Query 005783
Match_columns 677
No_of_seqs 234 out of 687
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 13:41:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005783.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005783hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02703 beta-fructofuranosida 100.0 2E-125 4E-130 1027.6 39.0 495 181-677 122-618 (618)
2 PLN02973 beta-fructofuranosida 100.0 8E-118 2E-122 963.2 35.4 471 184-660 99-569 (571)
3 PLN03005 beta-fructofuranosida 100.0 5E-117 1E-121 956.0 37.4 465 185-654 78-542 (550)
4 PF12899 Glyco_hydro_100: Alka 100.0 1E-116 3E-121 938.4 33.6 436 194-636 1-436 (436)
5 PF06202 GDE_C: Amylo-alpha-1, 100.0 9.3E-58 2E-62 493.1 30.2 326 210-628 16-370 (370)
6 COG3408 GDB1 Glycogen debranch 100.0 1.2E-47 2.6E-52 437.7 31.4 354 188-639 247-615 (641)
7 TIGR01561 gde_arch glycogen de 100.0 1.4E-47 3.1E-52 432.3 22.4 273 222-574 286-574 (575)
8 TIGR01531 glyc_debranch glycog 100.0 8.5E-47 1.8E-51 447.6 24.0 343 222-631 1025-1462(1464)
9 PRK10137 alpha-glucosidase; Pr 100.0 2.9E-33 6.3E-38 322.8 33.7 376 185-631 303-781 (786)
10 KOG3625 Alpha amylase [Carbohy 99.9 1.7E-25 3.7E-30 253.2 18.9 349 226-634 1078-1517(1521)
11 TIGR01577 oligosac_amyl oligos 99.9 5.4E-24 1.2E-28 244.1 31.3 334 195-633 254-613 (616)
12 PRK13271 treA trehalase; Provi 99.8 8.6E-19 1.9E-23 198.4 26.6 309 224-634 154-537 (569)
13 PLN02567 alpha,alpha-trehalase 99.8 4.8E-17 1E-21 184.5 30.6 332 224-641 147-552 (554)
14 COG3387 SGA1 Glucoamylase and 99.8 1.2E-16 2.5E-21 183.3 29.2 333 210-635 261-606 (612)
15 PRK13272 treA trehalase; Provi 99.7 1.1E-15 2.4E-20 172.2 26.7 343 190-636 122-539 (542)
16 PRK13270 treF trehalase; Provi 99.7 1.4E-15 3E-20 171.8 26.5 310 225-636 167-549 (549)
17 TIGR01535 glucan_glucosid gluc 99.7 7.1E-15 1.5E-19 169.4 32.5 360 188-634 249-633 (648)
18 PF01204 Trehalase: Trehalase; 99.7 4.2E-15 9E-20 167.9 24.1 315 225-632 124-510 (512)
19 PF05592 Bac_rhamnosid: Bacter 99.5 1.2E-12 2.6E-17 146.9 18.7 322 185-640 116-454 (509)
20 PF04685 DUF608: Protein of un 99.4 1.5E-13 3.1E-18 149.5 9.0 310 238-622 23-362 (365)
21 PF03200 Glyco_hydro_63: Manno 99.4 4.1E-12 8.8E-17 150.0 19.8 220 383-629 558-797 (801)
22 PF00723 Glyco_hydro_15: Glyco 99.3 8E-10 1.7E-14 122.8 24.3 196 195-427 3-225 (448)
23 COG3459 Cellobiose phosphoryla 99.3 2.7E-10 5.8E-15 133.0 20.5 280 230-589 611-921 (1056)
24 COG1626 TreA Neutral trehalase 98.6 3.8E-06 8.2E-11 94.5 21.6 192 381-634 352-553 (558)
25 KOG2161 Glucosidase I [Carbohy 98.6 6.5E-06 1.4E-10 94.8 22.2 226 369-625 584-839 (849)
26 PF06824 DUF1237: Protein of u 98.4 2.7E-06 6E-11 93.9 14.7 344 207-628 29-420 (424)
27 KOG0602 Neutral trehalase [Car 98.1 9.2E-05 2E-09 84.9 18.0 335 211-639 167-570 (600)
28 COG4354 Predicted bile acid be 98.0 0.00029 6.3E-09 79.9 19.6 220 313-593 441-677 (721)
29 COG3538 Uncharacterized conser 96.7 0.13 2.9E-06 56.2 18.8 326 229-630 60-419 (434)
30 KOG2119 Predicted bile acid be 95.4 0.23 4.9E-06 58.4 13.8 97 327-433 570-671 (879)
31 cd00249 AGE AGE domain; N-acyl 90.2 17 0.00037 39.3 17.7 99 315-431 54-152 (384)
32 PF03632 Glyco_hydro_65m: Glyc 84.2 4.4 9.6E-05 45.1 8.9 155 225-404 28-195 (370)
33 PRK13807 maltose phosphorylase 59.8 1.4E+02 0.0031 36.6 13.9 80 319-404 430-515 (756)
34 TIGR01507 hopene_cyclase squal 54.2 1.4E+02 0.003 35.8 12.5 81 187-273 333-427 (635)
35 COG1554 ATH1 Trehalose and mal 53.7 5.2E+02 0.011 32.0 18.2 78 320-403 440-523 (772)
36 PF07221 GlcNAc_2-epim: N-acyl 47.0 1.8E+02 0.004 31.3 11.2 99 316-436 83-181 (346)
37 cd02892 SQCY_1 Squalene cyclas 45.7 6E+02 0.013 30.4 25.1 132 187-351 275-412 (634)
38 cd02892 SQCY_1 Squalene cyclas 37.9 2.7E+02 0.0059 33.2 11.6 121 187-328 326-465 (634)
39 PF13249 Prenyltrans_2: Prenyl 34.7 79 0.0017 27.8 5.1 37 232-268 23-61 (113)
40 PF07721 TPR_4: Tetratricopept 32.3 67 0.0015 21.7 3.2 25 564-588 1-25 (26)
41 PLN03012 Camelliol C synthase 29.1 2.2E+02 0.0048 35.1 8.9 89 188-283 637-734 (759)
42 PF06051 DUF928: Domain of Unk 26.6 73 0.0016 32.3 3.8 32 385-418 143-174 (189)
43 cd02889 SQCY Squalene cyclase 25.4 4.4E+02 0.0095 28.1 9.7 120 193-351 2-129 (348)
44 KOG4125 Acid trehalase [Carboh 24.4 1.4E+02 0.003 34.6 5.7 80 319-405 373-459 (682)
45 PLN02993 lupeol synthase 23.7 1.5E+03 0.032 28.2 22.0 304 188-601 387-722 (763)
46 TIGR03463 osq_cycl 2,3-oxidosq 23.7 3.9E+02 0.0085 32.1 9.6 117 189-351 476-595 (634)
47 TIGR01507 hopene_cyclase squal 23.4 4.2E+02 0.0091 31.9 9.8 119 189-353 470-591 (635)
48 TIGR03463 osq_cycl 2,3-oxidosq 22.1 1E+03 0.022 28.7 12.6 122 187-329 325-466 (634)
49 PF13428 TPR_14: Tetratricopep 20.4 2.1E+02 0.0047 21.3 4.5 31 564-594 1-31 (44)
No 1
>PLN02703 beta-fructofuranosidase
Probab=100.00 E-value=1.7e-125 Score=1027.62 Aligned_cols=495 Identities=72% Similarity=1.242 Sum_probs=479.3
Q ss_pred CcccCCcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHh
Q 005783 181 GVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQ 260 (677)
Q Consensus 181 ~~~~~~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~ 260 (677)
|...+.+.+.|+++||++|++++|+||++|+||+||.|+....+.||++||+||++|+++++|+.|++|++|+||..+++
T Consensus 122 ~~~~~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~ 201 (618)
T PLN02703 122 GNAQSVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQ 201 (618)
T ss_pred CcccccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 33467888999999999999999999999999999988853356999999999999999999999999999999999999
Q ss_pred hccccccccccCCCCCCCCCcceeccccCCCcc--cccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh
Q 005783 261 LQSWEKTVDCYSPGQGLMPASFKVRNVPLESNK--FEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER 338 (677)
Q Consensus 261 lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~--~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~ 338 (677)
||++++++|+|++++|+||.+|||.++++|.++ +|++++||+|+.+++|+++|||+|||||++++|.+.|||.+|+++
T Consensus 202 lq~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~ 281 (618)
T PLN02703 202 LQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQER 281 (618)
T ss_pred hhhhHHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHhhh
Confidence 999999999999999999999999998887765 778999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 005783 339 VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (677)
Q Consensus 339 ~~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~r 418 (677)
+.||++|+.|+++|+.++|+++|+|+++||++|+|+||+++|||+|||||||.|||++.+|+...++ .+++..++..|
T Consensus 282 ~~~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~--~~e~i~~i~~r 359 (618)
T PLN02703 282 VDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDG--SVDLIRALNNR 359 (618)
T ss_pred hhHHHHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccch--HHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999998876543 68899999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchh
Q 005783 419 LSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLW 498 (677)
Q Consensus 419 a~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~L 498 (677)
+.+|+.+++++||++.+++++|||++||+|++.|+|||||||++||+|+.||++++|||++|||+|+++|+|||++||+|
T Consensus 360 l~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlL 439 (618)
T PLN02703 360 LVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLW 439 (618)
T ss_pred hhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhC
Q 005783 499 SIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMG 578 (677)
Q Consensus 499 Al~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G 578 (677)
|+++||++++|+++|+++|+++|++|.+.|||++|||++.+.+||++|+++|+|.||+|||||+||.++|++++|++|.|
T Consensus 440 AILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~G 519 (618)
T PLN02703 440 SIVSSLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMG 519 (618)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhhCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhcCCCcCccccccccHHHHhHhhhhc
Q 005783 579 RLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCAL 658 (677)
Q Consensus 579 ~~~~A~~ll~~a~~~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~p~~~~~~~~~~~~~~~~~~~~~~ 658 (677)
+.+.|+++++.+++++..+.|||||||.+|+|+|.+||..||||+|++|+++++|+||+++.+|+|+||.++++.|+|.+
T Consensus 520 r~~lA~ral~~ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~~~~~~~~~ 599 (618)
T PLN02703 520 RPEIAEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMI 599 (618)
T ss_pred CHHHHHHHHHHHHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhhhhhheeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccccCC
Q 005783 659 SKSGRKKCSRGAAKSQILV 677 (677)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~ 677 (677)
++++|+||+|+++|.+++|
T Consensus 600 ~~~~~~~~~~~~~~~~~~~ 618 (618)
T PLN02703 600 SANPRRTRGPKKAQQPFIV 618 (618)
T ss_pred ccCCcccCCCccccCCccC
Confidence 9999999999999999886
No 2
>PLN02973 beta-fructofuranosidase
Probab=100.00 E-value=8.5e-118 Score=963.16 Aligned_cols=471 Identities=56% Similarity=1.061 Sum_probs=454.8
Q ss_pred cCCcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhcc
Q 005783 184 TKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQS 263 (677)
Q Consensus 184 ~~~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs 263 (677)
.+.+.+.|+++||++|++++|+|+|+|+|||||.|++ +.+.||++||+||++|+++++|+.|++|++|+||..+++||+
T Consensus 99 ~~~~~~~~~~~aw~~l~~s~v~~~g~pvgtvAa~d~~-~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~TL~lq~ 177 (571)
T PLN02973 99 PGFESHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNS-EEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLRLQS 177 (571)
T ss_pred ccCCCCcHHHHHHHHHHhheEEECCeeeeeeeccCCc-cccccCcchhhhccHHHHHHHHHCCCHHHHHHHHHHHHhhhh
Confidence 3567899999999999999999999999999999885 478999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHH
Q 005783 264 WEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQT 343 (677)
Q Consensus 264 ~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~ 343 (677)
+++++|+|++++|+||.+|||.+++++ +++.+.+|||+.+++++.+|||+|||||++++|.+.|||.+|++.|+||+
T Consensus 178 ~ektld~~q~g~G~mPaSfkv~~~p~~---~~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~TgD~s~~e~pevQr 254 (571)
T PLN02973 178 WEKKIDRFQLGEGVMPASFKVFHDPVR---NHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLADMPECQK 254 (571)
T ss_pred hHHHHHhcccCCCCcCceeeecccccC---ccccccccccccccccccccchhhHHHHHHHHHHHhccchhhhhcHHHHH
Confidence 999999999999999999999886543 57788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 005783 344 GIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALS 423 (677)
Q Consensus 344 al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk 423 (677)
+|++|++.|+.++|+++|+|+++||++|+|++|+++|||+|||||||.||||+.+|+...++ .+++..++.+|+.+|+
T Consensus 255 gi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pLeiQaLfy~ALR~a~~~L~~~~~--~~~~i~~i~~rl~~L~ 332 (571)
T PLN02973 255 GIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKHDGE--GKEMVEQIVKRLHALS 332 (571)
T ss_pred HHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccch--hHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998876543 6889999999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcC
Q 005783 424 FHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSS 503 (677)
Q Consensus 424 ~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~g 503 (677)
++++++||++.+++++||||+|++|++.|+|||||||++||+|++||++++|||++|||+|+++|+|||++||+||+++|
T Consensus 333 ~hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRffslGNllAILs~ 412 (571)
T PLN02973 333 YHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGNCIAILSS 412 (571)
T ss_pred HHHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccchhhhhhccCCCceeeeecccccCCcchhhhhhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHH
Q 005783 504 LGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLA 583 (677)
Q Consensus 504 ll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A 583 (677)
|++++|+++|+++|+++|++|.+.||||+|||++++.+||++|+++|+|.||+|||||+||.++|++++|++|.|+.+.|
T Consensus 413 Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkicyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~lA 492 (571)
T PLN02973 413 LATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIA 492 (571)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCcceeccCcCCccceehhccCCCCCccceecCCCccHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhcCCCcCccccccccHHHHhHhhhhccc
Q 005783 584 QKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCALSK 660 (677)
Q Consensus 584 ~~ll~~a~~~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~p~~~~~~~~~~~~~~~~~~~~~~~~ 660 (677)
+++++.+++++..+.|||||||++|+|+|.+||..||||+|++|+++++|+||+++.+|+|+||.++.+.|.|.-|-
T Consensus 493 ~ral~~ae~rl~~d~WpEyyDGktGr~iGkqar~yQTWSiAG~LlA~~~L~~P~~~~~~~~~e~~~~~~~~~~~~~~ 569 (571)
T PLN02973 493 RRAIEVAEARLHKDHWPEYYDGKVGRYVGKQSRKNQTWSVAGYLVAKMMLEDPSHVGMVCLEEDKQMKPVMRRSNSW 569 (571)
T ss_pred HHHHHHHHHHhhhcCChhhcCCCCCcCcceeccccCchHHHHHHHHHHHhhChhhcccccccccccccchhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987653
No 3
>PLN03005 beta-fructofuranosidase
Probab=100.00 E-value=5.1e-117 Score=956.00 Aligned_cols=465 Identities=57% Similarity=1.056 Sum_probs=446.5
Q ss_pred CCcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccc
Q 005783 185 KREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSW 264 (677)
Q Consensus 185 ~~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~ 264 (677)
..+.+.|+++||++|++++|+|+|+|+||+||.|+....+.||++||+||++|+++++|+.|++|++|+||..+++||++
T Consensus 78 ~~~~~~~~~~a~~~l~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qvF~RDfvpsaLafLl~Ge~eIVrnFl~~~L~Lq~~ 157 (550)
T PLN03005 78 SFEPHPMMAEAWEALRRSMVFFRGQPVGTLAAVDNTTDEVLNYDQVFVRDFVPSALAFLMNGEPDIVKHFLLKTLQLQGW 157 (550)
T ss_pred CCCCCcHHHHHHHHHHhheEEECCccceeeeecCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 46789999999999999999999999999999887533569999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHH
Q 005783 265 EKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTG 344 (677)
Q Consensus 265 e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~a 344 (677)
++++|+|++++|+||.+|||.+++++ ++++++||||+.+++++.+|||+|||||++++|.+.|||.+|+++|+||++
T Consensus 158 ek~~d~~q~g~G~mPaSfkv~~~p~~---~~~~l~aDfG~~aIGRv~pVDS~LWWIIllraY~k~tgD~s~~e~pevQrg 234 (550)
T PLN03005 158 EKRVDRFKLGEGVMPASFKVLHDPIR---ETDNIVADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSETPECQKG 234 (550)
T ss_pred hhhhhcccCCCCCcCceeeecccccC---CCccccccccccccccccccchhhHHHHHHHHHHhhccchhhhhChHHHHH
Confidence 99999999999999999999886433 456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHH
Q 005783 345 IKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSF 424 (677)
Q Consensus 345 l~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~ 424 (677)
|++||+.|+.++|+++|+|+++||++|+|++|+++|||+|||||||.||||+.+|+...++ .+++..++.+|+.+|++
T Consensus 235 i~lil~lcLa~~Fd~~ptLlvpDgs~miDRrMgv~G~pLeiQaLfy~ALR~~~~~L~~~~~--~~~~i~~i~~rl~~L~~ 312 (550)
T PLN03005 235 MKLILSLCLAEGFDTFPTLLCADGCSMIDRRMGVYGYPIEIQALFFMALRSALSMLKPDGD--GREFIERIVKRLHALSF 312 (550)
T ss_pred HHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccch--hHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998876543 68999999999999999
Q ss_pred HHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCC
Q 005783 425 HIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSL 504 (677)
Q Consensus 425 ~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gl 504 (677)
+++++||+|.+++++||||+|++|++.|+||||++|++||+|++||++++|||++|||+|+++|+|||++||+||+++||
T Consensus 313 h~r~yyWld~~~ln~iyr~kteey~~~a~NkfNi~pd~ip~wl~dwlp~~gGY~igNv~pa~~dfRffslGNllAILs~L 392 (550)
T PLN03005 313 HMRNYFWLDHQNLNDIYRFKTEEYSHTAVNKFNVMPDSIPEWVFDFMPLRGGYFVGNVGPAHMDFRWFALGNCVSILSSL 392 (550)
T ss_pred HHHHheecchhhhhhhhhccHhhhchhhhhccccCCccchhhhhhhcccCCceeeeecccccCCceehhhhhHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHH
Q 005783 505 GTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQ 584 (677)
Q Consensus 505 l~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~ 584 (677)
++++|+++|+++|+++|++|.+.|||++|||+++..+||++|+++|+|.||+|||||+||.++|++++|++|.|+.+.|+
T Consensus 393 at~~Qs~aIm~lIe~~w~~Lv~~MPlkIcyPa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~lA~ 472 (550)
T PLN03005 393 ATPDQSMAIMDLLEHRWEELVGEMPLKICYPCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWQLTAACIKTGRPQIAR 472 (550)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCCcceeecccCCccceecccCCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHHH
Confidence 99999999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhcCCCcCccccccccHHHHhHh
Q 005783 585 KAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEIC 654 (677)
Q Consensus 585 ~ll~~a~~~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~p~~~~~~~~~~~~~~~~~~ 654 (677)
++++.+++++..+.|||||||++|+|+|.+||..||||+|++|+++++|+||+++.+|+|+||....+.|
T Consensus 473 ral~~ae~rl~~d~WpEyydGktGr~iGkqar~~QTWSiAG~Lla~~~L~~P~~~~~~~~~e~~~~~~~~ 542 (550)
T PLN03005 473 RAVDLIESRLHRDCWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKMLLEDPSHIGMISLEEDKLMKPVI 542 (550)
T ss_pred HHHHHHHHHhhhcCchhhcCCCCCcccceeccccCchHHHHHHHHHHHhhChhhccccccccccccchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999998665544
No 4
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=100.00 E-value=1.2e-116 Score=938.41 Aligned_cols=436 Identities=69% Similarity=1.255 Sum_probs=425.0
Q ss_pred HHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCC
Q 005783 194 EAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSP 273 (677)
Q Consensus 194 ~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~ 273 (677)
+||++|++|+|+|+|+|+||+||.|++...+.||++||.||+++|++++|+.|++||||+||..+++||++++++|+|++
T Consensus 1 ~a~~~l~~s~v~~~g~pvGtvAa~d~~~~~~lNY~qvF~RDfvps~l~fL~~g~~eIVrnFL~~tl~Lq~~~~~~d~~~~ 80 (436)
T PF12899_consen 1 EAWELLERSIVYYQGQPVGTVAALDPSAEEALNYDQVFVRDFVPSALAFLMKGEPEIVRNFLLETLQLQSWEKQVDCFKP 80 (436)
T ss_pred ChHHHHhhheEeeCCceeeeeeecCCcccccccccceEeecChHHHHHHHHcCCHHHHHHHHHHHHhhhhhhhhcccccc
Confidence 59999999999999999999999999866899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhh
Q 005783 274 GQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL 353 (677)
Q Consensus 274 ~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~ 353 (677)
++|+||.||||.+ +.+++.+.||||+.+|+++.+|||++||||++++|.+.|||.+|.++|++|++|+.|++.|+
T Consensus 81 g~G~mPaSFkv~~-----~~~~e~l~aDfGe~AIgRv~pVDs~~WWiillraY~k~tgD~s~~~~~~~Q~gi~liL~lcL 155 (436)
T PF12899_consen 81 GRGVMPASFKVLH-----ENEEETLIADFGERAIGRVAPVDSGLWWIILLRAYVKATGDYSLAESPEVQRGIRLILDLCL 155 (436)
T ss_pred CCCcccceEEEec-----CCCCceEecCcchhhhccccCcccccHHHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHHHc
Confidence 9999999999875 23788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhh
Q 005783 354 ADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433 (677)
Q Consensus 354 ~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d 433 (677)
.++|+++|+|+++||++|+|+|||++|||+|||||+|.||||+.+|+...++ .+++.+++.+|+.+|+.++++|||+|
T Consensus 156 ~~~Fd~~PtLlvpDg~~MiDRrMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~--~~~~~~~i~~rl~~L~~h~r~~yWld 233 (436)
T PF12899_consen 156 ADGFDMFPTLLVPDGACMIDRRMGVYGHPLEIQALFYMALRCARELLKPDEE--GKDLIERIDKRLHALSFHIREYYWLD 233 (436)
T ss_pred ccccCCCceEEecCCceeecccccccCCcchHHHHHHHHHHHHHHhcCcccc--hhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999886543 68899999999999999999999999
Q ss_pred hhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHH
Q 005783 434 MKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESI 513 (677)
Q Consensus 434 ~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~V 513 (677)
.+++|+|||++||+|+++|.|||||||++||+|++||++++|||++||++|+++|+|||++||+||+++||++++|+++|
T Consensus 234 ~~~ln~iyr~~teey~~~a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfRff~lGNlLAiLsgLat~~qa~~I 313 (436)
T PF12899_consen 234 LKRLNEIYRYKTEEYGHTAVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFRFFSLGNLLAILSGLATPEQAEAI 313 (436)
T ss_pred HHHHHHHHhccHhhhhhhhhhcccCCcccchHHHHHhcccCCceeEeeccccccceeehhhhhHHHHHhcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhh
Q 005783 514 LNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENR 593 (677)
Q Consensus 514 v~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~ 593 (677)
++.|++.|++|.++||||+|||++++.+||++|+++|+|.||+|||||+||+++|++++|++|.|+.+.|++++..++++
T Consensus 314 ~~lIe~~~~~L~g~mPlki~yPale~~eWri~tg~dpKN~PwsYHNGG~WP~LlW~~~aA~ik~gr~~lA~~al~~a~~r 393 (436)
T PF12899_consen 314 MDLIEERWEDLVGPMPLKICYPALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLLWFLTAALIKMGRPELAERALEAAENR 393 (436)
T ss_pred HHHHHHHHhhhccccchhhccCCCCCCCCccccCcCcCccccccccCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhcCC
Q 005783 594 LPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENP 636 (677)
Q Consensus 594 l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~p 636 (677)
+..++|||||||.+|+|+|++|+..||||||++|+++++|+||
T Consensus 394 L~~dewpEyydGktGrp~Gkqar~~QTWSaAgyLlA~~~l~~p 436 (436)
T PF12899_consen 394 LSKDEWPEYYDGKTGRPMGKQARKYQTWSAAGYLLAKHLLENP 436 (436)
T ss_pred hcccCCcccccCCCCCcccccccccCchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999998
No 5
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=100.00 E-value=9.3e-58 Score=493.11 Aligned_cols=326 Identities=26% Similarity=0.374 Sum_probs=252.9
Q ss_pred cceeeeccCCCCCCCCCCCcccchhhHHHHHHH-hccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceecccc
Q 005783 210 PIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVP 288 (677)
Q Consensus 210 p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lgl-L~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e 288 (677)
+.|.... ||.|||.. ||||++||++|+ |..|+++.++++|..++..| .+|+||+.+.
