Query 005783
Match_columns 677
No_of_seqs 234 out of 687
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 07:19:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z07_A Putative uncharacterize 100.0 9E-34 3.1E-38 306.5 27.5 345 190-629 3-418 (420)
2 3c68_A Uncharacterized protein 100.0 1.3E-32 4.3E-37 319.9 35.2 378 186-633 278-757 (761)
3 2jg0_A Periplasmic trehalase; 100.0 4.9E-32 1.7E-36 304.1 26.1 311 225-635 121-504 (535)
4 3qde_A Cellobiose phosphorylas 100.0 3.8E-30 1.3E-34 301.1 25.4 326 230-625 356-720 (811)
5 1v7w_A Chitobiose phosphorylas 100.0 1.5E-29 5.2E-34 294.5 25.6 302 229-590 344-669 (807)
6 3rrs_A Cellobiose phosphorylas 100.0 1.9E-29 6.6E-34 295.4 26.3 326 230-625 363-733 (822)
7 2okx_A Rhamnosidase B; alpha b 99.9 2.2E-22 7.5E-27 239.2 32.3 330 184-639 542-884 (956)
8 3cih_A Putative alpha-rhamnosi 99.9 1.3E-21 4.5E-26 226.7 27.6 317 185-638 308-643 (739)
9 1ulv_A Glucodextranase; GH fam 99.9 5.9E-21 2E-25 228.0 29.9 349 187-634 281-668 (1020)
10 1lf6_A Glucoamylase; (alpha/al 99.9 1.2E-19 4.1E-24 209.0 30.1 351 186-634 292-667 (684)
11 2fba_A Glucoamylase Glu1; (alp 99.7 1.4E-14 4.7E-19 161.4 28.6 334 210-634 49-486 (492)
12 1gai_A Glucoamylase-471; hydro 99.6 2.8E-14 9.4E-19 158.2 26.7 324 210-634 34-429 (472)
13 2vn4_A Glucoamylase; hydrolase 99.6 6.4E-14 2.2E-18 159.4 28.5 351 210-658 33-455 (599)
14 2p0v_A Hypothetical protein BT 99.4 3.7E-12 1.3E-16 140.5 19.9 364 185-633 69-468 (489)
15 3p2c_A Putative glycosyl hydro 99.3 1.8E-10 6.3E-15 126.3 20.1 342 209-633 75-450 (463)
16 3qt9_A Putative uncharacterize 99.2 6.3E-10 2.2E-14 121.0 22.8 365 185-633 25-422 (427)
17 3qry_B Putative uncharacterize 99.2 8.8E-10 3E-14 119.9 22.1 364 186-631 23-420 (426)
18 1h54_A Maltose phosphorylase; 96.3 0.16 5.5E-06 59.4 20.0 79 316-400 429-513 (754)
19 2rdy_A BH0842 protein; PSI-II, 95.6 0.63 2.2E-05 54.7 21.2 99 316-418 450-556 (803)
20 2eab_A Alpha-fucosidase; glyco 93.5 1.2 4E-05 53.2 16.4 83 315-405 507-599 (899)
21 2gz6_A N-acetyl-D-glucosamine 78.4 29 0.00099 36.0 14.1 94 320-432 59-153 (388)
22 3gt5_A N-acetylglucosamine 2-e 65.9 1.4E+02 0.0047 31.5 17.0 99 318-436 56-154 (402)
23 1w6k_A Lanosterol synthase; cy 49.5 1.7E+02 0.0057 34.0 14.0 140 187-360 353-503 (732)
24 3k7x_A LIN0763 protein; Q92DQ0 46.3 1.6E+02 0.0054 30.8 12.2 102 311-431 148-250 (349)
25 2sqc_A Squalene-hopene cyclase 44.8 1E+02 0.0034 35.0 11.0 134 188-351 329-478 (631)
26 1w6k_A Lanosterol synthase; cy 39.3 2.9E+02 0.01 31.9 14.0 145 186-351 405-570 (732)
27 2gz6_A N-acetyl-D-glucosamine 38.0 1.6E+02 0.0056 30.3 10.6 99 313-435 114-213 (388)
28 2zzr_A Unsaturated glucuronyl 35.7 4.4E+02 0.015 28.2 17.2 135 192-352 136-282 (397)
29 1fp3_A N-acyl-D-glucosamine 2- 25.5 5.7E+02 0.019 26.4 12.3 102 314-436 52-164 (402)
30 2zbl_A Putative isomerase; N-a 24.4 6.3E+02 0.022 26.5 15.6 103 312-436 50-152 (421)
No 1
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=9e-34 Score=306.54 Aligned_cols=345 Identities=16% Similarity=0.123 Sum_probs=244.7
Q ss_pred HHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHh-hccccccc
Q 005783 190 EIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQ-LQSWEKTV 268 (677)
Q Consensus 190 ~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~-lQs~e~~~ 268 (677)
.+.++|+..|+. |.+..+++|+ ..+|..+|+||+.+++++++.. +++.+++.|..++. .|
T Consensus 3 ~l~~~a~~~l~~-----n~~~~~~vP~-------~~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~~~q------ 63 (420)
T 2z07_A 3 PLRTKAVEVLQR-----NSRGAFTVPA-------HGLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFDYGQ------ 63 (420)
T ss_dssp CHHHHHHHHHHH-----HBCSSCBCSS-------TTCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHH-----cCCCCCcCCC-------CCCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH------
Confidence 477899999987 4444455555 2489999999999999998865 68888887776664 44
Q ss_pred cccCCCCCCCCCcceeccccCCCcccccccCCC-CCC-CCC-CcccCCCcHHHHHHHHHHHHHHhCC----hhHHhh--h
Q 005783 269 DCYSPGQGLMPASFKVRNVPLESNKFEEVLDPD-FGE-SAI-GRVAPVDSGLWWIILLRAYGKITGD----YALQER--V 339 (677)
Q Consensus 269 ~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd-~Ge-~a~-~~ygsVDAtLWfIial~~Y~~~TGD----~~fl~~--~ 339 (677)
..+|+||+.+. +.+.|. + +..++ .|. .++ .++.+.|.++++++++++|+++||| .+|+++ |
T Consensus 64 ----~~~G~ip~~v~--~~~~~~---y-~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~p 133 (420)
T 2z07_A 64 ----GPDGMLPHIVF--HEQSRD---Y-FPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYLFP 133 (420)
T ss_dssp ----CTTCCCCSEEE--CCSCCC---C-C-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred ----hhCCCcceecc--cCCCcc---c-CcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHHHHH
Confidence 35889997431 101000 0 00011 111 122 2456899999999999999999999 899998 6
Q ss_pred cHHHHHHHHHHHhh--cCCCcccCcccccCCC----cccccc----cC------C-------------------------
Q 005783 340 DVQTGIKLIMNLCL--ADGFDMFPSLLVTDGS----CMIDRR----MG------I------------------------- 378 (677)
Q Consensus 340 ~vq~al~~Il~~~~--~~gf~~y~~Ll~~dG~----~WmD~r----~g------r------------------------- 378 (677)
.+++.++++++..+ ++|...+.-. ..+|. .|+|.. .+ |
T Consensus 134 ~l~~~~~~~~~~~d~~~~Gl~~~~~~-we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~~~ 212 (420)
T 2z07_A 134 KLLAFHRWLYHARDPYRTGLVVIVHP-WESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLY 212 (420)
T ss_dssp HHHHHHHHHHHHHCTTCCSCCCBSSG-GGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCCceeeecC-CCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHHHHHHH
Confidence 56666666655442 2343321100 11221 454431 00 1
Q ss_pred ------------------CCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 005783 379 ------------------HGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEI 440 (677)
Q Consensus 379 ------------------~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~ 440 (677)
.+.+|++||++|.+++.+++|++.+|. . ++.+.++++++|+.|++ ||+++++.+.
T Consensus 213 ~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~--~---a~~~~~~a~~~~~ai~~-~Wd~~~g~~~- 285 (420)
T 2z07_A 213 LFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQE--D---PYEIEEWIVRGEVGLEA-LWDREAGFYF- 285 (420)
T ss_dssp HHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTC--C---CHHHHHHHHHHHHHHHH-TEETTTTEEC-
T ss_pred HHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCc--c---HHHHHHHHHHHHHHHHH-hhCcccCeeE-
Confidence 124789999999999999999999975 2 56677888899999999 9997665430
Q ss_pred hhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHh
Q 005783 441 YRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAK 520 (677)
Q Consensus 441 yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~ 520 (677)
+ +....| ...+ .....+++++++|+++++++++|++.+.
T Consensus 286 ---------d-------------------~~~~~g---------~~~~--~~~~~~~~pL~~g~~~~~~a~~v~~~l~-- 324 (420)
T 2z07_A 286 ---------S-------------------WDLVAG---------EPIA--VKTSAGFLPLFAGTPHQGRASLLAQEAE-- 324 (420)
T ss_dssp ---------C-------------------EETTTT---------EECC--CCBGGGGTHHHHTCSCHHHHHHHHHHHH--
T ss_pred ---------e-------------------eeCCCC---------Ceec--cccHHhHHHHHcCCCCHHHHHHHHHHHH--
Confidence 0 000000 0000 2245677899999999999999999986
Q ss_pred hhhhc--cCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCC
Q 005783 521 WDDLV--GHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDH 598 (677)
Q Consensus 521 w~~Ll--tp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~l~~~~ 598 (677)
+++ +++|+++++| +++.|+|.+||||++||+++++++.||.++|+.++|.+++......+..++
T Consensus 325 --~~~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~~~~ 390 (420)
T 2z07_A 325 --RWGEKARYLLPSVDP------------TSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALMEREG 390 (420)
T ss_dssp --HHTTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred --HHhccCCCCcCcCCC------------cCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCC
Confidence 566 8999999877 456788999999999999999999999999999999998876444444578
Q ss_pred CCccccCCCCCccCCCCCccchHhHHHHHHH
Q 005783 599 WPEYYDTRTGRFTGKQSRLFQTWTIAGFLTS 629 (677)
Q Consensus 599 ~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a 629 (677)
+.|.||+.+|.|.|+. +|+||+|.+|.+
T Consensus 391 ~~E~yd~~~g~~~g~~---~fgWs~~~~l~l 418 (420)
T 2z07_A 391 FREYYDPLTGQGRGGE---GFSWSAALALFW 418 (420)
T ss_dssp SEEEECTTTCCEEEEE---SCHHHHHHHHHH
T ss_pred eeeeeCCCCCCcCCCC---CCchHHHHHHHH
Confidence 8999999999998887 999999998865
No 2
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=100.00 E-value=1.3e-32 Score=319.94 Aligned_cols=378 Identities=15% Similarity=0.106 Sum_probs=260.4
Q ss_pred CcchHHHHHHHHHHHHhHhhhccccceeeeccC--CCCCCCCCCCc--ccchhhHHHHHHHhccCChHHHHHHHHHHHhh
Q 005783 186 REETEIEKEAWRLLQEAVVTYCESPIGTVAAND--PGDKQPLNYDQ--VFIRDFVPSALAFLLKGEGEIVRNFLLHTLQL 261 (677)
Q Consensus 186 ~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~--~~~a~~~~Y~~--vwGRDt~Is~lglL~~G~pEiar~~L~~l~~l 261 (677)
++.+.|..+|+..|+... ..+.|.++... |. ++.+||.. +|+||+.+.+++++. .++++||+.|+.++.+
T Consensus 278 ~~~~~l~~~a~~tL~~n~----~~~~g~v~~~~v~P~-~g~~wF~~~~~w~wDs~~~a~gL~~-~~~elAr~~L~~l~~~ 351 (761)
T 3c68_A 278 PEQTRVAVKAIETLNGNW----RSPGGAVKFNTVTPS-VTGRWFSGNQTWPWDTWKQAFAMAH-FNPDIAKENIRAVFSW 351 (761)
T ss_dssp HHHHHHHHHHHHHHHHTE----ECCBTTBCSCEECSC-TTCTTTCTTCBCHHHHHHHHHHHTT-TCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhc----cCccCcCCCCeEEec-CCCCCCCcCCeeccHHHHHHHHHHH-cCHHHHHHHHHHHHHh
Confidence 345567777777776632 22334333211 11 56789998 999999999999875 4899999999999988
Q ss_pred ccccccccccC-CCCCCCCCcceeccccCCCcccccccCCC-CCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh-
Q 005783 262 QSWEKTVDCYS-PGQGLMPASFKVRNVPLESNKFEEVLDPD-FGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER- 338 (677)
Q Consensus 262 Qs~e~~~~~~~-~~~G~iP~sfki~h~e~~~~~~e~~l~pd-~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~- 338 (677)
|.+.. +... ..+|+||+.+. + . ..|+ .|+.+. ++......+||++++++|+++|||.+|+++
T Consensus 352 Q~~~~--d~~r~~~~G~IP~~~~--~-~---------~~p~r~g~~~~-~~~~~sqPPl~~~av~~yy~~tgD~~fL~e~ 416 (761)
T 3c68_A 352 QIQPG--DSVRPQDVGFVPDLIA--W-N---------LSPERGGDGGN-WNERNTKPSLAAWSVMEVYNVTQDKTWVAEM 416 (761)
T ss_dssp CCCTT--CSSCGGGTTCCCSBBC--S-S---------CCGGGTSCCSS-CBCSCCCCCCHHHHHHHHHHHHCCHHHHHHH
T ss_pred hhhcc--cCCccCCCCEeeeeec--c-C---------CcccccCcccc-ccCCCCCcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 85433 2222 25899999641 1 0 0111 232222 222233458889999999999999999998
Q ss_pred -hcHHHHHHHHHHHhh--cCCCcccCcc-----cccCC------------------------------------------
Q 005783 339 -VDVQTGIKLIMNLCL--ADGFDMFPSL-----LVTDG------------------------------------------ 368 (677)
Q Consensus 339 -~~vq~al~~Il~~~~--~~gf~~y~~L-----l~~dG------------------------------------------ 368 (677)
|.+++.++|.++..+ ++|...|... -.+.|
T Consensus 417 ~P~L~~~~~w~~~~rd~d~~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~a~ 496 (761)
T 3c68_A 417 YPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAAS 496 (761)
T ss_dssp HHHHHHHHHHHHHHSCTTCSSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcCccEEecccccccccCCCcchhccccccccchhcccccccchhccccccccchhhhhhhcc
Confidence 666677777666543 3454443110 00000
Q ss_pred -Cccccc-------------------------------ccCCCCC---------chhhHHHHHHHHHHHHHHHhhcCCCC
Q 005783 369 -SCMIDR-------------------------------RMGIHGH---------PLEIQALFYTALRCSREMLTVSDGSG 407 (677)
Q Consensus 369 -~~WmD~-------------------------------r~gr~G~---------pVEIQALwY~ALr~aaeLa~~lg~~~ 407 (677)
.++||- ..+..|. +|++||+||.|++.+++||+.+|.
T Consensus 497 weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~LG~-- 574 (761)
T 3c68_A 497 WESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGK-- 574 (761)
T ss_dssp HHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred ccCCCCcchhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 011211 0022243 899999999999999999999973
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCcc
Q 005783 408 SNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHM 487 (677)
Q Consensus 408 ~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~ 487 (677)
.+.++.++++++++++.|+++||+++.+.+.-|..... .++ ....|..+ ++
T Consensus 575 -~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~~~~---------------~~~-------~~~~g~~~----sn-- 625 (761)
T 3c68_A 575 -PEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDK---------------PLA-------NGCAGKPI----VE-- 625 (761)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEECCSS---------------CCT-------TSCSSCBC----GG--
T ss_pred -hHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEecCCC---------------ccc-------ccccccee----ec--
Confidence 66778899999999999999999987664311000000 000 00000000 00
Q ss_pred CcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhH
Q 005783 488 DFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLL 567 (677)
Q Consensus 488 D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~ 567 (677)
+.+..++++++++|++++++++++++.|.+. ..|.+++|+++++| .++.++|.+||||++||.++
T Consensus 626 --~~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~~-~~l~t~~Girtls~------------~~p~y~p~~yw~GpvW~~~~ 690 (761)
T 3c68_A 626 --RGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAAL------------TNPAFGADIYWRGRVWVDQF 690 (761)
T ss_dssp --GCCCGGGGHHHHTTCSCHHHHHHHHHHHTCT-TTTCCSSCSCSSCT------------TCTTCCTTCTTTTCEEHHHH
T ss_pred --chhhHHHHHHHHcCCCCHHHHHHHHHHHhCh-hhhcCCCCccccCC------------CCcccCCCccccCCcccchH
Confidence 1234577889999999999999999999852 25789999999877 24678889999999999999
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHh----hCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHh
Q 005783 568 WQFTLACIKMGRLGLAQKAVALAEN----RLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLV 633 (677)
Q Consensus 568 wl~a~al~r~G~~~~A~~ll~~a~~----~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL 633 (677)
|+++.||.++|+.++|.+++..... ....+.++|+||+.+|.|.|+. +|+||+|.+|+++..+
T Consensus 691 ~lli~aL~~~G~~d~A~~l~~~~~~~~~~~~~~G~~~E~yd~~tg~p~G~~---~fgWSaa~~l~ll~~y 757 (761)
T 3c68_A 691 WFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAP---NFSWSAAHLYMLYNDF 757 (761)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTTTSSSCCCSEECTTTCCEESCS---SCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCceeeEecCCCCCcCcCC---CchHHHHHHHHHHHHH
Confidence 9999999999999999999875322 2345899999999999999887 9999999988877654
No 3
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=100.00 E-value=4.9e-32 Score=304.08 Aligned_cols=311 Identities=14% Similarity=0.139 Sum_probs=227.4
Q ss_pred CCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCC
Q 005783 225 LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (677)
Q Consensus 225 ~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge 304 (677)
.||..+|+||+.++++|++..|.+++|+++|..++.+|. ..|+||+..
