 Identities=15% Similarity=0.284 Sum_probs=18.9
Q ss_pred ccccCCCCeEEEEEEeccCCCeeEEcCCCcEEeeCeEEEEEE
Q 005782 617 KVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHI 658 (677)
Q Consensus 617 kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~v 658 (677)
+..|.||++.+++|+.+. +|.|.++.
T Consensus 60 ~~~~~pg~~~~~~~t~~~----------------~G~Y~y~C 85 (100)
T 4hci_A 60 DVVVESGKEKNITVKPKS----------------AGTYELIC 85 (100)
T ss_dssp EEEECTTCEEEEEECCCS----------------CEEEEEEC
T ss_pred ceeecCCcceeEEEeccc----------------CceEEEEC
Confidence 345899999888877543 67777765
No 52
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=33.29 E-value=86 Score=27.52 Aligned_cols=26 Identities=15% Similarity=0.048 Sum_probs=20.2
Q ss_pred cccCCCCeEEEEEEeccCCCeeEEcCCCcEEeeCeEEEEEEe
Q 005782 618 VHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIG 659 (677)
Q Consensus 618 v~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG 659 (677)
+.|.||++.+++|+++. +|.|.++.+
T Consensus 98 ~~l~pG~~~~~~~~~~~----------------~G~y~f~C~ 123 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPA----------------PGTYLYICT 123 (140)
T ss_dssp CCBCTTEEEEEEEECCS----------------SEEEEEECC
T ss_pred eeeCCCceeEEEEEeCC----------------CeeEEEEeC
Confidence 46899999999998853 577777665
No 53
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=33.07 E-value=2e+02 Score=24.65 Aligned_cols=59 Identities=12% Similarity=-0.035 Sum_probs=40.1
Q ss_pred CeeEEEEEEEEecCCCCcceeEEEeecCCCCC-CCcccccccccccccCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
++..++++.|+|+.+.+=.=--.+|==+..+. ..|. ...++++.|.++|+.+|+..-+.
T Consensus 37 ~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~--~~~W~~l~l~~~~~~~l~~vapn 96 (112)
T 3o0l_A 37 AGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDE--GVSWKSLKLHGKQQMQVTALSPN 96 (112)
T ss_dssp GGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCT--TCCCEEEEECTTCEEEEEEECSS
T ss_pred CCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCC--CCCcEEEEECCCCeEEEEEECCC
Confidence 45789999999998766443334444455553 2333 24678889999999998876654
No 54
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=32.20 E-value=70 Score=29.49 Aligned_cols=37 Identities=8% Similarity=0.191 Sum_probs=26.0
Q ss_pred HHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHH
Q 005782 375 FGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVS 422 (677)
Q Consensus 375 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~ 422 (677)
+.+..+...+||.+|++.-.. ...+|+.-..+|+.+.
T Consensus 77 ~~~~~~~l~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~ 113 (201)
T 1t5b_A 77 SDELIAELKAHDVIVIAAPMY-----------NFNIPTQLKNYFDLIA 113 (201)
T ss_dssp HHHHHHHHHHCSEEEEECCCB-----------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEeCcc-----------cCcCCHHHHHHHHHhe
Confidence 445567788999877765321 3457888888999886
No 55
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=31.61 E-value=74 Score=30.65 Aligned_cols=38 Identities=11% Similarity=0.401 Sum_probs=28.2
Q ss_pred HHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh
Q 005782 375 FGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM 423 (677)
Q Consensus 375 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~ 423 (677)
..+..+....||.+|++.-.. +..+|+.-..+|+.+..
T Consensus 85 ~~~l~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~ 122 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLPLH-----------NFNIPSKLKDYMDNIMI 122 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------hccCCHHHHHHHHHHhh
Confidence 456677889999888776322 46678888889998864
No 56
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=30.79 E-value=1e+02 Score=32.16 Aligned_cols=57 Identities=9% Similarity=-0.030 Sum_probs=34.1
Q ss_pred eeEEEEEEEEecCCCCcceeEEEeecCCCCCCCcccccccc-cccccCCCCeEEEEEEecc
Q 005782 575 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAF-EKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 575 ~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~ 634 (677)
...+-+++|+|||.+...--. +..+.....+..-|.=. .+-.|.|||+..|++++..