T Consensus 16 ~~~~~i~-----AG~PWF~~-~GRDt~Isl~gl~l~~~~~~~a~~~L~~~~~~~-----------~~G~ipn~~~----- 73 (370)
T PF06202_consen 16 EGGPSIA-----AGYPWFST-WGRDTFISLPGLLLSPGRFEEARNILATFAGTQ-----------RHGLIPNELR----- 73 (370)
T ss_pred CCCceEe-----ccCccccc-cccHHHHHHHHHHhCCCcHHHHHHHHHHHHHhh-----------hcCcccCccc-----
Confidence 4455444 78999999 999999999986 68899999999998665333 3899999662
Q ss_pred CCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhh-cCCCccc---C-cc
Q 005783 289 LESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL-ADGFDMF---P-SL 363 (677)
Q Consensus 289 ~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~-~~gf~~y---~-~L 363 (677)
+ |+. .+||+||+|||||+++++|+++|||.+|+++ +.+.++.|++++. +..|... . +|
T Consensus 74 ------------~-~~~--~~Y~s~Dat~wfl~~l~~Y~~~t~D~~~l~~--~~~~i~~il~~~~~g~~~~~~~d~~~gl 136 (370)
T PF06202_consen 74 ------------D-GEE--PRYNSVDATLWFLIALQEYYRWTGDYSFLRE--LYPAIEEILEWYADGTDFGIRVDPEDGL 136 (370)
T ss_pred ------------C-CCC--CCCCCCccHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHHhCCCCccccccCCCe
Confidence 1 332 4689999999999999999999999999987 2344555555442 3333221 1 22
Q ss_pred cc-cC---CCcccccc------cCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhh
Q 005783 364 LV-TD---GSCMIDRR------MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433 (677)
Q Consensus 364 l~-~d---G~~WmD~r------~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d 433 (677)
+. .+ ..+|||.. .||.|++||||||||+||+++++|+...++ +.+..+++++++||++|+++||++
T Consensus 137 ~~~~~~~~~~tWmD~~~~g~~~tpr~g~~vEIqal~y~AL~~~~~la~~~~~----~~a~~~~~~A~~lk~~F~~~FW~~ 212 (370)
T PF06202_consen 137 IYSGNGLNNQTWMDARNDGRPVTPRDGAAVEIQALWYNALRFAAELAEKFGD----ELAARYREWAERLKESFEKRFWDE 212 (370)
T ss_pred eecCCCCCCCCccccccCCccccCCCCcchHHHHHHHHHHHHHHHHHhhcCC----chHHHHHHHHHHHHHHHHHHHcCC
Confidence 22 22 36899976 378999999999999999999999997653 267778889999999999999986
Q ss_pred hhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCc-cCcccccccc---hhhhhcCCCCHHH
Q 005783 434 MKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAH-MDFRFFTLGN---LWSIVSSLGTPKQ 509 (677)
Q Consensus 434 ~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~-~D~r~dslGN---~LAl~~gll~~eq 509 (677)
+++ |+.+.+++.. .|. .+.+| +++++++++++++
T Consensus 213 ~~g----------------------------------------~~~d~ld~~~~~d~--~irpN~~~a~~L~~~~l~~~~ 250 (370)
T PF06202_consen 213 DRG----------------------------------------YYADALDGDKEPDD--SIRPNQLIALSLPPGLLDPEQ 250 (370)
T ss_pred CCC----------------------------------------EEEEEecCCCCCCc--ccccCchhHHhcCCccCCHHH
Confidence 543 3333333321 221 12233 3457899999999
Q ss_pred HHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCCh-----HHHH
Q 005783 510 NESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRL-----GLAQ 584 (677)
Q Consensus 510 a~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~-----~~A~ 584 (677)
++++++.+++ +|+||+|||+|+| .++.|+++|.+++..++.+||||+||||++++|+.|++|+|.. .+++
T Consensus 251 a~~vl~~~~~---~L~tp~GlRTLs~--~~~~Y~p~y~g~~~~rd~sYHnGsvWpw~~g~~~~al~r~g~~~~~~~~~~~ 325 (370)
T PF06202_consen 251 AKKVLDRVEE---ELLTPWGLRTLSP--SDPRYNPIYEGDQDSRDMSYHNGSVWPWDNGIYAEALLRYGFDEEEAIREAK 325 (370)
T ss_pred HHHHHHHHHH---HcCCCCchhcccC--CCCCcCCCCCCccccCcccccCCCcCcCcHHHHHHHHHHhCccchHHHHHHH
Confidence 9999999876 9999999999999 7899999999999999999999999999999999999999973 3455
Q ss_pred HHHHHHHhhC---CCCCCCccccCCC-CCccCCCCCccchHhHHHHHH
Q 005783 585 KAVALAENRL---PLDHWPEYYDTRT-GRFTGKQSRLFQTWTIAGFLT 628 (677)
Q Consensus 585 ~ll~~a~~~l---~~~~~pE~FDG~t-g~p~G~~ac~~QAWSaA~~L~ 628 (677)
.+++...+++ ..+++||+|||++ ..|.||. +||||+|++|+
T Consensus 326 ~ll~~~~~~~~~~~~~~lpEl~dg~~~~~p~gc~---~QAWS~a~ilr 370 (370)
T PF06202_consen 326 SLLEGFEEHLQEFGLGRLPELFDGDPPHYPRGCS---PQAWSVAEILR 370 (370)
T ss_pred HHHHHHHHHHhhccCCCcchhcCCCCCCCCCCCH---HHHHHHHHhhC
Confidence 5555443333 5789999999986 4777766 99999999885
No 6
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-47 Score=437.74 Aligned_cols=354 Identities=24% Similarity=0.287 Sum_probs=264.4
Q ss_pred chHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhcccccc
Q 005783 188 ETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKT 267 (677)
Q Consensus 188 ~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~ 267 (677)
.++++++|...|-.+.+....+..+++|+.+ .+ +||. +||||++||++|+|+.|++|+||++|++++
T Consensus 247 ~~~~~~~a~~dl~~~~~~~~~~g~~~~Ag~P--~~--~WF~-~fGRD~lIS~lgll~~g~~elArg~L~~~a-------- 313 (641)
T COG3408 247 LNEAFRRAKADLLELTTSTGETGPGLYAGLP--IA--HWFS-PFGRDTLISALGLLLVGRFELARGTLNTLA-------- 313 (641)
T ss_pred HHHHHHHHHHHHHHHHhhccccCcceEecCC--cc--hhcc-ccchHHHHHHHHHHhcCCHHHHHHHHHHHH--------
Confidence 4466666666665544422223456666532 12 5999 999999999999986699999999999776
Q ss_pred ccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh--hcHHHHH
Q 005783 268 VDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGI 345 (677)
Q Consensus 268 ~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~~vq~al 345 (677)
.|. .+|+||+++. .+.+ ..++||+||+|+|||+++.+|+++|+|.+|+++ +.+..++
T Consensus 314 --~~~-~~GkIPhe~~----------------~~~~--~~~~Y~tvD~t~~~i~~~~~y~~~t~d~~~i~e~~~~v~~a~ 372 (641)
T COG3408 314 --RYS-EPGKIPHEIL----------------LSIP--GEPYYNTVDATPLFIYLLGAYLKYTGDTEFIRELWPSVGAAL 372 (641)
T ss_pred --hhc-cCCCCcchhh----------------hcCC--CcceeccCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 344 5899999761 0111 125899999999999999999999999999998 6666666
Q ss_pred HHHHHHhhcCCCcccCcccccC--CCcccccc------cCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Q 005783 346 KLIMNLCLADGFDMFPSLLVTD--GSCMIDRR------MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINN 417 (677)
Q Consensus 346 ~~Il~~~~~~gf~~y~~Ll~~d--G~~WmD~r------~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ 417 (677)
+|++.....+ |+.+..++..+ ..+|||.. +|+.|.|||+||+||+|++.+..+|..++ ..+.++.+.+
T Consensus 373 d~~~~~~~~~-~~~~~~~l~~~~~~~tW~Ds~~~~~~~~~~~g~pi~i~al~~~~~~a~~~~a~ll~---~~~~~~~~~~ 448 (641)
T COG3408 373 DWILKGFDFG-FDTYGDGLLEGGSNQTWMDSGDDIFAVTPRAGKPVAINALQYYALKAALRLANLLG---DEEDAARLEK 448 (641)
T ss_pred HHHHhcCCcc-ceecCcccccCCCCCCCeecCCccccccCCCCCceeHHHHHHHHHHHHHHHHHHhc---ccccHHHHHH
Confidence 6655544333 66776555444 56899986 47899999999999999999999999886 2344566777
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccch
Q 005783 418 RLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNL 497 (677)
Q Consensus 418 ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~ 497 (677)
+++.++++|++.||++ .+++++ +.+ +.++- ++|+. +.+-
T Consensus 449 ~a~~l~~~F~~~fw~~-~~f~dl-----------~~~-------------------~~~~~---~r~~~------~~a~- 487 (641)
T COG3408 449 IARRLKESFEAKFWNP-TGFYDL-----------ALD-------------------DKDVP---IRPNF------SNAI- 487 (641)
T ss_pred HHHHHHHHHHHHhhCc-cchHhh-----------hcc-------------------CCCcc---cCccc------eecc-
Confidence 8888999999999996 334322 111 00111 12221 1111
Q ss_pred hhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHh
Q 005783 498 WSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKM 577 (677)
Q Consensus 498 LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~ 577 (677)
..+..||++++++ .|++++++ +|+||+|||+|+| .+|.|+|+.||||+||||++|+|+.|+.|+
T Consensus 488 ~l~~~gi~~~~~~-~~~~l~e~---~lltp~GlRTLS~------------~dp~Y~p~yYH~GtVWP~~~gifv~g~~r~ 551 (641)
T COG3408 488 HLLYTGIVDPERA-VIIRLAEE---DLLTPWGLRTLSP------------DDPRYNPMYYHNGTVWPHDTGIFVLGLRRY 551 (641)
T ss_pred cccccccCchHHH-HHHHHHHH---hccCCccccccCC------------CCCCcCCCcccCCCcccchHHHHHHHHHHc
Confidence 1357788888776 77778777 9999999999999 478899999999999999999999999999
Q ss_pred CChH-HHHHHHHHHHhhCCCCCCCccccCCCCC-ccCCCCCccchHhHHHHHHH-HH-Hhc-CCCcC
Q 005783 578 GRLG-LAQKAVALAENRLPLDHWPEYYDTRTGR-FTGKQSRLFQTWTIAGFLTS-KM-LVE-NPEMA 639 (677)
Q Consensus 578 G~~~-~A~~ll~~a~~~l~~~~~pE~FDG~tg~-p~G~~ac~~QAWSaA~~L~a-~~-lL~-~p~~~ 639 (677)
|..+ ++.++++.+......++.||+|||..+. |.||. +||||+|++|++ .+ +|. .|+..
T Consensus 552 G~~~~~~~~~~~~~~~~a~~~~~pE~f~g~~~~~P~gc~---~QAWS~a~~l~~~~~~~lg~~p~~~ 615 (641)
T COG3408 552 GLKDIQALELFDGLFSSASPGRIPELFDGDSPNRPKGCY---PQAWSSAEILRSLLQGLLGIKPDGF 615 (641)
T ss_pred CcccHHHHHHHHHHhhhcccCCCcccccccCCCCCCCcc---hhhhhHHHHHHHHHHHHhCCCcCcc
Confidence 9888 7777777755555667889999999876 88877 999999999983 33 666 77665
No 7
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=100.00 E-value=1.4e-47 Score=432.30 Aligned_cols=273 Identities=21% Similarity=0.260 Sum_probs=213.6
Q ss_pred CCCCCCCcccchhhHHHHHHH-hccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCC
Q 005783 222 KQPLNYDQVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDP 300 (677)
Q Consensus 222 a~~~~Y~~vwGRDt~Is~lgl-L~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~p 300 (677)
||-|||.. ||||+|||++|+ |.+|+++.||++|+.++ .++ .+|+|||.|.
T Consensus 286 AGypwF~~-WGRDt~Isl~Gl~l~tgr~~~A~~iL~~fa----------~~~-~~GliPN~~~----------------- 336 (575)
T TIGR01561 286 AGYHWFDD-WGRDSFISLEGLLLIDKQFDEAKEAILKFA----------NLC-KRGLIPNNFI----------------- 336 (575)
T ss_pred ecCchhcc-chhHHHHHHHHHHhcCCcHHHHHHHHHHHH----------HHh-HCCCCCCccC-----------------
Confidence 45678876 999999999997 57899999999999554 455 4899999773
Q ss_pred CCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHH-HhhcCCCccc--CcccccC--CCcccccc
Q 005783 301 DFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMN-LCLADGFDMF--PSLLVTD--GSCMIDRR 375 (677)
Q Consensus 301 d~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~-~~~~~gf~~y--~~Ll~~d--G~~WmD~r 375 (677)
+.|. .++||+||||||||+++++|+++|||.+++++. .+.++.|++ +..+++|.++ ..++... ..||||.+
T Consensus 337 ~~g~--~p~YntvDAtLWfi~al~~Y~~~tgD~~~l~~l--~p~l~~ii~~y~~G~~~~i~~d~dGLi~~g~~lTWMDa~ 412 (575)
T TIGR01561 337 AFGG--DPIYNGVDASLWAIHAIDKTFAYSQDFLFIRDV--VDKVLDIIDNYCAGNDFAIGMDNDLIFHKGAPLTWMDAK 412 (575)
T ss_pred CCCC--CccCCCchHHHHHHHHHHHHHHHhCCHHHHHHH--HHHHHHHHHHHhcCCCcEEEECCCccEeCCCCCCCCCCC
Confidence 3333 257899999999999999999999999999872 344555555 5567888765 2234333 36899975
Q ss_pred ------cCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccc
Q 005783 376 ------MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYS 449 (677)
Q Consensus 376 ------~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~ 449 (677)
.||+|+|||||||||+||+.+++|++.+++ . +..+.+.++++|++|++.||+++.+.
T Consensus 413 ~g~~~~tPR~G~~VEInALwYnAL~~~a~la~~~g~--~---a~~y~~~A~~lk~~F~~~FW~~~~g~------------ 475 (575)
T TIGR01561 413 VDERAVTPRAGAACEINALWYNALKTAEFLGNELGE--D---AESLEEKAAGVAKNFAEKFINPDGNC------------ 475 (575)
T ss_pred CCCccCCCCCCccHHHHHHHHHHHHHHHHHHHHhCc--c---HHHHHHHHHHHHHHHHHhcCCCCCCe------------
Confidence 589999999999999999999999998863 2 34577788889999999999875331
Q ss_pred hhhhcccCCCCCCccccccccccCCCC---eeeccccCCccCcccccccchhhhhcCCCCHH-HHHHHHHHHHHhhhhhc
Q 005783 450 TDATNKFNIYPEQIPSWLMDWIPEEGG---YLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK-QNESILNLIEAKWDDLV 525 (677)
Q Consensus 450 ~~a~n~fn~~p~~ip~~l~d~i~~~gg---Yl~g~v~p~~~D~r~dslGN~LAl~~gll~~e-qa~~Vv~~i~~~w~~Ll 525 (677)
+.|.+..++. .-...++|++ +++ +++++++++++ ++++|++.+++ +|+
T Consensus 476 -----------------l~D~v~~d~~~~~~~d~s~RPNq----l~A----~sL~~~ll~~~~~~~~vl~~v~~---~Ll 527 (575)
T TIGR01561 476 -----------------LFDLIHQDEAGNQVKDKAIRPNQ----IFA----ISLPFPIIDDESIAKAILDLIEK---DLL 527 (575)
T ss_pred -----------------eEEEEecCCCCCcccccccCCCc----eeH----hhCCCCCCCHHHHHHHHHHHHHh---hcc
Confidence 1112221111 1112234444 111 24578999999 99999999887 999
Q ss_pred cCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHH
Q 005783 526 GHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLAC 574 (677)
Q Consensus 526 tp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al 574 (677)
||+|||+|+| .+++|+++|.|++..|+.+||||+||||++|.|+.|+
T Consensus 528 tp~GlRTLsp--~d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~G~y~~A~ 574 (575)
T TIGR01561 528 RPFGLKSLSR--DDPLYKGQYKGDALSRDTAYHNGSLPPWLHGALVKAR 574 (575)
T ss_pred CCcccccCCC--CCCCcCCCCCCCccccCCcCcCCCcCccchhhHHhhc
Confidence 9999999999 8899999999999999999999999999999999985
No 8
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=100.00 E-value=8.5e-47 Score=447.58 Aligned_cols=343 Identities=16% Similarity=0.201 Sum_probs=251.3
Q ss_pred CCCCCCC----cccchhhHHHHHHH-hccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCccccc
Q 005783 222 KQPLNYD----QVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEE 296 (677)
Q Consensus 222 a~~~~Y~----~vwGRDt~Is~lgl-L~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~ 296 (677)
||-|||. .+||||+|||++|+ |.+|+++.||++|+.++ .+. .+|+|||.+.
T Consensus 1025 AGyPwF~tg~mr~WGRDTfISLrGLlL~tGR~~eAk~ii~~fa----------~~l-r~GLIPNll~------------- 1080 (1464)
T TIGR01531 1025 AGLPHFSVGYMRCWGRDTFIALRGMLLTTGRFDEARAIILAFA----------GTL-RHGLIPNLLD------------- 1080 (1464)
T ss_pred ecCCccccCcccccchhheeecCcceeccCCHHHHHHHHHHHH----------HHH-HcCCCCCCCC-------------
Confidence 5667776 89999999999996 69999999999998554 444 5899999662
Q ss_pred ccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCC-hhHHhhh--------------------cHHHHHHHHHHHhh-c
Q 005783 297 VLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGD-YALQERV--------------------DVQTGIKLIMNLCL-A 354 (677)
Q Consensus 297 ~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD-~~fl~~~--------------------~vq~al~~Il~~~~-~ 354 (677)
+ |. .++|+++||+||||+++++|++.++| .+++++. .+.+.|+.|++.+. +
T Consensus 1081 ----~-G~--~prYNt~DA~lWfi~AIqdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iqeIl~~h~~G 1153 (1464)
T TIGR01531 1081 ----E-GI--NPRYNCRDAAWFWLQCIQDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIYEALQKHFQG 1153 (1464)
T ss_pred ----C-CC--cccccCccHHHHHHHHHHHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHcC
Confidence 2 43 24689999999999999999999999 4554321 23456666665443 3
Q ss_pred CCC------------------cc-----cCcccccCC-----Ccccc-------cc------cCCCCCchhhHHHHHHHH
Q 005783 355 DGF------------------DM-----FPSLLVTDG-----SCMID-------RR------MGIHGHPLEIQALFYTAL 393 (677)
Q Consensus 355 ~gf------------------~~-----y~~Ll~~dG-----~~WmD-------~r------~gr~G~pVEIQALwY~AL 393 (677)
..| +. +.++++-.| .|||| ++ +||.|+|||||||||+||
T Consensus 1154 ~~fRE~NAGp~iD~~M~deGfn~~I~vD~~~GLI~gGn~~ncgTWMDkmg~SekA~~~G~p~TPRdG~aVEInaLwynAL 1233 (1464)
T TIGR01531 1154 IQFRERNAGPQIDRVMTDEGFNVTIGVDWETGFIYGGNRFNCGTWMDKMGESEKAGNKGIPATPRDGAAVEIVGLLKSAL 1233 (1464)
T ss_pred CccccccccccchhhhccccccceEEEcCCCCcEecCCCCCCCCCcCCCCcccccccCCcccCCCCCCceeHHHHHHHHH
Confidence 333 21 123333233 48999 32 589999999999999999
Q ss_pred HHHHHHHhhc-----CCCCChHHHHHHHHHHHHHHHHHHHhhhhhhh--hhhhhhhccccccchhhhcccCCCCCCcccc
Q 005783 394 RCSREMLTVS-----DGSGSNNLVRAINNRLSALSFHIREYYWVDMK--KINEIYRYKTEEYSTDATNKFNIYPEQIPSW 466 (677)
Q Consensus 394 r~aaeLa~~l-----g~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~--~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~ 466 (677)
+.+++|++.. |. +.....+.+.++.++++|++.||+++. .+|.+ -...+|+.+||-|..
T Consensus 1234 ~~~~~l~~~~~~~~~g~---~~~~~~~~~wa~~ik~~Fe~~F~~~~~~~~lyDv--------~~~~vnrrgIykD~~--- 1299 (1464)
T TIGR01531 1234 RFLIELKEKGVFKRSGV---ETQKWSYIEWNQKIQDNFEKRFFVDESQDADYDV--------AKLGVNRRGIYKDSY--- 1299 (1464)
T ss_pred HHHHHHHHhcCcCcCCc---ccchhhHHHHHHHHHHHHhhhcCCCcccCccccc--------cchhhcccccccccc---
Confidence 9999999865 32 111223556677789999999999532 22211 112334445544332
Q ss_pred ccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeec
Q 005783 467 LMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIIT 546 (677)
Q Consensus 467 l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t 546 (677)
.+..+|-...++|++ ..+ ++++..+++++++.++++.+ + +|+||+|||+|+| .+++|+++|
T Consensus 1300 -----~s~~~~~D~qlRPN~----~iA----~sla~~l~~~~~a~~~L~~v-~---~LltP~GlRTLdP--~D~~Y~g~Y 1360 (1464)
T TIGR01531 1300 -----GSTKPWTDYQLRPNF----AIA----MTVAPELFVPEKAWKALTIA-E---VLLGPLGMKTLDP--SDWNYRGYY 1360 (1464)
T ss_pred -----CCCCCCCCcccCCCc----eEE----EeCCcccCCHHHHHHHHHHH-H---HhccCCccccCCC--CCcCCCCcc
Confidence 222334444566665 222 35678899999999999999 6 8999999999999 899999999
Q ss_pred CCCCCCCCC------ccccCCCchhhHHHHHHHHHHhCCh----H------HHHHHHHHHHhhCC---CCCCCccccCCC
Q 005783 547 GSDPKNTPW------SYHNGGSWPTLLWQFTLACIKMGRL----G------LAQKAVALAENRLP---LDHWPEYYDTRT 607 (677)
Q Consensus 547 ~g~~~~rP~------sYHNGgVWP~l~wl~a~al~r~G~~----~------~A~~ll~~a~~~l~---~~~~pE~FDG~t 607 (677)
.++...++. +||||++|||++|.|+.|++|.+.. + .+++.+.....++. -+++||+|||+.
T Consensus 1361 ~g~~dsrD~~t~kg~aYHqG~eW~WllG~fl~A~lk~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~g~l~El~dgdg 1440 (1464)
T TIGR01531 1361 NNGEDSDDFATAKGRNYHQGPEWVWPIGYFLRARLHFHFKTGPRCQAAAIKPVSYLLQQLYYHLKESPWRGLPELTNKDG 1440 (1464)
T ss_pred CCchhhccccccccccccCCCcCccchhHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCC
Confidence 999999987 9999999999999999999996432 2 23444445444443 468999999987
Q ss_pred C-CccCCCCCccchHhHHHHHHHHH
Q 005783 608 G-RFTGKQSRLFQTWTIAGFLTSKM 631 (677)
Q Consensus 608 g-~p~G~~ac~~QAWSaA~~L~a~~ 631 (677)
+ .|.||+ .||||+|++|+++.
T Consensus 1441 p~~~~gc~---aQAWSvaelLr~l~ 1462 (1464)
T TIGR01531 1441 EYCNDSCP---TQAWSVACLLELLY 1462 (1464)
T ss_pred CCCCCCCH---HHHHHHHHHHHHHh
Confidence 5 788888 99999999999854
No 9
>PRK10137 alpha-glucosidase; Provisional
Probab=100.00 E-value=2.9e-33 Score=322.83 Aligned_cols=376 Identities=13% Similarity=0.086 Sum_probs=271.8
Q ss_pred CCcchHHHHHHHHHHHHhHhhhc--cccceeeeccCCCCCCCCCCCc--ccchhhHHHHHHHhccCChHHHHHHHHHHHh
Q 005783 185 KREETEIEKEAWRLLQEAVVTYC--ESPIGTVAANDPGDKQPLNYDQ--VFIRDFVPSALAFLLKGEGEIVRNFLLHTLQ 260 (677)
Q Consensus 185 ~~~~~~~~~~A~~lLr~~~~~~~--~~p~G~iAa~~~~~a~~~~Y~~--vwGRDt~Is~lglL~~G~pEiar~~L~~l~~ 260 (677)
..+...+..+|.+.|+..-..-- ..-.|++++ ++++||.. .|+||+.+.++|++.. +||+|++.|+.++.
T Consensus 303 ~~~~~~l~~kA~~~L~~Nwr~~~g~~~~~~t~Ps-----~gl~Wf~~~~~W~WDS~~~A~~la~f-dpelA~~~lr~Lf~ 376 (786)
T PRK10137 303 TPEQTRVAVKAMETLNGNWRSPAGAVKFNTVTPS-----VTARWFSGNQTWPWDTWKQAYAMAHF-NPDVAKENIRAVFS 376 (786)
T ss_pred CHHHHHHHHHHHHHHHHhccccccccccCceEeC-----CCCCCCCCCCccchHHHHHHHHHhhc-CHHHHHHHHHHHHH
Confidence 55677788888888887211000 011357777 78999999 9999999999998865 89999999999999
Q ss_pred hccccccccccCC-CCCCCCCcceeccccCCCcccccccCCC-CCCCCCCcccC-CCcHHHHHHHHHHHHHHhCChhHHh
Q 005783 261 LQSWEKTVDCYSP-GQGLMPASFKVRNVPLESNKFEEVLDPD-FGESAIGRVAP-VDSGLWWIILLRAYGKITGDYALQE 337 (677)
Q Consensus 261 lQs~e~~~~~~~~-~~G~iP~sfki~h~e~~~~~~e~~l~pd-~Ge~a~~~ygs-VDAtLWfIial~~Y~~~TGD~~fl~ 337 (677)
.|.+.. +..++ .+|+||+.+ -| + ..|+ .|+.+. .++ .=..+.+.+++++++++|+|.+|++
T Consensus 377 ~Q~~~~--d~~r~~~~G~Iph~v--f~-----~-----~~p~R~g~~~~--~ne~~tqPPL~a~av~~vy~~t~d~~fl~ 440 (786)
T PRK10137 377 WQIQPD--DSVRPQDVGFVPDLI--AY-----N-----LSPERGGDGGN--WNERNTKPSLAAWSVMEVYNVTQDKAWLA 440 (786)
T ss_pred hhcccc--CCCCcCCCCeeeEEe--cc-----C-----CCccccccccc--ccCCCcCcCHHHHHHHHHHHHhCCHHHHH
Confidence 998765 55553 689999853 12 0 1123 233221 111 2245899999999999999999999
Q ss_pred h--hcHHHHHHHHHHHhh--cCCCcccCcc---------------------------ccc------------------CC
Q 005783 338 R--VDVQTGIKLIMNLCL--ADGFDMFPSL---------------------------LVT------------------DG 368 (677)
Q Consensus 338 ~--~~vq~al~~Il~~~~--~~gf~~y~~L---------------------------l~~------------------dG 368 (677)
+ |.+.+..+|++...+ ++|+.+|..- +.+ ..
T Consensus 441 ~lyPkL~a~h~Ww~~~RD~dg~Gl~eY~~~~~~~h~~~~g~~~~~i~~~~~~~~~~G~~n~~~~~~~~~~~~~~~~~~~~ 520 (786)
T PRK10137 441 EMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVA 520 (786)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceeEeecccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9 888888888887764 5677776311 000 00
Q ss_pred Ccc---cc---------c-ccC---------------------CCC-------C--chhhHHHHHHHHHHHHHHHhhcCC
Q 005783 369 SCM---ID---------R-RMG---------------------IHG-------H--PLEIQALFYTALRCSREMLTVSDG 405 (677)
Q Consensus 369 ~~W---mD---------~-r~g---------------------r~G-------~--pVEIQALwY~ALr~aaeLa~~lg~ 405 (677)
..| || . +++ ..| . +|++|++.|.+.+.+++|++.+|.