T Consensus 121 g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~----------~~G~IPng~---------------------- 168 (535)
T 2jg0_A 121 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEID----------TYGHIPNGN---------------------- 168 (535)
T ss_dssp TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSSCCSBS----------------------
T ss_pred ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc----------cCCcccCCC----------------------
Confidence 589999999999999999988999999999999987773 368888822
Q ss_pred CCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhc------------------CCCcc--cC-cc
Q 005783 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA------------------DGFDM--FP-SL 363 (677)
Q Consensus 305 ~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~------------------~gf~~--y~-~L 363 (677)
..||.+++.++.|++++++|+++|+| +|+++ +.+.|+...+|... +|+.. |. ..
T Consensus 169 --r~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~--~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~l~~y~~~~ 243 (535)
T 2jg0_A 169 --RSYYLSRSQPPFFALMVELLAQHEGD-AALKQ--YLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDR 243 (535)
T ss_dssp --BGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHH--HHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEEECCCCSC
T ss_pred --CccCCCCCCccHHHHHHHHHHHcCCH-HHHHH--HHHHHHHHHHHHHhCCcccCccccccceeecCCCCcceeeccCC
Confidence 12577888999999999999999986 89987 23444444444321 12111 10 00
Q ss_pred c----------------ccC---CCcccccc---------cCC----CC----------CchhhHHHHHHHHHHHHHHHh
Q 005783 364 L----------------VTD---GSCMIDRR---------MGI----HG----------HPLEIQALFYTALRCSREMLT 401 (677)
Q Consensus 364 l----------------~~d---G~~WmD~r---------~gr----~G----------~pVEIQALwY~ALr~aaeLa~ 401 (677)
- ..+ ..+|+|.+ .+| .| .|||+||++|.|++.+++|++
T Consensus 244 ~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~lA~ 323 (535)
T 2jg0_A 244 DTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASK 323 (535)
T ss_dssp CSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 0 000 00122111 012 12 579999999999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeecc
Q 005783 402 VSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGN 481 (677)
Q Consensus 402 ~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~ 481 (677)
.+| ..+.+..+.++++.+|++|+++||+++.+.+ |. + +
T Consensus 324 ~lG---~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y--~D---------------------------~---------~- 361 (535)
T 2jg0_A 324 AAG---DNAMANQYETLANARQKGIEKYLWNDQQGWY--AD---------------------------Y---------D- 361 (535)
T ss_dssp HHT---CHHHHHHHHHHHHHHHHHHHHHSEETTTTEE--CC---------------------------E---------E-
T ss_pred HhC---ChHHHHHHHHHHHHHHHHHHHhCcCCCCCEE--EE---------------------------E---------e-
Confidence 997 3667888999999999999999999776532 00 0 0
Q ss_pred ccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCC
Q 005783 482 LQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG 561 (677)
Q Consensus 482 v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGg 561 (677)
+..+.. .+..+..+++++++|+++++++++|++.|++ +|+++.|||++++ ++.+||+|+
T Consensus 362 ~~~~~~-~~~~~~s~~~PL~~gi~~~e~a~~v~~~l~~---~l~t~~GlrT~s~-----------------~s~~yW~Gp 420 (535)
T 2jg0_A 362 LKSHKV-RNQLTAAALFPLYVNAAAKDRANKMATATKT---HLLQPGGLNTTSV-----------------KSGQQWDAP 420 (535)
T ss_dssp TTTTEE-CCCCBGGGGHHHHTTCSCHHHHHHHHHHHHH---HTEETTEECSBSC-----------------CCSSSSSTT
T ss_pred CCCCCE-eeeehhhhHHHHhcCCCCHHHHHHHHHHHHH---HhccCCCCCCCcC-----------------CCccccCCC
Confidence 000000 0133556777899999999999999999986 8999999998853 235899999
Q ss_pred -CchhhHHHHHHHHHHhCChHHHHHHHHHH----Hhh-CCCCCCCccccCCCCCccCC----CCCccchHhHHHHHHHHH
Q 005783 562 -SWPTLLWQFTLACIKMGRLGLAQKAVALA----ENR-LPLDHWPEYYDTRTGRFTGK----QSRLFQTWTIAGFLTSKM 631 (677)
Q Consensus 562 -VWP~l~wl~a~al~r~G~~~~A~~ll~~a----~~~-l~~~~~pE~FDG~tg~p~G~----~ac~~QAWSaA~~L~a~~ 631 (677)
+|||++++++.||.++|+.++|.++.... ... ...+.++|+||+.++.+.|+ +.+.+|+||+|.+|.+..
T Consensus 421 NvW~~~~~l~i~gL~~yG~~~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~ 500 (535)
T 2jg0_A 421 NGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 500 (535)
T ss_dssp EECHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 99999999999999999999998887542 221 12489999999998877765 134599999999987776
Q ss_pred HhcC
Q 005783 632 LVEN 635 (677)
Q Consensus 632 lL~~ 635 (677)
...+
T Consensus 501 ~y~~ 504 (535)
T 2jg0_A 501 LICP 504 (535)
T ss_dssp HHSC
T ss_pred Hhhh
Confidence 6543
No 4
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.97 E-value=3.8e-30 Score=301.14 Aligned_cols=326 Identities=17% Similarity=0.146 Sum_probs=228.8
Q ss_pred ccc-hhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCC
Q 005783 230 VFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIG 308 (677)
Q Consensus 230 vwG-RDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~ 308 (677)
-|| ||++.-+++++.. .||++|..|+.++..|- .+|.+|+.|. +.. ..|..+++
T Consensus 356 ~~G~RD~~qd~~~~~~~-~p~~~r~~il~~~~~Q~----------~dG~~~h~~~----p~~----------~~g~~~~~ 410 (811)
T 3qde_A 356 GMGFRDSNQDLLGFVHQ-IPERARERLLDLAATQL----------EDGSAYHQYQ----PLT----------KKGNNEIG 410 (811)
T ss_dssp CEEHHHHHHHHHTTTTT-CHHHHHHHHHHHHTTBC----------TTSCBCSEEC----TTT----------CCEECTTC
T ss_pred CCccHHHHHHHHHHHhc-CHHHHHHHHHHHHhhcc----------cCCCccceec----CCC----------CCCCCCCC
Confidence 566 9999999998754 79999999997774443 4677888652 110 01211221
Q ss_pred cccCCCcHHHHHHHHHHHHHHhCChhHHhh--h---------cHHHHHHHHHHHhhcCCCcccCcccccCCCcccccc--
Q 005783 309 RVAPVDSGLWWIILLRAYGKITGDYALQER--V---------DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRR-- 375 (677)
Q Consensus 309 ~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~---------~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r-- 375 (677)
+..+|.+||+|+++++|++.|||.+||++ | .+.+.++..++++.. .++... |......+|+|.-
T Consensus 411 -~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~-~~g~~G-L~~~g~~DWnD~ln~ 487 (811)
T 3qde_A 411 -SNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVN-NLGPHG-LPLIGRADWNDCLNL 487 (811)
T ss_dssp -CCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHT-CBCTTS-SBBCBTCSSSTTCCS
T ss_pred -CCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHh-cCCCCC-CcccccCCchhhccc
Confidence 44689999999999999999999999986 2 233444444444431 011111 1112234676642
Q ss_pred ------c-----------CCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 005783 376 ------M-----------GIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKIN 438 (677)
Q Consensus 376 ------~-----------gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~ 438 (677)
+ ++.|..|+++++||.||+.+++||+.+| +.+.++.+++++++||++|+++||+.+ .
T Consensus 488 ~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~lG---d~~~A~~~~~~A~~lk~a~~~~~Wdg~--~- 561 (811)
T 3qde_A 488 NCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYMG---LEEEARKAQQHIDAMKEAILKYGYDGE--W- 561 (811)
T ss_dssp SCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHSBCSS--S-
T ss_pred cccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHhccCcC--e-
Confidence 2 2678999999999999999999999997 478888999999999999999999631 1
Q ss_pred hhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHH-HHHHHHHHH
Q 005783 439 EIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK-QNESILNLI 517 (677)
Q Consensus 439 ~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~e-qa~~Vv~~i 517 (677)
|+ +.+..+| -.++.. ...+-++++.++.+++++|+++++ |++++++.|
T Consensus 562 --y~--------------------------ra~~~dg-~~~gs~--~~~~~qi~~~~q~~avlsGia~~e~ra~~~m~~v 610 (811)
T 3qde_A 562 --FL--------------------------RAYDDFG-RKVGSK--ENEEGKIFIESQGFCVMAEIGLEDGKALKALDSV 610 (811)
T ss_dssp --BC--------------------------CEECTTS-CEESST--TSSSCCEESHHHHHHHHTTCSSSSSHHHHHHHHH
T ss_pred --EE--------------------------EEEcCCC-CCCCcc--CCCCceEEecchhHHHHhCCCCchHHHHHHHHHH
Confidence 11 1111111 111110 011224777788789999999999 999999999
Q ss_pred HHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhhC---
Q 005783 518 EAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRL--- 594 (677)
Q Consensus 518 ~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~l--- 594 (677)
.+ +|++|+|||+++|++....+. .+....|.|..||||++|||.+..++.|++++|+.++|.+++.......
T Consensus 611 ~~---~L~t~~Glrll~p~f~~~~~d--~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~ 685 (811)
T 3qde_A 611 KK---YLDTPYGLVLQNPAFTRYYIE--YGEISTYPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPAYIED 685 (811)
T ss_dssp HH---HHCCTTCCCSEESCCCSCCTT--TGGGGTSCTTSTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHCGGGSGG
T ss_pred HH---HhCCCcceEeecCCccccCCC--CCceeccCCCccccccccchHHHHHHHHHHHcCCHHHHHHHHHHhChhhhcc
Confidence 88 899999999999987432221 1233468999999999999999999999999999999999997632211
Q ss_pred ---CCCCCCccccCCCC-CccCCCCCccchHhHHH
Q 005783 595 ---PLDHWPEYYDTRTG-RFTGKQSRLFQTWTIAG 625 (677)
Q Consensus 595 ---~~~~~pE~FDG~tg-~p~G~~ac~~QAWSaA~ 625 (677)
...+.||.|++... ......+|.+|+|..++
T Consensus 686 ~~~~~~~~Py~~~~~~~~~~~p~~Gr~~~~w~tGs 720 (811)
T 3qde_A 686 VSDIHKLEPYVYAQMVAGKDAKRHGEAKNSWLTGT 720 (811)
T ss_dssp GHHHHCSCTTSCEEEECCTTSTTTTCEEEESCSTH
T ss_pred hhhhcCcCcEEeccccccccCCCCCCCcchhHHHH
Confidence 13589999988652 10111255699996554
No 5
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.97 E-value=1.5e-29 Score=294.52 Aligned_cols=302 Identities=16% Similarity=0.109 Sum_probs=210.4
Q ss_pred cccc-hhhHHHHHHHhccCChHHHHHHHHHHHhhccccccc-cccC-----CCCCCCCCcceeccccCCCcccccccCCC
Q 005783 229 QVFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTV-DCYS-----PGQGLMPASFKVRNVPLESNKFEEVLDPD 301 (677)
Q Consensus 229 ~vwG-RDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~-~~~~-----~~~G~iP~sfki~h~e~~~~~~e~~l~pd 301 (677)
..|| ||+++++++++ .++|+++|++|+.++..|..++.+ ..+. +.+|.+|...++. +.++
T Consensus 344 ~~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~~~G~~~p~~~p~~~~~~~g~~~~~~~~~------------~~g~ 410 (807)
T 1v7w_A 344 TGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPT------------VVPT 410 (807)
T ss_dssp CSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBCTTSCBCSEECGGGGCC----------------------------
T ss_pred CccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhccccCCCcceeeeeccccccccccCCccccc------------cccC
Confidence 4699 99999999977 789999999999999888776632 1111 1233333211000 0001
Q ss_pred CCC----CCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh--hc-----------HHHHHHHHHHHhhcCCCcccCccc
Q 005783 302 FGE----SAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VD-----------VQTGIKLIMNLCLADGFDMFPSLL 364 (677)
Q Consensus 302 ~Ge----~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~~-----------vq~al~~Il~~~~~~gf~~y~~Ll 364 (677)
.|+ .++. ....|+++||++++++|+++|||.+|+++ |. +++++++++..+..+|...+
T Consensus 411 ~~~~~~~~g~~-~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~~GL~~~---- 485 (807)
T 1v7w_A 411 PSDEDKIHGIK-DTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICKG---- 485 (807)
T ss_dssp ------CCCGG-GCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCTTSCBEE----
T ss_pred CCcchhhcCCC-CCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCCCCCccc----
Confidence 111 1111 12249999999999999999999999998 53 67777776665444443322
Q ss_pred ccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 005783 365 VTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYK 444 (677)
Q Consensus 365 ~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~ 444 (677)
...+|.|.--+..|.++|+|||||.||+.+++||+.+| ..+.++.+++++++||++|+++||+++.+.| +
T Consensus 486 --~~~DW~D~~~~~~g~~v~~~a~~y~al~~~a~la~~lG---~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f---~-- 555 (807)
T 1v7w_A 486 --LRADWNDCLNLGGGESSMVSFLHFWALQEFIDLAKFLG---KDQDVNTYTEMAANVREACETHLWDDEGGWY---I-- 555 (807)
T ss_dssp --ETCSSSTTCCCEEEEEHHHHHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHSEETTTTEE---C--
T ss_pred --CCCCCCCcCCCCCCeehhHHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHhccCCCCCee---e--
Confidence 23468664221278999999999999999999999997 4677888999999999999999999764322 1
Q ss_pred ccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhh
Q 005783 445 TEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDL 524 (677)
Q Consensus 445 te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~w~~L 524 (677)
..+..++-. .+.. ...+.+++..++.+++++|+++++|++++++.|.+ +|
T Consensus 556 ------------------------~~~~~d~~~-~g~~--~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L 605 (807)
T 1v7w_A 556 ------------------------RGLTKNGDK-IGTA--QQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HL 605 (807)
T ss_dssp ------------------------CEECTTSCE-ESCT--TCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HH
T ss_pred ------------------------eeeccCCCC-cCCc--cCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hc
Confidence 000001100 0100 11123466778888999999999999999999987 88
Q ss_pred ccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHH
Q 005783 525 VGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALA 590 (677)
Q Consensus 525 ltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a 590 (677)
.+++|+|+++|++... ....+.-..|.|..||||++|||.+..++.|+.++|+.++|.+++...
T Consensus 606 ~~~~G~~~~~p~~~~~--~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A~~l~~~~ 669 (807)
T 1v7w_A 606 FSPYGLHLNAPSFSTP--NDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDAL 669 (807)
T ss_dssp EETTEECSEESCCCSC--CTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCceeecCCccccc--CcCCceeeccCCccccccccccchHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 8999999999976321 111122345788899999999999999999999999999999998764
No 6
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.97 E-value=1.9e-29 Score=295.40 Aligned_cols=326 Identities=17% Similarity=0.148 Sum_probs=228.7
Q ss_pred ccc-hhhHHHHHHHhccCChHHHHHHHHHHHhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCC
Q 005783 230 VFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIG 308 (677)
Q Consensus 230 vwG-RDt~Is~lglL~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~ 308 (677)
-|| ||++.-+++++.. .||++|..|+.++..|- .+|.+|+.|. +.. ..|...++
T Consensus 363 ~~G~RD~~qd~~~~~~~-~pe~ar~~il~~~~~Q~----------~dG~v~h~~~----p~~----------~~g~~~~~ 417 (822)
T 3rrs_A 363 GMGFRDSNQDLLGFVHL-IPERARERIIDIASTQF----------ADGSAYHQYQ----PLT----------KRGNNDIG 417 (822)
T ss_dssp CEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHTTCC----------TTSCCCSEEE----TTT----------TEECTTTC
T ss_pred CCchHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhc----------ccCcccceec----CcC----------CCCccCCC
Confidence 466 9999999998754 79999999997774443 4788888663 210 01211221
Q ss_pred cccCCCcHHHHHHHHHHHHHHhCChhHHhh--h---------cHHHHHHHHHHHhhcCCCcccCcccccCCCcccccc--
Q 005783 309 RVAPVDSGLWWIILLRAYGKITGDYALQER--V---------DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRR-- 375 (677)
Q Consensus 309 ~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~---------~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r-- 375 (677)
+..+|.+||+++++++|++.|||.+||++ | .+.+.++..++++... ++... |......+|+|.-
T Consensus 418 -~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-~g~~G-Lp~~g~gDWnD~ln~ 494 (822)
T 3rrs_A 418 -SGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTH-RGPHG-LPLIGRADWNDCLNL 494 (822)
T ss_dssp -SCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHS-BCTTS-SBBCBTCSSSTTCCT
T ss_pred -CcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhc-CCCCC-CcccCCCcchhhccc
Confidence 34689999999999999999999999987 2 2333444444444310 11111 1111233566532
Q ss_pred ------c-----------CCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 005783 376 ------M-----------GIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKIN 438 (677)
Q Consensus 376 ------~-----------gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~ 438 (677)
+ ++.|..|++++|||.||+.+++||+.+| +.+.++.+++++++|+++|+++||+.. .