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f---~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v 103 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSF---IPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 103 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEE---ECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred CeEEEEEEEEecCCceEEEEE---EeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEE
Confidence 356789999999998654322 22222111111111111 2347999999999999987
No 57
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=29.83 E-value=52 Score=38.62 Aligned_cols=52 Identities=19% Similarity=0.156 Sum_probs=32.6
Q ss_pred eEEEEEEEEecCCCCcceeEEEeecCCCCCCCcc---cccccc---------cccccCCCCeEEEEEE
Q 005782 576 TLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPH---KQLVAF---------EKVHVPAGAQQRVGIN 631 (677)
Q Consensus 576 ~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~~~P~---k~L~gF---------~kv~L~pGes~~V~~~ 631 (677)
.=.++++|+|||+|+ +|+=-|...-...|. -+.++| .-|..+|||+|+|++.
T Consensus 150 ~~~~~~~v~~~~~r~----~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 150 RKAVILKVTSKGDRP----IQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp CEEEEEEEEECCSSC----EEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CceEEEEEEeCCCCc----eEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 347899999999997 887444332212221 112222 3456789999999985
No 58
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=29.54 E-value=14 Score=37.71 Aligned_cols=55 Identities=16% Similarity=0.343 Sum_probs=33.0
Q ss_pred HhhcCCEEEEEecCCCcccccccccCCCCCCHH---HHHHHHHHHhhCCCCEEEEEecCceeec
Q 005782 381 ASRQADATILVMGLDQSIEAEALDRAGLLLPGR---QQELVSKVSMASKGPTILVLMSGGPIDV 441 (677)
Q Consensus 381 ~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~---q~~Li~~v~~~~~~pvVvVl~~g~P~~l 441 (677)
..++||+||+..|... ..|.+|.+|- ..+ -.++++++++.+++-+| ++ .+||+|.
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl-~~Na~I~~~i~~~i~~~~p~aiv-lv-vsNPvd~ 123 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLA-HKNAGIIKDIAKKIVENAPESKI-LV-VTNPMDV 123 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHH-HHHHHHHHHHHHHHHTTSTTCEE-EE-CSSSHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHH-HHHHHHHHHHHHHHHhcCCceEE-EE-ecCcchh
Confidence 4678999999988654 3444554431 111 13566777776665443 33 3569986
No 59
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=29.36 E-value=49 Score=34.16 Aligned_cols=140 Identities=12% Similarity=0.160 Sum_probs=68.6
Q ss_pred ceEEeecCCC--CCCCCCCCCCeEEEECcCCCccccccccccccCCccCCHHHHHhhceeEEEecCcCccCCC-ChhhHH
Q 005782 300 GIVLLKNQGP--SLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACA-DDQLFG 376 (677)
Q Consensus 300 sivLLKN~~~--~LPL~~~~~~kIaviGp~a~~~~~~~g~~~~~~~~~~t~~~~l~~~~~v~y~~g~~~~~~~-~~~~~~ 376 (677)
.+.|++|... -||+.. .+|++++.....+. . .+..+.+.|++.+.-.+.+-. +..|+ +..--+
T Consensus 152 ~~~vV~~~edv~~l~~~~--~~kv~~vsQTT~s~----~-------~~~~iv~~L~~r~p~i~~~~~-ntIC~AT~~RQ~ 217 (328)
T 3szu_A 152 GMYLVESPDDVWKLTVKN--EEKLSFMTQTTLSV----D-------DTSDVIDALRKRFPKIVGPRK-DDICYATTNRQE 217 (328)
T ss_dssp CEEEECSHHHHHHCCCSC--TTSEEEEECTTSCH----H-------HHHHHHHHHHHHCTTCBCCSS-CSCCHHHHHHHH
T ss_pred cEEEECCHHHHHhCCcCC--CCeEEEEEecCCcH----H-------HHHHHHHHHHHhCcccccCCC-CCcCHHHHHHHH
Confidence 5777777433 255432 35898886322111 1 112345666665421111001 11222 223334
Q ss_pred HHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHhhCCCCEEEEEecCceeecccccCCCCccEE-EE
Q 005782 377 AAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAI-IW 455 (677)
Q Consensus 377 ~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ai-L~ 455 (677)
++.++|+++|++||+-|.++ .+-.+|.+ +++..++|+..| -+..=++..|+. .+..| |.