T Consensus 521 ~~WESGmDNap~f~~i~~~~~~~y~r~~y~r~~~~V~~~~~~~~dg~l~~~p~~~e~VDLNsyLy~a~~~LA~LAe~LG~ 600 (786)
T PRK10137 521 ASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGK 600 (786)
T ss_pred CCCCCCCCCccccccccccccchhhhccccccceeeeehhcccCCCCccCCCCcCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 123 33 0 000 111 2 689999999999999999999974
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCC
Q 005783 406 SGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPA 485 (677)
Q Consensus 406 ~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~ 485 (677)
.+.+++++++++.+++.|++.||+++.++|.=|.-.+.. . .....|-+
T Consensus 601 ---~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY~DydL~~~~--------~--------------~~~~~g~~------- 648 (786)
T PRK10137 601 ---PEEAKRYRQLAQQLADYINTCMFDETTGFYYDVRIEDKP--------L--------------ANGCAGKP------- 648 (786)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHccCCcCCeEEEEecCccc--------c--------------cccccCcc-------
Confidence 567778899999999999999999887654110000000 0 00000000
Q ss_pred ccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchh
Q 005783 486 HMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPT 565 (677)
Q Consensus 486 ~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~ 565 (677)
...+....+++++|++|+++++|+++|++.+..+ +.+.+++|++++++ .++.++|..||||+|||.
T Consensus 649 -i~~~~~~~agf~PLwaGia~~eqA~~VV~~L~~p-~~F~t~~GipTlS~------------s~p~ydp~~YWRGpVWpp 714 (786)
T PRK10137 649 -IVERGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAAL------------TNPAFGADIYWRGRVWVD 714 (786)
T ss_pred -eeeeccCccchhhccCCCCCHHHHHHHHHHhcCh-hhcCCCCCccCcCC------------CccccCCCCCCCCCcCHh
Confidence 0011223466789999999999999999999854 35667788988866 467888999999999999
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHH----hhCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHH
Q 005783 566 LLWQFTLACIKMGRLGLAQKAVALAE----NRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKM 631 (677)
Q Consensus 566 l~wl~a~al~r~G~~~~A~~ll~~a~----~~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~ 631 (677)
++|+++.||.++|+.++|+++..... .....+.+.|+||+.||++.|+. .|+||+|.+|+++.
T Consensus 715 ~N~Li~~GL~rYG~~e~A~~La~~ll~~a~~l~~tG~~~E~YDp~TGeg~Ga~---~FSWTAAvlLml~~ 781 (786)
T PRK10137 715 QFYFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAP---NFSWSAAHLYMLYN 781 (786)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCCcccCCC---CCChHHHHHHHHHH
Confidence 99999999999999999999886532 24568899999999999999998 99999999888775
No 10
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.7e-25 Score=253.15 Aligned_cols=349 Identities=19% Similarity=0.267 Sum_probs=229.1
Q ss_pred CCCcccchhhHHHHHHH-hccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCC
Q 005783 226 NYDQVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (677)
Q Consensus 226 ~Y~~vwGRDt~Is~lgl-L~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge 304 (677)
+|..|||||++|++.|+ |.+|+...||++++.++ +++ ..|+|||-. |-|
T Consensus 1078 g~mRcWGRDtFIaLrG~ll~TGRy~EAr~iIlaFa------~tl-----rHGLIPNLL------------------d~G- 1127 (1521)
T KOG3625|consen 1078 GIMRCWGRDTFIALRGILLITGRYVEARNIILAFA------GTL-----RHGLIPNLL------------------DEG- 1127 (1521)
T ss_pred hhhhhcccceeeecccceEeecchHHHHHHHHHHH------HHh-----hccccchhh------------------hcc-
Confidence 67799999999999996 58999999999998665 232 589999933 112
Q ss_pred CCCCcccCCCcHHHHHHHHHHHHHHhCC-hhHHhh------------------------hcHHHHHHHHHHHh-------
Q 005783 305 SAIGRVAPVDSGLWWIILLRAYGKITGD-YALQER------------------------VDVQTGIKLIMNLC------- 352 (677)
Q Consensus 305 ~a~~~ygsVDAtLWfIial~~Y~~~TGD-~~fl~~------------------------~~vq~al~~Il~~~------- 352 (677)
-.++|++=||+.||+.++++|++...+ .+++++ ..++++|+.-.+.+
T Consensus 1128 -~~~RyNcRDA~W~wl~~Iq~Yve~vPnG~~ILkd~VsRiyP~DDs~v~~pgaf~q~L~evi~Eal~kH~qGiqfRErnA 1206 (1521)
T KOG3625|consen 1128 -IYARYNCRDAVWWWLQCIQDYVEMVPNGLDILKDPVSRIYPTDDSAVLPPGAFDQPLFEVIQEALQKHFQGIQFRERNA 1206 (1521)
T ss_pred -ccccccchHHHHHHHHHHHHHHHhCCChhhhhhCchheeCCCCCcccCCCchhhHHHHHHHHHHHHHHhccccchhccC
Confidence 235899999999999999999876432 122222 11222332221111
Q ss_pred --------hcCCCccc-----CcccccCC-----Ccccccc-------------cCCCCCchhhHHHHHHHHHHHHHHHh
Q 005783 353 --------LADGFDMF-----PSLLVTDG-----SCMIDRR-------------MGIHGHPLEIQALFYTALRCSREMLT 401 (677)
Q Consensus 353 --------~~~gf~~y-----~~Ll~~dG-----~~WmD~r-------------~gr~G~pVEIQALwY~ALr~aaeLa~ 401 (677)
...||+.. .++++-.| .||||-- .||.|..||+|+|-|.|||++.+|..
T Consensus 1207 GpqiD~~M~DeGFnv~~gV~~~TGfv~GGn~~NCGTWMDKMGeSerAgnkG~PaTPRDGsAVEi~GL~~salrfl~elke 1286 (1521)
T KOG3625|consen 1207 GPQIDRNMKDEGFNVTAGVDEETGFVYGGNRFNCGTWMDKMGESERAGNKGIPATPRDGSAVEIVGLSKSALRFLLELKE 1286 (1521)
T ss_pred CcccchhhhccCcceeeccccccceeecCCccccchhhhhcccchhccCCCCCCCCCCCceeehhhhHHHHHHHHHHHHh
Confidence 12456542 24444444 4799862 36889999999999999999999987
Q ss_pred hc-----C--CCC-ChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccC
Q 005783 402 VS-----D--GSG-SNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPE 473 (677)
Q Consensus 402 ~l-----g--~~~-~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~ 473 (677)
.. + .++ .+...-.+...+..++++|.+.|.+++.... ..+-....+|+..||-|+.+ .
T Consensus 1287 k~ifpy~~Ve~k~~g~~~k~s~~eW~qkiqdNFeK~ffV~ed~s~------~~~~~~~~vnkr~IykDsyg--------a 1352 (1521)
T KOG3625|consen 1287 KNIFPYHGVEVKRHGKAIKWSYDEWNQKIQDNFEKLFFVSEDPSD------LNEKHPNLVNKRGIYKDSYG--------A 1352 (1521)
T ss_pred cCCccccceEEecccccceecHHHHHHHHHhhhhheecccCCcch------hhhhcccccchhheeccccc--------C
Confidence 52 1 000 0011111333445589999999999775310 11112234567777666632 2
Q ss_pred CCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCC
Q 005783 474 EGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNT 553 (677)
Q Consensus 474 ~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~r 553 (677)
..+|..-.++|+. +-++.+.-.|.+|+.|-+.++..++ -|++|.|||+|-| +|+.|+++|..+....
T Consensus 1353 t~~~tDyQLR~NF--------~IamtVAPeL~~pe~A~kAle~Aek---vLlGPlGMkTlDP--~D~nYr~yYdN~~Ds~ 1419 (1521)
T KOG3625|consen 1353 TSPWTDYQLRPNF--------TIAMTVAPELFTPEKAWKALEIAEK---VLLGPLGMKTLDP--DDWNYRGYYDNALDSD 1419 (1521)
T ss_pred CCCccceeccCCc--------eeEEEechhhcChHHHHHHHHHHHH---HhcCcccccccCh--hhcccccccCCCcccc
Confidence 2233333344443 2123345567899999999998887 8999999999999 7899999996654443
Q ss_pred C------CccccCCCchhhHHHHHHHHHHhCC----hHHHHHH------HHHHHhhCCC---CCCCccccCCCCCccCCC
Q 005783 554 P------WSYHNGGSWPTLLWQFTLACIKMGR----LGLAQKA------VALAENRLPL---DHWPEYYDTRTGRFTGKQ 614 (677)
Q Consensus 554 P------~sYHNGgVWP~l~wl~a~al~r~G~----~~~A~~l------l~~a~~~l~~---~~~pE~FDG~tg~p~G~~ 614 (677)
+ +-||+|+-|-|+.|.|..|.+..++ ...+..+ |..+..++.. -++||+=. .+|+.++-
T Consensus 1420 d~~takG~NYHQGPEWlw~~GyfLrArl~f~~k~gp~~~~y~i~qv~~rL~~h~k~l~~S~WrgLpELTN-~ngeyC~d- 1497 (1521)
T KOG3625|consen 1420 DYNTAKGFNYHQGPEWLWPIGYFLRARLYFSRKMGPETTAYTIVQVKNRLSRHYKHLERSPWRGLPELTN-ENGEYCPD- 1497 (1521)
T ss_pred chhhhccccccCCCceeehhHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhccccCchhhcc-CCcCcccc-
Confidence 3 5699999999999999999776542 2233222 2233444433 38999865 34555543
Q ss_pred CCccchHhHHHHHHHHHHhc
Q 005783 615 SRLFQTWTIAGFLTSKMLVE 634 (677)
Q Consensus 615 ac~~QAWSaA~~L~a~~lL~ 634 (677)
+|..||||+|.+|-+..-|.
T Consensus 1498 Sc~tQAWSvacile~~ydL~ 1517 (1521)
T KOG3625|consen 1498 SCETQAWSVACILETLYDLW 1517 (1521)
T ss_pred cchHhHHHHHHHHHHHHHHh
Confidence 78899999999987766543
No 11
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.93 E-value=5.4e-24 Score=244.08 Aligned_cols=334 Identities=16% Similarity=0.163 Sum_probs=217.6
Q ss_pred HHHHHHHhHhhhc---ccc-ceeeeccCCCC--CCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccc
Q 005783 195 AWRLLQEAVVTYC---ESP-IGTVAANDPGD--KQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTV 268 (677)
Q Consensus 195 A~~lLr~~~~~~~---~~p-~G~iAa~~~~~--a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~ 268 (677)
-|.++++|++.++ ..+ ++++|++..++ .....|..+|.||+..++.+++..|.++.|+.+|.++++.|..++.
T Consensus 254 ~~~~~~~Sll~Lk~~~~~~~GaiiAs~s~~~~~~~~~~Y~y~W~RD~~~~a~Al~~~G~~~~a~~~l~~l~~~q~~~G~- 332 (616)
T TIGR01577 254 IYSLYRRSLAVLRLLTDGEYGSMIAAPEFDEDFVRCGGYAYCWGRDASYIATALDRAGYHDRVDRFFRWAMQTQSRDGS- 332 (616)
T ss_pred HHHHHHHHHHHHHhccCCCCCcEEEcCCCCcccccCCCCceeccccHHHHHHHHHHCCCHHHHHHHHHHHHHhhCcCCC-
Confidence 3455666655443 223 67888865432 1223599999999999999999999999999999999988876543
Q ss_pred cccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh--hcHHHHHH
Q 005783 269 DCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIK 346 (677)
Q Consensus 269 ~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~~vq~al~ 346 (677)
.+..+. . . |+. .| .. .-...|.+-..++++++|++.|+|.+|+++ +.++++++
T Consensus 333 ---------~~~~~~-~--d-----G~~--~~-~~-----~~~Q~D~~g~~l~al~~y~~~t~d~~~~~~~~~~v~~a~~ 387 (616)
T TIGR01577 333 ---------WQQRYY-L--N-----GRL--AP-LQ-----WGLQIDETGSILWAMDQHYRLTNDRAFLEEIWESVQKAAQ 387 (616)
T ss_pred ---------cceEEe-c--C-----CCC--CC-CC-----CCccccchhHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 233221 0 0 110 11 00 011334444455699999999999999987 44445555
Q ss_pred HHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHH
Q 005783 347 LIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHI 426 (677)
Q Consensus 347 ~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f 426 (677)
++++.... + .+ .++-.-|- .|.|..++++|++|.||+++++||+.++. .+.++++++.++.+++.|
T Consensus 388 fl~~~~~~-~---l~---~~~~~lWE----er~G~~~~t~a~~~aAL~~aa~lA~~lGd---~~~a~~~~~~Ad~ik~~i 453 (616)
T TIGR01577 388 YLILFIDP-E---TP---LPCRDLWE----EREGVFTYTASAVYGGLDAAAAVADKLGE---KRLAQNWKKAAEFIKRAV 453 (616)
T ss_pred HHHHhccC-C---CC---CCCCccce----ecCCccCccHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHH
Confidence 44443211 1 11 12223464 24678899999999999999999999974 467788889999999999
Q ss_pred HHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchh--hhhcCC
Q 005783 427 REYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLW--SIVSSL 504 (677)
Q Consensus 427 ~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~L--Al~~gl 504 (677)
+++||+++.+.+ ...+++...|..+|+ .+| ++++|+
T Consensus 454 ~~~~w~~~~g~F----------------------------------------~~~~~~~~~~~~vDa--SlL~l~~~~g~ 491 (616)
T TIGR01577 454 EERFWLPERQVF----------------------------------------AKGIKLMVLDKTIDI--SILGISVPFNL 491 (616)
T ss_pred HHhccCCCCCEE----------------------------------------EEeecCCCCCCcccH--HHHhHHHhcCC
Confidence 999998654321 111111111111232 133 345898
Q ss_pred CCHH--HHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChH-
Q 005783 505 GTPK--QNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLG- 581 (677)
Q Consensus 505 l~~e--qa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~- 581 (677)
++++ +....++.|++ +|.+|- +.+|. +|+.-.|+.|+.|.--.--++.++++.|+.+
T Consensus 492 l~~~Dpr~v~Tv~~I~~---~L~~~~----------~ggi~-------RY~~D~y~~g~~w~i~T~wla~~~~~~g~~~~ 551 (616)
T TIGR01577 492 IAPDDERMVKMAEAIEK---HLTSPI----------VGGIK-------RYENDPYVGGNPWILTTLWLSQLYIKQGRILK 551 (616)
T ss_pred CCCCChHHHHHHHHHHH---HhcccC----------CCeee-------CCCCCCCCCCCcHHHHHHHHHHHHHHhccccc
Confidence 7764 44555888876 665431 11221 2222256667644444334488888888765
Q ss_pred ------------HHHHHHHHHHhh-CCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHh
Q 005783 582 ------------LAQKAVALAENR-LPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLV 633 (677)
Q Consensus 582 ------------~A~~ll~~a~~~-l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL 633 (677)
+|+++++.+..+ ...|-+||.+|+.+|+|.|.. ||+||+|+++.+...|
T Consensus 552 ~~~~~~~~~~~~~A~~ll~~~~~~~~~~Gll~Eqvd~~~g~~~g~~---Pl~wSHa~~i~a~~~l 613 (616)
T TIGR01577 552 ALNHNGADIYLQKSKKLLKWVMDHRTDLGLLPEQVDKETGKPAWAV---PLGWSHAMFLLTVLDL 613 (616)
T ss_pred ccccchhhhHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCCCCcC---CcccchHHHHHHHHHH
Confidence 788888775554 457889999999999999877 9999999999887655
No 12
>PRK13271 treA trehalase; Provisional
Probab=99.83 E-value=8.6e-19 Score=198.35 Aligned_cols=309 Identities=15% Similarity=0.179 Sum_probs=215.8
Q ss_pred CCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCC
Q 005783 224 PLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFG 303 (677)
Q Consensus 224 ~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~G 303 (677)
...|..++.=|+-.+++|+|..|..++||+.+..|+.+- ..-|.|||-.++-.
T Consensus 154 GGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~~i----------~~yG~IPNg~R~YY----------------- 206 (569)
T PRK13271 154 GGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEI----------DTWGHIPNGNRSYY----------------- 206 (569)
T ss_pred CCCcchhhhhHHHHHHHhhHhcCCHHHHHHHHHHHHHHH----------HHhCcCcCCchhhc-----------------
Confidence 357999999999999999999999999999998777321 24799999554221
Q ss_pred CCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh--hcHHHHHHHHHHHhhc-----------------CCCcc--c--
Q 005783 304 ESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLA-----------------DGFDM--F-- 360 (677)
Q Consensus 304 e~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~~vq~al~~Il~~~~~-----------------~gf~~--y-- 360 (677)
=+=-..+.|..-+..|++.|+| +++++ |.+++=.++ |+.+ +++.+ |
T Consensus 207 -------l~RSQPP~l~~Mv~~~~~~~~~-~~l~~~lp~l~kEy~~---Wm~~~~~~~~~~~~~r~v~~~~~~~L~rY~~ 275 (569)
T PRK13271 207 -------LSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAY---WMEGVENLQPGQQEKRVVKLQDGTLLNRYWD 275 (569)
T ss_pred -------ccCCCChhHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHH---HhCCCcccCccccccceEEeCCCCccccccc
Confidence 1122557788888899988888 47665 322222222 3321 22222 1
Q ss_pred ----C-------cccc--------------------cCC----CcccccccC------CCCCchhhHHHHHHHHHHHHHH
Q 005783 361 ----P-------SLLV--------------------TDG----SCMIDRRMG------IHGHPLEIQALFYTALRCSREM 399 (677)
Q Consensus 361 ----~-------~Ll~--------------------~dG----~~WmD~r~g------r~G~pVEIQALwY~ALr~aaeL 399 (677)
| .+.. ..| +-|+.-... .+=.||+.|||+|++.+.++++
T Consensus 276 ~~~~PRpEsy~eD~~~a~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~~i~t~~IiPVDLNALLy~ae~~LA~l 355 (569)
T PRK13271 276 DRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTIRTTSIVPVDLNALMFKMEKILARA 355 (569)
T ss_pred CCCCCCCCcHHHHHHHHhhCCcchHHHHHHHHHHHhhcCCcchhhhccCCccccccccccccCchHHHHHHHHHHHHHHH
Confidence 0 0000 001 114421100 1226899999999999999999
Q ss_pred HhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeee
Q 005783 400 LTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLI 479 (677)
Q Consensus 400 a~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~ 479 (677)
++.+|. .+.+..++++++++++.|++.||+++.+.+ +
T Consensus 356 a~~lGd---~~~A~~y~~~A~~rr~AI~~~LWnee~G~f----------------------------------------~ 392 (569)
T PRK13271 356 SKAAGD---NAMANQYETLANARQKAIEKYLWNDKEGWY----------------------------------------A 392 (569)
T ss_pred HHHhCC---hhhHHHHHHHHHHHHHHHHHhcccCCCCEE----------------------------------------E
Confidence 999974 456667888999999999999998765432 1
Q ss_pred cc-ccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccc
Q 005783 480 GN-LQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYH 558 (677)
Q Consensus 480 g~-v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYH 558 (677)
++ +..+... ..++..+++++++|+++++|+++|++.+.+ +|++|.||.+..| ++..||
T Consensus 393 DYDl~~~~~r-~~~saa~f~PLwag~a~~~qA~~Vv~~l~~---~Ll~pgGLpTt~~-----------------~SgqQW 451 (569)
T PRK13271 393 DYDLKSHKVR-NQLTAAALFPLYVNAAAKDRANKVAAATKT---HLLQPGGLNTTSV-----------------KSGQQW 451 (569)
T ss_pred EEECCCCCEe-echhHHHHHhhhcCCCCHHHHHHHHHHHHH---hcCCCCCccCCCC-----------------CCCCCC
Confidence 11 1101100 134667788999999999999999999876 7888988887655 224799
Q ss_pred cCCC-chhhHHHHHHHHHHhCChHHHHHHHHHHHhh----C-CCCCCCccccC-CCCCccCCC---CCccchHhHHHHHH
Q 005783 559 NGGS-WPTLLWQFTLACIKMGRLGLAQKAVALAENR----L-PLDHWPEYYDT-RTGRFTGKQ---SRLFQTWTIAGFLT 628 (677)
Q Consensus 559 NGgV-WP~l~wl~a~al~r~G~~~~A~~ll~~a~~~----l-~~~~~pE~FDG-~tg~p~G~~---ac~~QAWSaA~~L~ 628 (677)
+|++ ||-+.|+++.||.++|..++|+++.....+. . ..+.+.|.||. .+|.+.|+. ....+.||.|.+|-
T Consensus 452 D~PngWaPlq~iiieGL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~G~~gGGGeY~~q~GFGWTNgV~L~ 531 (569)
T PRK13271 452 DAPNGWAPLQWVATEGLQNYGQKEVAMDVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLK 531 (569)
T ss_pred cCcccCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcccCceEEeeCCCCCCCCCCCCCCCCCCCcCcHHHHHHH
Confidence 9999 9999999999999999999999887542222 2 46889999998 466655432 34589999999887
Q ss_pred HHHHhc
Q 005783 629 SKMLVE 634 (677)
Q Consensus 629 a~~lL~ 634 (677)
+...+.
T Consensus 532 lL~~~~ 537 (569)
T PRK13271 532 MLDLIC 537 (569)
T ss_pred HHHhcC
Confidence 776554
No 13
>PLN02567 alpha,alpha-trehalase
Probab=99.79 E-value=4.8e-17 Score=184.51 Aligned_cols=332 Identities=13% Similarity=0.077 Sum_probs=220.8
Q ss_pred CCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCC
Q 005783 224 PLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFG 303 (677)
Q Consensus 224 ~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~G 303 (677)
...|..+|.=|+...++|+|..|..+.||+.+..|+.+|. ..|+|||-.+
T Consensus 147 GgRFrE~yyWDSy~i~~GLl~s~~~~~A~~mi~Nf~~~i~----------~~GfIPNg~R-------------------- 196 (554)
T PLN02567 147 GSRFREVYYWDSYWVIRGLLASKMYETAKGVVENLLYLVD----------TYGFVPNGAR-------------------- 196 (554)
T ss_pred CCCcCccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH----------HcCcCCCCCc--------------------
Confidence 3579999999999999999999999999999998886655 4789998432
Q ss_pred CCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh--hcHHHHHHHHHHHhhcC---------CC----cccC-------
Q 005783 304 ESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLAD---------GF----DMFP------- 361 (677)
Q Consensus 304 e~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~~vq~al~~Il~~~~~~---------gf----~~y~------- 361 (677)
.||=..=..|.+...+..|++.|+|.+|+++ |.+.+=.++ |+... |- ..|.
T Consensus 197 ----~Yyl~RSQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~---W~~~~~~v~i~~~~g~~~~L~rY~~~~~~Pr 269 (554)
T PLN02567 197 ----AYYTNRSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAF---WTSGRHTVTIRDANGVVHVLSRYYAMWDKPR 269 (554)
T ss_pred ----ccccCCCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH---HhcCCcceeeecCCCCcCCCcccccCCCCCC
Confidence 1333455779999999999999999999987 332222222 22211 11 1110
Q ss_pred ------cccc---------------------cCC----Ccccccc-----cC-CCCCchhhHHHHHHHHHHHHHHHhhcC
Q 005783 362 ------SLLV---------------------TDG----SCMIDRR-----MG-IHGHPLEIQALFYTALRCSREMLTVSD 404 (677)
Q Consensus 362 ------~Ll~---------------------~dG----~~WmD~r-----~g-r~G~pVEIQALwY~ALr~aaeLa~~lg 404 (677)
.... ..| +-|+.-. +- ..=.||..||+.|.+.+.+|+|++.+|
T Consensus 270 pEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~ti~t~~i~pVDLNa~L~~~e~~LA~la~~lG 349 (554)
T PLN02567 270 PESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNLTTLRTTSILPVDLNAFLLKMELDIAFFAKLLG 349 (554)
T ss_pred CccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhccccccccccccccccCccHHHHHHHHHHHHHHHHHHhC
Confidence 0000 001 0132110 00 011579999999999999999999997
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccC
Q 005783 405 GSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQP 484 (677)
Q Consensus 405 ~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p 484 (677)
. .+.+..+.++++.+++.|++.+|+++.+.+ |-|.... ++. ..+.-|- +.+
T Consensus 350 ~---~~~a~~~~~~A~~~~~aI~~~lWdee~G~y--~Dydl~~------~~~---------------~~~~~~~---~~~ 400 (554)
T PLN02567 350 D---KATAERFLKAAKARKRAINAVLWNEEMGQW--LDYWLPP------NGA---------------TCQESYT---WDA 400 (554)
T ss_pred C---hHHHHHHHHHHHHHHHHHHHHhcCcccCeE--Eeecccc------ccc---------------ccccccc---ccc
Confidence 4 466677888999999999999999887654 1110000 000 0000000 001
Q ss_pred CccCcccccccchhhhhcCCCCHH--HHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCC-
Q 005783 485 AHMDFRFFTLGNLWSIVSSLGTPK--QNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG- 561 (677)
Q Consensus 485 ~~~D~r~dslGN~LAl~~gll~~e--qa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGg- 561 (677)
.... +.+..+|+++|++|+++++ ++.++++.+... .++.|.|+.+ + ..++..||+|+
T Consensus 401 ~~~~-~~~~~s~f~PLw~g~~~~~~~~a~~v~~~l~~~--~l~~pgGipt---s--------------l~~sg~qWdgPn 460 (554)
T PLN02567 401 ENQN-TNVYASNFVPLWCGVVPPGDAKVEKVVESLKSS--GLVLPAGIAT---S--------------LRNTGQQWDFPN 460 (554)
T ss_pred cccc-cCccHHHHHHHHcCCCChhhHHHHHHHHHHHhc--cCccCCcccC---C--------------CCCccccCCCCC
Confidence 1100 1345678899999999985 678888888753 5666666632 0 23455799999
Q ss_pred CchhhHHHHHHHHHHhCChH---HHHHHHHH-----HHhhCCCCCCCccccCCCCCccCC----CCCccchHhHHHHHHH
Q 005783 562 SWPTLLWQFTLACIKMGRLG---LAQKAVAL-----AENRLPLDHWPEYYDTRTGRFTGK----QSRLFQTWTIAGFLTS 629 (677)
Q Consensus 562 VWP~l~wl~a~al~r~G~~~---~A~~ll~~-----a~~~l~~~~~pE~FDG~tg~p~G~----~ac~~QAWSaA~~L~a 629 (677)
+||-++|+++.||.++|..+ .|+++... .......+.+.|+||..++...|. ..-..|.||+|.+|.+
T Consensus 461 ~W~pl~~l~i~GL~~yG~~ea~~lA~~la~rwl~~~~~~~~~tg~m~EkYd~~~~~~~GgGGey~~q~GFGWTngV~L~l 540 (554)
T PLN02567 461 AWAPLQHMIVEGLAASGSKEGKALAEDIARRWLRSNYVAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSL 540 (554)
T ss_pred cCHhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCccccCCCCCCCCCCCcChHHHHHHHH
Confidence 99999999999999999865 67765432 233445789999999987544332 1223678999999888
Q ss_pred HHHhcCCCcCcc
Q 005783 630 KMLVENPEMASV 641 (677)
Q Consensus 630 ~~lL~~p~~~~~ 641 (677)
......|.+..+
T Consensus 541 l~~yg~~~~~~~ 552 (554)
T PLN02567 541 LEEFGWPEDKKL 552 (554)
T ss_pred HHHhCCcccCCC
Confidence 877777766554
No 14
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.77 E-value=1.2e-16 Score=183.33 Aligned_cols=333 Identities=17% Similarity=0.128 Sum_probs=218.8
Q ss_pred cceeeeccCCCC----CCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCC-CCCCccee
Q 005783 210 PIGTVAANDPGD----KQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQG-LMPASFKV 284 (677)
Q Consensus 210 p~G~iAa~~~~~----a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G-~iP~sfki 284 (677)
+++++|+++.+- .+.+.|..+|+||+.++++|++..|..+.++.++.++..+|..+..+......+| -++.++.