T Consensus 495 ~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~G---~~~~A~~~~~~A~~lk~a~~~~~Wdg~-~-- 568 (822)
T 3rrs_A 495 NCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARRG---LADVADRARGHVAEMRDALLTDGWDGS-W-- 568 (822)
T ss_dssp TCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHTTTBCSS-S--
T ss_pred ccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHHHhccCcc-e--
Confidence 2 2678999999999999999999999997 477889999999999999999999531 1
Q ss_pred hhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHH-------HHH
Q 005783 439 EIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK-------QNE 511 (677)
Q Consensus 439 ~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~e-------qa~ 511 (677)
|+ +.+..+| -.++.. ....-++++.++.+++++|+++++ |++
T Consensus 569 --y~--------------------------ra~d~dg-~~~gs~--~~~~~~i~~~~q~~avlsGia~~e~~~~~~~~a~ 617 (822)
T 3rrs_A 569 --FL--------------------------RAYDYYG-NPIGTD--AHDEGKIWIEPQGFAVMAGVGVGEGPQDTDAPAI 617 (822)
T ss_dssp --BC--------------------------CEECTTS-CEESCT--TSSSCCEEHHHHHHHHHTTTTCCSSTTCTTSHHH
T ss_pred --eE--------------------------EEEcCCC-CCcccc--CCCCceEEeccchhHhhcCCCCcccccchHHHHH
Confidence 11 1111111 111110 111224677777788999999999 999
Q ss_pred HHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHH--
Q 005783 512 SILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVAL-- 589 (677)
Q Consensus 512 ~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~-- 589 (677)
++++.|.+ +|++|+|+|+++|++.. +....+....|+|..||||++|||.+..++.|++++|+.++|.+++..
T Consensus 618 ~al~~v~~---~L~t~~Girll~p~f~~--~~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~ 692 (822)
T 3rrs_A 618 KALDSVNE---MLATDHGMVLQYPAYTT--YQVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYKRIT 692 (822)
T ss_dssp HHHHHHHH---HTEETTEEBSEESCCSS--CCTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHHH---HcCCCCeEEEcCCCccc--ccCCCCcccccCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhC
Confidence 99999988 99999999999998742 222234456789999999999999999999999999999999999865
Q ss_pred -HHhh---CCCCCCCccccCCCC-CccCCCCCccchHhHHH
Q 005783 590 -AENR---LPLDHWPEYYDTRTG-RFTGKQSRLFQTWTIAG 625 (677)
Q Consensus 590 -a~~~---l~~~~~pE~FDG~tg-~p~G~~ac~~QAWSaA~ 625 (677)
+... ....+.||+|++... ......+|.+|+|..++
T Consensus 693 p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~G~~~~~w~tGs 733 (822)
T 3rrs_A 693 PAYREDISDVHRLEPYVYAQMIAGKEAVRHGEAKNSWLTGT 733 (822)
T ss_dssp HHHHGGGHHHHCSCSSSCEEEECCTTSTTTTCEEEESSSTH
T ss_pred cccccchhHhhccCcEEEeccccccCCCCCCCccchhhhhh
Confidence 2222 123589999998652 11111356699996654
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.91 E-value=2.2e-22 Score=239.20 Aligned_cols=330 Identities=15% Similarity=0.114 Sum_probs=223.9
Q ss_pred cCCcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCC-CCCcccchhhHHHHHHHh-ccCChHHHHHHHHHHHhh
Q 005783 184 TKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPL-NYDQVFIRDFVPSALAFL-LKGEGEIVRNFLLHTLQL 261 (677)
Q Consensus 184 ~~~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~-~Y~~vwGRDt~Is~lglL-~~G~pEiar~~L~~l~~l 261 (677)
.++..+++.+.|+..++..+..+ | ..++ .....|.||+.+++++++ ..|+++++|++|+.++..
T Consensus 542 sd~~lN~l~~~a~~tl~~n~~~~---~-----------tD~p~REr~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~ 607 (956)
T 2okx_A 542 SDALLNATWEISRHTTRLCMEDT---F-----------VDCPSYEQVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGS 607 (956)
T ss_dssp SCHHHHHHHHHHHHHHHHTBSSS---B-----------CSCTTTTCCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGG
T ss_pred CcHHHHHHHHHHHHHHHHhcccC---c-----------cCCCcccCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 35567888888888888753321 1 1112 245699999999999975 578999999999977644
Q ss_pred ccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh--h
Q 005783 262 QSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--V 339 (677)
Q Consensus 262 Qs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~--~ 339 (677)
|. .+|.+|+.++ +.. .....|.++||++++++|+++|||.+|+++ |
T Consensus 608 Q~----------~dG~ip~~~p-----------------~~~-----~~~~~~~~~~~i~~~~~yy~~tGD~~~L~e~yp 655 (956)
T 2okx_A 608 AD----------ETPLYLDQVP-----------------SAW-----SSVIPNWTFFWILACREYAAHTGNEAFAARIWP 655 (956)
T ss_dssp TT----------TCTTCCSBSS-----------------CSS-----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cc----------cCCCcCcccc-----------------ccc-----cCCCcChHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 42 4788888442 110 123568999999999999999999999998 5
Q ss_pred cHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 005783 340 DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRL 419 (677)
Q Consensus 340 ~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra 419 (677)
.++++++++.++...+|+..++. ..-.+|.|..-++.|.++..|+++|.||+.+++||+.+|. .+.++++++++
T Consensus 656 ~lk~~l~~~~~~~d~~GLl~~~~---~~~~DW~d~~~~~~G~~~~~~a~~~~al~~~a~lA~~LG~---~~~a~~y~~~A 729 (956)
T 2okx_A 656 AVKHTLTHYLEHIDDSGLLNMAG---WNLLDWAPIDQPNEGIVTHQNLFLVKALRDSRALAAAAGA---TEEADAFAARA 729 (956)
T ss_dssp HHHHHHHHHHTTBCTTSSBCCSS---CCCCCSSSCCCCSSSEEHHHHHHHHHHHHHHHHHHHHTTC---GGGGHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEeCC---CCccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHH
Confidence 55555555554443333333221 0124687653357788999999999999999999999974 44566788889
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhh
Q 005783 420 SALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWS 499 (677)
Q Consensus 420 ~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LA 499 (677)
++|++.|+++||+++.+.| . +.+..++ .| .+ .....+|+++
T Consensus 730 ~~lk~ai~~~~wd~~~g~y---~--------------------------d~~~~~g-------~~--~~-~~~~~s~~la 770 (956)
T 2okx_A 730 DLLAETINAVLWDEEKRAY---I--------------------------DCIHADG-------RR--SD-VYSMQTQVVA 770 (956)
T ss_dssp HHHHHHHHHHSEETTTTEE---C--------------------------SEECTTS-------CB--CC-CCBHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEE---E--------------------------eeecCCC-------Cc--cc-ccccHHHHHH
Confidence 9999999999999765532 0 0000000 00 00 0123477889
Q ss_pred hhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCcccc-CCCchhhHHHHHHHHHHhC
Q 005783 500 IVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHN-GGSWPTLLWQFTLACIKMG 578 (677)
Q Consensus 500 l~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHN-GgVWP~l~wl~a~al~r~G 578 (677)
+++|++++++++++ +.+.. + + |..||+ |++||+ +.++.|+.++|
T Consensus 771 ll~Gl~p~~~~~av-~~Ll~-------~-------~------------------~~gy~~~Gt~w~~--~~li~aLar~G 815 (956)
T 2okx_A 771 YLCGVAQGEREAVI-EGYLS-------S-------P------------------PPAFVQIGSPFMS--FFYYEALEKAG 815 (956)
T ss_dssp HHTTCSCHHHHHHH-HHHHH-------S-------C------------------CTTSBCCCSHHHH--HHHHHHHHHTT
T ss_pred HHhCCCCHHHHHHH-HHHhc-------C-------C------------------CcccccCCChhHH--HHHHHHHHHCC
Confidence 99999999998877 43332 1 0 346887 999987 77799999999
Q ss_pred ChHHHHHHHHHH---HhhCCCCCCCccccCCCCCcc--C-CCCCccchHhHHHHHHHHH-Hhc-CCCcC
Q 005783 579 RLGLAQKAVALA---ENRLPLDHWPEYYDTRTGRFT--G-KQSRLFQTWTIAGFLTSKM-LVE-NPEMA 639 (677)
Q Consensus 579 ~~~~A~~ll~~a---~~~l~~~~~pE~FDG~tg~p~--G-~~ac~~QAWSaA~~L~a~~-lL~-~p~~~ 639 (677)
+.++|.+++... ......+.++|.||+.++... + ...+..|+|++|....+++ ++. .|..+
T Consensus 816 ~~d~A~~ll~~~~~~~~~~g~tt~~E~~d~~~~~~~~~~~~~~s~nh~Wsag~~~~L~q~l~GI~p~~p 884 (956)
T 2okx_A 816 RQTLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYFLGSSILGVKRGAD 884 (956)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSSCCSSCSSCCTTSSSTTSSCSCSCCGGGCTHHHHHHHTTSCEEECSG
T ss_pred CHHHHHHHHHHHHHHHHhcCCCccceeccCCCCCcccCCCcccccCcHHHHHHHHHHHHHhcCccccCC
Confidence 999999998542 222334579999998764211 0 1112369999987655555 333 45433
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.89 E-value=1.3e-21 Score=226.74 Aligned_cols=317 Identities=15% Similarity=0.123 Sum_probs=211.0
Q ss_pred CCcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCC-CcccchhhHHHHHHHh-ccCChHHHHHHHHHHHhhc
Q 005783 185 KREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNY-DQVFIRDFVPSALAFL-LKGEGEIVRNFLLHTLQLQ 262 (677)
Q Consensus 185 ~~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y-~~vwGRDt~Is~lglL-~~G~pEiar~~L~~l~~lQ 262 (677)
++..+++.+.++..++..+. ++. ..+|-+ ...|..|+.++++..+ ..++++++++.|..+ |
T Consensus 308 d~~lN~i~~~~~~t~~~n~~-------~~~-------~DcP~RER~~W~GD~~~~~~~~~~~~~~~~~~~~~l~~~---~ 370 (739)
T 3cih_A 308 DEELNCIWEVGAYTMHLTTR-------EFF-------IDGIKRDRWVWSGDAIQSYLMNYYLFFDSESVKRTIWLL---R 370 (739)
T ss_dssp CHHHHHHHHHHHHHHHHTBS-------SSB-------CSBSSSCCCCCHHHHHHHHHHHHTTTCCHHHHHHHHHHH---H
T ss_pred hHHHHHHHHHHHHHHHHhcc-------CCC-------ccCcccccceecCchHHHHHHHHHHhCCHHHHHHHHHHh---c
Confidence 44566777777777766322 111 112322 5799999999988854 557899999887532 2
Q ss_pred cccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccC-CCcHHHHHHHHHHHHHHhCChhHHhh--h
Q 005783 263 SWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAP-VDSGLWWIILLRAYGKITGDYALQER--V 339 (677)
Q Consensus 263 s~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygs-VDAtLWfIial~~Y~~~TGD~~fl~~--~ 339 (677)
|.+|.. + ++++ +|.++||++++++|+++|||.+|+++ |
T Consensus 371 -------------g~~p~~------------------------~--~~~~~~d~~l~wi~~~~~yy~~tGD~~~L~e~~p 411 (739)
T 3cih_A 371 -------------GKDPVT------------------------S--HSNTIMDYTFYWFLSVYDYYMYSGDRHFVNQLYP 411 (739)
T ss_dssp -------------CCSSCC------------------------S--SGGGBHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred -------------cCCCCc------------------------c--ccCCccchhHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 223320 0 1223 68999999999999999999999998 5
Q ss_pred cHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 005783 340 DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRL 419 (677)
Q Consensus 340 ~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra 419 (677)
.+++.++++++....+|+..+..... +-.+|+|..+++.|.++++||++|.||+.+++||+.+|. .+.++++++++
T Consensus 412 ~l~~~ld~~~~~~d~~GL~~~~~G~W-~~~dW~d~~~~~~G~~~~~~a~~y~al~~~a~lA~~lG~---~~~A~~y~~~A 487 (739)
T 3cih_A 412 RMQTMMDYVLGRTNKNGMVEGMSGDW-VFVDWADGYLDKKGELSFEQVLFCRSLETMALCADLVGD---KDGQQKYEKLA 487 (739)
T ss_dssp HHHHHHHHHHTTBCTTSCBCCCTTCB-CCSCCCTTCCCCSSEEHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcccCCCCc-ccCCCcccccCCCCcchHHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHH
Confidence 55555555444333344332211000 124788876788999999999999999999999999974 66788899999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhh
Q 005783 420 SALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWS 499 (677)
Q Consensus 420 ~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LA 499 (677)
++||+.|+++||+++++.| ..+..+....|. ....+|++|
T Consensus 488 ~~lk~a~~~~~wd~~~G~y---------------------------------------~~~~~~G~~~d~-~~~~s~~la 527 (739)
T 3cih_A 488 SALKAKLEPTFWNNQKQAF---------------------------------------VHNCVDGRQSDA-VTRYANMFS 527 (739)
T ss_dssp HHHHHHHHHHHEETTTTEE---------------------------------------CSEEETTEECSC-CCHHHHHHH
T ss_pred HHHHHHHHHhccCcccCee---------------------------------------EeecCCCCcCcc-cchHHhHHH
Confidence 9999999999998765432 111111111111 123367889
Q ss_pred hhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCC
Q 005783 500 IVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGR 579 (677)
Q Consensus 500 l~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~ 579 (677)
+++|++++++++++++.+... + ..||+| |||+.++++.|+.++|+
T Consensus 528 L~~Gl~~~e~~~~v~~~L~~~--------------~-------------------~~~~~~--tp~~~~~~~~aL~~~G~ 572 (739)
T 3cih_A 528 VFFDYLNADKQQAIKQSVLLN--------------D-------------------EILKIT--TPYMRFYELEALCALGE 572 (739)
T ss_dssp HHTTCSCHHHHHHHHHHTTTC--------------T-------------------TSCCCC--SHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCHHHHHHHHHHHhcC--------------c-------------------cccccc--chhHHHHHHHHHHHcCC
Confidence 999999999998888765431 1 125666 69999999999999999
Q ss_pred hHHHHHHHHH-HHhhCC--CCCCCccccCCCCC---c--c----CCCCCccchHhHHH-HHHHHHHhc-CCCc
Q 005783 580 LGLAQKAVAL-AENRLP--LDHWPEYYDTRTGR---F--T----GKQSRLFQTWTIAG-FLTSKMLVE-NPEM 638 (677)
Q Consensus 580 ~~~A~~ll~~-a~~~l~--~~~~pE~FDG~tg~---p--~----G~~ac~~QAWSaA~-~L~a~~lL~-~p~~ 638 (677)
.++|.+++.. ....+. ...++|.||+.... + . +...|. +|+++. ..+...++. .|..
T Consensus 573 ~d~A~~ll~~~w~~~v~~Gattl~E~~~~~~~~~~~~~~~g~~~~~s~~H--aW~ag~~~~l~~~ilGI~p~~ 643 (739)
T 3cih_A 573 QETVMKEMKAYWGGMLKAGATSFWEKYNPEESGTQHLAMYGRPYGKSLCH--AWGASPIYLLGKYYLGVKPTK 643 (739)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSSCCSCCCTTCCGGGGGCBTTBTTCSCSSB--GGGCTHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCceeEEecccccCCcccccccccccCccccc--ccccchHHHHHHHHhccCcCC
Confidence 9999998864 233333 34799999986321 1 1 222344 899874 444445554 5543
No 9
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.88 E-value=5.9e-21 Score=227.98 Aligned_cols=349 Identities=16% Similarity=0.115 Sum_probs=221.7
Q ss_pred cchHHHHHHHHHHHHhHhhhccccceeeeccCCCC-------CCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHH
Q 005783 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGD-------KQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTL 259 (677)
Q Consensus 187 ~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~-------a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~ 259 (677)
+.++++.+++..|+.+. +.-++++++|++...- ....+|..+|+||+.+++.+++..|.+++++.+|.+++
T Consensus 281 ~~~~~~~rSl~~Lk~l~--~~~t~GaiiAS~t~p~~e~~gg~rn~dgYry~W~RDaa~t~~all~~G~~e~A~~~l~~L~ 358 (1020)
T 1ulv_A 281 ALRTQYDVSLMTVKSHE--DKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLF 358 (1020)
T ss_dssp HHHHHHHHHHHHHHTTB--CSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--CCCCCCeEEEeCCCCcccccCCccCCCCCceEccchHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34566666666665532 2223688888854321 01225999999999999999998899999999999999
Q ss_pred hhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCccc--CCCcHHHHHHHHHHHHHHhCChhHHh
Q 005783 260 QLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVA--PVDSGLWWIILLRAYGKITGDYALQE 337 (677)
Q Consensus 260 ~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~yg--sVDAtLWfIial~~Y~~~TGD~~fl~ 337 (677)
.+|.. .+|.++..+.+ + |+ + +++ ..|.+.++++++++|.+ + |.++..