T Consensus 218 av~~lA~~vD~miVVGg~nS---------------SNT~rL~e-ia~~~g~~ty~I-e~~~el~~~wl~---g~~~VGIT 277 (328)
T 3szu_A 218 AVRALAEQAEVVLVVGSKNS---------------SNSNRLAE-LAQRMGKRAFLI-DDAKDIQEEWVK---EVKCVGVT 277 (328)
T ss_dssp HHHHHHHHCSEEEEECCTTC---------------HHHHHHHH-HHHHTTCEEEEE-SSGGGCCHHHHT---TCSEEEEE
T ss_pred HHHHHHHhCCEEEEeCCCCC---------------chHHHHHH-HHHHhCCCEEEe-CChHHCCHHHhC---CCCEEEEe
Confidence 55678899999888654332 23455655 555556666543 333345556775 45554 44
Q ss_pred ccCCCch-hHHHHHHHHcC
Q 005782 456 AGYPGQA-GGTAIADILFG 473 (677)
Q Consensus 456 a~~~G~e-~g~AiAdvL~G 473 (677)
|.-..++ --+.+.+.|..
T Consensus 278 AGASTP~~lieeVi~~l~~ 296 (328)
T 3szu_A 278 AGASAPDILVQNVVARLQQ 296 (328)
T ss_dssp ECTTCCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHH
Confidence 5433322 23445555544
No 60
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=28.33 E-value=99 Score=28.79 Aligned_cols=41 Identities=20% Similarity=0.241 Sum_probs=30.0
Q ss_pred hhhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh
Q 005782 372 DQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM 423 (677)
Q Consensus 372 ~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~ 423 (677)
.+.+.+..+...+||.+|++.=.. +...|+.-..+|+.+..
T Consensus 55 ~~~~~~~~~~i~~AD~iV~~sP~y-----------~~~~p~~lK~~iD~~~~ 95 (192)
T 3fvw_A 55 HPEVAHAREEVQEADAIWIFSPVY-----------NYAIPGPVKNLLDWLSR 95 (192)
T ss_dssp CHHHHHHHHHHHHCSEEEEECCCB-----------TTBCCHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHhCCEEEEECccc-----------ccCCCHHHHHHHHHhhc
Confidence 345677788889999888765221 45678888899998874
No 61
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=27.04 E-value=1.1e+02 Score=28.57 Aligned_cols=40 Identities=23% Similarity=0.258 Sum_probs=29.7
Q ss_pred hhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh
Q 005782 373 QLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM 423 (677)
Q Consensus 373 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~ 423 (677)
+.+.+..+..++||.+|++.-+. +..+|+.-..+|+.+..
T Consensus 61 ~~~~~l~~~i~~AD~iv~~sP~y-----------~~~~~~~lK~~iD~~~~ 100 (193)
T 3svl_A 61 ATVEALAEQIRQADGVVIVTPEY-----------NYSVPGGLKNAIDWLSR 100 (193)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCEEEEEeccc-----------CCCCCHHHHHHHHHHhh
Confidence 45677788889999888776322 35678888889988864
No 62
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=26.46 E-value=2.9e+02 Score=30.90 Aligned_cols=79 Identities=13% Similarity=0.132 Sum_probs=46.6
Q ss_pred eeEEEEEEEEecCCCCcceeEEEeecCCCCC---CCcccccccccccccCCCCeEEEEEEeccCCCeeEEcCCCcEEeeC
Q 005782 575 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGH---WAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPL 651 (677)
Q Consensus 575 ~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~---~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~ 651 (677)
.+.+++-+|||.|..++.-.+ =+..|.++ ..|.+ |. |. +.||+++++++++. . .++.|. .