T Consensus 261 ~G~ivAs~t~~l~~~~~g~~dY~y~W~RD~~~~~~AL~~~G~~~~a~~~f~~l~~~~~~~~~~~~~y~~~g~~~~~~w~- 339 (612)
T COG3387 261 TGAIVASPTTSLPELIGGTRDYRYVWPRDASYAALALLAIGYKKEALRFFEFLPDVQTPNGKLYHKYSIDGSDLAESWL- 339 (612)
T ss_pred CCcEEEcCCCCccccCCCCCCceEEccCcHHHHHHHHHHcCCHHHHHHHHHHHHHhhCCCCceeeEEecCCCccccccc-
Confidence 578888875443 2222499999999999999999999999999999999999999876544443455 3333321
Q ss_pred ccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhh---cHHHHHHHHHHHhhcCCCcccC
Q 005783 285 RNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERV---DVQTGIKLIMNLCLADGFDMFP 361 (677)
Q Consensus 285 ~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~---~vq~al~~Il~~~~~~gf~~y~ 361 (677)
++. .++..++ --+|-+.|-.+++..|.+.++|.-+..+. .+..+...+.. +.... .
T Consensus 340 ---~~~-----------~~~~~~p--v~~~~~a~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~ 398 (612)
T COG3387 340 ---PVS-----------GYYNSFP--VRIGNTALVQGALDVYGSIMNDIYFYAKYYAIYILPAADYLRR-MEKIK----A 398 (612)
T ss_pred ---ccc-----------CCCCCCc--eEEcchhhHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH-HHhhh----c
Confidence 110 0111221 13456666667999999999998777652 22233333222 21110 1
Q ss_pred cccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 005783 362 SLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIY 441 (677)
Q Consensus 362 ~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~y 441 (677)
.+-.++.+.|= .|.|+-.+..+..|.||++++.||...+ ++..++.+...+..+++.+.+.++..+.+
T Consensus 399 ~~~~p~~~~WE----er~g~~~yt~~~~~agLd~A~~lA~~~g---d~~~a~~~~~~ad~ik~~v~~~~~~~~~~----- 466 (612)
T COG3387 399 NLPTPDFDLWE----ERGGHFTYTKATVYAGLDAAADLAEEFG---DKGSAEHWRKTADELKEAVLRRGYAEDGG----- 466 (612)
T ss_pred CCCCCccceec----ccCCcccchHHHHHHHHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHhcccccCC-----
Confidence 12223444452 3445679999999999999999999997 47788889999999999999888664432
Q ss_pred hccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchh-hhhcCCC--CHHHHHHHHHHHH
Q 005783 442 RYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLW-SIVSSLG--TPKQNESILNLIE 518 (677)
Q Consensus 442 r~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~L-Al~~gll--~~eqa~~Vv~~i~ 518 (677)
|+.-...+ ..|.-+|+ .+| +..+|++ +.++...+++.|+
T Consensus 467 -----------------------------------~f~r~~~~-~~~~~vDa--sll~l~~fg~i~~~D~~~~~t~~~I~ 508 (612)
T COG3387 467 -----------------------------------YFVRSLGR-KPDDTVDA--SLLGLVLFGFIPPDDPRILATVEAIE 508 (612)
T ss_pred -----------------------------------eeehhcCC-CccccccH--HHhhccccCccCCCCHHHHHHHHHHH
Confidence 11111110 00111221 122 2356764 4467888888888
Q ss_pred HhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccC-CCchhhHHHHHHHHHHhCChHHHHHHHHHHHh-hCCC
Q 005783 519 AKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNG-GSWPTLLWQFTLACIKMGRLGLAQKAVALAEN-RLPL 596 (677)
Q Consensus 519 ~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNG-gVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~-~l~~ 596 (677)
+ +|..+-+ +|+.|.. .+ ...+-++ +.||....-++.++...|+.++|+++++.... ....
T Consensus 509 ~---~L~~~~~-----------gi~RY~~---~~-~d~~~~~~~~w~i~t~Wl~~~~~~~g~~~~a~~ll~~l~~~a~~~ 570 (612)
T COG3387 509 R---ELLVDGG-----------GIRRYNN---EY-DDGLGGDNGPWIITTLWLSEYYLALGRLDEAKKLLEWLLAFASPL 570 (612)
T ss_pred H---HHhhcCC-----------cEEcCcc---cc-ccccCCCCCcceeehhHHHHHHHHccchHHHHHHHHHHHHhcCCC
Confidence 7 6665322 2332221 11 1111222 48888855559999999999999999987544 4567
Q ss_pred CCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhcC
Q 005783 597 DHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVEN 635 (677)
Q Consensus 597 ~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~ 635 (677)
+-+||.+|..+|+|.|.. |||||.|+++.+...|++
T Consensus 571 gll~EQv~~~~G~~~g~~---PlawSha~~I~ai~~l~~ 606 (612)
T COG3387 571 GLLPEQVDDGSGEPLGAF---PLAWSHAEFIIAIRELEE 606 (612)
T ss_pred CCcchhhcCCCCccCCCC---cchhhhHHHHHHHHHHHh
Confidence 889999999999999887 999999999998887653
No 15
>PRK13272 treA trehalase; Provisional
Probab=99.72 E-value=1.1e-15 Score=172.15 Aligned_cols=343 Identities=15% Similarity=0.134 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHhHhhhcccc--ceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhcccccc
Q 005783 190 EIEKEAWRLLQEAVVTYCESP--IGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKT 267 (677)
Q Consensus 190 ~~~~~A~~lLr~~~~~~~~~p--~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~ 267 (677)
+-+..-|..|-+... ..| ...++-+.|=.-....|..++.=|+-.+++|+|..|..++||+.+..|+.+-
T Consensus 122 ~~i~~lW~~L~R~~~---~~~~~~Sli~lp~p~iVPGGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~~i----- 193 (542)
T PRK13272 122 EHIDALWPKLVRSQE---QVPAHSSLLALPHPYVVPGGRFREVYYWDSYFTMLGLVKSGQTTLSRQMLDNFAYLI----- 193 (542)
T ss_pred HHHHHHHHHhccccC---CCCCcCccccCCCCeeecCCCccchhhhHHHHHHHhhhhcCcHHHHHHHHHHHHHHH-----
Confidence 445555666655332 222 2333333222122357999999999999999999999999999998777321
Q ss_pred ccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHH
Q 005783 268 VDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKL 347 (677)
Q Consensus 268 ~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~ 347 (677)
..-|.|||-.++- |=+=-..|.|..-+..|++.|||..+. + ..+.|+.
T Consensus 194 -----~~yGfIPNG~R~Y------------------------Yl~RSQPP~l~~Mv~~~~~~t~d~~~~-~--~lp~l~k 241 (542)
T PRK13272 194 -----DTYGHIPNGNRTY------------------------YLSRSQPPFFSYMVELQAGVEGDAAYQ-R--YLPQLQK 241 (542)
T ss_pred -----HHcCcCcCCchhc------------------------cccCCCchhHHHHHHHHHHhcChHHHH-H--HHHHHHH
Confidence 2469999954322 112225688888899999999998773 3 1122222
Q ss_pred HHH-Hhhc-----------------CCCcc--c------C-------ccccc--------------------CC----Cc
Q 005783 348 IMN-LCLA-----------------DGFDM--F------P-------SLLVT--------------------DG----SC 370 (677)
Q Consensus 348 Il~-~~~~-----------------~gf~~--y------~-------~Ll~~--------------------dG----~~ 370 (677)
=.+ |+.+ +++.+ | | ....+ .| +-
T Consensus 242 Ey~~Wm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsy~eD~~~a~~~~~~~~~~~Y~~l~a~aESGWDfSsR 321 (542)
T PRK13272 242 EYAYWMQGSDDLQPGQAARHVVRLADGSLLNRYWDERDTPRPEAWLHDTRTAAEAKDRPAAEVYRDLRAGAESGWDYSSR 321 (542)
T ss_pred HHHHHcCCCCCCCCccccceeEecCCCcchhhhcCCCCCCCChHHHHHHHHhcCcccCcHHHHHHHHHHHHhcCCCchhh
Confidence 223 3321 12211 1 0 00000 00 01
Q ss_pred ccc-cc-c----CCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 005783 371 MID-RR-M----GIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYK 444 (677)
Q Consensus 371 WmD-~r-~----gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~ 444 (677)
|+. .. + ...=.||..||+.|.+-+..+++++.+|. .+.++.++++++.+++.|++.+|++ .+.+
T Consensus 322 w~~~~~~L~~i~t~~IvpVDLNalL~~~e~~LA~~~~~lG~---~~~a~~~~~~A~~r~~aI~~~lWde-~G~~------ 391 (542)
T PRK13272 322 WLADGKTLASIRTTAIVPVDLNSLLYHLERTLAQACASSGL---AACSQDYAALAQQRKQAIDAHLWNP-AGYY------ 391 (542)
T ss_pred hccccccccccCcccccCccHHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHhccCc-CceE------
Confidence 331 10 0 01114899999999999999999999873 4667778889999999999999985 4432
Q ss_pred ccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhh
Q 005783 445 TEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDL 524 (677)
Q Consensus 445 te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~L 524 (677)
+.-++..+.. ...++.+|+++|++|+++++|++++++.+.. ++
T Consensus 392 ---------------------------------~DYD~~~~~~-~~~~s~a~f~PLwag~a~~~~a~~l~~~l~~---~~ 434 (542)
T PRK13272 392 ---------------------------------ADYDWQTRTL-SEQVTAAALYPLFAGLASDDRAKRTADSVRA---QL 434 (542)
T ss_pred ---------------------------------EeeccCCCCc-cccccHHHHHHHHcCCCCHHHHHHHHHHHHH---hc
Confidence 1101111111 0145678899999999999999999998876 56
Q ss_pred ccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCC-CchhhHHHHHHHHHHhCChHHHHHHHHHHHhhC-----CCCC
Q 005783 525 VGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG-SWPTLLWQFTLACIKMGRLGLAQKAVALAENRL-----PLDH 598 (677)
Q Consensus 525 ltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGg-VWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~l-----~~~~ 598 (677)
+.+.|+-+..| ++..||+|+ +||-+.|+++.||.++|..+.|+++.....+.. ..+.
T Consensus 435 l~~gGlpTt~~-----------------~sgqQWD~PN~WaPlq~i~i~GL~~yG~~~lA~~La~rwl~~~~~~~~~~g~ 497 (542)
T PRK13272 435 LRPGGLATTAL-----------------KTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTIGERFLAQVQALFAREHK 497 (542)
T ss_pred cCCCCcCCCCC-----------------CccccCCCCCccHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 66655543322 345799999 899999999999999999999998876532222 2679
Q ss_pred CCccccCCC-CCccC---CCCCccchHhHHHHHHHHHHhcCC
Q 005783 599 WPEYYDTRT-GRFTG---KQSRLFQTWTIAGFLTSKMLVENP 636 (677)
Q Consensus 599 ~pE~FDG~t-g~p~G---~~ac~~QAWSaA~~L~a~~lL~~p 636 (677)
+.|.||-.. +.+.| +.....|+||.|.+|.+...+..+
T Consensus 498 m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNgV~L~lL~~yg~~ 539 (542)
T PRK13272 498 LVEKYGLDGNAAGGGGGEYALQDGFGWTNGVTLMLLNLYPPG 539 (542)
T ss_pred eeEEeecCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHhccc
Confidence 999999432 21111 123348999999998877766544
No 16
>PRK13270 treF trehalase; Provisional
Probab=99.72 E-value=1.4e-15 Score=171.79 Aligned_cols=310 Identities=12% Similarity=0.151 Sum_probs=207.9
Q ss_pred CCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCC
Q 005783 225 LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (677)
Q Consensus 225 ~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge 304 (677)
..|..++.=|+-.+++|+|..|..++||+.+..|+.+- ..-|.|||-.++-.
T Consensus 167 GRFrE~YYWDSYwi~~GLl~sg~~~~a~~mi~Nf~~li----------~~yGfIPNG~R~YY------------------ 218 (549)
T PRK13270 167 GRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMI----------ENYGHIPNGNRTYY------------------ 218 (549)
T ss_pred CCcccchhhhHHHHHHHhhhcCcHHHHHHHHHHHHHHH----------HHcCcCcCCchhcc------------------
Confidence 57999999999999999999999999999998777321 24699999554221
Q ss_pred CCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHH-Hhhc-----------------CCCcc--c----
Q 005783 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMN-LCLA-----------------DGFDM--F---- 360 (677)
Q Consensus 305 ~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~-~~~~-----------------~gf~~--y---- 360 (677)
=+=-..|.|...+..|++ .|.+++++. .+.|+.=.+ |+.+ ++..+ |
T Consensus 219 ------l~RSQPP~l~~Mv~~y~~--~~~~~~~~~--lp~l~~E~~fWm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~ 288 (549)
T PRK13270 219 ------LSRSQPPVFALMVELFEE--DGVRGARRY--LDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDR 288 (549)
T ss_pred ------ccCCCCHhHHHHHHHHHh--cCHHHHHHH--HHHHHHHHHHHcCCCCccCcccccceeEecCCCCccccccCCC
Confidence 112245677777777776 456677651 123333223 2321 11111 1
Q ss_pred --C-------cccccC-------------------C----Ccccccc--cC----CCCCchhhHHHHHHHHHHHHHHHhh
Q 005783 361 --P-------SLLVTD-------------------G----SCMIDRR--MG----IHGHPLEIQALFYTALRCSREMLTV 402 (677)
Q Consensus 361 --~-------~Ll~~d-------------------G----~~WmD~r--~g----r~G~pVEIQALwY~ALr~aaeLa~~ 402 (677)
| .+...+ | +-|+.-. +. ..=.||..||+.|.+-+..++|++.
T Consensus 289 ~~PRpEsyreD~~~a~~~~rp~~~~Y~~lra~aESGWDfSsRW~~~~~~L~~i~T~~iipVDLNaiL~~~e~~LA~~a~~ 368 (549)
T PRK13270 289 DTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLYKLESAIANISAL 368 (549)
T ss_pred CCCCCchhHHHHHhhcccCCchHHHHHHHHHHHHcCCCchhhcccCCcccccccccCcchhhHHHHHHHHHHHHHHHHHH
Confidence 0 000000 0 0133110 00 0115899999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccc
Q 005783 403 SDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNL 482 (677)
Q Consensus 403 lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v 482 (677)
+|. .+.+..++++++.+++.|++.+|+++.+.+ +.-++
T Consensus 369 lG~---~~~a~~~~~~A~~r~~AI~~~LWnee~G~~---------------------------------------~DYD~ 406 (549)
T PRK13270 369 KGE---KETEALFRQKASARRDAVNRYLWDDENGIY---------------------------------------RDYDW 406 (549)
T ss_pred hCC---hHHHHHHHHHHHHHHHHHHHhccCcccCeE---------------------------------------Eeccc
Confidence 974 566777888999999999999998766543 11111
Q ss_pred cCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCC-
Q 005783 483 QPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG- 561 (677)
Q Consensus 483 ~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGg- 561 (677)
..+.. +.++.+|+++|++|+++++|++++++.+.. +++.+-|+- ++ .+++..||.|+
T Consensus 407 ~~~~~--~~~s~a~f~PLwaG~a~~~qa~~l~~~l~~---~ll~pGGl~---tS--------------~~~sgqQWD~PN 464 (549)
T PRK13270 407 RREQL--ALFSAAAIVPLYVGMANHEQADRLANAVRS---RLLTPGGIL---AS--------------EYETGEQWDKPN 464 (549)
T ss_pred ccCcc--ccccHHHHHHHHhCCCCHHHHHHHHHHHHH---hcccCCCcC---CC--------------CCCCcccCCCCC
Confidence 11111 245778899999999999999999999875 565543332 11 24567899999
Q ss_pred CchhhHHHHHHHHHHhCChHHHHHHHHHHHhhC-----CCCCCCccccCCCCCccCC-----CCCccchHhHHHHHHHHH
Q 005783 562 SWPTLLWQFTLACIKMGRLGLAQKAVALAENRL-----PLDHWPEYYDTRTGRFTGK-----QSRLFQTWTIAGFLTSKM 631 (677)
Q Consensus 562 VWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~l-----~~~~~pE~FDG~tg~p~G~-----~ac~~QAWSaA~~L~a~~ 631 (677)
+||-+.|+++.||.++|..+.|+++.....+.. ..+.+.|.||..++.+.|+ +.-..+.||.|.+|.+..
T Consensus 465 ~WaPlqwmiieGL~ryG~~~lA~~LA~rwl~~~~~~~~~~g~m~EKYdv~~~~g~~GgGGEY~~q~GFGWTNGV~l~~l~ 544 (549)
T PRK13270 465 GWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYQEHHKLIEKYHIAGGVPREGGGGEYPLQDGFGWTNGVVRRLIG 544 (549)
T ss_pred CCccHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCeeEEEecCCCCCCCCCCCCCcCCCCCcCcHHHHHHHHHH
Confidence 799999999999999999999998876532222 3688999999865432222 122389999999988876
Q ss_pred HhcCC
Q 005783 632 LVENP 636 (677)
Q Consensus 632 lL~~p 636 (677)
...+|
T Consensus 545 ~yg~~ 549 (549)
T PRK13270 545 LYGEP 549 (549)
T ss_pred HhCCC
Confidence 65543
No 17
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=99.71 E-value=7.1e-15 Score=169.45 Aligned_cols=360 Identities=14% Similarity=0.083 Sum_probs=208.5
Q ss_pred chHHHHHHHHHHHHhHhhhccccceeeeccCCCC----CCC--CCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhh
Q 005783 188 ETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGD----KQP--LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQL 261 (677)
Q Consensus 188 ~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~----a~~--~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~l 261 (677)
..+++++++-.||.. .++..++++|||+.++- .+. -.|..||.||+..++.+|+..|..+.++.++.++.+.
T Consensus 249 ~~~~~~rS~lvLK~~--~d~~~~GAiIAA~Tts~pe~~g~~~n~dYryvW~RD~a~~a~AL~~~G~~~~a~~~~~~l~~~ 326 (648)
T TIGR01535 249 GNSLYYVSMMILKAH--EDKTNPGAYIASLSIPWGDGQADDNTGGYHLVWPRDLYQVANAFLAAGDVDSALRSLDYLAKV 326 (648)
T ss_pred HHHHHHHHHHHHHHh--cCCCCCCcEEEecCCCCCccCCCCCCCceEEEehhhHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 344555555555442 12224588889874321 222 3599999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcH
Q 005783 262 QSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDV 341 (677)
Q Consensus 262 Qs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~v 341 (677)
|..++.+ +.... + + |+ +...+.+. |-+=..|++++.+++. +..+.. ..|
T Consensus 327 ~~~~G~~----------lq~y~---v--d---G~----~~~~~iQl------D~~g~~i~~~~~l~~~--~~~~~~-~~v 375 (648)
T TIGR01535 327 QQDNGMF----------PQNSW---V--D---GK----PYWTGIQL------DETAFPILLAYRLHRY--DHAFYD-KML 375 (648)
T ss_pred hccCCCc----------Cceec---c--C---CC----CCCCCccc------cHHHHHHHHHHHHHHc--CcHHHH-HHH
Confidence 8865532 22121 0 0 22 12223343 3444445677666553 322221 235
Q ss_pred HHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 005783 342 QTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSA 421 (677)
Q Consensus 342 q~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~ 421 (677)
+++++++++....+.++.|+ .|.|+-..+-|-.|.||.+|++||+..+. .+.++++.+.+..
T Consensus 376 k~aadfl~~~~p~p~~d~WE---------------er~g~~~~T~a~v~aaL~~Aa~iA~~~g~---~~~a~~w~~~Ad~ 437 (648)
T TIGR01535 376 KPAADFIVKNGPKTGQERWE---------------EIGGYSPSTLAAEIAGLTAAADIAEQNGD---AGSAQKYRETADN 437 (648)
T ss_pred HHHHHHHHHcCCCCCCCccc---------------ccCCcCchhHHHHHHHHHHHHHHHHHcCC---cHHHHHHHHHHHH
Confidence 56666655543233333333 23455567778888999999999999974 4678889899999
Q ss_pred HHHHHHHhhhhhh-----hhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCc-cCccccccc
Q 005783 422 LSFHIREYYWVDM-----KKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAH-MDFRFFTLG 495 (677)
Q Consensus 422 Lk~~f~~~FW~d~-----~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~-~D~r~dslG 495 (677)
+++.+.++.|.++ .+.| .|... +.. |+ +..-..+.+-++.. -+..+| +
T Consensus 438 i~~~i~~~~~~~~g~~~~~~~f--~r~~~--------------~~~-~~-------~~~~~~~~n~~~~~~~~~~vD--a 491 (648)
T TIGR01535 438 WQKLIENWTFTTNGPLGDGQYY--LRIAG--------------LGD-PN-------ADFLINIANGGGVYPEKEVLD--P 491 (648)
T ss_pred HHHHHHHhCcCCCcccCCCCeE--EEeec--------------CCC-Cc-------cccccccccccccCCCCCccC--H
Confidence 9999999999976 3322 11100 000 00 00001111111110 011123 2
Q ss_pred chh-hhhcCCCCH--HHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHH
Q 005783 496 NLW-SIVSSLGTP--KQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTL 572 (677)
Q Consensus 496 N~L-Al~~gll~~--eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~ 572 (677)
.+| ...+|++++ ++....++.|++ +|....|..-+.--+...+|.....+.+.+ .-..|-.||.+.+-.+.
T Consensus 492 SlL~L~~~G~~~~dDPri~~Tl~aIe~---~L~~~~~~~g~~~RY~~Dgyg~~~~~~~~~---~~~~G~~Wpi~T~~~~~ 565 (648)
T TIGR01535 492 GFLELVRLGVKSPDDPHILATLKEIDS---TIKVDTPKGPSWYRYTHDGYGEPAKTEAYD---GTGKGRLWPLLTGERGH 565 (648)
T ss_pred HHHHHHHcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEEecCCCCCCCcCCCCCcc---CCcCCceeehhhhHHHH
Confidence 344 347887654 688888888887 554321111000000112222222111111 12456779999666576
Q ss_pred HHHHhCChHHHHHHHHHHHhhCC-CCCCCccccCCC---------CCccCCCCCccchHhHHHHHHHHHHhc
Q 005783 573 ACIKMGRLGLAQKAVALAENRLP-LDHWPEYYDTRT---------GRFTGKQSRLFQTWTIAGFLTSKMLVE 634 (677)
Q Consensus 573 al~r~G~~~~A~~ll~~a~~~l~-~~~~pE~FDG~t---------g~p~G~~ac~~QAWSaA~~L~a~~lL~ 634 (677)
..+..|. .|..+++.++.+-. .+-+||.++..+ |+|.|. -.|-+||+|+||.+.+-+.
T Consensus 566 y~l~~~~--~a~~~l~~~~~~a~~~g~lpEQV~d~~~~~~~~~~~G~pt~S--a~PL~WsHA~yi~l~~s~~ 633 (648)
T TIGR01535 566 YELAAGK--DATPYLKAMEKFANEGGMIPEQVWDQTDLPSRGLFYGLPTDS--ASPLNWAHAEYVKLLRSNI 633 (648)
T ss_pred HHHHcCC--hHHHHHHHHHHhcCcCCCcCcccCCCCCCcccccccCCcCCc--cccchhhHHHHHHHHHHhh
Confidence 6666664 46788887655544 567999998776 666543 2599999999999888665
No 18
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=99.68 E-value=4.2e-15 Score=167.87 Aligned_cols=315 Identities=17% Similarity=0.201 Sum_probs=199.4
Q ss_pred CCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCC
Q 005783 225 LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (677)
Q Consensus 225 ~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge 304 (677)
..|...+.=|+-.++.|+|..|..+.||+.+..++.+- ..-|.|||-.++.