T Consensus 359 ~~Q~~---------~~G~~~~~y~i----------------~-G~-~--~w~~~Q~D~~g~~l~~~~~~~~-~-d~~~w~ 407 (1020)
T 1ulv_A 359 TYQQQ---------PDGHFPQTSRV----------------D-GT-I--GQNGIQLDETAFPILLANQIGR-T-DAGFYR 407 (1020)
T ss_dssp HHTCC---------TTSCCCSCBCT----------------T-SC-B--CCCCCBTHHHHHHHHHHHHHTC-C-CHHHHH
T ss_pred HHhcC---------CCCCeeeEEec----------------C-CC-c--CCCCccCccchHHHHHHHHHHh-c-CHHHHH
Confidence 88852 25666665521 1 22 1 122 77999999999999976 4 533332
Q ss_pred hhcHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Q 005783 338 RVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINN 417 (677)
Q Consensus 338 ~~~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ 417 (677)
+ .++++++++.++-.. ++-..|-++ .|+-..+.++.|.||+++++||+.++ +.+.++++++
T Consensus 408 ~-~v~~al~~i~~~g~~-----------~~~~~WEe~----~g~~~~t~~~~~~AL~~aa~lA~~~G---~~~~a~~w~~ 468 (1020)
T 1ulv_A 408 N-ELKPAADYLVAAGPK-----------TPQERWEET----GGYSTSTLASQIAALAAAADIAGKNG---DAGSAAVYRA 468 (1020)
T ss_dssp H-THHHHHHHHHHHCSC-----------BSBCTTSSC----CBEEHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred H-HHHHHHHHHHHhCCC-----------CChhhhccc----CCcCHHHHHHHHHHHHHHHHHHHHcC---ChhHHHHHHH
Confidence 1 466777777665211 222235443 35668999999999999999999997 4677888999
Q ss_pred HHHHHHHHHHHhhhhhh-----hhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccc
Q 005783 418 RLSALSFHIREYYWVDM-----KKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFF 492 (677)
Q Consensus 418 ra~~Lk~~f~~~FW~d~-----~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~d 492 (677)
.+.+|++.|+++||+++ ++.| .|..++. ++. . -..-++.+.+..+. .+..+|
T Consensus 469 ~Ad~i~~~i~~~~w~~~g~~~~~g~f--~r~~~dg------~~~-----~---~~~~~~~n~~~~~~-------~~~~lD 525 (1020)
T 1ulv_A 469 TADEWQRSTEKWMFTTNGPVGDGKYY--LRISATG------NPN-----D---GATRDWGNGAGVHP-------ENAVLD 525 (1020)
T ss_dssp HHHHHHHTHHHHHEESSCSSTTSCEE--CSEESSS------CTT-----S---CCEEECSTTCCEEE-------GGGCCB
T ss_pred HHHHHHHHHHHhCCCCcccccccCee--EEEecCC------Ccc-----c---ccccccccccccCC-------CCCeee
Confidence 99999999999999976 3322 1100000 000 0 00001111110000 111133
Q ss_pred cccchh-hhhcCCCCH--HHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccc---c-------
Q 005783 493 TLGNLW-SIVSSLGTP--KQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYH---N------- 559 (677)
Q Consensus 493 slGN~L-Al~~gll~~--eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYH---N------- 559 (677)
++++ .+.+|++++ ++....++.|++ .|...+ | .|| .-.+|++.+|| |
T Consensus 526 --as~l~l~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~------~----~G~-----~~~RY~~D~Y~~~~dG~~~~~~ 585 (1020)
T 1ulv_A 526 --GGFLEFVRLGVKAPADPYVADSLAETDA---SISQET------P----GGR-----MWHRYTYDGYGEKADGSPWDGT 585 (1020)
T ss_dssp --GGGGHHHHTTSSCTTCHHHHHHHHHHHH---HHEEEE------T----TEE-----EECSBTTCCCSCCTTSCCCSSC
T ss_pred --HHHHHHHHhCCCCCCcHHHHHHHHHHHH---HhcccC------C----CCc-----eeecCCccccccccCCCcccCC
Confidence 2333 336898655 477778888876 443211 1 111 11234444555 2
Q ss_pred --CCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhhC-CCCCCCccccC---------CCCCccCCCCCccchHhHHHHH
Q 005783 560 --GGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRL-PLDHWPEYYDT---------RTGRFTGKQSRLFQTWTIAGFL 627 (677)
Q Consensus 560 --GgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~l-~~~~~pE~FDG---------~tg~p~G~~ac~~QAWSaA~~L 627 (677)
|++||....-++.++++.|+ +|.++++.+...- ..+.+||.||. .+|+|.| +|.|||||+|++|
T Consensus 586 g~g~~W~l~T~wlae~~~~~G~--~A~~~~~~l~~~a~~~GllpEq~~~g~~~~~~~~~tG~p~~--g~~PqaWSha~~I 661 (1020)
T 1ulv_A 586 GIGRLWPLLSGERGEYALANGQ--DALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTG--SASPLSWAMAQYV 661 (1020)
T ss_dssp CCCCBCTHHHHHHHHHHHHTTC--CCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBCS--SCBSCHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHhhH--HHHHHHHHHHHhccccCCcceeecccccccccCCcCCcccc--CCcHHHHHHHHHH
Confidence 78999886666889888887 7888887755443 35789999996 4556651 4559999999999
Q ss_pred HHHHHhc
Q 005783 628 TSKMLVE 634 (677)
Q Consensus 628 ~a~~lL~ 634 (677)
.+.+.+.
T Consensus 662 ~~~~~l~ 668 (1020)
T 1ulv_A 662 RLAAGVK 668 (1020)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8877665
No 10
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.85 E-value=1.2e-19 Score=208.99 Aligned_cols=351 Identities=14% Similarity=0.070 Sum_probs=220.1
Q ss_pred CcchHHHHHHHHHHHHhHhhhcccc-ceeeeccCCC----C--CCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHH
Q 005783 186 REETEIEKEAWRLLQEAVVTYCESP-IGTVAANDPG----D--KQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHT 258 (677)
Q Consensus 186 ~~~~~~~~~A~~lLr~~~~~~~~~p-~G~iAa~~~~----~--a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l 258 (677)
...+.++.+++..|+.+. + .+| ++++|++... . .....|..+|+||+.+++.+++..|+++.++.+|.++
T Consensus 292 ~~~~~~~~rs~~~Lk~l~--~-~~~~G~iiAs~t~~~~e~~~~~~~~dY~~~W~RD~~~~~~al~~~G~~~~a~~~l~~l 368 (684)
T 1lf6_A 292 GKANSLYYNSMMILKASE--D-KTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYL 368 (684)
T ss_dssp TTCCHHHHHHHHHHHTTB--C-SSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcc--C-CCCCccEEeecCCCCccccCCCCCCCCEEEeccHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345666666666665532 1 133 4445664211 0 1234789999999999999999889999999999999
Q ss_pred HhhccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh
Q 005783 259 LQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER 338 (677)
Q Consensus 259 ~~lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~ 338 (677)
+..|..++ .++..+.+ +|+ |..|. ...|++.+++++++.| ..+| +.
T Consensus 369 ~~~q~~~G----------~~~~~~~~--------~G~----p~w~~------~Q~D~~g~~l~~~~~~-~~~g---~~-- 414 (684)
T 1lf6_A 369 AKVVKDNG----------MIPQNTWI--------SGK----PYWTG------IQLDEQADPIILSYRL-KRYD---LY-- 414 (684)
T ss_dssp HHHHHHHS----------SCCSCBCT--------TSC----BCCCC------CCHHHHHHHHHHHHHT-TCGG---GT--
T ss_pred HhhcCCCC----------CcccceeC--------CCC----cccCC------ccccchHHHHHHHHHH-HHcC---ch--
Confidence 98886543 23332210 011 11111 2489999999999855 4455 22
Q ss_pred hc-HHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Q 005783 339 VD-VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINN 417 (677)
Q Consensus 339 ~~-vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ 417 (677)
+. ++++++++++.....+ ...|-++ .|.-..+.++.|.||+++++||+.++ +.+.++.+.+
T Consensus 415 ~~~v~~al~~i~~~~~~~~-----------~g~WE~~----~g~~~~t~~~~~~aL~~~a~lA~~~g---~~~~a~~~~~ 476 (684)
T 1lf6_A 415 DSLVKPLADFIIKIGPKTG-----------QERWEEI----GGYSPATMAAEVAGLTCAAYIAEQNK---DYESAQKYQE 476 (684)
T ss_dssp TTTHHHHHHHHHHHCSSBS-----------SCTTSSC----CBBCHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCC-----------ccccccc----CCcCHHHHHHHHHHHHHHHHHHHHcC---ChHHHHHHHH
Confidence 34 7888888887632222 2235443 34558899999999999999999987 4677888999
Q ss_pred HHHHHHHHHHHhhhhhh-----hhhhhhhhccccccchhhhcccCCCCCCccccccccccCCC---C--eeeccccCC-c
Q 005783 418 RLSALSFHIREYYWVDM-----KKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEG---G--YLIGNLQPA-H 486 (677)
Q Consensus 418 ra~~Lk~~f~~~FW~d~-----~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~g---g--Yl~g~v~p~-~ 486 (677)
.+.+|++.|+++||+++ ++.| .| .+.+.+ | +...+-.+. .
T Consensus 477 ~a~~i~~~i~~~~w~~~~~~g~~~~f--~r---------------------------~~~d~~~~~~~~~~~~~~~~~~~ 527 (684)
T 1lf6_A 477 KADNWQKLIDNLTYTENGPLGNGQYY--IR---------------------------IAGLSDPDADFMINIANGGGVYD 527 (684)
T ss_dssp HHHHHHHHHHHHHEESSCSSTTSCEE--CS---------------------------CBSSSCTTSCCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHhccCCCcccccCCee--EE---------------------------EeccCCCccccccccccccccCC
Confidence 99999999999999976 3221 00 000000 0 111110000 0
Q ss_pred cCcccccccchhhhhcCCCCHH--HHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCcc-cc--CC
Q 005783 487 MDFRFFTLGNLWSIVSSLGTPK--QNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSY-HN--GG 561 (677)
Q Consensus 487 ~D~r~dslGN~LAl~~gll~~e--qa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sY-HN--Gg 561 (677)
.+..+|+ +-++++.+|+++++ ++.+.++.|++ +|...+|-...+..+...+|.. +.+-..| |+ |+
T Consensus 528 ~~~~lDa-s~l~~~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G~~~~RY~~d~y~~------~~~G~~f~~~g~g~ 597 (684)
T 1lf6_A 528 QKEIVDP-SFLELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGPSWYRYNHDGYGE------PSKTELYHGAGKGR 597 (684)
T ss_dssp GGGCCCG-GGGHHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEEEECSSTTCCCSC------SBTTBCCSSSSCCC
T ss_pred CCCcEeH-HHhHHHhcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEeccCCCCCCc------ccCCCccccCCCCC
Confidence 1111343 22235689988654 88888888886 4532111000000000011110 0111223 34 79
Q ss_pred CchhhHHHHHHHHHHhCChHHHHHHHHHHHhhC-CCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhc
Q 005783 562 SWPTLLWQFTLACIKMGRLGLAQKAVALAENRL-PLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVE 634 (677)
Q Consensus 562 VWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~l-~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~ 634 (677)
+||.....++.++++.|+ +|.++++.....- ..+.+||.||+.+|+|.|. |.|||||+|++|.+...|.
T Consensus 598 ~W~~~t~~~a~al~~~G~--~A~~~~~~l~~~a~~~gllpE~~~~~~g~~~G~--a~PqaWSha~~i~~~~~l~ 667 (684)
T 1lf6_A 598 LWPLLTGERGMYEIAAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEYVILFASNI 667 (684)
T ss_dssp BBHHHHHHHHHHHHHTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCh--HHHHHHHHHHHhcccCCccCeeecCCCCCCCCC--CcchHHHHHHHHHHHHHHh
Confidence 999998888999999998 7888887654433 3578999999999999974 3499999999998876554
No 11
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=99.67 E-value=1.4e-14 Score=161.43 Aligned_cols=334 Identities=13% Similarity=0.129 Sum_probs=199.7
Q ss_pred cceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCC--------hHHHHHHHHHHHhhccccccccccCCCCCCCCC-
Q 005783 210 PIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGE--------GEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA- 280 (677)
Q Consensus 210 p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~--------pEiar~~L~~l~~lQs~e~~~~~~~~~~G~iP~- 280 (677)
++++||++.+ ..+.|..+|.||+.+++.+++..|. .+.++.++.+.+.+|.... ..|.++.
T Consensus 49 ~GaiIASptt---snpDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~-------~~G~~~~~ 118 (492)
T 2fba_A 49 PGTVIASPST---SNPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSN-------PSGSFDDE 118 (492)
T ss_dssp TTCBCSCSCB---SSSBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCB-------TTBCTTSG
T ss_pred CCeEEEeCCC---CCCCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccC-------CCCCcCcc
Confidence 4666677543 2468999999999999999986676 8999999997666664321 2333332
Q ss_pred cceeccccCCCc-ccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHH---------------h---hhcH
Q 005783 281 SFKVRNVPLESN-KFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQ---------------E---RVDV 341 (677)
Q Consensus 281 sfki~h~e~~~~-~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl---------------~---~~~v 341 (677)
...++- |.+.+ +|+. ..+..|.. ..|.+-+.++++.+|.++..+...+ + .+.+
T Consensus 119 ~~~glg-ep~y~vdG~~-~~~~w~~~------Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (492)
T 2fba_A 119 NHKGLG-EPKFNTDGSA-YTGAWGRP------QNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNII 190 (492)
T ss_dssp GGGGGG-CCEECTTSCB-CCSCCSCC------BTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTH
T ss_pred cccccC-ceeeccCCCc-CCcccCCc------cccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHH
Confidence 110000 00000 0210 01122221 4588888899999887765333221 1 1345
Q ss_pred HHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 005783 342 QTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSA 421 (677)
Q Consensus 342 q~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~ 421 (677)
++.++++.+....++++.|+ .+. |+-....+.-+.||.++++||+.++ +.+.++.+.+.+..
T Consensus 191 ~~~l~~v~~~w~~pd~dlWE------------er~---g~~~~T~~~~~~AL~~aa~lA~~~g---~~~~a~~w~~~ad~ 252 (492)
T 2fba_A 191 KPDLEYVIGYWDSTGFDLWE------------ENQ---GRHFFTSLVQQKALAYAVDIAKSFD---DGDFANTLSSTAST 252 (492)
T ss_dssp HHHHHHHHHHTTSCEECTTS------------CCE---ECCHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCcC------------ccC---CCChHHHHHHHHHHHHHHHHHHHcC---CchHHHHHHHHHHH
Confidence 66666666666667777776 122 3458899999999999999999987 46778888888888
Q ss_pred HHHHHHHh---hhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchh
Q 005783 422 LSFHIREY---YWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLW 498 (677)
Q Consensus 422 Lk~~f~~~---FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~L 498 (677)
+++.|.++ ||.++++.+ .+ .|. .+.+ + .....|. ++|
T Consensus 253 i~~~I~~~~~~~w~~~~~~f--~~----~~~--------------------~~~~-~-------~~~~lDa------s~L 292 (492)
T 2fba_A 253 LESYLSGSDGGFVNTDVNHI--VE----NPD--------------------LLQQ-N-------SRQGLDS------ATY 292 (492)
T ss_dssp HHHHHHSTTTCCEETTTTEE--CS----SHH--------------------HHHT-T-------SCCSCCT------HHH
T ss_pred HHHHHHHhhhcCCCCCCCEE--EE----ecc--------------------cccc-C-------CCCcccH------HHH
Confidence 99999988 997654422 00 000 0000 0 1122332 112
Q ss_pred --hh-hcC-------CC--CHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccc-----cCC
Q 005783 499 --SI-VSS-------LG--TPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYH-----NGG 561 (677)
Q Consensus 499 --Al-~~g-------ll--~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYH-----NGg 561 (677)
++ -++ ++ +.++....++.|++ +|...+|+..--+ ...++ .||..+ .|. .|+
T Consensus 293 l~~~~~f~~~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~~pin~~~~--~g~~v-~RY~~D------~y~g~~~~~g~ 360 (492)
T 2fba_A 293 IGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLE---DNKDRYSVNSAYS--AGAAI-GRYPED------VYNGDGSSEGN 360 (492)
T ss_dssp HHHHHHSCTTSCCCCSCCTTCHHHHHHHHHHHH---HHHHHCGGGTTCS--SCCCC-CSCTTC------CBCSSSBSSCC
T ss_pred HHHHhccccccccCCccCCCCHHHHHHHHHHHH---HHhcccCccccCc--ceeEE-EeCCCC------CCCCCCccCCC
Confidence 11 232 33 33577888888877 5654444321000 00011 122221 232 277
Q ss_pred CchhhHHHHHH----HH----HHhC-------------------------C----------------------hHHHHHH
Q 005783 562 SWPTLLWQFTL----AC----IKMG-------------------------R----------------------LGLAQKA 586 (677)
Q Consensus 562 VWP~l~wl~a~----al----~r~G-------------------------~----------------------~~~A~~l 586 (677)
.|+--..-++. ++ .+.| + .++|..+
T Consensus 361 pw~lcT~w~ae~ly~al~~~~~~~g~~~i~~~~~~f~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~A~~~ 440 (492)
T 2fba_A 361 PWFLATAYAAQVPYKLAYDAKSASNDITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSF 440 (492)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHTCCEEEEGGGHHHHHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCceecchhhHHHHHhhhhhhccccccccccccceeccCchhHHHHHHHHHHHHHHH
Confidence 77765333355 33 2444 3 5688888
Q ss_pred HHHHHhhCC-CCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhc
Q 005783 587 VALAENRLP-LDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVE 634 (677)
Q Consensus 587 l~~a~~~l~-~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~ 634 (677)
++.+..+.. .|.+||.||..+|+|.|.. |||||.|++|.+...+.