T Consensus 537 ~~~t~~rtvtnvg~~~~ty~~--~v~~p~gv~v~V~P~~-l~-f~----~~~~~~~~~vt~~~-~------~~~~~~--~ 599 (621)
T 3vta_A 537 FNQYFNRTLTSVAPQASTYRA--MISAPQGLTISVNPNV-LS-FN----GLGDRKSFTLTVRG-S------IKGFVV--S 599 (621)
T ss_dssp EEEEEEEEEEECSSSCEEEEE--EEECCSSEEEEEESSE-EE-EC----STTCEEEEEEEEEE-C------CCSSEE--E
T ss_pred eEEEEEEEEEccCCCCeEEEE--EEECCCCcEEEEecCE-EE-Ec----CCCcEEEEEEEEEe-c------CCCceE--E
Confidence 467888899999986654444 45566552 23532 32 32 57999988888764 2 234443 2
Q ss_pred eEEEEEEeCCCceEEEEEEee
Q 005782 652 GEHNIHIGGTKHSVSLHAATL 672 (677)
Q Consensus 652 G~y~i~vG~ss~~~~~~~~~~ 672 (677)
|... | .+..|.+|.-+.++
T Consensus 600 g~l~-w-~d~~h~Vr~Pi~v~ 618 (621)
T 3vta_A 600 ASLV-W-SDGVHYVRSPITIT 618 (621)
T ss_dssp EEEE-E-ECSSCCCEEEEEEE
T ss_pred EEEE-E-EcCCEEEEeCEEEE
Confidence 5443 3 34556666666554
No 63
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=26.22 E-value=70 Score=29.62 Aligned_cols=53 Identities=17% Similarity=0.107 Sum_probs=33.3
Q ss_pred hhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh-----hCCCCEEEEEecC
Q 005782 373 QLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM-----ASKGPTILVLMSG 436 (677)
Q Consensus 373 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~-----~~~~pvVvVl~~g 436 (677)
..+.+..+...+||.+|++.-.. +..+|+.-..+|+.+.. -.+||++++..+|
T Consensus 61 ~~~~~~~~~l~~aD~ii~~sP~y-----------~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~g 118 (193)
T 1rtt_A 61 PAVERFREQIRAADALLFATPEY-----------NYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASA 118 (193)
T ss_dssp HHHHHHHHHHHHCSEEEEECCEE-----------TTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECS
T ss_pred HHHHHHHHHHHhCCEEEEEcccc-----------ccCcCHHHHHHHHHhccccCcccCCCeEEEEEeCC
Confidence 45666777888999887765221 23467777888888853 2345555444443
No 64
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=26.08 E-value=87 Score=29.41 Aligned_cols=53 Identities=11% Similarity=0.093 Sum_probs=35.5
Q ss_pred hhhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh--hCCCCEEEEEec
Q 005782 372 DQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM--ASKGPTILVLMS 435 (677)
Q Consensus 372 ~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~--~~~~pvVvVl~~ 435 (677)
.+.+.+..+...+||.+|++.-.. +..+|+.-..+|+.+.. -.+||+++|..+
T Consensus 73 ~~~~~~~~~~i~~AD~ivi~sP~Y-----------~~~~~~~lK~~iD~~~~~~l~gK~~~~v~t~ 127 (191)
T 3k1y_A 73 TTKLEEITSALSASDGLVVATPVF-----------KASYTGLFKMFFDILDTDALTGMPTIIAATA 127 (191)
T ss_dssp CHHHHHHHHHHHHCSEEEEEEECB-----------TTBSCHHHHHHHHHSCTTTTTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCEEEEEcCcc-----------CCcCcHHHHHHHHHhhhhhcCCCEEEEEEeC
Confidence 356778888999999888776322 35678877788887752 235666554443
No 65
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=25.66 E-value=92 Score=28.24 Aligned_cols=38 Identities=13% Similarity=0.153 Sum_probs=25.4
Q ss_pred hHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHH
Q 005782 374 LFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVS 422 (677)
Q Consensus 374 ~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~ 422 (677)
.+++..+...+||.+|++.-.. ...+|+.-..+|+.+.