T Consensus 124 GRF~E~YyWDSYfi~~GLl~s~~~~~a~~mi~Nf~~~i----------~~yGfipNg~R~Y------------------- 174 (512)
T PF01204_consen 124 GRFREMYYWDSYFIILGLLASGMYETAKGMIENFLYLI----------DRYGFIPNGNRTY------------------- 174 (512)
T ss_dssp TTB-S-BHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH----------HHHSS--SBSBGG-------------------
T ss_pred CCcccchhHhHHHHHHHHHHcCCHHHHHHHHHHHHHHH----------HHhCcCCCCccHH-------------------
Confidence 58999999999999999999999999999998777332 2468999955422
Q ss_pred CCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHH-HhhcC----------CCccc--------C----
Q 005783 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMN-LCLAD----------GFDMF--------P---- 361 (677)
Q Consensus 305 ~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~-~~~~~----------gf~~y--------~---- 361 (677)
|-+==..|.+...+.+|++.|+|.+++++. .++|+.=.+ |+... ++..+ |
T Consensus 175 -----yl~RSQPPlla~mV~~~y~~t~d~~~l~~~--lp~L~ke~~fW~~~~r~~~~~~~~~~~~l~ry~~~~~~prpEs 247 (512)
T PF01204_consen 175 -----YLNRSQPPLLAQMVREYYEATKDKAFLREA--LPALEKEYEFWMDNNRDVRVTGLGKGYGLNRYGDPWNSPRPES 247 (512)
T ss_dssp -----GTT---S--HHHHHHHHHHHHHTCHHHHHH--HHHHHHHHHHHCCCEEETTEEEECTSEECCHHHHCHHCT-CCC
T ss_pred -----hccCCCCchHHHHHHHHHHhcCCHHHHHHH--HHHHHHHHHHHCCCCcceeecCCCccCCcccccCCCCCCcchH
Confidence 222336688999999999999999999872 233333333 34111 11111 0
Q ss_pred ---cccc---------------------cCC----Cccccccc----------CCCCCchhhHHHHHHHHHHHHHHHhhc
Q 005783 362 ---SLLV---------------------TDG----SCMIDRRM----------GIHGHPLEIQALFYTALRCSREMLTVS 403 (677)
Q Consensus 362 ---~Ll~---------------------~dG----~~WmD~r~----------gr~G~pVEIQALwY~ALr~aaeLa~~l 403 (677)
.... .+| +-|+.... ...-.||..||+.|.+.+.+|+|++.+
T Consensus 248 y~eD~~~a~~~~~~~~~~~~y~~i~saaESGwDfssRw~~~sg~d~~~l~~~~t~~iipVDLNa~L~~~e~~LA~~a~~l 327 (512)
T PF01204_consen 248 YREDVETAENFPSERDKEELYRDIASAAESGWDFSSRWFRDSGFDNSNLFTIRTTDIIPVDLNAILYRNEKDLAEFAELL 327 (512)
T ss_dssp CCHHHHHHHCHCHTSTCHHHHCHHHHHHHCCHHCTGGGBSSECCEE-TCHHCECCCEE-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhHHHHHhhcccchHHHHhhcccchhhhhhhccceeeecCCCchhhhhccceeeecCchHHHHHHHHHHHHHHHHHHc
Confidence 0000 011 12432200 012258999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeecccc
Q 005783 404 DGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQ 483 (677)
Q Consensus 404 g~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~ 483 (677)
| ..+.++.+.++++.+++.|++.||+++.+.+ |-+ .+.
T Consensus 328 G---~~~~a~~~~~~A~~~~~aI~~~lWdee~g~~--~Dy-------------------------------------d~~ 365 (512)
T PF01204_consen 328 G---DQEKAEEYRQRAEERKEAINQYLWDEEDGFY--YDY-------------------------------------DLR 365 (512)
T ss_dssp T----HHHHHHHHHHHHHHHHHHHHHTEETTTTEE----E-------------------------------------ETT
T ss_pred C---chhHHHHHHHHHHHHHHHHHHhCccCCCCeE--Eee-------------------------------------eCC
Confidence 7 4778888999999999999999999876643 110 011
Q ss_pred CCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCC-C
Q 005783 484 PAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG-S 562 (677)
Q Consensus 484 p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGg-V 562 (677)
.+. ..+..+..++++|++|+++++|++++++.+.. .+.....+.. |. .-....+.+..||+|+ +
T Consensus 366 ~~~-~~~~~~~a~f~PL~ag~a~~~qa~~~~~~~l~---~~~~~~~l~~--~~---------g~~ts~~~~~~qWD~Pn~ 430 (512)
T PF01204_consen 366 TGK-RSPVFSPANFLPLWAGIASPEQAERLVARALD---YLERSGLLTF--PG---------GIPTSLYDTGQQWDGPNV 430 (512)
T ss_dssp TTE-EGG--BGGGGHHHHTT-S-HHHHHHHHHHHHH---HCTTCCSSC---CS---------ECTTCTTTTTSTTSTTEE
T ss_pred CCC-CcccccHHHHHHHHHhhcCHhhhhhHHHHHHH---HHHhcCCccc--CC---------CCCCccccccccCCCCCc
Confidence 011 11144667889999999999999888877776 3322211111 10 0113345588999999 7
Q ss_pred chhhHHHHHHHHHHhCChHHHHHHHHHH----Hhh-CCCCCCCccccCCCC-Ccc--C--CCCCccchHhHHHHHHHHHH
Q 005783 563 WPTLLWQFTLACIKMGRLGLAQKAVALA----ENR-LPLDHWPEYYDTRTG-RFT--G--KQSRLFQTWTIAGFLTSKML 632 (677)
Q Consensus 563 WP~l~wl~a~al~r~G~~~~A~~ll~~a----~~~-l~~~~~pE~FDG~tg-~p~--G--~~ac~~QAWSaA~~L~a~~l 632 (677)
||-++|+++.||.++|..++|+++.... ... ...+.+.|.||...+ .+. | +..-..+.||.|.+|.++..
T Consensus 431 WaPlq~~~i~GL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~~~~gg~gGeY~~q~GFGWTNgv~l~~l~~ 510 (512)
T PF01204_consen 431 WAPLQWMAIEGLRRYGYRELARRLAQRWLRLNYKVFKRTGKMFEKYDVEDGGEPGGGGGEYPVQDGFGWTNGVYLDLLDK 510 (512)
T ss_dssp EHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCCCCCSSEBSEEETTTTSCEC-S-SSS---BS-HHHHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhcCchhccccceeccccCCCCCcccCCCCCccHHHHHHHHHHh
Confidence 9999999999999999999999888652 222 246889999998753 222 2 12335899999998877654
No 19
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.47 E-value=1.2e-12 Score=146.88 Aligned_cols=322 Identities=18% Similarity=0.161 Sum_probs=183.3
Q ss_pred CCcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCC--CcccchhhHHHHHHH-hccCChHHHHHHHHHHHhh
Q 005783 185 KREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNY--DQVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQL 261 (677)
Q Consensus 185 ~~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y--~~vwGRDt~Is~lgl-L~~G~pEiar~~L~~l~~l 261 (677)
++..+++.+.+..-++..+. ++. ..+|.+ ...|+-|+.++++.. ...++.+.+|+.|..+...
T Consensus 116 d~~ln~i~~~~~~T~~~n~~-------~~~-------~Dcp~RdER~~w~GD~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 181 (509)
T PF05592_consen 116 DPLLNRIWEMSRRTLRSNMQ-------DVF-------TDCPKRDERLGWTGDARVSALTAYYSFGDAALYRKWLRDFADS 181 (509)
T ss_dssp -HHHHHHHHHHHHHHHHTBS-------SSB--------SBTTT-T---BHHHHHHHHHHHHCCT--HHHHHHHHHHHHGG
T ss_pred cHHHHHHHHHHHHHHHhhCC-------CCc-------eECcchhhhcCCcchHHHHHHHHHHhCCcHHHHHHHHHHHHHh
Confidence 44455666666655555221 221 235666 488999999999986 5778999999999977744
Q ss_pred ccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcH
Q 005783 262 QSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDV 341 (677)
Q Consensus 262 Qs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~v 341 (677)
|. .+|.+|...+ ..+ ....+..|=+++||+.+++|++.|||.+++++.
T Consensus 182 q~----------~~G~~p~~~P-----------------~~~---~~~~~~~~w~l~~i~~~~~~y~~tGD~~~l~~~-- 229 (509)
T PF05592_consen 182 QR----------PDGLLPSVAP-----------------SYG---GGGFGIPDWSLAWIIIPWDYYLYTGDREFLEEY-- 229 (509)
T ss_dssp TT----------TSTT-SSBSS-----------------------SSGGGBHHHHHHHHHHHHHHHHHHT-HHHHHHH--
T ss_pred hc----------ccCCceEEec-----------------ccC---CCCCCCccHHHHHHHHHHHHHHHhCCHHHHHHH--
Confidence 43 4677776442 111 011224566799999999999999999999982
Q ss_pred HHHHHHHHHHhhcCCCcccCcccccCCCccccc---ccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 005783 342 QTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDR---RMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (677)
Q Consensus 342 q~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~---r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~r 418 (677)
.+.++..++++....-.....+....-.+|... .....+..+-.|+++|.||+.+++||..+|+ ++.++.++++
T Consensus 230 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~DW~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~lA~~lg~---~~~a~~y~~~ 306 (509)
T PF05592_consen 230 YPAMKRYLDYLERRVDDGLDGLPGWGFGDWLAPGNDGDGPTPGATITNALYYYALRAAAELAEALGK---DEDAAEYRAR 306 (509)
T ss_dssp HHHHHHHHHHHHTTB-TSSB-CCSB--S-SS----TT---SCCEEHHHHHHHHHHHHHHHHHHHCT----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCccCcccccchHHHHHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHH
Confidence 355666666664321110000111111256511 1222334455999999999999999999984 5668889999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchh
Q 005783 419 LSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLW 498 (677)
Q Consensus 419 a~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~L 498 (677)
+++||+.|+++||+++++. |-. .. --+|++
T Consensus 307 a~~lk~a~~~~~~d~~~g~---------------------------------------~~~----~s-------q~~~al 336 (509)
T PF05592_consen 307 AERLKAAINRHFWDPEKGG---------------------------------------YAD----GS-------QHANAL 336 (509)
T ss_dssp HHHHHHHHHHHCEETTTTE---------------------------------------ECT----TS-------HCHHHH
T ss_pred HHHHHHHHHHhccCcccCc---------------------------------------ccC----Cc-------hHHHHH
Confidence 9999999999999865431 110 00 125778
Q ss_pred hhhcCCCCHHHH-HHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHh
Q 005783 499 SIVSSLGTPKQN-ESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKM 577 (677)
Q Consensus 499 Al~~gll~~eqa-~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~ 577 (677)
|+.+|++++++. .++.+.+.+. +...+ ..+ -.|.+ -..++..+|.++
T Consensus 337 Al~~gl~p~~~~~~~~~~~l~~~----~~~~~------------~~~-------------~~g~~---g~~~~~~~L~~~ 384 (509)
T PF05592_consen 337 ALLFGLVPEEERAAAALKRLAKR----IAANG------------YHL-------------STGFI---GSPYLLEALFRA 384 (509)
T ss_dssp CHHCCHC-HHHHTCHCHCHCHHC----CHCCC------------HS---------------TCCC----CHHHHHHHHHC
T ss_pred HHHhchhhhhhhHHHHHHHHHHH----HHhcC------------CCc-------------Ccccc---cHHHHHHHHHHc
Confidence 999999987765 6666655541 11111 000 11211 224456778889
Q ss_pred CChHHHHHHHHHH-----HhhC--CCCCCCccccCCCC-CccCCCCCccchHhHHHH-HHHHHHhc-CCCcCc
Q 005783 578 GRLGLAQKAVALA-----ENRL--PLDHWPEYYDTRTG-RFTGKQSRLFQTWTIAGF-LTSKMLVE-NPEMAS 640 (677)
Q Consensus 578 G~~~~A~~ll~~a-----~~~l--~~~~~pE~FDG~tg-~p~G~~ac~~QAWSaA~~-L~a~~lL~-~p~~~~ 640 (677)
|+.+.|.+++... ...+ ....+.|.|++..+ .+..+. .-+|+++-. .+...++. .|..+.
T Consensus 385 g~~~~a~~~~~~~~~~~w~~ml~~g~tT~wE~w~~~~~~~~~~S~---~H~w~~~p~~~l~~~v~GI~p~~pG 454 (509)
T PF05592_consen 385 GRADGAYDLLTQRDYPSWGYMLDQGATTLWEYWDGDGGDPPNRSL---CHAWSAGPTYWLYRYVLGIRPTEPG 454 (509)
T ss_dssp CHHCCHHHHHHHHHHHHCHHHHCTT-SS--SS-STT-TCTT-S-S---SBGGG-THHHHHHHCTS-EEESSGG
T ss_pred CCHHHHHHHHHhccccchhHHHhCCCCEEEEecCccCCCCCCCCC---CCCcchhHHHHHHHHhhceEeCCCC
Confidence 9888888877431 1222 33479999997542 233344 678988753 34444554 555444
No 20
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=99.45 E-value=1.5e-13 Score=149.51 Aligned_cols=310 Identities=18% Similarity=0.215 Sum_probs=85.5
Q ss_pred HHHHHhccCChHHHHHHHHHHHhhcccccc----------ccccCCCCCCCCCcceeccccCCCcccccccCCCCCCC--
Q 005783 238 SALAFLLKGEGEIVRNFLLHTLQLQSWEKT----------VDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGES-- 305 (677)
Q Consensus 238 s~lglL~~G~pEiar~~L~~l~~lQs~e~~----------~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~-- 305 (677)
++++++.. =|++.+.+++.++..+..+.. ..... ..|.||+... + + .+ .|-....
T Consensus 23 ~s~al~~l-fP~Le~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~k-~~G~vphdlg--~-p-----~~---~P~~~~n~y 89 (365)
T PF04685_consen 23 ASFALLKL-FPELERSMQRDFADAILSEDNTERKILYDGKIAPRK-VRGAVPHDLG--S-P-----FD---DPWDRTNAY 89 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccc-cccccccccccccccccccccccccccccccccccc-cccccccccc--c-c-----cc---ccccccccc
Confidence 44454433 489999988877655555421 01111 2377777541 1 1 00 1111100
Q ss_pred -CCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh--hcHHHHHHHHHHHh-hcCCCcccCcccccCCCcccccccCCCCC
Q 005783 306 -AIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLC-LADGFDMFPSLLVTDGSCMIDRRMGIHGH 381 (677)
Q Consensus 306 -a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~~vq~al~~Il~~~-~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~ 381 (677)
.+....-.|..++||+.+++|+++|||.+||++ |.++++|++.+.+- .++|..+-+. .+| .+.|. ....|.
T Consensus 90 ~~~~~~~~~D~~~~fVL~vyr~~~~TGD~~fL~~~wp~v~~a~~~~~~~D~d~dGl~e~~g--~~D--~TyD~-~~~~G~ 164 (365)
T PF04685_consen 90 NYHDVYAWKDLNPKFVLQVYRDYKWTGDRDFLKEMWPAVKKAMDYLLSWDRDGDGLPENPG--HPD--QTYDD-WSMYGP 164 (365)
T ss_dssp ---------------------------------EHHHHHHHHHHHHHHSB--TTS-BEEET-------SSSTT--EEEEE
T ss_pred ccccccccccccccccccccccccccccchhhhhHHHHHHHHHHHHHhhCCCCCCCCCCCC--CCc--ccccc-CCeeCC
Confidence 012345799999999999999999999999998 77777777766632 2334332210 011 33444 225677
Q ss_pred chhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCC
Q 005783 382 PLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPE 461 (677)
Q Consensus 382 pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~ 461 (677)
..++++||+.||+++++||+.++ +++.++++++.+++.|+.|++.+|+.+ . |+...+ .. ..
T Consensus 165 say~~~L~laAL~A~~emA~~lg---d~~~a~~y~~~~~~~~~~~~~~LWnGe--y---y~~~~d---~~-----~~--- 225 (365)
T PF04685_consen 165 SAYCGGLWLAALRAAAEMAKILG---DPELAAKYRELAEKAKKAFNKKLWNGE--Y---YRQWYD---SK-----YQ--- 225 (365)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHSEETT--E---E--EE-----------TT---
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHhhCHh--h---eeeeec---cC-----CC---
Confidence 89999999999999999999997 478899999999999999999999864 1 220000 00 00
Q ss_pred CccccccccccCCCCeeeccccCCccCcccccccchhhh---hcCCCCHHHHHHHHHHHHHhhhhhc----cCCCceee-
Q 005783 462 QIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSI---VSSLGTPKQNESILNLIEAKWDDLV----GHMPLKIC- 533 (677)
Q Consensus 462 ~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl---~~gll~~eqa~~Vv~~i~~~w~~Ll----tp~pLr~L- 533 (677)
...+-+.+ + ..|..++- +-.|++++++++.++.|.+. -+. +++|+..+
T Consensus 226 -----------~~~~~~aD-----Q------l~Gqw~a~~~gl~~v~~~e~v~sAL~sI~~~--N~~~~~~~~~G~~n~~ 281 (365)
T PF04685_consen 226 -----------NGDGCMAD-----Q------LCGQWWARLLGLGDVLDEEKVKSALRSIYEY--NVKYFLGGEMGAVNGV 281 (365)
T ss_dssp -----------S-EES-TT------------SS--EEHHHHHHTT-S-HHHHHHHHHHHHHH--HEE-S-BTTTBGGGGS
T ss_pred -----------CCCeEEeC-----h------hhHHHHHHHcCCcCCCCHHHHHHHHHHHHHh--cCeEccCCCCcEEEee
Confidence 00001100 0 11322221 45679999999999999974 222 34444432
Q ss_pred cCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhhCC-----CCCCCccccCCCC
Q 005783 534 YPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLP-----LDHWPEYYDTRTG 608 (677)
Q Consensus 534 ~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~l~-----~~~~pE~FDG~tg 608 (677)
+| +-...+.+.|...|||=+...++..++..|..++|.+++++..++.. ...-||.++...
T Consensus 282 ~p-------------~g~~~~~~~q~~evW~G~~y~~Aa~mi~~G~~~e~~~~~~~~~~~~~~~~g~~f~~pE~~~~~~- 347 (365)
T PF04685_consen 282 WP-------------DGKPDTSSPQSNEVWTGVEYAVAAHMIQEGMVEEGLEIAKGIYDRYYGRKGNPFNTPEAINADG- 347 (365)
T ss_dssp -T------------------------------------------------------------------------------
T ss_pred ec-------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 22 11244556778889999999999999999999999999887544433 235678887654
Q ss_pred CccCCC-CCccchHh
Q 005783 609 RFTGKQ-SRLFQTWT 622 (677)
Q Consensus 609 ~p~G~~-ac~~QAWS 622 (677)
.+++.- .+..-.|+
T Consensus 348 ~~r~~~Y~R~ls~W~ 362 (365)
T PF04685_consen 348 NYRGSHYMRPLSIWS 362 (365)
T ss_dssp ---------------
T ss_pred ccccccccccccccc
Confidence 232221 33355555
No 21
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=99.43 E-value=4.1e-12 Score=149.99 Aligned_cols=220 Identities=13% Similarity=0.153 Sum_probs=132.8
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCC
Q 005783 383 LEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQ 462 (677)
Q Consensus 383 VEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ 462 (677)
|.-.+-.+-+-+.|++||..++.+++ +....+.+..|++++++.-|+++.++|.=+-..++ ...+......+..
T Consensus 558 vDl~sWMa~~a~~M~~IA~~L~~~d~---~~ef~~~~~~i~~~l~~~hWdeedgfYyD~~~~~~---~v~l~~~~~~~~~ 631 (801)
T PF03200_consen 558 VDLTSWMAFFALNMARIALELGKEDD---AYEFFEHFEYISDALNKLHWDEEDGFYYDVGLHPD---AVRLEWKEVLENG 631 (801)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCccc---HHHHHHHHHHHHHHHHHhcCCcccCceeeeccccc---cceeccccccccc
Confidence 66677778888899999999875222 11144566678888999999999886511110111 0000000000000
Q ss_pred -ccccccccccCCCCeeeccccCCccCccccccc--chhhhhcCCCCH--HHHHHHHHHHHHhhhhhccCCCceeecCCC
Q 005783 463 -IPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLG--NLWSIVSSLGTP--KQNESILNLIEAKWDDLVGHMPLKICYPAL 537 (677)
Q Consensus 463 -ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslG--N~LAl~~gll~~--eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l 537 (677)
.+.-+.+....+ |. ..+ +...| ++++++.+++++ ++.+++++.|... ++|++|+|||+|+.
T Consensus 632 ~~~~~~~r~~~~~---------~~-~~~-v~~~Gyvsl~Plll~ll~~ds~~L~~~L~~l~D~-~ef~s~yGirSLSk-- 697 (801)
T PF03200_consen 632 QFRRELVRVVRGE---------PQ-LQL-VCHFGYVSLFPLLLGLLPPDSERLERLLERLLDE-DEFWSPYGIRSLSK-- 697 (801)
T ss_pred ccchhheecccCC---------cc-ccc-eeeecccCCCchhhccCCCCHHHHHHHHHHhcCh-hhccCCCCCccccC--
Confidence 000000000000 00 000 11112 445678888876 5888999999843 48999999999976
Q ss_pred CCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCCh-----HHHHHHHHH--------HHhhC-CCCCCCccc
Q 005783 538 ESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRL-----GLAQKAVAL--------AENRL-PLDHWPEYY 603 (677)
Q Consensus 538 ~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~-----~~A~~ll~~--------a~~~l-~~~~~pE~F 603 (677)
.++-|. .+....+.+||+|+||.-+|++++.||.+||.. +.|.++... ..+.. ..+-+.|+|
T Consensus 698 ~~~~y~----~~~~e~d~~YWRGpIW~~~NyL~i~aL~~y~~~~g~~~~~a~~~y~~Lr~nli~nv~~~~~~tg~~~E~Y 773 (801)
T PF03200_consen 698 SDPFYG----PGENEHDPSYWRGPIWIPINYLLIEALRRYGYYYGPYQERAKEIYKELRKNLINNVYKEYKRTGYFWEQY 773 (801)
T ss_pred CCcccc----ccCCccCCCcccCccchhhHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccEEEeE
Confidence 444222 222223458999999999999999999999842 334333221 11222 356799999
Q ss_pred cCCCCCccCCCCCccch-HhHHHHHHH
Q 005783 604 DTRTGRFTGKQSRLFQT-WTIAGFLTS 629 (677)
Q Consensus 604 DG~tg~p~G~~ac~~QA-WSaA~~L~a 629 (677)
++.||++.|+. +|+ ||+..++++
T Consensus 774 ~~~tG~g~g~~---~FtGWtslv~~im 797 (801)
T PF03200_consen 774 NPETGRGQGAH---PFTGWTSLVVLIM 797 (801)
T ss_pred CCCCCcccCCC---CCCchHHHHHHHH
Confidence 99999999987 887 999876654
No 22
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=99.26 E-value=8e-10 Score=122.84 Aligned_cols=196 Identities=16% Similarity=0.183 Sum_probs=109.1
Q ss_pred HHHHHHHhHhhhc----cc-cceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHH---------------HH
Q 005783 195 AWRLLQEAVVTYC----ES-PIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVR---------------NF 254 (677)
Q Consensus 195 A~~lLr~~~~~~~----~~-p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar---------------~~ 254 (677)
+++.+.+++...+ .. +++++|++.. ..|.|..+|.||+++++.+++..|..+.++ ++
T Consensus 3 ~~~~~~rs~~~l~l~~~~~~~GaiiAsps~---s~pdY~y~W~RD~a~~~~al~~~g~~~~~~~~~~~l~~~~~~~~~~~ 79 (448)
T PF00723_consen 3 YLDAVYRSALTLKLLTQEPITGAIIASPST---SLPDYRYCWVRDAAYTAYALWALGYRDEARAFFYELEQSLVKLMRGY 79 (448)
T ss_dssp HHHHHHHTBTTTHTTBTTSSTT-B-S-SSB---SSSBTCSEEHHHHHHHHHHHHHHT-H--HHHHHTTT-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCCeEEeeccc---CCCCCceeecccHHHHHHHHHHhhhhHHHHHHHhhhhHhhhhhhhhh
Confidence 3455555555432 33 5677777543 356999999999999999998666443333 34
Q ss_pred HHHHHhhccccccccccCCCCCC-CCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCCh
Q 005783 255 LLHTLQLQSWEKTVDCYSPGQGL-MPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDY 333 (677)
Q Consensus 255 L~~l~~lQs~e~~~~~~~~~~G~-iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~ 333 (677)
|.....+|+.......+....|+ .|. +.+ .|. +..|..+.+. -..|.+-.+++++.+|.+. | .
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~--------~~~----~~~g~~~w~~-~Q~D~~gl~l~~l~~~~~~-g-~ 143 (448)
T PF00723_consen 80 LQPMYRQQGKVNPSGEFQSPEGLHEPG-YNV--------SGP----VRVGNPAWGR-PQNDGPGLRLLALWQYIDS-G-L 143 (448)
T ss_dssp HHHHHHHHTS-BTTB-TTTTGGGGTTE-EET--------TSE----BTTS-B-ES---BTHHHHHHHHHHHHHHHT-T-H
T ss_pred hhhhhhhcCccCCCccccCccccccce-ecC--------CCC----cccCchhccC-cCCCchHHHHHHHHHHHHc-C-C
Confidence 44455555542211111100010 111 100 010 0112111111 1579999999999999432 3 3
Q ss_pred hHHhh--hc--HHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchh--hHHHHHHHHHHHHHHHhhcCCCC
Q 005783 334 ALQER--VD--VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLE--IQALFYTALRCSREMLTVSDGSG 407 (677)
Q Consensus 334 ~fl~~--~~--vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVE--IQALwY~ALr~aaeLa~~lg~~~ 407 (677)
.+... +. |+..++.+.+....+.|++|+ .+.|..-. ..+.-+.||..++.+|...+
T Consensus 144 ~~~~~~~~~~~I~~~~~yi~~~w~~pd~dlWE---------------e~~g~~~f~~S~~~~~~AL~~a~~~a~~~g--- 205 (448)
T PF00723_consen 144 QIIYTYWEVSFIKNDLDYIERNWREPDFDLWE---------------ERNGIHFFTASSAMQWAALLRAANLAELFG--- 205 (448)
T ss_dssp HHHHTHHHHHTHHHHHHHHHHHTTSBEE-TTS---------------S-EEEEHH--HHHHHHHHHHHHHHHHHHTT---
T ss_pred CcccccchhHHHHHHHHHHHHHcCCcCCcccc---------------ccCCCCccchhHHHHHHHHHHHHHHHHHcC---
Confidence 33333 22 556666666655566777665 12334344 88999999999999999987
Q ss_pred ChHHHHHHHHHHHHHHHHHH
Q 005783 408 SNNLVRAINNRLSALSFHIR 427 (677)
Q Consensus 408 ~~~~a~~~~~ra~~Lk~~f~ 427 (677)
+...++.+.+.+.++++.+.