T Consensus 441 l~~~~~~~~~~GllsEq~d~~tG~~~ga~---PltwSha~li~aa~~~~ 486 (492)
T 2fba_A 441 LQVILDHINDDGSLNEQLNRYTGYSTGAY---SLTWSSGALLEAIRLRN 486 (492)
T ss_dssp HHHHHHHSCTTSCCCSEECTTTCCEESST---TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCccccCCCCCCCCCcc---chHHHHHHHHHHHHHHh
Confidence 887655544 6889999999999999887 99999999999877654
No 12
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=99.64 E-value=2.8e-14 Score=158.18 Aligned_cols=324 Identities=13% Similarity=0.114 Sum_probs=190.6
Q ss_pred cceeeeccCCCCCCCCCCCcccchhhHHHHHHHh---ccCChHHHHHHHHHHHh---hccccccccccCCCCCCCC----
Q 005783 210 PIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFL---LKGEGEIVRNFLLHTLQ---LQSWEKTVDCYSPGQGLMP---- 279 (677)
Q Consensus 210 p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL---~~G~pEiar~~L~~l~~---lQs~e~~~~~~~~~~G~iP---- 279 (677)
++++||++.+ ..+.|..+|.||+.+++.+++ ..|..++++.++.++.. +|.... ..|.++
T Consensus 34 tGaiIASptt---snpDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~~~~-------~~G~l~~~gl 103 (472)
T 1gai_A 34 SGIVVASPST---DNPDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSN-------PSGDLSSGGL 103 (472)
T ss_dssp TTCBCSCSCB---SSSBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCCB-------TTBCTTTTGG
T ss_pred CceEEeeCCC---CCCCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccC-------CCCccccCCC
Confidence 3566777543 246899999999999999998 78998888888777665 553211 133333
Q ss_pred --CcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh---hcHHHHHHHHHHHhhc
Q 005783 280 --ASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLA 354 (677)
Q Consensus 280 --~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~---~~vq~al~~Il~~~~~ 354 (677)
..+. ++ |+ ...++.|..+...+|. .++-..+.+++ +..+|+..++++ +.+++.++++.+....
T Consensus 104 gE~~y~-----vd---G~-~~~~~w~~~Q~D~~g~-ra~~~~~~~~~--l~~~g~~~~~~~~~w~~i~~~l~~v~~~w~~ 171 (472)
T 1gai_A 104 GEPKFN-----VD---ET-AYTGSWGRPQRDGPAL-RATAMIGFGQW--LLDNGYTSAATEIVWPLVRNDLSYVAQYWNQ 171 (472)
T ss_dssp GCCEEC-----TT---SC-BCCSCCSCCCTHHHHH-HHHHHHHHHHH--HHHTTCHHHHHHTHHHHHHHHHHHHHHHTTS
T ss_pred CCceEc-----cC---CC-ccCCcCCCccccccch-hHHHHHHHHHH--HHHcCCccccchhHHHHHHHHHHHHHHhcCC
Confidence 3231 11 22 1112233222222221 11334455554 666888776654 4455666666655556
Q ss_pred CCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhh
Q 005783 355 DGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDM 434 (677)
Q Consensus 355 ~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~ 434 (677)
++++.|+ .+ .|+-....+.-+.||..+++||+.++. . +..+.+.+..++..+ ++||.
T Consensus 172 pd~dlWE------------er---~g~~~~T~~~~~~AL~~aa~lA~~~g~--~---~~~w~~~ad~I~~~i-~~~w~-- 228 (472)
T 1gai_A 172 TGYDLWE------------EV---NGSSFFTIAVQHRALVEGSAFATAVGS--S---CSWCDSQAPQILCYL-QSFWT-- 228 (472)
T ss_dssp CEECTTS------------CC---EEEEHHHHHHHHHHHHHHHHHHHHTTC--C---CHHHHHHHHHHHHHH-GGGBC--
T ss_pred CCCCCCc------------cc---CCCCHHHHHHHHHHHHHHHHHHHHcCC--c---HHHHHHHHHHHHHHH-HhhcC--
Confidence 6677665 12 234588999999999999999999874 2 455667777788888 88885
Q ss_pred hhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCC----------
Q 005783 435 KKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSL---------- 504 (677)
Q Consensus 435 ~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gl---------- 504 (677)
+. +.+ . |. +. +....|. +.+|+...+.
T Consensus 229 -g~--f~~-------------------~--------------~~-~~-~~~~lDa-----s~LL~~~~~f~p~~~~~~~~ 265 (472)
T 1gai_A 229 -GS--YIL-------------------A--------------NF-DS-SRSGKDT-----NTLLGSIHTFDPEAGCDDST 265 (472)
T ss_dssp -SS--SBC-------------------S--------------EE-SC-CSCCCCT-----HHHHHHHTTCCTTCCSCTTT
T ss_pred -Cc--eEE-------------------e--------------ec-CC-CCCCcCH-----HHHHhhhccCCccccccccC
Confidence 11 100 0 00 00 0112221 1112221221
Q ss_pred --CCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHH------
Q 005783 505 --GTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIK------ 576 (677)
Q Consensus 505 --l~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r------ 576 (677)
.+.++....++.|++ +|..-||+..--| .+-.+ .=-+|..-.|..|+.|.--.--++.++.+
T Consensus 266 ~~p~Dpr~l~Tl~ai~~---~L~~~y~i~~~~~----~g~g~---~v~RY~~D~y~gg~pw~lcT~wlae~l~~a~~~~~ 335 (472)
T 1gai_A 266 FQPCSPRALANHKEVVD---SFRSIYTLNDGLS----DSEAV---AVGRYPEDSYYNGNPWFLCTLAAAEQLYDALYQWD 335 (472)
T ss_dssp TCTTSHHHHHHHHHHHH---TTTTTCGGGTTCC----TTSCC---CCCSCTTCCGGGSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH---HHHHhcCcCCCCc----Ccccc---eEEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 144677888888876 5543333321000 01000 11123333566688777664444666543
Q ss_pred -----------------------hC----------ChHH-----HHHHHHHHHhhC-CCCCCCccccCCCCCccCCCCCc
Q 005783 577 -----------------------MG----------RLGL-----AQKAVALAENRL-PLDHWPEYYDTRTGRFTGKQSRL 617 (677)
Q Consensus 577 -----------------------~G----------~~~~-----A~~ll~~a~~~l-~~~~~pE~FDG~tg~p~G~~ac~ 617 (677)
.| +.++ |+.+++.+..+. ..|.+||.||..+|+|.|..
T Consensus 336 ~~~~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~e~~~~~~~~~GllsEq~d~~tG~~~gn~--- 412 (472)
T 1gai_A 336 KQGSLEITDVSLDFFKALYSGAATGTYSSSSSTYSSIVSAVKTFADGFVSIVETHAASNGSLSEQFDKSDGDELSAR--- 412 (472)
T ss_dssp HHTEEEECTTTHHHHHHHCTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCSEECTTTCCEESSS---
T ss_pred ccCceeecchhHHHHHhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHCCCCCCcccccCCCCCCCCCcc---
Confidence 34 3444 777887655544 46889999999999999877
Q ss_pred cchHhHHHHHHHHHHhc
Q 005783 618 FQTWTIAGFLTSKMLVE 634 (677)
Q Consensus 618 ~QAWSaA~~L~a~~lL~ 634 (677)
|||||++++|.+...+.
T Consensus 413 PlawSha~lI~aa~~l~ 429 (472)
T 1gai_A 413 DLTWSYAALLTANNRRN 429 (472)
T ss_dssp SCHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHh
Confidence 99999999999988886
No 13
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=99.63 E-value=6.4e-14 Score=159.37 Aligned_cols=351 Identities=13% Similarity=0.103 Sum_probs=200.3
Q ss_pred cceeeeccCCCCCCCCCCCcccchhhHHHHHHHh----ccCChHHHHHHHHHHH---hhccccccccccCCCCCCCCCc-
Q 005783 210 PIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFL----LKGEGEIVRNFLLHTL---QLQSWEKTVDCYSPGQGLMPAS- 281 (677)
Q Consensus 210 p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL----~~G~pEiar~~L~~l~---~lQs~e~~~~~~~~~~G~iP~s- 281 (677)
++++||++.+ ..+.|..+|.||+.+++.+++ ..|..+.++.++.++. .+|.+-. ..|-.|..
T Consensus 33 tGaiIAsptt---s~pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~~~lQ~~y~-------~~G~~~~~~ 102 (599)
T 2vn4_A 33 AGAVIASPST---IDPDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQVTLQGLSN-------PSGSLADGS 102 (599)
T ss_dssp TTCBCSCSCC---SSSCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHHHHHHHCCB-------TTBCSTTSG
T ss_pred CceEEEECCC---CCCCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccceeeeeC-------CCCCccccc
Confidence 3556677543 357899999999999999998 8899999999999886 4774321 23333211
Q ss_pred ----ceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh---hcHHHHHHHHHHHhhc
Q 005783 282 ----FKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLA 354 (677)
Q Consensus 282 ----fki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~---~~vq~al~~Il~~~~~ 354 (677)
-+ . .++ |+.. .+..|..+...+|. +++-..+.+++ +..+|+.+++++ +.+++.++++.+....
T Consensus 103 ~l~E~~-~--~ld---G~~~-~~~w~~~Q~D~~gl-r~~~~~~~~~~--~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~ 172 (599)
T 2vn4_A 103 GLGEPK-F--ELT---LKPF-TGNWGRPQRDGPAL-RAIALIGYSKW--LINNNYQSTVSNVIWPIVRNDLNYVAQYWNQ 172 (599)
T ss_dssp GGGCCE-E--CTT---SCBC-CSCCSCCCTHHHHH-HHHHHHHHHHH--HHHTTCHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred CcCceE-E--ecC---Cccc-cCcCCCeeccccch-hHHHHHHHHHH--HHHhCCcccccHHHHHHHHHHHHHHHHhCCC
Confidence 01 0 111 2110 11223222222221 22445455554 567899887764 4566666666666656
Q ss_pred CCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhh
Q 005783 355 DGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDM 434 (677)
Q Consensus 355 ~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~ 434 (677)
++++.|+ .+ .|+-....+.-+.||.++++||+.++. . +..+.+.+..++..+ ++||.++
T Consensus 173 ~d~dlWE------------er---~g~~~~T~~~~~~aL~~aa~lA~~~g~--~---~~~w~~~ad~i~~~i-~~~w~~~ 231 (599)
T 2vn4_A 173 TGFDLWE------------EV---NGSSFFTVANQHRALVEGATLAATLGQ--S---GSAYSSVAPQVLCFL-QRFWVSS 231 (599)
T ss_dssp CEECTTS------------CC---EEEEHHHHHHHHHHHHHHHHHHHHHTC--C---CHHHHHHHHHHHHHH-GGGEETT
T ss_pred CCCCeee------------ec---CCcchHHHHHHHHHHHHHHHHHHHcCC--C---HHHHHHHHHHHHHHH-HhhcCCC
Confidence 6676665 11 234478999999999999999999874 2 455666777788888 8899865
Q ss_pred hhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCC----------
Q 005783 435 KKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSL---------- 504 (677)
Q Consensus 435 ~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gl---------- 504 (677)
+.| .+. |..++-.....| + ..+|+...+.
T Consensus 232 -g~f--~~~---------------------------------~~~~~~~~~~lD----a-s~LL~~~~~f~~~~~~~~~~ 270 (599)
T 2vn4_A 232 -GGY--VDS---------------------------------NINTNEGRTGKD----V-NSVLTSIHTFDPNLGCDAGT 270 (599)
T ss_dssp -TTE--ECS---------------------------------EESSCCCCCCCB----T-HHHHHHHHSCCGGGTTCTTT
T ss_pred -CCE--EEE---------------------------------ecCccCCCCCcC----H-HHHhhhhccCCccccccccC
Confidence 321 010 000000011222 2 1112222221
Q ss_pred --CCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHH------
Q 005783 505 --GTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIK------ 576 (677)
Q Consensus 505 --l~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r------ 576 (677)
.+.++....++.|++ +|..-||+..-.| .+-.+ .--+|..-.|..|+.|.--.--++.+|.+
T Consensus 271 ~~p~dpr~l~Tl~ai~~---~L~~~y~i~~g~~----~g~~~---~v~RY~~D~y~Gg~pw~lcT~w~ae~l~~a~~~~~ 340 (599)
T 2vn4_A 271 FQPCSDKALSNLKVVVD---SFRSIYGVNKGIP----AGAAV---AIGRYAEDVYYNGNPWYLATFAAAEQLYDAIYVWK 340 (599)
T ss_dssp TCTTSHHHHHHHHHHHH---HHHTTCGGGTTCC----TTSCC---CCCSBTTCCGGGCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH---HHHhhcCcCCCCc----CCcee---EEEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 144677888888877 5543333221000 01000 11123333455577665553333554332
Q ss_pred -----------------------hCCh---------------HHHHHHHHHHHhhC-CCCCCCccccCCCCCccCCCCCc
Q 005783 577 -----------------------MGRL---------------GLAQKAVALAENRL-PLDHWPEYYDTRTGRFTGKQSRL 617 (677)
Q Consensus 577 -----------------------~G~~---------------~~A~~ll~~a~~~l-~~~~~pE~FDG~tg~p~G~~ac~ 617 (677)
.|.. +.|+.+++.+..+- ..|.+||.||..+|+|.|..
T Consensus 341 ~~g~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~a~~~GllsEqvd~~~G~~~gn~--- 417 (599)
T 2vn4_A 341 KTGSITVTATSLAFFQELVPGVTAGTYSSSSSTFTNIINAVSTYADGFLSEAAKYVPADGSLAEQFDRNSGTPLSAL--- 417 (599)
T ss_dssp HHTEEEECTTTHHHHHHHSTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCCSEECTTTCCEESSS---
T ss_pred ccCceeeccchhHHHhhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCccCCcc---
Confidence 3422 23777777655544 36789999999999999877
Q ss_pred cchHhHHHHHHHHHHhcCCCcCccccccccHHHHhHhhhhc
Q 005783 618 FQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCAL 658 (677)
Q Consensus 618 ~QAWSaA~~L~a~~lL~~p~~~~~~~~~~~~~~~~~~~~~~ 658 (677)
|||||+|++|.+...+..--.+ +|.+.-.-.-+..|+.
T Consensus 418 PlawSha~lI~a~~~~~~~v~~---~~g~~~~~~~~~~~~~ 455 (599)
T 2vn4_A 418 HLTWSYASFLTATARRAGIVPP---SWANSSASTIPSTCSG 455 (599)
T ss_dssp SCHHHHHHHHHHHHHHTTCCCC---CCCCGGGGCCCSSCCC
T ss_pred hHHHHHHHHHHHHHHHhcCCCC---CcccCCCccCCCcccC
Confidence 9999999999998887532222 2544433333445644
No 14
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.43 E-value=3.7e-12 Score=140.51 Aligned_cols=364 Identities=13% Similarity=0.090 Sum_probs=226.9
Q ss_pred CCcchHHHHHHHH-HHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHH--hccCChHHHHHHHHHHHhh
Q 005783 185 KREETEIEKEAWR-LLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQL 261 (677)
Q Consensus 185 ~~~~~~~~~~A~~-lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lgl--L~~G~pEiar~~L~~l~~l 261 (677)
+++...|++.+.- -|. ..|.+.+.|.-+|..+|- +.-|-||+.-=+.-. |+..++++ +..++-+...
T Consensus 69 d~~l~~lF~n~fpnTld-Ttv~~~~~~~tfViTGDI--------~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~i~r 138 (489)
T 2p0v_A 69 NAKLAWMFENCFPNTLD-TTVHFDGKEDTFVYTGDI--------HAMWLRDSGAQVWPYVQLANKDPEL-KKMLAGVINR 138 (489)
T ss_dssp CHHHHHHHHHHTTHHHH-HTEEECSSSCEEECCBSS--------SSEEHHHHHHHSGGGGGGGGGCHHH-HHHHHHHHHH
T ss_pred ChHHHHHHHHhhhhhhh-hheeeCCCCCEEEEeCCc--------cchhhcccHHHHHHHHHHhccCHHH-HHHHHHHHHH
Confidence 4455566666554 232 244556777778877553 278999987655543 35557776 6777788888
Q ss_pred ccccccccccCCCCCCCCC-cceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhc
Q 005783 262 QSWEKTVDCYSPGQGLMPA-SFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD 340 (677)
Q Consensus 262 Qs~e~~~~~~~~~~G~iP~-sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~ 340 (677)
|..-...+.|. +.+-|. .... + .. ....+.|-.-| .-| .+|+.-.+|.++++|++.|||.+|+.+ .