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~y-----------~~~~p~~lK~~iD~~~ 98 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPIY-----------WFGMSGTLKLFIDRWS 98 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHTHH
T ss_pred CHHHHHHHHHhCCEEEEEeCcc-----------ccCCcHHHHHHHHHhH
Confidence 3555667788999888776322 3456777777777764
No 66
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=24.82 E-value=1.1e+02 Score=36.16 Aligned_cols=59 Identities=10% Similarity=0.070 Sum_probs=40.7
Q ss_pred CeeEEEEEEEEecCC-CCcceeEEEeecCCCCCC-CcccccccccccccCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGS-KDGAHTLLVFSTPPAGHW-APHKQLVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~-~~G~eVvQlYv~~~~~~~-~P~k~L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
++.+.+.++|.|..+ .+++--|+|....+.... .+. ...=+++.|+||++++|.|.|.+
T Consensus 94 GD~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~--~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 94 NEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTK--RRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp TCCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSS--SCEEEEEEECTTEEEEEEEEEEE
T ss_pred CcEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCC--CcceeEEEECCCCeEEEEEEEEE
Confidence 468999999999988 877766666544332111 111 01114678999999999999997
No 67
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=24.58 E-value=1.4e+02 Score=29.26 Aligned_cols=52 Identities=13% Similarity=-0.005 Sum_probs=32.9
Q ss_pred EEEEEEEecCCCCcceeEEEeecCCCCC-CCcccccccccccccCCCCeEEEEEEec
Q 005782 578 GVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAFEKVHVPAGAQQRVGINIH 633 (677)
Q Consensus 578 ~v~v~V~NtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF~kv~L~pGes~~V~~~l~ 633 (677)
.++++|+|+|+. .-.||..+.+.... ..|..-.=- =..|+||+.+.|+|...
T Consensus 39 ~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPP--lfRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPP--LFRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESS--EEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCC--eEEECCCCceEEEEEEC
Confidence 468999999976 47899999764321 111100000 02478999999999654
No 68
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=24.47 E-value=39 Score=34.91 Aligned_cols=56 Identities=18% Similarity=0.328 Sum_probs=28.3
Q ss_pred HhhcCCEEEEEecCCCcccccccccCCCCCC--HHHHHHHHHHHhhCCCCEEEEEecCceeec
Q 005782 381 ASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDV 441 (677)
Q Consensus 381 ~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l 441 (677)
..++||+||++.|... .+|.+|.++--- +--.++++++.+.+++ .++++ .++|+++
T Consensus 73 a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~-a~ilv-vtNPvdi 130 (326)
T 3vku_A 73 DAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGFN-GIFLV-AANPVDI 130 (326)
T ss_dssp GGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTCC-SEEEE-CSSSHHH
T ss_pred HhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCCc-eEEEE-ccCchHH
Confidence 4688999999988643 345566554211 1135667777766554 34333 3579987
No 69
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=24.43 E-value=1.2e+02 Score=30.06 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=38.2
Q ss_pred hhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh---------------hCCCCEEEEEecCc
Q 005782 373 QLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM---------------ASKGPTILVLMSGG 437 (677)
Q Consensus 373 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~---------------~~~~pvVvVl~~g~ 437 (677)
..+.+..+....||++|+..-.. .+.+|+.-..+|+.+.. ..+|+++++..+|+
T Consensus 82 dd~~~~~~~l~~AD~IV~~~P~y-----------~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg 150 (273)
T 1d4a_A 82 PDIVAEQKKLEAADLVIFQFPLQ-----------WFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGG 150 (273)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECchh-----------hccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCC
Confidence 34566677788999888776322 35678888888888742 13577777777777
Q ss_pred e
Q 005782 438 P 438 (677)
Q Consensus 438 P 438 (677)
|
T Consensus 151 ~ 151 (273)
T 1d4a_A 151 S 151 (273)
T ss_dssp C
T ss_pred C
Confidence 6
No 70
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=23.71 E-value=29 Score=32.04 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=27.9
Q ss_pred ccccc--cccCCCCeEEEEEEeccCCCeeEEcCCCcE
Q 005782 613 VAFEK--VHVPAGAQQRVGINIHVCKYLSVVDRSGTR 647 (677)
Q Consensus 613 ~gF~k--v~L~pGes~~V~~~l~~~~~ls~~d~~~~~ 647 (677)
.+|.. ..|.||++.+|.|.|.. .+.+.||....|
T Consensus 97 I~F~~~ag~l~pg~s~eiq~ri~~-~dws~~dqsNDy 132 (160)
T 1g43_A 97 VALNSDAGSLPAGGSIEIQTRFAR-NDWSNFDQSNDW 132 (160)
T ss_dssp EEECTTSCEECTTCEEEEEEEEEE-TTCCCEEGGGCT
T ss_pred EEecCCcceECCCCcEEEEEEEec-CCCCcccccCCc
Confidence 46765 67999999999999998 688899976554
No 71
>4b9f_A Cellulosomal-scaffolding protein A; sugar binding protein, cellulosome; 1.19A {Clostridium thermocellum atcc 27405} PDB: 1nbc_A
Probab=23.47 E-value=40 Score=30.77 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=29.0
Q ss_pred ccccccccCCCCeEEEEEEeccCCCeeEEcCCCcEE
Q 005782 613 VAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRR 648 (677)
Q Consensus 613 ~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~ 648 (677)
.+|.-..|.||++.+|.|.|.. .+.+.||....|-
T Consensus 94 I~Ft~g~l~pg~~~eiQ~ri~~-~~~s~~d~snDyS 128 (152)
T 4b9f_A 94 ISFTGGTLEPGAHVQIQGRFAK-NDWSNYTQSNDYS 128 (152)
T ss_dssp EEESSCEECTTCEEEEEEEEEE-TTCCCEESTTCTT
T ss_pred EEccCceEcCCCcEEEEEEEEC-CCCcceeEcCCcC
Confidence 4677777999999999999998 6899999876553
No 72
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=23.02 E-value=1.3e+02 Score=27.86 Aligned_cols=56 Identities=16% Similarity=0.019 Sum_probs=38.5
Q ss_pred hhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh----------hCCCCEEEEEecCcee
Q 005782 373 QLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM----------ASKGPTILVLMSGGPI 439 (677)
Q Consensus 373 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~----------~~~~pvVvVl~~g~P~ 439 (677)
.++++..+....||.+|+..=.. .+..|+.-..+|+.+.. -.+|+++++..+|+|.
T Consensus 40 ~D~~~~~~~l~~aD~iV~~~P~y-----------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 40 FNVEQEQSLLLQNDRIILEFPLY-----------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp CCHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred ccHHHHHHHHHhCCEEEEECChh-----------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 34667778889999888765321 35678877888888642 2357777777777764
No 73
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=22.77 E-value=53 Score=33.97 Aligned_cols=58 Identities=19% Similarity=0.256 Sum_probs=33.0
Q ss_pred HHhhcCCEEEEEecCCCcccccccccCCCCCC--HHHHHHHHHHHhhCCCCEEEEEecCceeec
Q 005782 380 DASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDV 441 (677)
Q Consensus 380 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l 441 (677)
+..+++|+||++.|... .+|.+|.++--- .--.++++++.+.+++-+++++ .++|+++
T Consensus 75 ~~~~daDvVvitAg~pr---kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~viv-vsNPvd~ 134 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIV-VGNPANT 134 (333)
T ss_dssp HHTTTCSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE-cCCchHH
Confidence 44689999998877543 345566543100 1124566677766554332333 3579987
No 74
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=22.41 E-value=1.4e+02 Score=27.90 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=28.5
Q ss_pred hhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHH
Q 005782 373 QLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVS 422 (677)
Q Consensus 373 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~ 422 (677)
+.+.+..+..++||.+|++.-+. +..+|+.-..+|+-+.