T Consensus 206 ~~~~~~~~~~~a~~i~~~l~ 225 (448)
T PF00723_consen 206 DPGDAERWRETADEIRERLE 225 (448)
T ss_dssp -HHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHhh
Confidence 46777778888888888883
No 23
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=99.26 E-value=2.7e-10 Score=133.00 Aligned_cols=280 Identities=23% Similarity=0.319 Sum_probs=190.9
Q ss_pred ccc-hhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCC-CC
Q 005783 230 VFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGES-AI 307 (677)
Q Consensus 230 vwG-RDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~-a~ 307 (677)
-|| ||..==.+.++.. +|+.+|.-++.++..|=.+ |-.|+-| +|+.+.. .+
T Consensus 611 A~GfRD~~Qd~l~f~~~-~p~~aR~qIl~~as~Qf~e----------Gd~~hWf----------------~p~t~ag~qi 663 (1056)
T COG3459 611 AFGFRDQLQDTLEFLLA-RPALARKQILDAASRQFVE----------GDVQHWF----------------LPDTYAGVQI 663 (1056)
T ss_pred eeccccccccchhhhhc-CHHHHHHHHHHHHhhcccC----------CCccccc----------------cccccccchh
Confidence 454 8888777887766 5999999998777555544 4445554 1222110 11
Q ss_pred CcccCCCcHHHHHHHHHHHHHHhCChhHHhh-------h--------------cHHHHHHHHHHHhhcCCCcccCccccc
Q 005783 308 GRVAPVDSGLWWIILLRAYGKITGDYALQER-------V--------------DVQTGIKLIMNLCLADGFDMFPSLLVT 366 (677)
Q Consensus 308 ~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~-------~--------------~vq~al~~Il~~~~~~gf~~y~~Ll~~ 366 (677)
+...-|-.+|.+.++..|.+.|||.++|++ + +++++++.++......+. |+.+
T Consensus 664 -r~~~sDdvvWl~~a~~~Yl~~TGD~aILdE~iPf~~~~~l~~~s~e~~TLyEH~~rAld~av~r~g~~gl---pli~-- 737 (1056)
T COG3459 664 -RTSISDDVVWLLKAIADYLKETGDAAILDEVIPFIDGPALPEFSKEQATLYEHCARALDLAVARLGPHGL---PLIL-- 737 (1056)
T ss_pred -hcccCCceeeeHHHHHHHHHhcCcHhhhhccccccCCCccccccccchhHHHHHHHHHHHHHHhcCCCCc---cccc--
Confidence 233458889999999999999999999987 2 233344444443323332 2222
Q ss_pred CCCcccccc--cC--CCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 005783 367 DGSCMIDRR--MG--IHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYR 442 (677)
Q Consensus 367 dG~~WmD~r--~g--r~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr 442 (677)
|.+|=|.= ++ .-|--+=+--+.+.+|+...+|++..+ +.+.+..+++-++++++...++-|+. ++||
T Consensus 738 -gGDWND~ln~vg~~g~geSv~lgW~l~~tlq~F~~lak~r~---d~~r~~~~~~~~ea~~~~~~~~~wDg-----~wy~ 808 (1056)
T COG3459 738 -GGDWNDGLNLVGNGGKGESVWLGWFLALTLQTFKELAKARG---DEARADTWAKHVEALREALETNGWDG-----EWYR 808 (1056)
T ss_pred -CCcccccccccccCCccceeehhhHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHHHHHhcCCCc-----ceEE
Confidence 23453331 22 223456667788999999999999886 46777888888889999999999983 2222
Q ss_pred ccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhh
Q 005783 443 YKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWD 522 (677)
Q Consensus 443 ~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~ 522 (677)
. .|.+ +|-++ | .|...-.++|.+++.+++++|..+++++++-|+.|++
T Consensus 809 r---~~~d-----------------------~g~~l-g--s~e~~E~qI~~i~qs~sVlSg~gd~~ra~kaMd~v~k--- 856 (1056)
T COG3459 809 R---GYGD-----------------------DGTPL-G--SPEDEECQIDSIPQSWSVLSGEGDKERAEKAMDSVMK--- 856 (1056)
T ss_pred e---cccc-----------------------CCCcc-c--CCCCcccceeeeccchhhhhCCCChHHHHHHHHHHHH---
Confidence 1 1111 11122 1 2333334688999999999999999999999999998
Q ss_pred hhccCCCceeecCCCC----CCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHH
Q 005783 523 DLVGHMPLKICYPALE----SEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVAL 589 (677)
Q Consensus 523 ~Lltp~pLr~L~P~l~----~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~ 589 (677)
.|+.|.+||...|++. +++|--+ +-|..=-||+.-.|-+--++.|++|.|+.++|.+++..
T Consensus 857 ~L~~pdgvrL~tppf~~~~~~~gyiK~------y~pgvREnGgQYtHa~~w~i~Alak~G~a~eAw~~f~~ 921 (1056)
T COG3459 857 YLVDPDGVRLFTPPFSYTKGDPGYIKR------YPPGVRENGGQYTHAATWVILALAKMGRADEAWELFDK 921 (1056)
T ss_pred hccCccccEecCCcccccCCCCCeeec------CCcccccccceeecccHHHHHHHHhhccHHHHHHHHHh
Confidence 9999999999999873 3333222 23333458998888866668999999999999999865
No 24
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.62 E-value=3.8e-06 Score=94.45 Aligned_cols=192 Identities=20% Similarity=0.288 Sum_probs=133.8
Q ss_pred CchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCC
Q 005783 381 HPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYP 460 (677)
Q Consensus 381 ~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p 460 (677)
.|++-|++.|.-....+.+....+ ..+.++.+.+++++-+.+|++++|.++.+.+.=|- +. .
T Consensus 352 ~p~dlna~~y~~e~~~~~~~~~~~---~~~~~e~~~~~A~~R~~aI~~ylW~~e~G~~~DYd--~k--~----------- 413 (558)
T COG1626 352 LPVDLNALLYKLEEIIANISAIKG---DKETAERYQRKAEARRCAINKYLWDDEAGQYNDYD--WK--L----------- 413 (558)
T ss_pred chhhhhhHHHHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHccccccceeehhh--hh--c-----------
Confidence 479999999999999999888775 46778889999999999999999998776541111 00 0
Q ss_pred CCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCC
Q 005783 461 EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESE 540 (677)
Q Consensus 461 ~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~ 540 (677)
..+ .- .++..++.+++.|+++++||+++++.+.. .|..|=||-+.-| .
T Consensus 414 -------~~~----~~--------------y~~a~~~~plw~G~a~~era~~~a~~~~~---~l~~pGGl~ast~--~-- 461 (558)
T COG1626 414 -------KKR----RA--------------YLSAAALWPLWVGLATPERAQRLADAALS---MLEQPGGLSASTP--R-- 461 (558)
T ss_pred -------ccc----cc--------------ccchhhhhhccCCCCCHHHHHHHHHHHHH---HhcCCCceecccc--c--
Confidence 000 00 12334567899999999999999999987 7777777766544 1
Q ss_pred CCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhh---C--CCCCCCccccCCCCC-ccCCC
Q 005783 541 DWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENR---L--PLDHWPEYYDTRTGR-FTGKQ 614 (677)
Q Consensus 541 ~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~---l--~~~~~pE~FDG~tg~-p~G~~ 614 (677)
.-+-|-|=|| |+=+-|+...||.+||....|.++....+.. + ..+.+=|-||=..+. +.|..
T Consensus 462 ----------s~~QWD~PNg--WaPlq~ia~~gL~ryG~~~la~~ia~rwL~~v~~~~d~~~~~VEKydv~~~~~~~g~~ 529 (558)
T COG1626 462 ----------SGQQWDYPNG--WAPLQWIATQGLKRYGYDILADDIARRWLTNVEQFYDYEGKLVEKYDVSRGTGPGGGG 529 (558)
T ss_pred ----------ccccccCCCC--CccHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccceeEeeecccccCCCCC
Confidence 1233555576 8888999999999999888888777542221 2 135677777744332 22211
Q ss_pred CCc----cchHhHHHHHHHHHHhc
Q 005783 615 SRL----FQTWTIAGFLTSKMLVE 634 (677)
Q Consensus 615 ac~----~QAWSaA~~L~a~~lL~ 634 (677)
++. .+.|+-+.++.++.++.
T Consensus 530 geyp~q~GFGWtNgv~l~lL~~~~ 553 (558)
T COG1626 530 GEYPLQDGFGWTNGVVLKLLDLYG 553 (558)
T ss_pred cccCCcccccchhHHHHHHHHhhC
Confidence 222 36999999888877664
No 25
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=98.57 E-value=6.5e-06 Score=94.81 Aligned_cols=226 Identities=18% Similarity=0.202 Sum_probs=133.8
Q ss_pred CcccccccCCCCCc------hhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 005783 369 SCMIDRRMGIHGHP------LEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYR 442 (677)
Q Consensus 369 ~~WmD~r~gr~G~p------VEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr 442 (677)
++|||- +||.-+| |+-=+..+-|-|.+-.+|..+|. .+.+.+..+... +.++.+.+.-|.++.+.| |-
T Consensus 584 ~SGlDD-yPRAs~Ps~~ElhvDl~~W~~lasrsl~~iae~lg~-~~~E~~~a~~e~--~~~e~L~~~HW~ee~~~y--~D 657 (849)
T KOG2161|consen 584 SSGLDD-YPRASHPSVLELHVDLRCWVGLASRSLNRIAEFLGE-TEAEYATAITEL--ECKENLVQNHWSEEDQAY--CD 657 (849)
T ss_pred cccccc-cccccCchHHHHhhhhHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhhHH--HHHHHHHHhccChhhCee--ee
Confidence 457765 7777776 56677888899999999998874 123443332222 357889999999998764 11
Q ss_pred ccccccchhhhcccCCCCCCccccccccccCCCC---eeeccccCCccCcc-cc-ccc--chhhhhcCC--CCHHHHHHH
Q 005783 443 YKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGG---YLIGNLQPAHMDFR-FF-TLG--NLWSIVSSL--GTPKQNESI 513 (677)
Q Consensus 443 ~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~gg---Yl~g~v~p~~~D~r-~d-slG--N~LAl~~gl--l~~eqa~~V 513 (677)
|+.++.+++- .-.++.|. .+.-.|+--.+..+ ++ .+| +++++...| ++.++-.++
T Consensus 658 -------------~g~h~~dv~~---~~~p~~g~~~r~~~r~v~~~~p~~e~v~~h~GYvSl~P~mlrLlp~~S~rL~~~ 721 (849)
T KOG2161|consen 658 -------------FGNHTEDVSI---TPEPSIGKQFRGLVRRVDWFVPNLELVDRHIGYVSLFPFMLRLLPATSPRLTKL 721 (849)
T ss_pred -------------ccCChhhccc---cccCCcccchhhhheeccccCCcceeeecccceeehhhhHHhhcCCCchHHHHH
Confidence 1112222100 00111111 11111110000001 12 333 333444454 455788999
Q ss_pred HHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHH-hC-----ChHHHHHHH
Q 005783 514 LNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIK-MG-----RLGLAQKAV 587 (677)
Q Consensus 514 v~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r-~G-----~~~~A~~ll 587 (677)
+++|... .+|.+|||||+|+- .++-|.-+- ...+..||+|+||--+|.++..||.+ |. ....|+++.
T Consensus 722 Ldli~D~-~~lwSpYGlrSLS~--~s~yym~~N----te~d~pYWRGpIW~N~NYLiLsaL~~~Y~~~~gp~~~nA~~iy 794 (849)
T KOG2161|consen 722 LDLISDE-NELWSPYGLRSLSR--SSPYYMKRN----TEHDPPYWRGPIWMNVNYLILSALRHFYLYVPGPYQSNAAKIY 794 (849)
T ss_pred HHHhcCc-ccccCcchhhhhhh--cCCcccccc----CCCCCcccccceeeehHHHHHHHHHHhcccCCCchHHHHHHHH
Confidence 9999864 68999999999974 443322221 11223899999999999999999988 53 234455444
Q ss_pred HH--------HHhhC-CCCCCCccccCCCCCccCCCCCccchHhHHH
Q 005783 588 AL--------AENRL-PLDHWPEYYDTRTGRFTGKQSRLFQTWTIAG 625 (677)
Q Consensus 588 ~~--------a~~~l-~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~ 625 (677)
+. ..... ..+-|-|+||+.+|++.|+. ..-.||+=.
T Consensus 795 eELRaNlv~Nv~k~~~~tG~~wE~Yd~~tG~G~ga~--~FtGWTaLV 839 (849)
T KOG2161|consen 795 EELRANLVGNVSKQWQQTGYFWENYDPRTGRGLGAR--HFTGWTALV 839 (849)
T ss_pred HHHHHHHHHHHHHHhhccceeeeecCCCCCCccccc--cccchHHHH
Confidence 22 12222 35678899999999988875 345698743
No 26
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=98.45 E-value=2.7e-06 Score=93.92 Aligned_cols=344 Identities=16% Similarity=0.169 Sum_probs=184.5
Q ss_pred ccccceeeeccCCCCCCCCCCCcccchhhHHHHHHH--hccCChHHHHHHHHHHHhhccccccccccC----CC--CCCC
Q 005783 207 CESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQLQSWEKTVDCYS----PG--QGLM 278 (677)
Q Consensus 207 ~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lgl--L~~G~pEiar~~L~~l~~lQs~e~~~~~~~----~~--~G~i 278 (677)
...+.-+|..+|- +..|-||+.-=+.-. |+..+++++ ..++-+...|..-...+.|. +. -|+-
T Consensus 29 ~~~~~tFViTGDI--------pAmWLRDS~~Q~~pYl~l~~~d~~l~-~li~G~I~rQa~~I~~dPYaNAF~~~~~s~~~ 99 (424)
T PF06824_consen 29 DEDPDTFVITGDI--------PAMWLRDSAAQLRPYLPLAKEDPSLA-RLIRGVINRQARYILIDPYANAFNPPPESGIP 99 (424)
T ss_dssp TSTSEEEE-SBSS--------SSEEHHHHHHHCGGGGGGGCC-HHHH-HHHHHHHHHHHHHHHH-TT-SEEESS-----T
T ss_pred CCCCCeEEEecCc--------hhhhccccHhHHHHHHHHhcCCHHHH-HHHHHHHHHHHHHHhcchhhcccCCccccccc
Confidence 3455667776543 279999998666553 455556544 46666777888766666665 11 1111
Q ss_pred CCcceeccccCCCcccccccCCCC-CCCCCCc-ccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhcC-
Q 005783 279 PASFKVRNVPLESNKFEEVLDPDF-GESAIGR-VAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLAD- 355 (677)
Q Consensus 279 P~sfki~h~e~~~~~~e~~l~pd~-Ge~a~~~-ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~~- 355 (677)
|+.-. .+ . .+...+.+ +..-+.+ | .+|+--.||.+.+.|++.|||.+|+.+. ..+|++.|++-+...
T Consensus 100 ~~~~~-~~-~------~D~~~~~~~~~~v~ErKy-ElDSL~~~l~La~~y~~~Tgd~~~f~~~-~~~A~~~il~~~~~eq 169 (424)
T PF06824_consen 100 PNGNG-HW-Q------SDTTEMPYDPPWVWERKY-ELDSLCYFLQLAYQYWKATGDTSFFDED-WLRAVRLILDTWRTEQ 169 (424)
T ss_dssp SS-TS-GC-C------GSBS------TTEEE-----HHHHHHHHHHHHHHHHHH--GTTSSHH-HHHHHHHHHHHHHHTT
T ss_pred ccccC-CC-C------CCccCCCcCCCceeeecc-hhhhhhHHHHHHHHHHHhhCChhhhhHH-HHHHHHHHHHHHHHHH
Confidence 21100 00 0 01111111 0001112 4 7999999999999999999999999875 789999998755311
Q ss_pred C--Cc--------cc--C--------ccc--------ccCCCcccccc----cCCCCCchhhHHHHHHHHHHHHHHHhhc
Q 005783 356 G--FD--------MF--P--------SLL--------VTDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVS 403 (677)
Q Consensus 356 g--f~--------~y--~--------~Ll--------~~dG~~WmD~r----~gr~G~pVEIQALwY~ALr~aaeLa~~l 403 (677)
. |+ .| . +|. ...|..|--=| --..|+.|-.|+++-.+|+.+++|+..+
T Consensus 170 ~~t~~~~~~~~~s~Y~F~R~~~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~y~yliPsNm~a~v~L~~laei~~~~ 249 (424)
T PF06824_consen 170 RPTYDEDHEGLPSPYRFQRPTCRPTDTLPNDGRGNPVAYTGLIWSGFRPSDDACIYPYLIPSNMFAVVALEYLAEILRAL 249 (424)
T ss_dssp G------SSSCS-S---BESBSSGGGS-HHHHT-S----SSS-B-SB-TTSSB-SSSEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhccccccCCCcceeeccCCCCCccccCCCcCCcCCCCCceecCcCCCCcchhcCcCChHHHHHHHHHHHHHHHHHHh
Confidence 1 11 11 0 111 01111221000 0146788999999999999999999987
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeecccc
Q 005783 404 DGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQ 483 (677)
Q Consensus 404 g~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~ 483 (677)
...+..++++++++.++.+++.|.+|.=++..+.-.+|+|..+.|+.. ++
T Consensus 250 ~~~~~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYEVDG~G~~--------------------------~~---- 299 (424)
T PF06824_consen 250 GWDDSAELAERARALADEIRAGIEKHGIVEHPKFGKIYAYEVDGFGNH--------------------------LL---- 299 (424)
T ss_dssp T-THHHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SEE-SSS-E--------------------------E-----
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEEecCCCCc--------------------------cc----
Confidence 531113688888888888999999888776555556667666655442 11
Q ss_pred CCccCcccc-cccchhhh-hcCCC--CHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCcccc
Q 005783 484 PAHMDFRFF-TLGNLWSI-VSSLG--TPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHN 559 (677)
Q Consensus 484 p~~~D~r~d-slGN~LAl-~~gll--~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHN 559 (677)
|| | .++++|++ ..|-+ +++--+...+.|.+ |. +...++.|....--.+=|=
T Consensus 300 ---mD---DANvPSLLSlPylGf~~~~DpvYqnTR~~iLS---------------~~----~NPyy~~G~~~~GiGsPHt 354 (424)
T PF06824_consen 300 ---MD---DANVPSLLSLPYLGFCSKDDPVYQNTRRFILS---------------PE----GNPYYFSGKAASGIGSPHT 354 (424)
T ss_dssp ---------SSSS-STTHHHHTSS-TT-HHHHHHHHHHTS---------------TT-----STTEEEESSEEEE--TTT
T ss_pred ---cC---CCCCchHhhhhhcCCCCCCcHHHHHHHHHHhC---------------CC----CCCccccCCCcCCCCCCCC
Confidence 11 1 24566766 35654 33444555555544 31 0111222222222234477
Q ss_pred CCCchhhHHHHHHHHHHhCChHHHHHHHHHH-HhhCCCCCCCccccCCCCCccCCCCCccchHhHHHHHH
Q 005783 560 GGSWPTLLWQFTLACIKMGRLGLAQKAVALA-ENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLT 628 (677)
Q Consensus 560 GgVWP~l~wl~a~al~r~G~~~~A~~ll~~a-~~~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~ 628 (677)
|.-++|-.+++..++-- ...++.++.|+.. ......|-.-|=||.+++.-- .+..+||+-+.|--
T Consensus 355 ~~~~iWPmsl~~~~lTs-~d~~Ei~~~L~~L~~t~~gtGlmHES~d~~~~~~~---TR~WFaWaNslF~e 420 (424)
T PF06824_consen 355 PPGYIWPMSLAMQGLTS-DDDEEIRECLRMLKRTTAGTGLMHESFDVDDPSKF---TRPWFAWANSLFGE 420 (424)
T ss_dssp -TTEEEHHHHHHHHHT--S-HHHHHHHHHHHHHTSTTSSS--SEEETTEEEEE---E-S-BHHHHHHHHH
T ss_pred CCCCccHHHHHHHHhcC-CCHHHHHHHHHHHHhccCCCCceeccccCCCCccc---CcHHHHHHHHHHHH
Confidence 77777777888887643 3556666666653 334457788899998876322 23489998887643
No 27
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.13 E-value=9.2e-05 Score=84.85 Aligned_cols=335 Identities=13% Similarity=0.113 Sum_probs=198.5
Q ss_pred ceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCC
Q 005783 211 IGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLE 290 (677)
Q Consensus 211 ~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~ 290 (677)
.-.+..+-|-......|..+.+=|+...+.|+|..+..+.||+.+..+.. .. ...|.|||..++.-
T Consensus 167 ~sli~v~~PfiVPGgRF~E~YyWDsywii~GLl~S~m~~takGmieNf~~---lV-------~~yG~ipNg~R~YY---- 232 (600)
T KOG0602|consen 167 YSLIPVPNPFIVPGGRFRELYYWDSYWIIKGLLASQMFDTAKGMIENFIS---LV-------DTYGFIPNGGRVYY---- 232 (600)
T ss_pred CccccCCCceeccCCceeeeecccHHHHHHhHHhhcccHHHHHHHHHHHH---HH-------HhcCcccCCCeeee----
Confidence 34444433322334688999999999999999988999999999976652 22 24789999654221
Q ss_pred CcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh--hcHHHHHH-HHHHHhh---cCC--CcccC-
Q 005783 291 SNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIK-LIMNLCL---ADG--FDMFP- 361 (677)
Q Consensus 291 ~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~~vq~al~-~Il~~~~---~~g--f~~y~- 361 (677)
=+=-..+.+..-+.+|++.|+|.+|+++ +.++.=++ |.-+-+. .++ +.-|.
T Consensus 233 --------------------l~RSQPPllt~Mv~~~y~~t~~~~~~~~~l~tl~kEy~fw~~~~~~~~~~~~~~l~~y~~ 292 (600)
T KOG0602|consen 233 --------------------LNRSQPPLLTGMVYEYYEATNDEQFLKRALPTLIKEYEFWTNNRTEDVKDEGKVLSRYRV 292 (600)
T ss_pred --------------------eccCCCchhhhhHHHhhhccCcHHHHHHHHHHHhhheecccCCCccccccCCceeEEEec
Confidence 1112446666788999999999999986 22222222 1100000 111 11110
Q ss_pred ---------------cc-----------cccC-----CCc------ccccccCCCC------CchhhHHHHHHHHHHHHH
Q 005783 362 ---------------SL-----------LVTD-----GSC------MIDRRMGIHG------HPLEIQALFYTALRCSRE 398 (677)
Q Consensus 362 ---------------~L-----------l~~d-----G~~------WmD~r~gr~G------~pVEIQALwY~ALr~aae 398 (677)
.. ++.+ .+. |+-.+.-..+ .||-.|+|.++.++.++.
T Consensus 293 ~~~~prPEsy~~d~e~~e~~~t~~~~~~~~~~l~~~aesg~DfSsrw~~~~~t~~~~~t~~~vpvDLN~~~~~~~~i~~y 372 (600)
T KOG0602|consen 293 MGSGPRPESYREDFETAEHLKTEKEKQQLYQDLAAAAESGWDFSSRWFAVNGTLSSIGTTDLVPVDLNLLYKWNADIMKY 372 (600)
T ss_pred cCCCCCCcchHHHHHHHhcccchHHHHHHHHHHhhcCcccchhHHHhhccCCcccccccccccccchHHHHHhhHHHHhh
Confidence 00 0011 111 4322210011 589999999999999999
Q ss_pred HHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCee
Q 005783 399 MLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYL 478 (677)
Q Consensus 399 La~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl 478 (677)
+....| +.+-+...+++.++++..|++.+|+++.+.. |-|.
T Consensus 373 ~~~~~G---d~~~s~~~~~k~~~r~~~i~~vlWde~~g~w--~DYd---------------------------------- 413 (600)
T KOG0602|consen 373 FYVVDG---DPKDSAQFEKKSEQRRAAIQEVLWDEEDGAW--FDYD---------------------------------- 413 (600)
T ss_pred hcccCC---ChhHHHHHHHHHHHHHHHHHHhccCCCCCcc--eecc----------------------------------
Confidence 988876 3566777888999999999999999865421 1111
Q ss_pred eccccCCccCcccccccchhhhhcCCCCHH----HHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCC
Q 005783 479 IGNLQPAHMDFRFFTLGNLWSIVSSLGTPK----QNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTP 554 (677)
Q Consensus 479 ~g~v~p~~~D~r~dslGN~LAl~~gll~~e----qa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP 554 (677)
+.+... ..-+...|+.+++.+..+++ -+..|++.++.. .++++ |. -.+.+.+ .--+-
T Consensus 414 ---~~~~~~-~~~~~~sn~~Pl~~~~~~~~~~~~~~~~v~~~le~~--g~~~~-------p~-----giP~Sl~-~s~eQ 474 (600)
T KOG0602|consen 414 ---LELKKH-NTYFYASNFAPLWAGCYPAPDDDKSVDKVLDYLEKS--GALTF-------PG-----GIPTSLS-NSGEQ 474 (600)
T ss_pred ---cccccc-CCCcCchhhhhhhccCCCcccccchHHHHHHHHHHc--CCcCC-------CC-----CCcccCC-Cchhh
Confidence 111111 11334567889999988843 356667776653 33321 11 0111111 11223
Q ss_pred CccccCCCchhhHHHHHHHHHHhC---ChHHHHHHHHH-----HHhhCCCCCCCccccCCC--CCccCCC---CCccchH
Q 005783 555 WSYHNGGSWPTLLWQFTLACIKMG---RLGLAQKAVAL-----AENRLPLDHWPEYYDTRT--GRFTGKQ---SRLFQTW 621 (677)
Q Consensus 555 ~sYHNGgVWP~l~wl~a~al~r~G---~~~~A~~ll~~-----a~~~l~~~~~pE~FDG~t--g~p~G~~---ac~~QAW 621 (677)
|-|=| +||=...+++.++.++| ..+.|.++... .......+..+|-||-.. +.+.|.. --..++|
T Consensus 475 WD~Pn--~WaP~q~m~~~gl~~~~~~~~~~~A~kla~~wl~~~~~~~~~~g~~~EKY~vt~~~~~~G~ggEY~~QeGFGW 552 (600)
T KOG0602|consen 475 WDFPN--GWAPNQHMAIEGLRRAGNQELQEVALKLAQRWLETNFAVFVDSGGMFEKYDVTRDPGPHGGGGEYEVQEGFGW 552 (600)
T ss_pred ccCCC--CCCcceehhhhhhhhcCCHHHHHHHHHHHHHHHHHhhhhhcccCceeEeeccccCCCCCCCCCccccccCCCc
Confidence 44445 48888999999999999 55666666532 222334678999998543 2222211 1248999
Q ss_pred hHHHHHHHHHHhcCCCcC
Q 005783 622 TIAGFLTSKMLVENPEMA 639 (677)
Q Consensus 622 SaA~~L~a~~lL~~p~~~ 639 (677)
+.|.+|....-..+....
