Your job contains 1 sequence.
>005789
MDTEEAWTPEAEAAAVKEPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATS
INVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALAS
MTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTL
QNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVAS
NLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAA
TFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRT
YKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTS
VASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDV
YALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDV
ENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPE
FVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPSGEGLQCYKKRKPLKNPVDIE
RYPNDAGMAIHPREVIV
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005789
(677 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122388 - symbol:MLH1 "AT4G09140" species:3702... 2515 2.3e-261 1
UNIPROTKB|Q5JN46 - symbol:P0401G10.10 "Os01g0958900 prote... 2222 2.6e-230 1
ZFIN|ZDB-GENE-040426-1600 - symbol:mlh1 "mutL homolog 1, ... 976 4.9e-142 2
UNIPROTKB|E1BQE0 - symbol:MLH1 "Uncharacterized protein" ... 998 8.0e-142 2
MGI|MGI:101938 - symbol:Mlh1 "mutL homolog 1 (E. coli)" s... 971 8.1e-140 2
UNIPROTKB|P40692 - symbol:MLH1 "DNA mismatch repair prote... 984 2.4e-138 2
UNIPROTKB|E2RBM6 - symbol:MLH1 "Uncharacterized protein" ... 968 3.5e-137 2
UNIPROTKB|F1MPG0 - symbol:MLH1 "Uncharacterized protein" ... 960 1.4e-135 2
RGD|620937 - symbol:Mlh1 "mutL homolog 1, colon cancer, n... 952 4.7e-133 2
UNIPROTKB|P97679 - symbol:Mlh1 "DNA mismatch repair prote... 952 4.7e-133 2
UNIPROTKB|A8HM54 - symbol:MLH1 "Mismatch repair protein" ... 943 3.8e-129 2
UNIPROTKB|H0Y818 - symbol:MLH1 "DNA mismatch repair prote... 980 2.7e-124 2
FB|FBgn0011659 - symbol:Mlh1 "Mlh1" species:7227 "Drosoph... 1152 6.2e-117 1
SGD|S000004777 - symbol:MLH1 "Protein required for mismat... 842 2.7e-107 2
UNIPROTKB|E9PCU2 - symbol:MLH1 "DNA mismatch repair prote... 649 5.8e-103 2
CGD|CAL0005779 - symbol:MLH1 species:5476 "Candida albica... 832 1.6e-100 2
ASPGD|ASPL0000056766 - symbol:AN0126 species:162425 "Emer... 950 1.6e-95 1
UNIPROTKB|Q5BH54 - symbol:AN0126.2 "DNA mismatch repair p... 950 1.6e-95 1
DICTYBASE|DDB_G0287393 - symbol:mlh1 "MutL DNA mismatch r... 547 3.4e-88 2
POMBASE|SPBC1703.04 - symbol:mlh1 "MutL family protein Ml... 866 1.3e-86 1
UNIPROTKB|Q7RE54 - symbol:PY05214 "HMLH1 gene product-rel... 492 1.8e-86 3
UNIPROTKB|Q7SA79 - symbol:NCU08309 "Putative uncharacteri... 857 1.1e-85 1
UNIPROTKB|Q755L3 - symbol:AFL199C "AFL199Cp" species:2848... 851 4.9e-85 1
GENEDB_PFALCIPARUM|PF11_0184 - symbol:PF11_0184 "DNA mism... 495 2.6e-82 3
UNIPROTKB|Q8IIJ0 - symbol:PF11_0184 "DNA mismatch repair ... 495 2.6e-82 3
WB|WBGene00003373 - symbol:mlh-1 species:6239 "Caenorhabd... 544 2.0e-69 2
UNIPROTKB|Q9XU10 - symbol:mlh-1 "Protein MLH-1" species:6... 544 2.0e-69 2
UNIPROTKB|B7Z821 - symbol:MLH1 "cDNA FLJ55289, highly sim... 391 1.4e-68 2
UNIPROTKB|I3LT92 - symbol:MLH1 "Uncharacterized protein" ... 694 2.1e-68 1
UNIPROTKB|Q8TTB5 - symbol:mutL "DNA mismatch repair prote... 494 3.7e-50 2
TIGR_CMR|CBU_1083 - symbol:CBU_1083 "DNA mismatch repair ... 514 2.5e-49 1