T Consensus 139 q~~~i~~dPYa--NAF~~~~~~~~-~-~~----d~t~~~P~v~E---~Ky-ElDSla~~L~la~~Yy~~TgD~~~f~~-~ 205 (489)
T 2p0v_A 139 QFKCINIDPYA--NAFNMNSEGGE-W-MS----DLTDMKPELHE---RKW-EIDSLCYPIRLAYHYWKTTGDASVFSD-E 205 (489)
T ss_dssp HHHHHHHCTTC--SEECSSSCCCG-G-GG----SSSCCCTTEEE---CCC-CHHHHHHHHHHHHHHHHHHCCCTTSSH-H
T ss_pred HHHHhccCccc--cccCCCCCCCC-C-CC----CCCCCCccccc---ccc-hhhhhHHHHHHHHHHHHHhCCchhhHH-H
Confidence 88877666666 222221 1110 1 00 00011111101 113 799999999999999999999999976 4
Q ss_pred HHHHHHHHHHHhhc----CC-CcccC----------ccc--------ccCCCcccccc----cCCCCCchhhHHHHHHHH
Q 005783 341 VQTGIKLIMNLCLA----DG-FDMFP----------SLL--------VTDGSCMIDRR----MGIHGHPLEIQALFYTAL 393 (677)
Q Consensus 341 vq~al~~Il~~~~~----~g-f~~y~----------~Ll--------~~dG~~WmD~r----~gr~G~pVEIQALwY~AL 393 (677)
..++++.|++++.. ++ ...|. +|. -..|..|--.| --+.|+.+..|++.|.||
T Consensus 206 w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~yg~~ipSN~~a~v~L 285 (489)
T 2p0v_A 206 WLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSL 285 (489)
T ss_dssp HHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchhcCcchHHHHHHHHHH
Confidence 56788888887743 21 11111 110 01122221111 135788999999999999
Q ss_pred HHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccC
Q 005783 394 RCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPE 473 (677)
Q Consensus 394 r~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~ 473 (677)
+.+++|+..++. +.++++++++.++.+++.|.++.|++..+...+|+|..+.|+.
T Consensus 286 ~~aaeia~~v~~--d~~la~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~G~----------------------- 340 (489)
T 2p0v_A 286 RKAAEILNTVNR--KPALAKECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFGN----------------------- 340 (489)
T ss_dssp HHHHHHHHHTSC--CHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC-----------------------
T ss_pred HHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCCCC-----------------------
Confidence 999999999875 6788999999999999999999998753322244443333221
Q ss_pred CCCeeeccccCCccCcccc-cccchhhh-hcCCCCH--HHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCC
Q 005783 474 EGGYLIGNLQPAHMDFRFF-TLGNLWSI-VSSLGTP--KQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSD 549 (677)
Q Consensus 474 ~ggYl~g~v~p~~~D~r~d-slGN~LAl-~~gll~~--eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~ 549 (677)
++ .|| | ..+++|++ .+|.+++ +.-+...+.|++ ++ .||-. ++.+
T Consensus 341 ---~~-------~mD---DanvpSLLslPylG~~~~dDpiy~nTr~~IlS---~~-NPyy~------------~G~~--- 388 (489)
T 2p0v_A 341 ---QL-------LMD---DANVPSLIALPYLGDVKVTDPIYQNTRKFVWS---ED-NPYFF------------KGSA--- 388 (489)
T ss_dssp ---EE-------CCC---CSSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS---TT-STTEE------------ECSS---
T ss_pred ---cc-------cCC---CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHh---hc-CCccc------------cccc---
Confidence 11 122 1 22455655 6776544 577777877776 33 12211 1111
Q ss_pred CCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHH-hhCCCCCCCccccCCCCCccCCCCCccchHhHHHHHH
Q 005783 550 PKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAE-NRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLT 628 (677)
Q Consensus 550 ~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~-~~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~ 628 (677)
..--.+=|-|.-.||...++..| +..++.++++++++.+. .....|-++|-||.+++.+.-. .++||+.++|..
T Consensus 389 -~~GIGspH~~~~~~Wpmsll~~a-lts~d~~E~~~~L~~l~~t~~gtGLmhEs~d~~~~~~~TR---~wFaWanslF~e 463 (489)
T 2p0v_A 389 -GEGIGGPHIGYDMIWPMSIMMKA-FTSQNDAEIKTCIKMLMDTDAGTGFMHESFNKNDPKNFTR---AWFAWQNTLFGE 463 (489)
T ss_dssp -CEEECCTTTCTTEECHHHHHHHH-HTCCCHHHHHHHHHHHHHTSTTSCSCCSEEETTEEEEEEC---SCBHHHHHHHHH
T ss_pred -ccCCCCCCCCCCchHHHHHHHHH-HhcCCHHHHHHHHHHHHhhCCCCCeeeeeECCCCCCcCCC---cccHHHHHHHHH
Confidence 00001225555557777777777 45788999999998754 3456789999999998877644 499999999887
Q ss_pred HHHHh
Q 005783 629 SKMLV 633 (677)
Q Consensus 629 a~~lL 633 (677)
+..-+
T Consensus 464 ~il~l 468 (489)
T 2p0v_A 464 LILKL 468 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76544
No 15
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=99.26 E-value=1.8e-10 Score=126.28 Aligned_cols=342 Identities=13% Similarity=0.105 Sum_probs=216.7
Q ss_pred ccceeeeccCCCCCCCCCCCcccchhhHHHHHHH--hccCChHHHHHHHHHHHhhccccccccccCCCCCCC--CCccee
Q 005783 209 SPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLM--PASFKV 284 (677)
Q Consensus 209 ~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lgl--L~~G~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~i--P~sfki 284 (677)
.|.-+|..+|- ..-|-||+.-=+.-. |+..++++ +..++.+...|..-...+.|. +.+- |++..
T Consensus 75 ~~~tFviTGDI--------~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~rQ~~~i~~dPYa--NAF~~~~~sg~- 142 (463)
T 3p2c_A 75 KPDTFVYTGDI--------HAMWLRDSGAQVWPYVQLANSDPEL-KEMLAGVILRQFKCINIDPYA--NAFNDGAIPDG- 142 (463)
T ss_dssp CEEEEECCBSS--------CSEEHHHHHHHTGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTC--SEECSSCCTTC-
T ss_pred CCCEEEEeCCC--------cchhcccCHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCccc--cccCCCCCCCC-
Confidence 45667776543 378999987655543 45667776 667778888888866555555 1211 22121
Q ss_pred ccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhc-CCCc---cc
Q 005783 285 RNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA-DGFD---MF 360 (677)
Q Consensus 285 ~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~-~gf~---~y 360 (677)
.+ .. ....+.|- -+.+==.+|+--.+|.+.+.|++.|||.+|+.+ ...+|++.|++-+.. .... .|
T Consensus 143 ~~-~~----d~t~~~p~----v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~~q~~~~~s~Y 212 (463)
T 3p2c_A 143 HW-MS----DLTDMKPE----LHERKWEIDSLCYPLRLAYHYWKTTGDASIFNE-EWIQAITNVLKTFKEQQRKDGVGPY 212 (463)
T ss_dssp TT-TT----SBSCCCTT----EEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHHTTCSSSSCSC
T ss_pred cc-cC----CCCCCCCc----EEEEecHhhhhhHHHHHHHHHHHhhCChhhhcH-HHHHHHHHHHHHHHHHhccCCCCCc
Confidence 00 00 00001110 111212799999999999999999999999976 677999999876542 2221 12
Q ss_pred C----------ccc--------ccCCCcccccc----cCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 005783 361 P----------SLL--------VTDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (677)
Q Consensus 361 ~----------~Ll--------~~dG~~WmD~r----~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~r 418 (677)
. +|. -..|..|--=| --..|+.|-.|+++..+|+.+++|+..+++ ++++++++++.
T Consensus 213 ~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~--d~~la~~~~~l 290 (463)
T 3p2c_A 213 KFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNK--KTALSKECKDL 290 (463)
T ss_dssp CCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC--CHHHHHHHHHH
T ss_pred eEeecCCCCCcccCCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhcc--CHHHHHHHHHH
Confidence 1 110 01122221000 014678899999999999999999998864 67899999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchh
Q 005783 419 LSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLW 498 (677)
Q Consensus 419 a~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~L 498 (677)
+..+++.|.+|.+++..+.-.+|+|..+.|+. +.+ ||- -..+++|
T Consensus 291 A~eIr~gI~k~gvv~~p~~G~iyAyEVDG~Gs--------------------------~~l-------mDD--aNvPSLL 335 (463)
T 3p2c_A 291 AQEVETALKKYAVYNHPKYGKIYAFEVDGFGN--------------------------HHL-------MDD--ANVPSLL 335 (463)
T ss_dssp HHHHHHHHHHHSEEEETTTEEEECSEECSSSC--------------------------EEC-------CCC--SSSSCST
T ss_pred HHHHHHHHHHhCEecCCCCceEEEEEEecCCC--------------------------ccC-------CCC--CCchhHH
Confidence 99999999999988654333455554444332 211 220 0235566
Q ss_pred hh-hcCCCCH--HHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHH
Q 005783 499 SI-VSSLGTP--KQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACI 575 (677)
Q Consensus 499 Al-~~gll~~--eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~ 575 (677)
++ .+|.++. +.-+...+.|++ +. . | .++.|....--.+-|.|...||...++..++
T Consensus 336 slPylGf~~~dDpiYqNTrk~IlS---~~-N--------P--------yY~~G~~~~GiG~PH~~~~~~Wpmsll~~~l- 394 (463)
T 3p2c_A 336 AMPYLGDVNVNDPIYQNTRRFVWS---ED-N--------P--------YFFKGKAGEGIGGPHIGYDMVWPMSIMMKAF- 394 (463)
T ss_dssp THHHHTSSCTTCHHHHHHHHHHTS---TT-S--------T--------TEEECSSCEEECCTTTCTTEECHHHHHHHHH-
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHh---cc-C--------C--------ceeccCccccCCCCCCCCCCchHHHHHHHHh-
Confidence 66 6776544 566666666665 22 1 1 1222222222245688888888888887654
Q ss_pred HhCChHHHHHHHHHHHh-hCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHh
Q 005783 576 KMGRLGLAQKAVALAEN-RLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLV 633 (677)
Q Consensus 576 r~G~~~~A~~ll~~a~~-~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL 633 (677)
..++.++++++++.+.+ ....|-++|-||.+++.+. .+.++||+-++|..+..-|
T Consensus 395 Ts~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaNs~F~elil~l 450 (463)
T 3p2c_A 395 TSQNDAEIKTCIKMLMDTDAGTGFMHESFHKDNPKKF---TRAWFAWQNTLFGELILKL 450 (463)
T ss_dssp TCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCBHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcC---CCCchhhhhHHHHHHHHHH
Confidence 46788999999987544 4457889999999887665 4459999999988665544
No 16
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=99.24 E-value=6.3e-10 Score=121.01 Aligned_cols=365 Identities=14% Similarity=0.079 Sum_probs=228.3
Q ss_pred CCcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhH--HHHHHHhccCChHHHHHHHHHHHhhc
Q 005783 185 KREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFV--PSALAFLLKGEGEIVRNFLLHTLQLQ 262 (677)
Q Consensus 185 ~~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~--Is~lglL~~G~pEiar~~L~~l~~lQ 262 (677)
+++...|++.++--==...|.+ +.|.-+|..+|- ..-|-||+. +.....|+..+++++ ..++.+...|
T Consensus 25 d~~l~~lF~n~~pnTldTtv~~-~~~~tFviTGDI--------~AmWLRDS~~Ql~pY~~l~~~d~~l~-~li~G~I~rQ 94 (427)
T 3qt9_A 25 DKKLQELFYNCFINTMDTTVEV-SEGDAFVITGDI--------PAMWLRDSTSQVEHYLPFVKEYPELK-AIFTGLINRQ 94 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHTEEE-ETTEEEECCBSS--------CSEEHHHHHHHTGGGGGGTTTCGGGH-HHHHHHHHHH
T ss_pred CHHHHHHHHHhcccchhheeEe-CCCCEEEEeCCC--------cchhhccCHHHHhhhHHHhccCHHHH-HHHHHHHHHH
Confidence 3455667777665222334455 667778887653 278999998 444444566688766 5777788888
Q ss_pred cccccccccCCCCCCCCC-cceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcH
Q 005783 263 SWEKTVDCYSPGQGLMPA-SFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDV 341 (677)
Q Consensus 263 s~e~~~~~~~~~~G~iP~-sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~v 341 (677)
..-...+.|. +.+-|. +.. .| ..+ .++....-+.+==.+|+--.+|.+.+.|++.|||.+|+.+ ..
T Consensus 95 ~~~i~~dPYa--NAF~~~~~~~-~~-~~d--------~t~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w 161 (427)
T 3qt9_A 95 VKCIFIDPYA--NAFNKEPNGQ-KW-DND--------ITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFNY-DI 161 (427)
T ss_dssp HHHHHHCTTC--SEECSSSCCC-CS-SCC--------BSCCCTTEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCCH-HH
T ss_pred HHHhccCccc--ccCCCCCCCc-Cc-CCC--------CCCCCCceEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HH
Confidence 8766666665 222221 110 00 000 0111111111212799999999999999999999999976 57
Q ss_pred HHHHHHHHHHhhcC-CCc---cc--C--------ccc--------ccCCCcccccc----cCCCCCchhhHHHHHHHHHH
Q 005783 342 QTGIKLIMNLCLAD-GFD---MF--P--------SLL--------VTDGSCMIDRR----MGIHGHPLEIQALFYTALRC 395 (677)
Q Consensus 342 q~al~~Il~~~~~~-gf~---~y--~--------~Ll--------~~dG~~WmD~r----~gr~G~pVEIQALwY~ALr~ 395 (677)
.+|++.|++-+... ... .| . +|. -..|..|--=| --..|+.|-.|+++.-||+.
T Consensus 162 ~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~ 241 (427)
T 3qt9_A 162 KKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRY 241 (427)
T ss_dssp HHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHH
Confidence 78999998754321 110 11 0 110 01222221000 11467889999999999999
Q ss_pred HHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCC
Q 005783 396 SREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEG 475 (677)
Q Consensus 396 aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~g 475 (677)
+++|+..+++ +.++++++.+.+..+++.|.+|..++..+.-.+|+|..+.|+.
T Consensus 242 ~aei~~~l~~--d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~Gs------------------------- 294 (427)
T 3qt9_A 242 ISEIAEKVYK--DEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMGN------------------------- 294 (427)
T ss_dssp HHHHHHHTSC--CHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC-------------------------
T ss_pred HHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC-------------------------
Confidence 9999998854 6789999999999999999999988754444456655544432
Q ss_pred CeeeccccCCccCcccccccchhhh-hcCCCC--HHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCC
Q 005783 476 GYLIGNLQPAHMDFRFFTLGNLWSI-VSSLGT--PKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKN 552 (677)
Q Consensus 476 gYl~g~v~p~~~D~r~dslGN~LAl-~~gll~--~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~ 552 (677)
+++ ||- -..+++|++ .+|.++ .+.-+...+.|++ +. . | .++.|....
T Consensus 295 -~~l-------MDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS---~~-N--------P--------yy~~G~~~~ 344 (427)
T 3qt9_A 295 -YNF-------MDD--ANVPSLLSIPYLEYKGIEDEVYQNTRKFILS---KN-N--------R--------FFFEGKAAK 344 (427)
T ss_dssp -EEC-------CCC--SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS---TT-S--------T--------TEEECSSCE
T ss_pred -ccc-------cCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhc---cc-C--------C--------ceeccCccC
Confidence 211 220 023556666 667654 3555666666665 22 1 1 122222222
Q ss_pred CCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHh-hCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHH
Q 005783 553 TPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAEN-RLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKM 631 (677)
Q Consensus 553 rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~-~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~ 631 (677)
--.+-|.|...||...++..++ ..+..++++++++...+ ....|-++|-||.+++..- .+..+||+-++|--+..
T Consensus 345 GIG~PH~~~~~~Wpmsl~~~~l-Ts~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~elil 420 (427)
T 3qt9_A 345 GIGSPHTPDQYIWHIALSMQGL-TTNNQEEIDQLIKLLKETDAGTGYMHEGFHVDDPTKF---TRDWFAWSNSLFSHFIY 420 (427)
T ss_dssp EECCTTSCTTEEEHHHHHHHHH-TCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---SCSCBHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCchHHHHHHHHh-hcCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCcchhhhHHHHHHHH
Confidence 2345689988888888876665 45778899999987544 4457889999999887544 44599999998776554
Q ss_pred Hh
Q 005783 632 LV 633 (677)
Q Consensus 632 lL 633 (677)
-+
T Consensus 421 ~l 422 (427)
T 3qt9_A 421 EK 422 (427)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 17
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=99.21 E-value=8.8e-10 Score=119.87 Aligned_cols=364 Identities=13% Similarity=0.065 Sum_probs=228.0
Q ss_pred CcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhH--HHHHHHhccCChHHHHHHHHHHHhhcc
Q 005783 186 REETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFV--PSALAFLLKGEGEIVRNFLLHTLQLQS 263 (677)
Q Consensus 186 ~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~--Is~lglL~~G~pEiar~~L~~l~~lQs 263 (677)
++...|++.++--==...|.+.+.+.-+|..+|- ..-|-||+. +.....|+..++++ +..++.+...|.