T Consensus 553 ~Ng~il~~L~~~g~~~~~ 570 (600)
T KOG0602|consen 553 TNGVILDLLKKYGSDLRR 570 (600)
T ss_pred cchhHHHHHHHcCCcccc
Confidence 999998877665544433
No 28
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=98.05 E-value=0.00029 Score=79.88 Aligned_cols=220 Identities=20% Similarity=0.202 Sum_probs=126.2
Q ss_pred CCcHHHHHHHHHHHHHHhCChhHHhh--hcHHHHHHHHHHHh-hcCCCcccCcccccCCCcccccccCCCCCchhhHHHH
Q 005783 313 VDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLC-LADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALF 389 (677)
Q Consensus 313 VDAtLWfIial~~Y~~~TGD~~fl~~--~~vq~al~~Il~~~-~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALw 389 (677)
.|-.+=||.+++.+++.|+|.+||++ +.+.++|+|+..+- ..||...-.+ -.|.. -|. .-..|+-.+.-+||
T Consensus 441 kDlgp~fVLlvYrdf~~T~D~eFL~e~y~~iv~~iD~~~~~d~d~DgiP~~~g--~~d~~--fDa-~~i~G~ssy~~sl~ 515 (721)
T COG4354 441 KDLGPDFVLLVYRDFKFTNDREFLKEVYPVIVEAIDWLKRFDQDNDGIPENSG--AMDNT--FDA-TRIQGHSSYCGSLF 515 (721)
T ss_pred hhcCCcEEeeehhhhhhcccHHHHHHHHHHHHHHHHHHHhhcccCCCCCcccC--Ccccc--ccc-ceeechhhhhhHHH
Confidence 34455588999999999999999998 55566666654322 2344332211 01110 011 12467889999999
Q ss_pred HHHHHHHHHHHhhcCCC--------CChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCC
Q 005783 390 YTALRCSREMLTVSDGS--------GSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPE 461 (677)
Q Consensus 390 Y~ALr~aaeLa~~lg~~--------~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~ 461 (677)
-.||-++.+|++.++.. ..+.+...+...++..++.|++++|+-
T Consensus 516 iaal~A~l~is~~l~~~~~~~a~~e~~~~~~~~y~~~L~~~~e~~~~~LwNG---------------------------- 567 (721)
T COG4354 516 IAALIAALEISKYLLDNAQLEALNEASKNYVDFYNTWLKEAREAFNKYLWNG---------------------------- 567 (721)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCc----------------------------
Confidence 99999999999877531 001233344455555666666666652
Q ss_pred CccccccccccCCCCeeecc--ccCC-ccCcccccccchhhhhc---CCCCHHHHHHHHHHHHHhhhhhccCCCceeecC
Q 005783 462 QIPSWLMDWIPEEGGYLIGN--LQPA-HMDFRFFTLGNLWSIVS---SLGTPKQNESILNLIEAKWDDLVGHMPLKICYP 535 (677)
Q Consensus 462 ~ip~~l~d~i~~~ggYl~g~--v~p~-~~D~r~dslGN~LAl~~---gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P 535 (677)
-|..-. ++-. -+..+ ..|.+.+-+. .+++.++++++++.|-. |--..+-. |-|
T Consensus 568 --------------kYy~lws~~~~~s~lAsQ--L~Gqfy~~LLgLpdivdhd~~ksal~sIy~----lnf~~~~~-~~~ 626 (721)
T COG4354 568 --------------KYYILWSNSGNDSVLASQ--LCGQFYATLLGLPDIVDHDKIKSALESIYD----LNFNASEY-CAA 626 (721)
T ss_pred --------------eeEecccccCchhhhHHH--HHhHHHHHHcCCCcccchHHHHHHHHHHHh----hccccccc-ccc
Confidence 122111 0000 00000 1233333333 46899999999999874 22111000 111
Q ss_pred CCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhh
Q 005783 536 ALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENR 593 (677)
Q Consensus 536 ~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~ 593 (677)
-.. +-.+.+ .+|.+-|-=++||=++-.+|+-+.+.|..+++-++.+..-++
T Consensus 627 n~v------~~dgsp-~n~~svq~~s~W~gi~F~laa~m~~~Gm~de~~~~~e~~w~~ 677 (721)
T COG4354 627 NGV------RPDGSP-VNPLSVQPLSVWPGINFALAAHMIQMGMKDEGFELAENVWNQ 677 (721)
T ss_pred Ccc------CCCCCc-CCcccccccccccchHHHHHHHHHHhcchhhhhHHHHHHHHH
Confidence 100 011233 356788899999999888888888999888776666543333
No 29
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=96.71 E-value=0.13 Score=56.19 Aligned_cols=326 Identities=16% Similarity=0.154 Sum_probs=172.4
Q ss_pred cccchhhHHHHHHH--hccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCC
Q 005783 229 QVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESA 306 (677)
Q Consensus 229 ~vwGRDt~Is~lgl--L~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a 306 (677)
..|-||+.-=+.-. ++.-+. ..|..+.-+.+.|..-...+.|. +.+.+....-.| ..+. ....|--.|
T Consensus 60 AmWLRDStaQvrPYL~lAkeD~-~l~~li~GlvkrQ~~~i~~DPYA--NAFn~~~n~~Gh-q~D~----T~m~~~vwE-- 129 (434)
T COG3538 60 AMWLRDSTAQVRPYLPLAKEDE-ELRRLIAGLVKRQARYILLDPYA--NAFNETANGAGH-QTDH----TEMNPWVWE-- 129 (434)
T ss_pred HHHHhcchhhhccceeecccCH-HHHHHHHHHHHHHHHHhhcChhh--hhcccccccCCc-ccCc----ccccchhhe--
Confidence 78999998766654 344444 45556667888888766555555 222222211112 1000 000011111
Q ss_pred CCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhh-cCCCc---cc----C------ccc--------
Q 005783 307 IGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL-ADGFD---MF----P------SLL-------- 364 (677)
Q Consensus 307 ~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~-~~gf~---~y----~------~Ll-------- 364 (677)
+--.+|+--..|.+.+.|++.|||.+-..+ ...++++.|++... .+.+. -| + +|.
T Consensus 130 --RKYEiDSLCYPiqLAYl~wk~Tg~t~~Fde-~f~~a~~~il~~~~~eQ~h~~~spY~F~R~t~r~~dTL~~~G~G~~~ 206 (434)
T COG3538 130 --RKYEIDSLCYPIQLAYLYWKATGDTSQFDE-DFRQAVETILRVWKVEQDHETDSPYRFERDTDRKSDTLGRAGKGAPT 206 (434)
T ss_pred --eeeeccchhhHHHHHHHHHHhcCCccccCH-HHHHHHHHHHHHHhHhhccCCCCCeeeeccccccchhhhhCCCCCCc
Confidence 222799999999999999999999876654 35688999887543 11111 11 0 111
Q ss_pred ccCCCcccccc-c---CCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 005783 365 VTDGSCMIDRR-M---GIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEI 440 (677)
Q Consensus 365 ~~dG~~WmD~r-~---gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~ 440 (677)
.+.|-+|--=| - =..||.|=.|...---|..+.+|+..+.. +++++.+....+.++++.|.++=-++.-+.-.|
T Consensus 207 a~tGM~wSgFRPSDDAC~YgYliPsNmFaVVvl~y~~ei~~~~~~--~~~~a~~a~~L~~eIq~Gi~~~g~~~~~~~~~i 284 (434)
T COG3538 207 APTGMTWSGFRPSDDACEYGYLIPSNMFAVVVLSYLQEILEALPH--DAEIARQAKELANEIQQGIEQFGKMDHPKGGEI 284 (434)
T ss_pred CcccceecCcCCCccchhcccccccchhhhhhHHHHHHHHHHccc--cHHHHHHHHHHHHHHHHHHHHhceecCCCCCee
Confidence 12333342111 0 14678888999999999999999987643 677777665555556666654433333222233
Q ss_pred hhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhh-hcCCC--CHHHHHHHHHHH
Q 005783 441 YRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSI-VSSLG--TPKQNESILNLI 517 (677)
Q Consensus 441 yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl-~~gll--~~eqa~~Vv~~i 517 (677)
|+|..+.|+.. ..|| --.++++||+ ..|-. +.+-=...-+.|
T Consensus 285 yAyEVDG~Gn~---------------------------------l~MD--DaNvPSLLa~PYLG~c~~dDpvY~~TRk~i 329 (434)
T COG3538 285 YAYEVDGLGNQ---------------------------------LFMD--DANVPSLLAAPYLGFCEKDDPVYQNTRKTI 329 (434)
T ss_pred EEEEecCCCce---------------------------------eecc--CCCchhhhhhhhhccccCCCHHHHHHHHHH
Confidence 33333332221 1233 1144666665 34443 233333444555
Q ss_pred HHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCcccc--CCCchhhHHHHHHHHHHhCChHHHHHHHHHH-HhhC
Q 005783 518 EAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHN--GGSWPTLLWQFTLACIKMGRLGLAQKAVALA-ENRL 594 (677)
Q Consensus 518 ~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHN--GgVWP~l~wl~a~al~r~G~~~~A~~ll~~a-~~~l 594 (677)
.+. + . | . ++.|...---.|=|- +-|||. ++.+.|+- ..+.++-+.+++.. .-.-
T Consensus 330 LS~--e--N--------P----Y----y~eG~~a~GiGSpHTp~~yvWpi--aLaiqgLT-a~D~~ek~~iL~~L~~tda 386 (434)
T COG3538 330 LSS--E--N--------P----Y----YYEGKYASGIGSPHTPDHYVWPI--ALAIQGLT-ANDDSEKKEILDMLKATDA 386 (434)
T ss_pred Hhc--C--C--------C----c----eecceeeccCCCCCCCCcccchH--HHHHhhcc-cCChHHHHHHHHHHHhccC
Confidence 542 1 1 1 1 112211111122232 346664 44455553 23455556666542 2233
Q ss_pred CCCCCCccccCCCCCccCCCCCccchHhHHHHHHHH
Q 005783 595 PLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSK 630 (677)
Q Consensus 595 ~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~ 630 (677)
..+-.-|=||-+.++-- .|..++|+-.+|--+.
T Consensus 387 GTg~MHE~f~vd~P~~f---TR~WFsWAN~mF~Eli 419 (434)
T COG3538 387 GTGLMHEGFDVDDPEQF---TREWFSWANMMFCELI 419 (434)
T ss_pred CccceecccCCCCHHHh---hhHHHHHHHHHHHHHH
Confidence 45667799987665433 4459999888765433
No 30
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=95.40 E-value=0.23 Score=58.44 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=66.7
Q ss_pred HHHhCChhHHhh--hcHHHHHHHHHHHh-hcCCCcccCcccccCC--CcccccccCCCCCchhhHHHHHHHHHHHHHHHh
Q 005783 327 GKITGDYALQER--VDVQTGIKLIMNLC-LADGFDMFPSLLVTDG--SCMIDRRMGIHGHPLEIQALFYTALRCSREMLT 401 (677)
Q Consensus 327 ~~~TGD~~fl~~--~~vq~al~~Il~~~-~~~gf~~y~~Ll~~dG--~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~ 401 (677)
+..|||+.|++. |.|..+|+...+|= ++||..+-.+ .+|- +.|. .+|--.|--+||..||..+.+||.
T Consensus 570 ~~~tgd~~flk~~wpsv~~ime~l~~fDKD~DGmIEN~G--fpDQTYD~W~-----~tGvSAYCGgLWlAALqa~~amA~ 642 (879)
T KOG2119|consen 570 YVATGDEKFLKAVWPSVYAIMEYLEQFDKDNDGMIENEG--FPDQTYDAWS-----MTGVSAYCGGLWLAALQAASAMAR 642 (879)
T ss_pred eEEeccHHHHHHHHHHHHHHHHHHHhhcccCCcccccCC--CCCccccceE-----EecchhhhhHHHHHHHHHHHHHHH
Confidence 446899999998 66666665555543 2344433210 0111 2341 244557888999999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhhhhh
Q 005783 402 VSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433 (677)
Q Consensus 402 ~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d 433 (677)
..| +++......++++.-|..+.+.+|+-
T Consensus 643 ~~g---~~~~~~~f~~klekak~~ye~kLWNG 671 (879)
T KOG2119|consen 643 QIG---DPNTQDYFNNKLEKAKDVYEKKLWNG 671 (879)
T ss_pred HhC---ChhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 997 46777777778887888888889974
No 31
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=90.16 E-value=17 Score=39.34 Aligned_cols=99 Identities=10% Similarity=-0.021 Sum_probs=59.1
Q ss_pred cHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHH
Q 005783 315 SGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALR 394 (677)
Q Consensus 315 AtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr 394 (677)
..-=.|.++..+++.+||.++++. +.++++.+.+.+..+.+..|--.+-.+| +....++-++.||..-.||.
T Consensus 54 ~~ar~i~~~a~a~~~~~~~~~l~~--A~~~~~fl~~~~~d~~~Gg~~~~~~~~g------~~~~~~~~l~~~a~~l~ala 125 (384)
T cd00249 54 LQARQVYCFAVAYLLGWRPEWLEA--AEHGLEYLDRHGRDPDHGGWYFALDQDG------RPVDATKDLYSHAFALLAAA 125 (384)
T ss_pred EecHHHHHHHHHHHhcCChhHHHH--HHHHHHHHHHhCcCCCCCCEEEEEcCCC------CCcccccchHHHHHHHHHHH
Confidence 334456788899999999888764 4577888777664432222211111133 11223445999998888877
Q ss_pred HHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhh
Q 005783 395 CSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYW 431 (677)
Q Consensus 395 ~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW 431 (677)
.+.+. .+ +.+..+ .++++-+.+.++||
T Consensus 126 ~~~~a---t~---d~~~l~----~A~~~~~~l~~~~~ 152 (384)
T cd00249 126 QAAKV---GG---DPEARA----LAEETIDLLERRFW 152 (384)
T ss_pred HHHHh---cC---CHHHHH----HHHHHHHHHHHHhc
Confidence 66554 33 233333 44456677788888
No 32
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=84.22 E-value=4.4 Score=45.09 Aligned_cols=155 Identities=15% Similarity=0.047 Sum_probs=70.2
Q ss_pred CCCCcccchhh-HHHHHHHhccCChHHHHHHHHHHH-hh-ccccccccccCCCCC-CCCCcceeccccCCCcccccccCC
Q 005783 225 LNYDQVFIRDF-VPSALAFLLKGEGEIVRNFLLHTL-QL-QSWEKTVDCYSPGQG-LMPASFKVRNVPLESNKFEEVLDP 300 (677)
Q Consensus 225 ~~Y~~vwGRDt-~Is~lglL~~G~pEiar~~L~~l~-~l-Qs~e~~~~~~~~~~G-~iP~sfki~h~e~~~~~~e~~l~p 300 (677)
..|..-.==|+ +...|.++.. .||+||+.|.+=. .| |.++. +....-+| +.|++- ..+|+|.-
T Consensus 28 e~Y~Gh~FWDtE~~~~P~~~~~-~Pe~Ar~lL~YR~~~L~~Ar~~--A~~~g~~GA~yPWeS--------~~~G~E~t-- 94 (370)
T PF03632_consen 28 EGYKGHVFWDTEIFMLPFFLLT-HPEAARSLLNYRYRTLPQAREN--AREYGYKGAMYPWES--------ARTGEECT-- 94 (370)
T ss_dssp STTTTSB-THHHHCHHHHHHHS--HHHHHHHHHHHHTTHHHHHHH--HHCTT--S----SSB--------SS-SSB----
T ss_pred CCcCCeeeecchHHhcchHhhc-CHHHHHHHHHHHHHHHHHHHHH--HHHcCCCcceeeccc--------ccCccccC--
Confidence 45662222465 5556677766 7999999985321 12 22222 22221234 555531 00121110
Q ss_pred CCCCCCCCccc--CCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHH-hhcCCC----cccC--cccccCCCcc
Q 005783 301 DFGESAIGRVA--PVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNL-CLADGF----DMFP--SLLVTDGSCM 371 (677)
Q Consensus 301 d~Ge~a~~~yg--sVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~-~~~~gf----~~y~--~Ll~~dG~~W 371 (677)
+...++ .+=-+.--..++++|+..|||.+|+++.. .+.|..+-.+ ...-.+ ..|. ....||.-.
T Consensus 95 -----~~~~~~~~e~Hi~adIa~a~~~Y~~~TgD~~~l~~~g-~eil~etArfw~sr~~~~~~~g~y~i~~V~GPDEY~- 167 (370)
T PF03632_consen 95 -----GPWPAGDYEIHINADIAYAIWQYYQATGDEEFLREYG-AEILFETARFWASRVEYNEDTGRYEIRNVTGPDEYH- 167 (370)
T ss_dssp -------HHHHTT-THHHHHHHHHHHHHHHHH---TTTTTHH-HHHHHHHHHHHHHH-EEETTTTEEE--SB--SSTTS-
T ss_pred -----CCCCchHhhhcchHHHHHHHHHHHHhCCcHHHHHccC-HHHHHHHHHHHHHheEEcCCCCeEEecccCchhccc-
Confidence 100110 12234556778999999999999998721 2222222222 211111 1221 111122210
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHHHHhhcC
Q 005783 372 IDRRMGIHGHPLEIQALFYTALRCSREMLTVSD 404 (677)
Q Consensus 372 mD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg 404 (677)
..---..++|+++=..|+.|.+++..++
T Consensus 168 -----~~V~NnayTN~ma~~~L~~A~~~~~~~~ 195 (370)
T PF03632_consen 168 -----ENVDNNAYTNAMAKWNLRLAAEAAERLG 195 (370)
T ss_dssp ------SBS--HHHHHHHHHHHHHHHHHHTTS-
T ss_pred -----CCCCCcHHHHHHHHHHHHHHHHHHHHCc
Confidence 0111348999999999999999999885
No 33
>PRK13807 maltose phosphorylase; Provisional
Probab=59.75 E-value=1.4e+02 Score=36.59 Aligned_cols=80 Identities=10% Similarity=0.012 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhcCCC----cccC--cccccCCCcccccccCCCCCchhhHHHHHHH
Q 005783 319 WIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGF----DMFP--SLLVTDGSCMIDRRMGIHGHPLEIQALFYTA 392 (677)
Q Consensus 319 fIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~~gf----~~y~--~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~A 392 (677)
-..++++|+..|||.+|+++..+.-.++-+-=|...-.| +.|. ....||.-. ..----.++|.+.-..
T Consensus 430 Iaya~~~Y~~~TgD~~fl~~~G~e~l~etArfw~s~~~~~~~~~~y~I~~V~GPDEY~------~~vdNNayTN~ma~~~ 503 (756)
T PRK13807 430 IAYAIYNYTNYTGDESYLKEEGLEVLVEIARFWADRVHFSKRKNKYMIHGVTGPNEYE------NNVNNNWYTNYIAAWT 503 (756)
T ss_pred HHHHHHHHHHHhCCHHHHHhcCHHHHHHHHHHHHHheEEeCCCCeEEECCcccccccC------CCCCCchhHHHHHHHH
Confidence 346999999999999999873211111111112221111 1121 111122100 0001248999999999
Q ss_pred HHHHHHHHhhcC
Q 005783 393 LRCSREMLTVSD 404 (677)
Q Consensus 393 Lr~aaeLa~~lg 404 (677)
|+.|.+++..++
T Consensus 504 l~~A~~~~~~l~ 515 (756)
T PRK13807 504 LEYTLENLDKVK 515 (756)
T ss_pred HHHHHHHHHHhc
Confidence 999999988764
No 34
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=54.15 E-value=1.4e+02 Score=35.79 Aligned_cols=81 Identities=14% Similarity=-0.002 Sum_probs=52.1
Q ss_pred cchHHHHHHHHHHHHhHhhhccc--------cceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCC------hHHHH
Q 005783 187 EETEIEKEAWRLLQEAVVTYCES--------PIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGE------GEIVR 252 (677)
Q Consensus 187 ~~~~~~~~A~~lLr~~~~~~~~~--------p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~------pEiar 252 (677)
+.+..+++|.+-|+...+.-.+. +.|-.+-.. ...+|+.++ ||..++.+++..+. .+.++
T Consensus 333 ~~~p~l~kA~~~L~~~Qi~~~~~w~~~~~~~~~GGW~f~~----~~~~~pd~d--dTa~~L~AL~~~~~~~~~~~~~~i~ 406 (635)
T TIGR01507 333 ADHDALVKAGEWLLDKQITVPGDWAVKRPNLEPGGWAFQF----DNVYYPDVD--DTAVVVWALNGLRLPDERRRRDAMT 406 (635)
T ss_pred CCCHHHHHHHHHHHhhcccCCCCccccCCCCCCCccCCCC----CCCCCCCch--hHHHHHHHHHHcCCCccccchHHHH
Confidence 34678999999888876642111 112122110 123566665 88888888754331 25788
Q ss_pred HHHHHHHhhccccccccccCC
Q 005783 253 NFLLHTLQLQSWEKTVDCYSP 273 (677)
Q Consensus 253 ~~L~~l~~lQs~e~~~~~~~~ 273 (677)
..+.+++.+|..++.|..|..
T Consensus 407 ra~~wLl~~Qn~dGgw~af~~ 427 (635)
T TIGR01507 407 KAFRWIAGMQSSNGGWGAFDV 427 (635)
T ss_pred HHHHHHHHhcCCCCCEecccC
Confidence 889999999999988877663
No 35
>COG1554 ATH1 Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]
Probab=53.73 E-value=5.2e+02 Score=31.98 Aligned_cols=78 Identities=12% Similarity=0.022 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhc----CCCcccC--cccccCCCcccccccCCCCCchhhHHHHHHHH
Q 005783 320 IILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA----DGFDMFP--SLLVTDGSCMIDRRMGIHGHPLEIQALFYTAL 393 (677)
Q Consensus 320 Iial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~----~gf~~y~--~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~AL 393 (677)
..|++.|+++|||.+++++..+.-.++-..=|... ++-+.|. ++..||.-. ..----.++|.+.=.-|
T Consensus 440 AyAv~~Y~q~TgD~~yl~~~G~evl~etArFW~srv~~~~~~~~y~I~gV~GPdEY~------~~InNN~fTN~ma~w~L 513 (772)
T COG1554 440 AYAVWNYWQVTGDDSYLADCGLEVLLETARFWASRVHFSDRNGRYEIHGVTGPDEYH------NHVNNNAFTNLMAAWNL 513 (772)
T ss_pred HHHHHHHHhhcCcHHHHHhcCHHHHHHHHHHHHHHheecccCCeEEEecCcCchhhh------ccccchHHHHHHHHHHH
Confidence 34899999999999999973211112211112221 1222222 111111100 00002378899888888
Q ss_pred HHHHHHHhhc
Q 005783 394 RCSREMLTVS 403 (677)
Q Consensus 394 r~aaeLa~~l 403 (677)
..+.++++.+
T Consensus 514 ~~ale~~~~~ 523 (772)
T COG1554 514 EYALEILEWL 523 (772)
T ss_pred HHHHHHHHHH
Confidence 8888887754
No 36
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=46.96 E-value=1.8e+02 Score=31.28 Aligned_cols=99 Identities=10% Similarity=-0.010 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHH
Q 005783 316 GLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRC 395 (677)
Q Consensus 316 tLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~ 395 (677)
.-..|.++.+ ++.|||.+.++. +.+.++.|.+.+..+....|.... + .+|-.. .....+.....|+..
T Consensus 83 ~af~l~ala~-~~~tg~~~~~~~--A~~~~~~l~~~~~d~~~g~~~~~~--~-~~~~~~------r~~n~~mhl~eA~l~ 150 (346)
T PF07221_consen 83 QAFALLALAE-ARATGDPEALEL--AEQTLEFLERRFWDPEGGGYRESF--D-PDWSPP------RGQNPHMHLLEAFLA 150 (346)
T ss_dssp HHHHHHHHHH-HHCTT-TTHHHH--HHHHHHHHHHHTEETTTTEE--EE--T-TTSSCB------EEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHhCChhHHHH--HHHHHHHHHHHhcccccCcceecc--C-CccccC------CCCChhHHHHHHHHH
Confidence 3466777778 688999877654 357777777766443322221000 0 011101 114555555566654
Q ss_pred HHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 005783 396 SREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKK 436 (677)
Q Consensus 396 aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~ 436 (677)
+.++.. ...+.+++..|-+.|..+|+.++.+
T Consensus 151 l~~~~~----------~~~~~~~a~~l~~~~~~~f~~~~~g 181 (346)
T PF07221_consen 151 LYEATG----------DPRYLDRAEELLDLFLDRFADPESG 181 (346)
T ss_dssp HHHHHH----------HHHHHHHHHHHHHHHHTTCHHCCTT
T ss_pred HHHhcc----------CHHHHHHHHHHHHHHHHHHHHhccC
Confidence 444332 1224456677788888888875543
No 37
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=45.68 E-value=6e+02 Score=30.36 Aligned_cols=132 Identities=14% Similarity=0.064 Sum_probs=71.9
Q ss_pred cchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCCh----HHHHHHHHHHHhhc
Q 005783 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEG----EIVRNFLLHTLQLQ 262 (677)
Q Consensus 187 ~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~p----Eiar~~L~~l~~lQ 262 (677)
..+..++++++-+++.++.- +.|.+... .+=.++| |+.+++.++...|.. +..+..+.+++..|
T Consensus 275 ~~~~~~~~~l~~l~~~~~~~---~~g~~~~~-------~~~s~~w--DTala~~AL~~ag~~~~~~~~l~ka~~wL~~~Q 342 (634)
T cd02892 275 PDSPAFKRHLERIDDFLWLG---PEGMKMCQ-------TNGSQVW--DTALAVQALLEAGLAPEFDPALKKALDWLLESQ 342 (634)
T ss_pred CCCHHHHHHHHHHHhcEEEe---cCCcEEEc-------CCCCchH--HHHHHHHHHHHcCCCccchHHHHHHHHHHHHHH
Confidence 46789999999998865432 34554431 1233566 999999998655533 35677888888888
Q ss_pred c--ccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhc
Q 005783 263 S--WEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD 340 (677)
Q Consensus 263 s--~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~ 340 (677)
- ..+.+..+.+ ..-|..|. |.... ..+-.+|.|---+.++.......+...-.....
T Consensus 343 ~~~~~gdw~~~~~--~~~~GGW~------------------fs~~~-~~~pd~d~Ta~~l~AL~~~~~~~~~~~~~~~~~ 401 (634)
T cd02892 343 ILDNPGDWKVKYR--HLRKGGWA------------------FSTAN-QGYPDSDDTAEALKALLRLQELPPFGEKVSRER 401 (634)
T ss_pred cCCCCCchhhhCC--CCCCCCCC------------------CCCCC-CCCCCcCchHHHHHHHHHhhccCCcchhhHHHH
Confidence 5 3222211110 11111110 11101 113357778777777766554432111122245
Q ss_pred HHHHHHHHHHH
Q 005783 341 VQTGIKLIMNL 351 (677)
Q Consensus 341 vq~al~~Il~~ 351 (677)
++++++|+++.