T Consensus 56 ~~~~~l~~~i~~aD~~ii~tPeY-----------n~s~pg~LKn~iDwls 94 (190)
T 3u7r_A 56 ESVLRLKDRIEHSDAVLAITPEY-----------NRSYPGMIKNAIDWAT 94 (190)
T ss_dssp HHHHHHHHHHHTSSEEEEECCCB-----------TTBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEechhh-----------cccCCHHHHHHHHHhc
Confidence 44566677889999999886432 3567888888888775
No 75
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=22.35 E-value=1.5e+02 Score=36.90 Aligned_cols=57 Identities=12% Similarity=-0.018 Sum_probs=40.9
Q ss_pred CeeEEEEEEEEecCCCCcceeEEEeecCCCCC-CCcccccccccccccCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAFEKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 634 (677)
++.+.+.++|.|..+..++--|+|........ ..+.. =+.+.|++|++++|.|.|.+
T Consensus 782 GE~~~l~~~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~----~~~v~l~~~~~~~v~f~v~p 839 (1451)
T 4acq_A 782 GEAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKE----QAPHCICANGRQTVSWAVTP 839 (1451)
T ss_dssp SSCEEEEEEEEECSSSCEEEEEEECCCTTEEEEESCSC----CCCEEECTTEEEEEEEEEEE
T ss_pred CCEEEEEEEEEeccCccEEEEEEEEcCCCeEeecCCCC----ceEEEECCCCeEEEEEEEEE
Confidence 46899999999998888776677665432211 11100 14678999999999999998
No 76
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=21.86 E-value=78 Score=36.05 Aligned_cols=59 Identities=7% Similarity=-0.048 Sum_probs=41.9
Q ss_pred CeeEEEEEEEEecCCCCcceeEEEeecCCCC--CCCcccccccc--cccccCCCCeEEEEEEecc
Q 005782 574 RLTLGVQVDVKNVGSKDGAHTLLVFSTPPAG--HWAPHKQLVAF--EKVHVPAGAQQRVGINIHV 634 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~--~~~P~k~L~gF--~kv~L~pGes~~V~~~l~~ 634 (677)
+..+.|++.++|..+.. ..|+++++...- -..+..++... ..+.|+|+|+++|.+.|..
T Consensus 486 G~df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 486 GSDFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp TCCEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CCCEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 35699999999998765 568888765322 13355555222 3457999999999999986
No 77
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=21.28 E-value=44 Score=34.60 Aligned_cols=56 Identities=13% Similarity=0.079 Sum_probs=32.9
Q ss_pred hhcCCEEEEEecCCCcccccccccCCCCCCH--HHHHHHHHHHhhCCCCEEEEEecCceeecc
Q 005782 382 SRQADATILVMGLDQSIEAEALDRAGLLLPG--RQQELVSKVSMASKGPTILVLMSGGPIDVA 442 (677)
Q Consensus 382 a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~--~q~~Li~~v~~~~~~pvVvVl~~g~P~~l~ 442 (677)
.++||+||++.|... .+|.+|.++-.-. --.++++++.+.+++ .+++ +.+||+++.
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dll~~N~~I~k~i~~~I~k~~P~-a~il-vvtNPvdi~ 144 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNLVQRNVNIFKFIIPNIVKHSPD-CLKE-LHPELGTDK 144 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGGGHHHHHHHHHHHHHHHHHCTT-CEEE-ECSSSHHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhhCCC-ceEE-eCCCccHHH
Confidence 578999999988653 4555665432111 123556667666554 4433 345798873
No 78
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=21.05 E-value=24 Score=35.89 Aligned_cols=56 Identities=16% Similarity=0.360 Sum_probs=31.9
Q ss_pred HhhcCCEEEEEecCCCcccccccccCCCCCC--HHHHHHHHHHHhhCCCCEEEEEecCceeec
Q 005782 381 ASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDV 441 (677)
Q Consensus 381 ~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l 441 (677)
..++||+||++.|... .+|.+|.++-.- .--.++++++.+.+++ .++++. ++|+++
T Consensus 66 a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~iivv-sNPvd~ 123 (294)
T 1oju_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKILVV-TNPMDV 123 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEEEC-SSSHHH
T ss_pred HhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEEe-CCcchH
Confidence 5688999999988653 334445333100 1123456667665554 444444 579987
No 79
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=20.93 E-value=1.5e+02 Score=27.77 Aligned_cols=37 Identities=5% Similarity=0.148 Sum_probs=27.5
Q ss_pred HHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHH
Q 005782 375 FGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVS 422 (677)
Q Consensus 375 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~ 422 (677)
+++..+....||.+|++.=.. +..+|+.-..+|+.+.