T Consensus 23 ~~l~~lF~n~~pnTldTtv~~~~~~~tFviTGDI--------~AmWLRDS~~Ql~pY~~l~~~d~~l-~~li~G~I~rQ~ 93 (426)
T 3qry_B 23 PEWVDVFERCYTDTLDNTVEILEDGSTFVLTGDI--------PAMWLRDSTAQLRPYLHVAKRDALL-RQTIAGLVKRQM 93 (426)
T ss_dssp HHHHHHHHHHHHHHHHHSEEECTTSCEEECSSSS--------SEEEHHHHHHHHGGGHHHHTTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhccchhhheeEecCCCCEEEEeCCC--------cchhhccCHHHHHHhHHHhccCHHH-HHHHHHHHHHHH
Confidence 4556677776653223456666777778887653 389999998 55455566678876 667778888888
Q ss_pred ccccccccCCCCCCCCC-cceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhcHH
Q 005783 264 WEKTVDCYSPGQGLMPA-SFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQ 342 (677)
Q Consensus 264 ~e~~~~~~~~~~G~iP~-sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq 342 (677)
.-...+.|. +.+-|. +.. .+.. . . .++....-+.+==.+|+--.+|.+.+.|++.|||.+|+.+ ...
T Consensus 94 ~~i~~dPYa--NAF~~~~~~~-~~~~---~-d----~t~~~~~v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~ 161 (426)
T 3qry_B 94 TLVLKDPYA--NSFNIEENWK-GHHE---T-D----HTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDE-IFV 161 (426)
T ss_dssp HHHHHCTTC--SEEESSSCCC-SSTT---T-E----ESCCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHH
T ss_pred HHhccCccc--ccCCCCCCCC-CccC---C-C----CCCCCCeeEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHH
Confidence 776666665 221111 110 0000 0 0 0011110111212799999999999999999999999976 578
Q ss_pred HHHHHHHHHhhc-CCCc--ccC----------ccc--------ccCCCcccccc----cCCCCCchhhHHHHHHHHHHHH
Q 005783 343 TGIKLIMNLCLA-DGFD--MFP----------SLL--------VTDGSCMIDRR----MGIHGHPLEIQALFYTALRCSR 397 (677)
Q Consensus 343 ~al~~Il~~~~~-~gf~--~y~----------~Ll--------~~dG~~WmD~r----~gr~G~pVEIQALwY~ALr~aa 397 (677)
+|++.|++-+.. .++. .|. +|. -..|..|--=| --..|+.|-.|+++.-||+.++
T Consensus 162 ~a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~a 241 (426)
T 3qry_B 162 AATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQ 241 (426)
T ss_dssp HHHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHH
Confidence 999999876542 2221 110 110 01222221000 0146788999999999999999
Q ss_pred HHHhh--cCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCC
Q 005783 398 EMLTV--SDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEG 475 (677)
Q Consensus 398 eLa~~--lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~g 475 (677)
+|+.. ..+ ++++++++.+.+..+++.|.+|..++..+.-.+|+|..+.|+..
T Consensus 242 ei~~~~~v~~--d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~Gs~------------------------ 295 (426)
T 3qry_B 242 EIFAALNLAD--SQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGNA------------------------ 295 (426)
T ss_dssp HHHHHHTCTT--HHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSSCB------------------------
T ss_pred HHHHhccccC--cHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCCc------------------------
Confidence 99984 422 57889999999999999999999887654445566555544331
Q ss_pred CeeeccccCCccCcccccccchhhh-hcCCCC--HHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCC
Q 005783 476 GYLIGNLQPAHMDFRFFTLGNLWSI-VSSLGT--PKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKN 552 (677)
Q Consensus 476 gYl~g~v~p~~~D~r~dslGN~LAl-~~gll~--~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~ 552 (677)
+ -||- -..+++|++ .+|.++ .+.-+...+.|++ +. . | .++.|....
T Consensus 296 --~-------lmDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS---~~-N--------P--------yy~~G~~~~ 344 (426)
T 3qry_B 296 --S-------IMDD--PNVPSLLAAPYLGYCSVDDEVYQATRRTILS---SE-N--------P--------YFYQGEYAS 344 (426)
T ss_dssp --C-------CCCC--SSSSCSTTTTTTTSSCTTCHHHHHHHHHHTS---TT-S--------T--------TEEECSSCE
T ss_pred --c-------ccCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhc---cc-C--------C--------ceeccCccC
Confidence 1 1220 023556666 567644 3555666666665 22 1 1 122222222
Q ss_pred CCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHh-hCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHH
Q 005783 553 TPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAEN-RLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKM 631 (677)
Q Consensus 553 rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~-~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~ 631 (677)
--.+-|.|...||...++..++- .++.++++++++...+ ....|-++|-||.+++..- .+..+||+-++|--+..
T Consensus 345 GiG~PH~~~~~~Wpmsl~~~~lT-s~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~elil 420 (426)
T 3qry_B 345 GLGSSHTFYRYIWPIALSIQGLT-TRDKAEKKFLLDQLVACDGGTGVMHESFHVDDPTLY---SREWFSWANMMFCELVL 420 (426)
T ss_dssp EECCTTSCTTEECHHHHHHHHHT-CSCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCchHHHHHHHHHh-CCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCchhhhhHHHHHHHH
Confidence 22456888888888888877653 4678889999877544 3457889999999876544 34599999998776544
No 18
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=96.30 E-value=0.16 Score=59.39 Aligned_cols=79 Identities=11% Similarity=0.017 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHhCChhHHhh---hcHHHHHHHHHHHhhcC-CCccc--CcccccCCCcccccccCCCCCchhhHHHH
Q 005783 316 GLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLAD-GFDMF--PSLLVTDGSCMIDRRMGIHGHPLEIQALF 389 (677)
Q Consensus 316 tLWfIial~~Y~~~TGD~~fl~~---~~vq~al~~Il~~~~~~-gf~~y--~~Ll~~dG~~WmD~r~gr~G~pVEIQALw 389 (677)
+.|...++++|+++|||.+|+++ +-+..+.+...+++..+ .-..| .....||... ...--+.++|+++
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdEy~------e~v~nn~ytn~~a 502 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYE------NNVDNNWDTNMLA 502 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSSTTS------CSBSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHhCChHHHHHHHHHHHHheEEeCCCCEEEEccccCccccc------CCCCCcHHHHHHH
Confidence 58888999999999999999987 33334444434443211 11112 1111122211 0011358999999
Q ss_pred HHHHHHHHHHH
Q 005783 390 YTALRCSREML 400 (677)
Q Consensus 390 Y~ALr~aaeLa 400 (677)
...|+.+.+++
T Consensus 503 ~~~l~~a~~~~ 513 (754)
T 1h54_A 503 QWTLKYTLEIL 513 (754)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999998
No 19
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=95.65 E-value=0.63 Score=54.71 Aligned_cols=99 Identities=10% Similarity=0.084 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHhCChhHHhh---hcHHHHHHHHHHHhhcCC---CcccCcccccCCCccccc--ccCCCCCchhhHH
Q 005783 316 GLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLADG---FDMFPSLLVTDGSCMIDR--RMGIHGHPLEIQA 387 (677)
Q Consensus 316 tLWfIial~~Y~~~TGD~~fl~~---~~vq~al~~Il~~~~~~g---f~~y~~Ll~~dG~~WmD~--r~gr~G~pVEIQA 387 (677)
+.|...++++|+++|||.+|+++ |-+..+.++.++++..+. |...+. ..++.. ...+ .....--+.+.|+
T Consensus 450 ~awla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~-~sPE~~-~~~~g~~~~~~~n~tytn~ 527 (803)
T 2rdy_A 450 GVWLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPS-TSPEQR-FRIGEKGYAVSSATTMDLS 527 (803)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSB-CBTTBC-EEETTEEECCBSCCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCC-Cccccc-ccCCCcccccccChHHHHH
Confidence 57889999999999999999987 444555555555553322 222221 111110 0000 0001113689999
Q ss_pred HHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 005783 388 LFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (677)
Q Consensus 388 LwY~ALr~aaeLa~~lg~~~~~~~a~~~~~r 418 (677)
++...|+.+.++++.++. +.+..+++++.
T Consensus 528 ~~~~~l~~a~~a~~~Lg~--~~~~~~~w~~~ 556 (803)
T 2rdy_A 528 LIAECFDNCIQAAKRLSI--DEDFVKALSDA 556 (803)
T ss_dssp HHHHHHHHHHHHHHHTTC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCc--CHHHHHHHHHH
Confidence 999999999999999875 45555544443
No 20
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=93.45 E-value=1.2 Score=53.20 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=50.6
Q ss_pred cHHHHHHHHHHHHHHhCChhHHhh--hcHHHHHHHHHHHh-hcC-----CCc-ccCcccccCCCcccccccCC-CCCchh
Q 005783 315 SGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLC-LAD-----GFD-MFPSLLVTDGSCMIDRRMGI-HGHPLE 384 (677)
Q Consensus 315 AtLWfIial~~Y~~~TGD~~fl~~--~~vq~al~~Il~~~-~~~-----gf~-~y~~Ll~~dG~~WmD~r~gr-~G~pVE 384 (677)
...|....+++|+++|||.+|+++ |-+..+.++.++++ ..+ +.. ..|. +..+..+. .--+.+
T Consensus 507 ~~aWla~~lweyy~yTgD~~fL~~~yPlLkeaA~F~~d~~l~~~~~~~~G~~vi~ps--------~SPE~~~~~~~~~ty 578 (899)
T 2eab_A 507 AVPWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGSSSGDRLTTGVA--------YSPEQGPLGTDGNTY 578 (899)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCEECCGGGCSSEECSEE--------EETTEEEEEEECCHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhheEecCcCCCCeEEEccc--------cCCCCCCCCCCCcHH
Confidence 467999999999999999999943 44444445545522 111 111 1110 00000111 112578
Q ss_pred hHHHHHHHHHHHHHHHhhcCC
Q 005783 385 IQALFYTALRCSREMLTVSDG 405 (677)
Q Consensus 385 IQALwY~ALr~aaeLa~~lg~ 405 (677)
.|++....|..+.+.++.++.
T Consensus 579 dn~l~~~ll~~~i~aa~~Lg~ 599 (899)
T 2eab_A 579 ESSLVWQMLNDAIEAAKAKGD 599 (899)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999998887753
No 21
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=78.39 E-value=29 Score=36.05 Aligned_cols=94 Identities=7% Similarity=-0.103 Sum_probs=48.9
Q ss_pred HHHHHHHHHH-hCChhHHhhhcHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHH
Q 005783 320 IILLRAYGKI-TGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSRE 398 (677)
Q Consensus 320 Iial~~Y~~~-TGD~~fl~~~~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aae 398 (677)
|+++.+-++. |||..+++- +.++++++++.+..+. ..+-.-+-.||. .......++.||++-.||..+.+
T Consensus 59 i~~~a~a~~~~~~~~~~~~~--A~~~~~~l~~~~~~~~-Gg~~~~~d~dg~------~~~~~~~~~~~af~i~al~~~y~ 129 (388)
T 2gz6_A 59 VWTFSMLCNQLEKRENWLKI--ARNGAKFLAQHGRDDE-GNWYFALTRGGE------PLVQPYNIFSDCFAAMAFSQYAL 129 (388)
T ss_dssp HHHHHHHHHHTCCCHHHHHH--HHHHHHHHHHHSBCTT-SCBCSEECTTSC------BCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHH--HHHHHHHHHHhcCCCC-CCEEEEEcCCCC------cccCCcchHHHHHHHHHHHHHHH
Confidence 4455555566 899888764 4677888877754321 111111112331 11113558899987777755544
Q ss_pred HHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhh
Q 005783 399 MLTVSDGSGSNNLVRAINNRLSALSFHIREYYWV 432 (677)
Q Consensus 399 La~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~ 432 (677)
..+ +++..+ .+.++.+.+.++||.
T Consensus 130 ---~tg---~~~~l~----~A~~~~~~i~~~~~d 153 (388)
T 2gz6_A 130 ---ASG---EEWAKD----VAMQAYNNVLRRKDN 153 (388)
T ss_dssp ---HHC---CHHHHH----HHHHHHHHHHTC---
T ss_pred ---HhC---CHHHHH----HHHHHHHHHHHHhcC
Confidence 344 233333 444466667777774
No 22
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=65.89 E-value=1.4e+02 Score=31.52 Aligned_cols=99 Identities=9% Similarity=0.030 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHH
Q 005783 318 WWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSR 397 (677)
Q Consensus 318 WfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aa 397 (677)
..|.++..-++.+|+..+++. +.++++++.+.+..+.+..+--.+ .||.. . ..-+.++.+|..-.||..+
T Consensus 56 r~i~~~a~a~~~~g~~~~l~~--A~~~~~fl~~~~~d~~~Gg~~~~~-~dG~~-~-----~~~~~lyd~Af~i~al~~~- 125 (402)
T 3gt5_A 56 RFVFNYAMAYLQFGTAEYLDA--VHHGLSYVRDVHRNPATGGYAWTL-CDDRV-E-----DDTNHCYGLAFVMLAYSCG- 125 (402)
T ss_dssp HHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHTTBCTTTSCBCSEE-ETTEE-E-----ECCEEHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhhCChHHHHH--HHHHHHHHHHhCccCCCCcEEEEe-eCCCC-C-----cCCcchHHHHHHHHHHHHH-
Confidence 345566666677899888764 457777777655432222121111 44421 1 1124589999887776663
Q ss_pred HHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 005783 398 EMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKK 436 (677)
Q Consensus 398 eLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~ 436 (677)
+. .++ .+..+ .+.++-+.+.++||.++.+
T Consensus 126 ~~---tgd---~~~l~----~A~~l~~~i~~~f~d~~~G 154 (402)
T 3gt5_A 126 LK---VGI---KQARE----WMDETWCLLERHFWDAEYG 154 (402)
T ss_dssp HH---TTC---TTHHH----HHHHHHHHHHHHTEETTTT
T ss_pred HH---hCC---hhHHH----HHHHHHHHHHHHhcCCcCC
Confidence 22 332 23222 3444667788899976544
No 23
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=49.52 E-value=1.7e+02 Score=33.97 Aligned_cols=140 Identities=12% Similarity=0.054 Sum_probs=77.1
Q ss_pred cchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCCh------HHHHHHHHHHHh
Q 005783 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEG------EIVRNFLLHTLQ 260 (677)
Q Consensus 187 ~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~p------Eiar~~L~~l~~ 260 (677)
..+..++++++-++..+.. .+.|....+- +=..+| |+.+++.++...|.+ +.++..+.++..
T Consensus 353 ~~~~~~~~~l~~l~~~l~~---~~dG~~~q~~-------~gs~vw--dTalal~AL~~ag~~~~~~~~~~l~ka~~~L~~ 420 (732)
T 1w6k_A 353 PASTAFQEHVSRIPDYLWM---GLDGMKMQGT-------NGSQIW--DTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420 (732)
T ss_dssp TTSHHHHHHHHTSGGGEEE---ETTEEEECSS-------SCCHHH--HHHHHHHHHHHTTGGGCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhee---CCCCceeCCC-------CCCchH--HHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHH
Confidence 4566777777777665442 4667654411 114678 999999998765643 367788888888
Q ss_pred hccccc--cc-cccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChh-HH
Q 005783 261 LQSWEK--TV-DCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYA-LQ 336 (677)
Q Consensus 261 lQs~e~--~~-~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~-fl 336 (677)
.|..+. .+ ..|... -|..|. |.... ..+..+|.|..-+.++..+.+..++.. -.