T Consensus 402 i~~Av~wLl~~ 412 (634)
T cd02892 402 LYDAVDWLLGM 412 (634)
T ss_pred HHHHHHHHHhc
Confidence 67778887754
No 38
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=37.87 E-value=2.7e+02 Score=33.19 Aligned_cols=121 Identities=19% Similarity=0.122 Sum_probs=67.2
Q ss_pred cchHHHHHHHHHHHHhHhhhccccceeeeccCCCC--------CCCCCCCcccchhhHHHHHHHhccC---------ChH
Q 005783 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGD--------KQPLNYDQVFIRDFVPSALAFLLKG---------EGE 249 (677)
Q Consensus 187 ~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~--------a~~~~Y~~vwGRDt~Is~lglL~~G---------~pE 249 (677)
+....+++|++.|.+..+ .++.|-.....+.. ....+|+.+- ||..++.+++..+ ..+
T Consensus 326 ~~~~~l~ka~~wL~~~Q~---~~~~gdw~~~~~~~~~GGW~fs~~~~~~pd~d--~Ta~~l~AL~~~~~~~~~~~~~~~~ 400 (634)
T cd02892 326 EFDPALKKALDWLLESQI---LDNPGDWKVKYRHLRKGGWAFSTANQGYPDSD--DTAEALKALLRLQELPPFGEKVSRE 400 (634)
T ss_pred cchHHHHHHHHHHHHHHc---CCCCCchhhhCCCCCCCCCCCCCCCCCCCCcC--chHHHHHHHHHhhccCCcchhhHHH
Confidence 567788899998888654 01222211111100 0112344332 8888888875333 236
Q ss_pred HHHHHHHHHHhhccccccccccCCCCCC--CCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHH
Q 005783 250 IVRNFLLHTLQLQSWEKTVDCYSPGQGL--MPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYG 327 (677)
Q Consensus 250 iar~~L~~l~~lQs~e~~~~~~~~~~G~--iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~ 327 (677)
.++..+.+++.+|..++.+..|....+. +.+-. + ..++|.... .+.++|.|---+.+|....
T Consensus 401 ~i~~Av~wLl~~Qn~dGgf~~y~~~~~~~~~~~~~-----p----------~e~~g~~~~-d~~~~~~Ta~~l~aL~~~~ 464 (634)
T cd02892 401 RLYDAVDWLLGMQNSNGGFAAFEPDNTYHWLENLN-----P----------FEDFGDIMI-DPPYVECTGSVLEALGLFG 464 (634)
T ss_pred HHHHHHHHHHhccCCCCCEeeecCCCchhhHhhcC-----c----------hhhhccccc-CCCCcchHHHHHHHHHHhc
Confidence 7888899999999998887666532221 11100 0 113342222 3457888888788887654
Q ss_pred H
Q 005783 328 K 328 (677)
Q Consensus 328 ~ 328 (677)
+
T Consensus 465 ~ 465 (634)
T cd02892 465 K 465 (634)
T ss_pred c
Confidence 3
No 39
>PF13249 Prenyltrans_2: Prenyltransferase-like; PDB: 1O6R_B 1O6Q_B 1H35_C 1H3A_C 1SQC_A 1UMP_A 1O6H_C 1O79_B 1GSZ_C 1H37_C ....
Probab=34.72 E-value=79 Score=27.76 Aligned_cols=37 Identities=19% Similarity=0.011 Sum_probs=24.4
Q ss_pred chhhHHHHHHHhccCChHHHHHH--HHHHHhhccccccc
Q 005783 232 IRDFVPSALAFLLKGEGEIVRNF--LLHTLQLQSWEKTV 268 (677)
Q Consensus 232 GRDt~Is~lglL~~G~pEiar~~--L~~l~~lQs~e~~~ 268 (677)
.-++..++.++...|.......+ +.++...|..++.+
T Consensus 23 ~~~T~~al~aL~~~g~~~~~~~~~~~~~L~~~q~~dGg~ 61 (113)
T PF13249_consen 23 VWDTAFALLALAALGEEPDRDRAAAVEWLLSQQNPDGGW 61 (113)
T ss_dssp HHHHHHHHHHHHHHTSHHCHHHHHHHHHHHHHB-TTSGB
T ss_pred HHHHHHHHHHHHHhCCcccHHHHHHHHHHHHhCCCCCCc
Confidence 34677777777666666656667 88888777766543
No 40
>PF07721 TPR_4: Tetratricopeptide repeat; InterPro: IPR011717 This entry includes tetratricopeptide-like repeats not detected by the IPR001440 from INTERPRO, IPR013105 from INTERPRO and IPR011716 from INTERPRO models. The tetratricopeptide repeat (TPR) motif is a protein-protein interaction module found in multiple copies in a number of functionally different proteins that facilitates specific interactions with a partner protein(s) [].; GO: 0042802 identical protein binding
Probab=32.33 E-value=67 Score=21.74 Aligned_cols=25 Identities=16% Similarity=0.187 Sum_probs=20.7
Q ss_pred hhhHHHHHHHHHHhCChHHHHHHHH
Q 005783 564 PTLLWQFTLACIKMGRLGLAQKAVA 588 (677)
Q Consensus 564 P~l~wl~a~al~r~G~~~~A~~ll~ 588 (677)
|+.....+.++.+.|+.++|+++++
T Consensus 1 ~~a~~~la~~~~~~G~~~eA~~~l~ 25 (26)
T PF07721_consen 1 PRARLALARALLAQGDPDEAERLLR 25 (26)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 5666777888999999999998874
No 41
>PLN03012 Camelliol C synthase
Probab=29.10 E-value=2.2e+02 Score=35.06 Aligned_cols=89 Identities=8% Similarity=-0.056 Sum_probs=55.3
Q ss_pred chHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccc-----hhhHHHHHHHhccCCh----HHHHHHHHHH
Q 005783 188 ETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFI-----RDFVPSALAFLLKGEG----EIVRNFLLHT 258 (677)
Q Consensus 188 ~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwG-----RDt~Is~lglL~~G~p----Eiar~~L~~l 258 (677)
.+..+++|.+-|.+ ++++.|-.-.+--. -..+.|...=+ =-|+.+++|++..|++ +.++....+|
T Consensus 637 ~~~~Irrav~fLls-----~Q~~DGGWGEs~~S-c~~~~y~~~~~~~S~~~qTaWAl~aLi~ag~~~~~~~~i~Rg~~~L 710 (759)
T PLN03012 637 DCEAIRKGVHFLLA-----AQKDNGGWGESYLS-CPKKIYIAQEGEISNLVQTAWALMGLIHAGQAERDPIPLHRAAKLI 710 (759)
T ss_pred CcHHHHHHHHHHHH-----hcCCCCCcCCCCCC-CCCccccCCCCCCCcHHHHHHHHHHHHHcCCCCCCcHHHHHHHHHH
Confidence 35889999997776 46666655431000 00112222111 1356667777766754 4678888999
Q ss_pred HhhccccccccccCCCCCCCCCcce
Q 005783 259 LQLQSWEKTVDCYSPGQGLMPASFK 283 (677)
Q Consensus 259 ~~lQs~e~~~~~~~~~~G~iP~sfk 283 (677)
+..|..++.|.+.. -.|.+|++|-
T Consensus 711 l~~Q~~dG~W~q~~-~~G~F~~~~~ 734 (759)
T PLN03012 711 INSQLENGDFPQQE-ATGAFLKNCL 734 (759)
T ss_pred HHcccCCCCCCCce-eeeeeccceE
Confidence 99999998875544 4788888874
No 42
>PF06051 DUF928: Domain of Unknown Function (DUF928); InterPro: IPR010328 This is a family of uncharacterised bacterial proteins.
Probab=26.59 E-value=73 Score=32.27 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 005783 385 IQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (677)
Q Consensus 385 IQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~r 418 (677)
-|++||.||..++++...... +..+...+.+-
T Consensus 143 e~GiWyDaL~~La~lr~~~p~--d~~l~~~W~~L 174 (189)
T PF06051_consen 143 ENGIWYDALATLAELRRSQPN--DPQLAQDWQEL 174 (189)
T ss_pred HhCchHHHHHHHHHHHHcCCC--ChHHHHHHHHH
Confidence 478999999999999876543 55666654443
No 43
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. Bacterial SQCY catalyzes the convertion of squalene to hopene or diplopterol. Eukaryotic OSQCY transforms the 2,3-epoxide of squalene to compounds such as, lanosterol (a metabolic precursor of cholesterol and steroid hormones) in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain. This group also contains SQCY-like archael sequences and some bacterial SQCY's which lack this minor domain.
Probab=25.44 E-value=4.4e+02 Score=28.08 Aligned_cols=120 Identities=15% Similarity=0.126 Sum_probs=62.5
Q ss_pred HHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccC----ChHHHHHHHHHHHhhccccccc
Q 005783 193 KEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKG----EGEIVRNFLLHTLQLQSWEKTV 268 (677)
Q Consensus 193 ~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G----~pEiar~~L~~l~~lQs~e~~~ 268 (677)
++|++-|++ +.+|.|-.... + .=..++..++.++...| ..+.++..+.++++.|....
T Consensus 2 ~~~~~~L~~-----~Q~~dG~W~~~---------~--~~~~~Ta~~~~al~~~g~~~~~~~~~~ka~~~l~~~q~~~~-- 63 (348)
T cd02889 2 RRALDFLLS-----LQAPDGHWPGE---------Y--SQVWDTALALQALLEAGLAPEFDPALKKALEWLLKSQIRDN-- 63 (348)
T ss_pred chHHHHHHH-----hccCCCCcccc---------C--CchHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHhcCCCCC--
Confidence 466776766 45666655431 1 11245666666665444 45678888888887773211
Q ss_pred cccCCCCCCCCCcceeccccCCCcccccccCCCCC----CCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHH
Q 005783 269 DCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFG----ESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTG 344 (677)
Q Consensus 269 ~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~G----e~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~a 344 (677)
.++ ++..++ + .++.| .... .+..+|.|-.-+.++.++...+++.....+..++++
T Consensus 64 -----~~~-~~~~~~--~------------~~~Ggw~y~~~~~-~~~~~~~Ta~~l~al~~~~~~~~~~~~~~~~~i~~a 122 (348)
T cd02889 64 -----PDD-WKVKYR--H------------LRKGGWAFSTANQ-GYPDSDDTAEALKALLRLQKKPPDGKKVSRERLYDA 122 (348)
T ss_pred -----CCc-hhhcCC--C------------CCCCcCcccCcCC-CCCCCCChHHHHHHHHHhhccCcccchhhHHHHHHH
Confidence 111 111110 0 00111 0000 123467888888888888777654222223345677
Q ss_pred HHHHHHH
Q 005783 345 IKLIMNL 351 (677)
Q Consensus 345 l~~Il~~ 351 (677)
++|+++.
T Consensus 123 ~~~L~~~ 129 (348)
T cd02889 123 VDWLLSM 129 (348)
T ss_pred HHHHHHh
Confidence 7777754
No 44
>KOG4125 consensus Acid trehalase [Carbohydrate transport and metabolism]
Probab=24.40 E-value=1.4e+02 Score=34.59 Aligned_cols=80 Identities=10% Similarity=-0.002 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHH-hhc----CCCcccCcccccCCCcccccccCCCC--CchhhHHHHHH
Q 005783 319 WIILLRAYGKITGDYALQERVDVQTGIKLIMNL-CLA----DGFDMFPSLLVTDGSCMIDRRMGIHG--HPLEIQALFYT 391 (677)
Q Consensus 319 fIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~-~~~----~gf~~y~~Ll~~dG~~WmD~r~gr~G--~pVEIQALwY~ 391 (677)
-..|+..|+..|.|.+|.+- ...+.++.+-++ |.. ++-..|.++- .|++.--..| --|+.||+.=+
T Consensus 373 v~~Af~~y~h~~~D~e~~~~-t~Wpi~~~VA~F~~SRv~~~~s~~~yHL~n------VM~PDE~H~~VNn~VYTNa~~k~ 445 (682)
T KOG4125|consen 373 VAMAFSIYLHEGIDDEYLRY-TTWPIIKNVAQFFTSRVKYNSSLGLYHLYN------VMDPDEFHNHVNNGVYTNAGIKT 445 (682)
T ss_pred HHHHHHHHHHhccchhhhcc-CCchhHHHHHHHhhheeEecCccceeeeec------cCCchhcccccccchhhhHHHHH
Confidence 34589999999999997765 123344444443 322 2222232111 2333221111 34999999999
Q ss_pred HHHHHHHHHhhcCC
Q 005783 392 ALRCSREMLTVSDG 405 (677)
Q Consensus 392 ALr~aaeLa~~lg~ 405 (677)
+|++|+.||..+|.
T Consensus 446 ~L~FA~~LA~hlG~ 459 (682)
T KOG4125|consen 446 LLKFATDLANHLGE 459 (682)
T ss_pred HHHHHHHHHHhhCC
Confidence 99999999999984
No 45
>PLN02993 lupeol synthase
Probab=23.72 E-value=1.5e+03 Score=28.20 Aligned_cols=304 Identities=13% Similarity=0.084 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCC-cccchhhHHHHHHHhccCCh----HHHHHHHHHHHhhc
Q 005783 188 ETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYD-QVFIRDFVPSALAFLLKGEG----EIVRNFLLHTLQLQ 262 (677)
Q Consensus 188 ~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~-~vwGRDt~Is~lglL~~G~p----Eiar~~L~~l~~lQ 262 (677)
.+..++++++-++..+..- +.|+..- .+. ++| |+.++.-+++.+|-. ...+..+.++..-|
T Consensus 387 ~~~~~~~~l~ri~d~lw~~---edgm~~q---------~~gSqvW--DTa~a~qAl~~agl~~~~~~~l~kA~~~L~~~Q 452 (763)
T PLN02993 387 NGDHFKKHLARIPDYMWVA---EDGMKMQ---------SFGSQLW--DTGFAIQALLASDLSDETDDVLRRGHNYIKKSQ 452 (763)
T ss_pred CCHHHHHHHHHhhhcEEEe---CCceEEc---------CCCCchH--HHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHh
Q ss_pred cccccccc-----cCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCCh--hH
Q 005783 263 SWEKTVDC-----YSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDY--AL 335 (677)
Q Consensus 263 s~e~~~~~-----~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~--~f 335 (677)
-.+..-.. .....|=.|-++ .-..|-.+|-|-=-+.++-...+...|. +-
T Consensus 453 v~~~~~gdw~~~~r~~~~GgW~Fs~-----------------------~~~gyp~sDdTAe~lka~l~l~~~~~~~~~~~ 509 (763)
T PLN02993 453 VRENPSGDFKSMYRHISKGAWTLSD-----------------------RDHGWQVSDCTAEALKCCMLLSMMPADVVGQK 509 (763)
T ss_pred ccCCCCCchHhhCCCCCCCcCcCcc-----------------------CCCCCCcCCchHHHHHHHHHHhhCcccccccc
Q ss_pred HhhhcHHHHHHHHHHH-hhcCCCcccC---------cccccCC--CcccccccCCCCCchhhHHHHHHHHHHHHHHHhhc
Q 005783 336 QERVDVQTGIKLIMNL-CLADGFDMFP---------SLLVTDG--SCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVS 403 (677)
Q Consensus 336 l~~~~vq~al~~Il~~-~~~~gf~~y~---------~Ll~~dG--~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~l 403 (677)
+.+..+.+|++|++.. ....||..|. .+-.+|- ..|+|... +|+-+-.-.||....++....
T Consensus 510 ~~~~~l~~av~wlL~mQn~dGG~aafe~~~~~~~le~ln~ae~f~~~miD~~~------~dcT~~vl~aL~~~~~~~p~~ 583 (763)
T PLN02993 510 IDPEQLYDSVNLLLSLQSENGGVTAWEPVRAYKWLELLNPTDFFANTMVEREY------VECTSAVIQALVLFKQLYPDH 583 (763)
T ss_pred chHHHHHHHHHHHHhhccCCCCEEeeeCCCchhHHHcCCHHHhhcCcccCCCC------cCHHHHHHHHHHHhcccCcch
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeecccc
Q 005783 404 DGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQ 483 (677)
Q Consensus 404 g~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~ 483 (677)
. .+++.+.+++-++-|+. .-++.|-..|...
T Consensus 584 r---~~ei~~~i~rAv~yL~~----------------------------------------------~Q~~DGSW~G~Wg 614 (763)
T PLN02993 584 R---TKEIIKSIEKAVQFIES----------------------------------------------KQTPDGSWYGNWG 614 (763)
T ss_pred h---hhhHHHHHHHHHHHHHH----------------------------------------------hcCCCCCcccccc
Q ss_pred CCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCcccc---C
Q 005783 484 PAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHN---G 560 (677)
Q Consensus 484 p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHN---G 560 (677)
.+..=.-.+++..+.++--..-+.+..++-++.|.+ -...|.+|+.-+.+ +....|.+ |
T Consensus 615 v~y~YgT~~aL~aL~a~G~~~~~~~~IrrAv~fLls---------------~Q~~DGGWGEs~~S---~~~~~y~~~~~~ 676 (763)
T PLN02993 615 ICFIYATWFALGGLAAAGKTYNDCLAMRKGVHFLLT---------------IQRDDGGWGESYLS---CPEQRYIPLEGN 676 (763)
T ss_pred cccCcHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHH---------------hcCCCCCcCcCcCc---CCCcccccCCCC
Q ss_pred CCchhhHHHHHHHHHHhCChHHHHHHHHH-----HHhhCCCCCCCc
Q 005783 561 GSWPTLLWQFTLACIKMGRLGLAQKAVAL-----AENRLPLDHWPE 601 (677)
Q Consensus 561 gVWP~l~wl~a~al~r~G~~~~A~~ll~~-----a~~~l~~~~~pE 601 (677)
..=+.-.+.-..||+..|..+.....+.. ...+...|+|+|
T Consensus 677 ~St~~qTAwAllaL~~aG~~~~~~~~l~Rgi~~L~~~Q~~~G~W~q 722 (763)
T PLN02993 677 RSNLVQTAWAMMGLIHAGQAERDLIPLHRAAKLIITSQLENGDFPQ 722 (763)
T ss_pred CCchhhHHHHHHHHHHcCCCCCCcHHHHHHHHHHHhccCCCCCCCC
No 46
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol, and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol.
Probab=23.67 E-value=3.9e+02 Score=32.09 Aligned_cols=117 Identities=14% Similarity=0.166 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCC---hHHHHHHHHHHHhhcccc
Q 005783 189 TEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGE---GEIVRNFLLHTLQLQSWE 265 (677)
Q Consensus 189 ~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~---pEiar~~L~~l~~lQs~e 265 (677)
...+++|++-|++ ..++.|...+. | ..++..-+..++.++...|. .+.++..+.+++..|..+
T Consensus 476 ~~ai~rav~~L~~-----~Q~~dGsW~g~--------W-g~~~~Y~T~~al~aL~~~G~~~~~~~i~rA~~~Ll~~Q~~D 541 (634)
T TIGR03463 476 TRAISRGVRFLRS-----RQREDGSFPGS--------W-GVCFTYGTFHGVMGLRAAGASPDDMALQRAAAWLRSYQRAD 541 (634)
T ss_pred HHHHHHHHHHHHH-----hcCCCCCcccc--------C-CCCCcHHHHHHHHHHHHcCCCcCcHHHHHHHHHHHHccCCC
Confidence 4567778887776 35666665441 1 22333445666666654453 366788888888777776
Q ss_pred ccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHH
Q 005783 266 KTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGI 345 (677)
Q Consensus 266 ~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al 345 (677)
+.|. ..+.. +..+.+-+ +...++-.|-|-+.+|... |.. ..+.+++++
T Consensus 542 GgWg----------~~~~s------------~~~~~y~~---~~~S~~~~TA~Al~aL~~~----g~~---~~~~i~rgi 589 (634)
T TIGR03463 542 GGWG----------EVYES------------CLQARYVE---GKQSQAVMTSWALLALAEA----GEG---GHDAVQRGV 589 (634)
T ss_pred CCcc----------CccCc------------cccccccC---CCCCcHHHHHHHHHHHHHc----CCc---CCHHHHHHH
Confidence 6541 11100 00011100 0124566889978887654 321 134567888
Q ss_pred HHHHHH
Q 005783 346 KLIMNL 351 (677)
Q Consensus 346 ~~Il~~ 351 (677)
+|+++-
T Consensus 590 ~~L~~~ 595 (634)
T TIGR03463 590 AWLRSR 595 (634)
T ss_pred HHHHHh
Confidence 887764
No 47
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=23.35 E-value=4.2e+02 Score=31.88 Aligned_cols=119 Identities=17% Similarity=0.202 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccC---ChHHHHHHHHHHHhhcccc
Q 005783 189 TEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKG---EGEIVRNFLLHTLQLQSWE 265 (677)
Q Consensus 189 ~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G---~pEiar~~L~~l~~lQs~e 265 (677)
+..+++|++-|++ +.+|.|-.-+. -+ .+| .. -+..++.++...| ..+.++..+.++...|..+
T Consensus 470 ~~~i~rav~~L~~-----~Q~~dG~W~g~----wg-~~~--~Y--~T~~al~aL~~~g~~~~~~~i~rAv~wL~~~Q~~D 535 (635)
T TIGR01507 470 WPVIERAVEYLKR-----EQEPDGSWFGR----WG-VNY--LY--GTGAVLSALKAVGIDTREPYIQKALAWLESHQNPD 535 (635)
T ss_pred hHHHHHHHHHHHH-----ccCCCCCCccC----CC-Ccc--cc--HHHHHHHHHHHcCCCcccHHHHHHHHHHHHhcCCC
Confidence 6788888888887 45666643220 00 112 11 1333333332233 3467788899999888887
Q ss_pred ccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHH
Q 005783 266 KTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGI 345 (677)
Q Consensus 266 ~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al 345 (677)
+.|..- ..+. + .+.+... ..+++-.|-|-+++|.+.... ..+.+++++
T Consensus 536 GGWge~-------~~sy---~------------~~~~~g~---g~s~~s~TA~AL~AL~~ag~~-------~~~~I~rav 583 (635)
T TIGR01507 536 GGWGED-------CRSY---E------------DPAYAGK---GASTASQTAWALIALIAAGRA-------ESEAARRGV 583 (635)
T ss_pred CCCCCC-------Cccc---c------------cccccCC---CCCcHHHHHHHHHHHHHhCCC-------CcHHHHHHH
Confidence 755211 0011 0 1111110 123566899999999875321 124577888
Q ss_pred HHHHHHhh
Q 005783 346 KLIMNLCL 353 (677)
Q Consensus 346 ~~Il~~~~ 353 (677)
+++++--.
T Consensus 584 ~~L~~~Q~ 591 (635)
T TIGR01507 584 QYLVETQR 591 (635)
T ss_pred HHHHHhcC
Confidence 88776443
No 48
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol, and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol.
Probab=22.10 E-value=1e+03 Score=28.67 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=66.9
Q ss_pred cchHHHHHHHHHHHHhHhhh---------ccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhc---cC-------C
Q 005783 187 EETEIEKEAWRLLQEAVVTY---------CESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLL---KG-------E 247 (677)
Q Consensus 187 ~~~~~~~~A~~lLr~~~~~~---------~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~---~G-------~ 247 (677)
+....+++|.+-|+...+.- ...+.|=.+..+. ..+|+. .=|+.-++.+++. .+ .
T Consensus 325 ~~~~~l~kA~~wL~~~Q~~~~~gd~~~~~~~~~~GGW~f~~~----~~~~pd--sD~Ta~~L~Al~~~~~~~~~~~~~~~ 398 (634)
T TIGR03463 325 RHRRMLERAARFLEANQMLEDTAEPQRFFRDPAKGGWCFSDG----DHGWPV--SDCTAEALSASLVLEPLGLNPEERVP 398 (634)
T ss_pred hhhHHHHHHHHHHHHhcCCcCCCCchhcCCCCCCCccccccC----CCCCCc--cccHHHHHHHHHHHhhcCCccccccc
Confidence 45578899999888876521 1122333333221 134432 2345445455432 12 1
Q ss_pred hHHHHHHHHHHHhhccccccccccCCCCC-CCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHH
Q 005783 248 GEIVRNFLLHTLQLQSWEKTVDCYSPGQG-LMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAY 326 (677)
Q Consensus 248 pEiar~~L~~l~~lQs~e~~~~~~~~~~G-~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y 326 (677)
.+..+..+.+++.+|..++.+..|...++ ..-+.+. + .| .|+.... .+.++|.|-=-|.+|..+
T Consensus 399 ~~~l~~av~~Ll~~Qn~dGGw~~y~~~~~~~~l~~~~----~-----~~-----~f~~~~~-d~~~~d~Ta~~l~aL~~~ 463 (634)
T TIGR03463 399 QARLQDAVEFILSRQNEDGGFGTYERQRGPRVLELLN----P-----SE-----MFSTCMT-DVSYVECTSSCLQALAAW 463 (634)
T ss_pred HHHHHHHHHHHHHhcCCCCCEeccCCCCcHHHHhcCC----h-----HH-----hhccccc-CCCcCcHHHHHHHHHHHH
Confidence 25777889999999999998877764221 1100000 0 00 1232222 356789998888888887
Q ss_pred HHH
Q 005783 327 GKI 329 (677)
Q Consensus 327 ~~~ 329 (677)
.+.
T Consensus 464 ~~~ 466 (634)
T TIGR03463 464 RKH 466 (634)
T ss_pred hhc
Confidence 543
No 49
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=20.38 E-value=2.1e+02 Score=21.30 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=24.0
Q ss_pred hhhHHHHHHHHHHhCChHHHHHHHHHHHhhC
Q 005783 564 PTLLWQFTLACIKMGRLGLAQKAVALAENRL 594 (677)
Q Consensus 564 P~l~wl~a~al~r~G~~~~A~~ll~~a~~~l 594 (677)
|...-.++.++.+.|+.++|.++++.+...-
T Consensus 1 p~~~~~la~~~~~~G~~~~A~~~~~~~l~~~ 31 (44)
T PF13428_consen 1 PAAWLALARAYRRLGQPDEAERLLRRALALD 31 (44)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 3445567888889999999999998765543
Done!