UNIPROTKB|Q8F6X4 - symbol:mutL "DNA mismatch repair prote... 469 4.7e-48 2
UNIPROTKB|Q74BP0 - symbol:mutL "DNA mismatch repair prote... 496 2.0e-47 1
TIGR_CMR|GSU_2001 - symbol:GSU_2001 "DNA mismatch repair ... 496 2.0e-47 1
UNIPROTKB|P49850 - symbol:mutL "DNA mismatch repair prote... 494 3.3e-47 1
UNIPROTKB|Q8A120 - symbol:mutL "DNA mismatch repair prote... 493 4.2e-47 1
TIGR_CMR|DET_1195 - symbol:DET_1195 "DNA mismatch repair ... 493 4.2e-47 1
TIGR_CMR|CHY_1396 - symbol:CHY_1396 "DNA mismatch repair ... 488 1.4e-46 1
TIGR_CMR|BA_3904 - symbol:BA_3904 "DNA mismatch repair pr... 485 3.0e-46 1
TIGR_CMR|SO_0601 - symbol:SO_0601 "DNA mismatch repair pr... 473 5.6e-45 1
UNIPROTKB|Q89DE6 - symbol:mutL "DNA mismatch repair prote... 460 1.4e-43 1
TIGR_CMR|CPS_0323 - symbol:CPS_0323 "DNA mismatch repair ... 466 4.8e-43 1
UNIPROTKB|Q48P04 - symbol:mutL "DNA mismatch repair prote... 463 1.1e-42 1
UNIPROTKB|A6VD59 - symbol:mutL "DNA mismatch repair prote... 452 2.5e-41 1
TIGR_CMR|VC_0345 - symbol:VC_0345 "DNA mismatch repair pr... 450 9.4e-41 1
UNIPROTKB|P23367 - symbol:mutL species:83333 "Escherichia... 442 2.8e-40 1
TIGR_CMR|NSE_0609 - symbol:NSE_0609 "DNA mismatch repair ... 436 5.5e-39 1
TIGR_CMR|ECH_0884 - symbol:ECH_0884 "DNA mismatch repair ... 423 6.9e-39 2
POMBASE|SPAC19G12.02c - symbol:pms1 "MutL family mismatch... 432 5.5e-38 1
UNIPROTKB|P74925 - symbol:mutL "DNA mismatch repair prote... 410 8.1e-38 1
UNIPROTKB|A9WJ86 - symbol:mutL "DNA mismatch repair prote... 417 7.6e-37 1
TIGR_CMR|SPO_3362 - symbol:SPO_3362 "DNA mismatch repair ... 414 1.7e-36 1
UNIPROTKB|Q9RTR0 - symbol:mutL "DNA mismatch repair prote... 393 8.1e-36 2
TIGR_CMR|APH_0939 - symbol:APH_0939 "DNA mismatch repair ... 398 1.2e-34 2
UNIPROTKB|Q3KLC2 - symbol:mutL "DNA mismatch repair prote... 391 4.7e-34 1
UNIPROTKB|Q69L72 - symbol:OSJNBa0016G10.12 "Os02g0592300 ... 397 8.6e-34 1
UNIPROTKB|F1NQJ2 - symbol:Gga.22468 "Uncharacterized prot... 321 4.3e-33 2
TAIR|locus:2133274 - symbol:PMS1 "POSTMEIOTIC SEGREGATION... 388 8.9e-33 1
UNIPROTKB|F1PNW0 - symbol:PMS2 "Uncharacterized protein" ... 316 9.2e-33 2
UNIPROTKB|F1PNU2 - symbol:PMS2 "Uncharacterized protein" ... 316 1.1e-32 2
ZFIN|ZDB-GENE-030131-686 - symbol:pms2 "PMS2 postmeiotic ... 316 2.3e-32 2
UNIPROTKB|Q1RMN2 - symbol:MLH1 "Uncharacterized protein" ... 358 4.4e-32 1
UNIPROTKB|Q7RPM0 - symbol:PY01438 "DNA mismatch repair pr... 372 5.5e-31 2
GENEDB_PFALCIPARUM|MAL7P1.145 - symbol:MAL7P1.145 "mismat... 382 9.0e-31 3
UNIPROTKB|Q8IBJ3 - symbol:MAL7P1.145 "Mismatch repair pro... 382 9.0e-31 3
UNIPROTKB|O67518 - symbol:mutL "DNA mismatch repair prote... 295 2.8e-30 3
UNIPROTKB|D3ZZF0 - symbol:Pms2 "Protein Pms2" species:101... 330 2.4e-29 2
UNIPROTKB|F1NQJ3 - symbol:Gga.22468 "Uncharacterized prot... 284 5.6e-29 2
UNIPROTKB|F1SN54 - symbol:PMS1 "Uncharacterized protein" ... 353 6.9e-29 1
FB|FBgn0011660 - symbol:Pms2 "Pms2" species:7227 "Drosoph... 294 1.2e-28 2
ASPGD|ASPL0000093218 - symbol:AN11853 species:162425 "Eme... 353 1.2e-28 1
ASPGD|ASPL0000095187 - symbol:AN11854 species:162425 "Eme... 353 1.2e-28 1
UNIPROTKB|Q5AZG4 - symbol:AN6316.2 "ATP-binding protein (... 353 1.2e-28 1