T Consensus 421 ~Q~~~~~~d~~~~~r~~---~~GGW~------------------f~~~~-~~~pd~d~TA~vl~aL~~~~~~~~~~g~~~ 478 (732)
T 1w6k_A 421 SQVPDNPPDYQKYYRQM---RKGGFS------------------FSTLD-CGWIVSDCTAEALKAVLLLQEKCPHVTEHI 478 (732)
T ss_dssp HSCCCCCTTGGGGTCCC---CTTCCB------------------SSCTT-TCCBCHHHHHHHHHHHHHHHHHCTTCCSCC
T ss_pred hcccccCCcccccccCC---CCCeec------------------CCCCC-CCCCccccHHHHHHHHHHHhcccccccchh
Confidence 886541 10 011110 012120 00001 124578999999999988877654210 01
Q ss_pred hhhcHHHHHHHHHHHhhc-CCCccc
Q 005783 337 ERVDVQTGIKLIMNLCLA-DGFDMF 360 (677)
Q Consensus 337 ~~~~vq~al~~Il~~~~~-~gf~~y 360 (677)
.+..++++++|++..=.. .+|..|
T Consensus 479 ~~~~i~~av~wLls~Q~~DGgw~a~ 503 (732)
T 1w6k_A 479 PRERLCDAVAVLLNMRNPDGGFATY 503 (732)
T ss_dssp CHHHHHHHHHHHHTTCCTTSCBCSS
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEee
Confidence 112355677776653222 245444
No 24
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=46.31 E-value=1.6e+02 Score=30.84 Aligned_cols=102 Identities=9% Similarity=-0.039 Sum_probs=56.8
Q ss_pred cCCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhcCCCcccCcccc-cCCCcccccccCCCCCchhhHHHH
Q 005783 311 APVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLV-TDGSCMIDRRMGIHGHPLEIQALF 389 (677)
Q Consensus 311 gsVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~~gf~~y~~Ll~-~dG~~WmD~r~gr~G~pVEIQALw 389 (677)
+++ +.--+++++.++++.|||..+++. .++.++|+.+.+..+.+..+.++-. .+|. ......=.+-||.+
T Consensus 148 nai-sN~~~~~~la~l~~~tgd~~Yl~~--A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~------~~~~~~~tYnqg~~ 218 (349)
T 3k7x_A 148 NTP-VNAPFIILSCWLYNELNETKYLEW--AMKTYEWQTKVLVREDGFVEDGINRLEDGT------IDYEWKFTYNQGVY 218 (349)
T ss_dssp EHH-HHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHBCTTSCBCCEECTTSSSC------BCTTCCCHHHHHHH
T ss_pred chh-hHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHhcCCCCCCeEecCCccCCCCc------cCCcCeeeHHHHHH
Confidence 445 344557778888899999998875 3578888877654333333322111 1110 10011336788875
Q ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhh
Q 005783 390 YTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYW 431 (677)
Q Consensus 390 Y~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW 431 (677)
..| +++|.+..+ ++... +++..|-+.+.++||
T Consensus 219 l~g---~~~LY~~T~---d~~yl----~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 219 IGA---NLELYRITK---EAIYL----DTANKTAAISLKELT 250 (349)
T ss_dssp HHH---HHHHHHHHC---CHHHH----HHHHHHHHHHHHHHE
T ss_pred HHH---HHHHHHhhC---cHHHH----HHHHHHHHHHHHHhc
Confidence 444 445555554 33333 355556666667776
No 25
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=44.77 E-value=1e+02 Score=34.97 Aligned_cols=134 Identities=16% Similarity=0.131 Sum_probs=73.8
Q ss_pred chHHHHHHHHHHHHhHhhhcc---------ccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCCh------HHHH
Q 005783 188 ETEIEKEAWRLLQEAVVTYCE---------SPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEG------EIVR 252 (677)
Q Consensus 188 ~~~~~~~A~~lLr~~~~~~~~---------~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~p------Eiar 252 (677)
.+..+++|++-|++..+.-.+ .|.|. +-. ....+|+.+| ||..++.+++..+.+ +.++
T Consensus 329 ~~~~~~ka~~~L~~~q~~~~g~~~~~~~~~s~GgW-~f~----~~~~~~p~v~--dTA~al~AL~~~~~~~~~~~~~~l~ 401 (631)
T 2sqc_A 329 DHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGF-AFQ----FDNVYYPDVC--DTAVVVWALNTLRLPDERRRRDAMT 401 (631)
T ss_dssp TCHHHHHHHHHHHHTCCCSCCGGGGTCTTSCCCCB-CSS----SSCTTCCBHH--HHHHHHHHHTTCCCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCChhhhcCCCCCCCC-ccc----cCCCCCCchH--HHHHHHHHHHHcCCCccchhHHHHH
Confidence 467899999988886542111 11111 110 0113456665 788888888766653 4677
Q ss_pred HHHHHHHhhccccccccccCCCCC-CCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhC
Q 005783 253 NFLLHTLQLQSWEKTVDCYSPGQG-LMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITG 331 (677)
Q Consensus 253 ~~L~~l~~lQs~e~~~~~~~~~~G-~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TG 331 (677)
..+.+++.+|..++.+..+...++ ..++.. + ..+.|. .-.+.++|.|-.-+.+|... |
T Consensus 402 ~a~~wLls~Q~~dGgf~~~~~~~~~~~~~~~-----~----------F~~~~~--~~d~~~vd~Ta~vl~aL~~~----g 460 (631)
T 2sqc_A 402 KGFRWIVGMQSSNGGWGAYDVDNTSDLPNHI-----P----------FSDFGE--VTDPPSEDVTAHVLECFGSF----G 460 (631)
T ss_dssp HHHHHHHHTCCTTSCBCSSCSSCCCSGGGGS-----T----------TCSSSC--SSCCCBHHHHHHHHHHHHTT----T
T ss_pred HHHHHHHhhcCCCCCCCccCCCCcccccccc-----c----------cccCCc--ccCCCCchHHHHHHHHHHhc----C
Confidence 888999999998877655542221 111100 0 001111 11234688999988888764 2
Q ss_pred ChhHHhhhcHHHHHHHHHHH
Q 005783 332 DYALQERVDVQTGIKLIMNL 351 (677)
Q Consensus 332 D~~fl~~~~vq~al~~Il~~ 351 (677)
+.. .++.++++++++++.
T Consensus 461 ~~~--~~~~i~rai~~L~~~ 478 (631)
T 2sqc_A 461 YDD--AWKVIRRAVEYLKRE 478 (631)
T ss_dssp CCT--TSHHHHHHHHHHHHH
T ss_pred CCc--cHHHHHHHHHHHHHh
Confidence 211 123456777776653
No 26
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=39.26 E-value=2.9e+02 Score=31.91 Aligned_cols=145 Identities=14% Similarity=0.077 Sum_probs=74.1
Q ss_pred CcchHHHHHHHHHHHHhHhhh---------ccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhcc----------C
Q 005783 186 REETEIEKEAWRLLQEAVVTY---------CESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLK----------G 246 (677)
Q Consensus 186 ~~~~~~~~~A~~lLr~~~~~~---------~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~----------G 246 (677)
++....+++|.+-|....+.- +....|-.+..+. ..+|+.++ ||..++.++... -
T Consensus 405 ~~~~~~l~ka~~~L~~~Q~~~~~~d~~~~~r~~~~GGW~f~~~----~~~~pd~d--~TA~vl~aL~~~~~~~~~~g~~~ 478 (732)
T 1w6k_A 405 PEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKGGFSFSTL----DCGWIVSD--CTAEALKAVLLLQEKCPHVTEHI 478 (732)
T ss_dssp GGGHHHHHHHHHHHHHHSCCCCCTTGGGGTCCCCTTCCBSSCT----TTCCBCHH--HHHHHHHHHHHHHHHCTTCCSCC
T ss_pred hhhHHHHHHHHHHHHHhcccccCCcccccccCCCCCeecCCCC----CCCCCccc--cHHHHHHHHHHHhcccccccchh
Confidence 356788999999887754311 1111132233211 12344333 555555554211 2
Q ss_pred ChHHHHHHHHHHHhhccccccccccCCCCCC-CCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHH
Q 005783 247 EGEIVRNFLLHTLQLQSWEKTVDCYSPGQGL-MPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRA 325 (677)
Q Consensus 247 ~pEiar~~L~~l~~lQs~e~~~~~~~~~~G~-iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~ 325 (677)
..+.++..+.+++.+|..++.|..|...++. ..+... + + .-+|...+ .+.++|.|---+.+|..
T Consensus 479 ~~~~i~~av~wLls~Q~~DGgw~a~~~~~~~~~l~~i~----~-----~-----e~fg~~~~-d~s~v~~Ta~vL~aL~~ 543 (732)
T 1w6k_A 479 PRERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLN----P-----S-----EVFGDIMI-DYTYVECTSAVMQALKY 543 (732)
T ss_dssp CHHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGC----C-----C-----SSCSSCSS-CCCBHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEeecCCCchHHHhhCc----c-----h-----hccccccc-CCCcchHHHHHHHHHHH
Confidence 4567889999999999999887666532210 000000 0 0 01333222 23357788888888888
Q ss_pred HHHHhCChh-HHhhhcHHHHHHHHHHH
Q 005783 326 YGKITGDYA-LQERVDVQTGIKLIMNL 351 (677)
Q Consensus 326 Y~~~TGD~~-fl~~~~vq~al~~Il~~ 351 (677)
+.+...+.. -..++.++++++++++.
T Consensus 544 ~~~~~~~~~~~~~~~~i~rAv~yL~~~ 570 (732)
T 1w6k_A 544 FHKRFPEHRAAEIRETLTQGLEFCRRQ 570 (732)
T ss_dssp HHHHCTTSSHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccchhhHHHHHHHHHHHHhh
Confidence 765422210 01123456777776653
No 27
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=38.03 E-value=1.6e+02 Score=30.27 Aligned_cols=99 Identities=10% Similarity=0.055 Sum_probs=52.2
Q ss_pred CCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhc-CCCcccCcccccCCCcccccccCCCCCchhhHHHHHH
Q 005783 313 VDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA-DGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYT 391 (677)
Q Consensus 313 VDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~-~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ 391 (677)
.+.--++|.++.++++.|||..+++. ..+.++.|++.+.. .++.. ..-..+ + +..| .+.++....
T Consensus 114 ~~~~af~i~al~~~y~~tg~~~~l~~--A~~~~~~i~~~~~d~~g~~~------~~~~~~---~-~~~~--~~~~~~~~~ 179 (388)
T 2gz6_A 114 IFSDCFAAMAFSQYALASGEEWAKDV--AMQAYNNVLRRKDNPKGKYT------KTYPGT---R-PMKA--LAVPMILAN 179 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHTC--------------------C---C-CCEE--THHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHhcCCCcccC------cccCCC---C-CCCC--CCHHHHHHH
Confidence 34566789999999999999988864 24555665554421 12111 000001 1 1112 556665444
Q ss_pred HHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 005783 392 ALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMK 435 (677)
Q Consensus 392 ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~ 435 (677)
||.. |.+..+ +. .+.+++..+-+.+.++||.++.
T Consensus 180 all~---l~~~t~---d~----~~~~~A~~~~~~~~~~~~~~~~ 213 (388)
T 2gz6_A 180 LTLE---MEWLLP---QE----TLENVLAATVQEVMGDFLDQEQ 213 (388)
T ss_dssp HHHH---TGGGSC---HH----HHHHHHHHHHHHHHHTTEETTT
T ss_pred HHHH---HHHHcC---CH----HHHHHHHHHHHHHHHHHhccCC
Confidence 4443 344443 22 2444566677788888887554
No 28
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=35.67 E-value=4.4e+02 Score=28.23 Aligned_cols=135 Identities=15% Similarity=0.110 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHh----ccCChHHHHHHHHHHHhhcccccc
Q 005783 192 EKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFL----LKGEGEIVRNFLLHTLQLQSWEKT 267 (677)
Q Consensus 192 ~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL----~~G~pEiar~~L~~l~~lQs~e~~ 267 (677)
.+.+++.-+.++-+|+ ..+|++.+-+.. +.++-..+|. |++..+.++. ..|+++....+..++..+
T Consensus 136 ~~~~~~aA~~L~~r~~-~~~g~iqsw~~~--~~~~~~~~iI-D~~mni~~L~~A~~~~gd~~y~~~A~~ha~~~------ 205 (397)
T 2zzr_A 136 LEATIKAADKLMERYQ-EKGGFIQAWGEL--GYKEHYRLII-DCLLNIQLLFFAYEQTGDEKYRQVAVNHFYAS------ 205 (397)
T ss_dssp HHHHHHHHHHHHTTEE-TTTTEECCSSST--TCGGGCEEET-THHHHTHHHHHHHHHHCCHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHhC-cCCCEEEecccC--CCCCCCceee-chHhHHHHHHHHHHHhCCHHHHHHHHHHHHHH------
Confidence 3344444444455663 335777764321 1122224544 8888776653 457777555444332211
Q ss_pred ccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCC--ccc-CCCc-----HHHHHHHHHHHHHHhCChhHHhhh
Q 005783 268 VDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIG--RVA-PVDS-----GLWWIILLRAYGKITGDYALQERV 339 (677)
Q Consensus 268 ~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~--~yg-sVDA-----tLWfIial~~Y~~~TGD~~fl~~~ 339 (677)
+......+|-.-+.+. .+|..|+...+ .-| .-|+ --|.|.++-+.|++|+|..+++.-
T Consensus 206 l~~~~r~dgs~~h~~~--------------~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A 271 (397)
T 2zzr_A 206 ANNVVRDDSSAFHTFY--------------FDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILF 271 (397)
T ss_dssp HHHTBCTTSCBCSEEE--------------ECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHhCcCCCCCeEEEEE--------------eeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 1111112443333321 12233442110 112 2243 489999999999999999999752
Q ss_pred cHHHHHHHHHHHh
Q 005783 340 DVQTGIKLIMNLC 352 (677)
Q Consensus 340 ~vq~al~~Il~~~ 352 (677)
.+..+.+++.+
T Consensus 272 --~~la~~~l~~~ 282 (397)
T 2zzr_A 272 --KGMTNYFLNRL 282 (397)
T ss_dssp --HHHHHHHHHTC
T ss_pred --HHHHHHHHHhh
Confidence 34445555544
No 29
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=25.48 E-value=5.7e+02 Score=26.37 Aligned_cols=102 Identities=11% Similarity=0.100 Sum_probs=57.4
Q ss_pred CcHHHH----HHHHHHHHHHh---CChhHHhhhcHHHHHHHHHHHhhcC----CCcccCcccccCCCcccccccCCCCCc
Q 005783 314 DSGLWW----IILLRAYGKIT---GDYALQERVDVQTGIKLIMNLCLAD----GFDMFPSLLVTDGSCMIDRRMGIHGHP 382 (677)
Q Consensus 314 DAtLWf----Iial~~Y~~~T---GD~~fl~~~~vq~al~~Il~~~~~~----gf~~y~~Ll~~dG~~WmD~r~gr~G~p 382 (677)
+-.+|+ |+++.+-++.+ |+..+++- +..+++++.+.+..+ ||- +. +-.|| ..+...+-
T Consensus 52 ~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~--A~~~~~fl~~~~~d~~gg~g~~-~s--~d~dg------~~~~~~~~ 120 (402)
T 1fp3_A 52 LKYVWLQGRQVWMYCRLYRKLERFHRPELLDA--AKAGGEFLLRHARVAPPEKKCA-FV--LTRDG------RPVKVQRS 120 (402)
T ss_dssp CEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHH--HHHHHHHHHHHTBSSTTSCCBC-SE--ECTTS------CEEECCSS
T ss_pred ccchhhhHHHHHHHHHHHHHhcccCCHHHHHH--HHHHHHHHHHhccCcCCCCceE-EE--ECCCC------Cccccccc
Confidence 466787 77777666665 99877753 467788877765321 222 11 00122 11222356
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 005783 383 LEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKK 436 (677)
Q Consensus 383 VEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~ 436 (677)
++.||++-.|+..+.+. .+ +.+..+ .+.++-+.+.++||.+..+
T Consensus 121 lyd~af~~~a~~~~~~a---tg---d~~~~~----~A~~l~~~~~~~~~d~~~G 164 (402)
T 1fp3_A 121 IFSECFYTMAMNELWRV---TA---EARYQS----EAVDMMDQIVHWVREDPSG 164 (402)
T ss_dssp SHHHHHHHHHHHHHHHH---HC---CHHHHH----HHHHHHHHHHHHHHTCGGG
T ss_pred hHHHHHHHHHHHHHHHH---hC---CHHHHH----HHHHHHHHHHHHhccCCCc
Confidence 89999988887655443 33 233333 3444556677788744333
No 30
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=24.43 E-value=6.3e+02 Score=26.49 Aligned_cols=103 Identities=9% Similarity=0.021 Sum_probs=51.0
Q ss_pred CCCcHHHHHHHHHHHHHHhCChhHHhhhcHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHH
Q 005783 312 PVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYT 391 (677)
Q Consensus 312 sVDAtLWfIial~~Y~~~TGD~~fl~~~~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ 391 (677)
.++.++- |.++.+-++ +|+...++- +..+++.+.+.+..+. ..++...-...| ..+. .+.+|.||....
T Consensus 50 ~~~nar~-i~~~a~a~~-~g~~~~l~~--A~~~~~fl~~~~~D~~---~GG~~~s~d~dg---~~~~-~k~lyd~Af~i~ 118 (421)
T 2zbl_A 50 LWITARM-LHVYSVAAS-MGRPGAYDL--VDHGIKAMNGALRDKK---YGGWYACVNDQG---VVDA-SKQGYQHFFALL 118 (421)
T ss_dssp HHHHHHH-HHHHHHHHH-TTCTTHHHH--HHHHHHHHTTTTBCTT---TSSBCSEEETTE---EEEC-CEEHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHH-cCChhHHHH--HHHHHHHHHHhccCcC---CCeEEEEeCCCC---CcCC-chhHHHHHHHHH
Confidence 3444443 444444345 898776652 3455666554432111 111110000111 1222 477999999888
Q ss_pred HHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 005783 392 ALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKK 436 (677)
Q Consensus 392 ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~ 436 (677)
|+.. .+. .+. .... +.+.++.+.+.++||.+..+
T Consensus 119 al~~-~~~---tg~---~~~l----~~a~~~~~~l~~~~~d~~~G 152 (421)
T 2zbl_A 119 GAAS-AVT---TGH---PEAR----KLLDYTIEVIEKYFWSEEEQ 152 (421)
T ss_dssp HHHH-HHT---TTC---TTHH----HHHHHHHHHHHHHTEETTTT
T ss_pred HHHH-HHH---hCC---ccHH----HHHHHHHHHHHHHhccCCCC
Confidence 8766 332 332 2222 23334567778889886433
Done!