T Consensus 78 ~~~~~~~l~~AD~iV~~~P~y-----------~~~~pa~lK~~iD~~~ 114 (212)
T 3r6w_A 78 SDQLVGELFDSDLLVISTPMY-----------NFSVPSGLKAWIDQIV 114 (212)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEcCcc-----------cccCCHHHHHHHHHHh
Confidence 456677788999888776321 4668888888999885
No 80
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=20.73 E-value=1.7e+02 Score=28.24 Aligned_cols=51 Identities=16% Similarity=0.096 Sum_probs=33.3
Q ss_pred EEEEEEEecCCCCcceeEEEeecCCCCC-CCcccccccccc-cccCCCCeEEEEEEec
Q 005782 578 GVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAFEK-VHVPAGAQQRVGINIH 633 (677)
Q Consensus 578 ~v~v~V~NtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF~k-v~L~pGes~~V~~~l~ 633 (677)
.++++|+|+|+. .-.+|..+.+.... ..|..- -== ..|+||+++.|+|...
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfiv---tPPl~rl~p~~~q~lRI~~~ 81 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAPFLV---MPPLFRLEANQQSQLRIVRT 81 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEE---ESSEEEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEE---eCCEEEECCCCceEEEEEEC
Confidence 468999999975 67999999754321 111100 001 2478999999999654
No 81
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=20.68 E-value=1.8e+02 Score=36.75 Aligned_cols=62 Identities=10% Similarity=-0.037 Sum_probs=40.8
Q ss_pred CeeEEEEEEEEecCCCCcceeEEEeecCCCCC-CCcccccccccccccCCCCeEEEEEEeccCCCe
Q 005782 574 RLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYL 638 (677)
Q Consensus 574 ~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~l 638 (677)
++.+.+.++|.|..+..-+--|+|........ ..+.. ..-+.+.|+||++++|.|.|.+ ..+
T Consensus 827 GEq~~l~v~VfNy~~~~~~V~V~L~~s~~~~~~~~~~~--~~~q~v~v~a~~~~~v~f~i~p-~~~ 889 (1642)
T 3prx_B 827 NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQ--RYRQQFPIKALSSRAVPFVIVP-LEQ 889 (1642)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSS--CCEEEEEECSSEEEEEEEEEEE-CSC
T ss_pred CCEEEEEEEEEcCCCCcEEEEEEEEcCCCeEeeccCCC--cceeEEEECCCCeEEEEEEEEE-eec
Confidence 46899999999998876655566654332211 11111 1124568999999999999988 433
No 82
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=20.37 E-value=32 Score=35.91 Aligned_cols=56 Identities=13% Similarity=0.197 Sum_probs=31.1
Q ss_pred HHhhcCCEEEEEecCCCcccccccccCCCCCCHHH----HHHHHHHHhhCCCCEEEEEecCceeec
Q 005782 380 DASRQADATILVMGLDQSIEAEALDRAGLLLPGRQ----QELVSKVSMASKGPTILVLMSGGPIDV 441 (677)
Q Consensus 380 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q----~~Li~~v~~~~~~pvVvVl~~g~P~~l 441 (677)
+..+++|+||++.|... .+|-+|.+| =..- .++.+++.+.+.+.++| +..+||++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DL--l~~Na~I~~~~~~~i~~~a~~~~~v-lvvsNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDL--LEMNARIFKEQGEAIAAVAASDCRV-VVVGNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEE-EECSSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHH--HHHhHHHHHHHHHHHHhhccCceEE-EEeCCCcch
Confidence 45689999999887653 345455433 1111 23455555533333433 344679876
No 83
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=20.02 E-value=1.7e+02 Score=28.11 Aligned_cols=55 Identities=18% Similarity=0.213 Sum_probs=36.0
Q ss_pred hhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHh---------------hCCCCEEEEEecCc
Q 005782 373 QLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM---------------ASKGPTILVLMSGG 437 (677)
Q Consensus 373 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~---------------~~~~pvVvVl~~g~ 437 (677)
+.+.+..+..+.||.+|+..=.. ...+|+.-..+|+.+.. ..+|++++++.+|+
T Consensus 81 dd~~~~~~~l~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~ 149 (228)
T 3tem_A 81 SDITDEQKKVREADLVIFQFPLY-----------WFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGG 149 (228)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECChh-----------hcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCC
Confidence 34556677788999888775321 35678877888887742 13566666666665
Q ss_pred e
Q 005782 438 P 438 (677)
Q Consensus 438 P 438 (677)
|
T Consensus 150 ~ 150 (228)
T 3tem_A 150 T 150 (228)
T ss_dssp C
T ss_pred C
Confidence 5
Done!