UNIPROTKB|E2RAQ2 - symbol:PMS1 "Uncharacterized protein" ... 349 1.9e-28 1
MGI|MGI:104288 - symbol:Pms2 "postmeiotic segregation inc... 322 2.0e-28 3
UNIPROTKB|P54277 - symbol:PMS1 "PMS1 protein homolog 1" s... 340 2.5e-28 2
ZFIN|ZDB-GENE-030616-528 - symbol:pms1 "PMS1 postmeiotic ... 347 3.0e-28 1
UNIPROTKB|F1MW63 - symbol:PMS1 "Uncharacterized protein" ... 347 3.2e-28 1
UNIPROTKB|D4A651 - symbol:D4A651 "Uncharacterized protein... 344 6.6e-28 1
RGD|1359511 - symbol:Pms1 "postmeiotic segregation increa... 344 6.7e-28 1
UNIPROTKB|Q22B61 - symbol:TTHERM_01109940 "DNA mismatch r... 334 1.6e-27 2
WB|WBGene00004064 - symbol:pms-2 species:6239 "Caenorhabd... 279 1.7e-27 3
UNIPROTKB|G5EFG5 - symbol:pms-2 "Protein PMS-2, isoform a... 279 1.7e-27 3
DICTYBASE|DDB_G0283981 - symbol:pms1 "MutL DNA mismatch r... 329 6.9e-26 2
UNIPROTKB|Q7NL47 - symbol:mutL "DNA mismatch repair prote... 324 7.2e-26 2
UNIPROTKB|F1P0J4 - symbol:PMS1 "Uncharacterized protein" ... 329 2.5e-25 2
UNIPROTKB|Q7SAM1 - symbol:NCU08020 "Putative uncharacteri... 319 3.6e-25 1
UNIPROTKB|E7EUC9 - symbol:MLH1 "DNA mismatch repair prote... 294 4.0e-25 1
UNIPROTKB|E1BA65 - symbol:PMS2 "Uncharacterized protein" ... 317 8.8e-25 2
UNIPROTKB|Q755U7 - symbol:AER421W "AER421Wp" species:2848... 312 2.2e-24 1
UNIPROTKB|F1RFM9 - symbol:PMS2 "Uncharacterized protein" ... 308 5.3e-24 1
SGD|S000005026 - symbol:PMS1 "ATP-binding protein involve... 308 5.6e-24 1
UNIPROTKB|P54278 - symbol:PMS2 "Mismatch repair endonucle... 305 1.2e-23 1
UNIPROTKB|Q3BDU3 - symbol:PMS1 "Rhabdomyosarcoma antigen ... 272 1.7e-23 3
UNIPROTKB|C9JF76 - symbol:PMS1 "PMS1 protein homolog 1" s... 272 9.6e-23 1
ASPGD|ASPL0000042310 - symbol:AN1564 species:162425 "Emer... 263 9.3e-20 3
UNIPROTKB|Q5BD16 - symbol:AN1564.2 "DNA mismatch repair p... 263 9.3e-20 3
UNIPROTKB|Q753U9 - symbol:AFR226C "AFR226Cp" species:2848... 266 1.5e-19 1
UNIPROTKB|E9PC40 - symbol:PMS1 "PMS1 protein homolog 1" s... 238 4.5e-19 1
UNIPROTKB|Q5XG96 - symbol:PMS1 "PMS1 protein homolog 1" s... 238 4.5e-19 1
WARNING: Descriptions of 33 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2122388 [details] [associations]
symbol:MLH1 "AT4G09140" species:3702 "Arabidopsis
thaliana" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0030674 "protein binding, bridging" evidence=ISS]
[GO:0006312 "mitotic recombination" evidence=RCA;IMP] [GO:0009555
"pollen development" evidence=RCA;IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010564
"regulation of cell cycle process" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 Pfam:PF02518
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 EMBL:CP002687
GO:GO:0009555 GO:GO:0016887 GO:GO:0048316 GO:GO:0009845
GO:GO:0006298 GO:GO:0000790 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006312 EMBL:AL161514
GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712
GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
HSSP:P54278 ProtClustDB:CLSN2690816 EMBL:AJ012747 IPI:IPI00541714
PIR:F85092 PIR:T51620 RefSeq:NP_567345.2 UniGene:At.671
ProteinModelPortal:Q9ZRV4 SMR:Q9ZRV4 IntAct:Q9ZRV4 STRING:Q9ZRV4
PRIDE:Q9ZRV4 EnsemblPlants:AT4G09140.1 GeneID:826493
KEGG:ath:AT4G09140 TAIR:At4g09140 InParanoid:Q9ZRV4
PhylomeDB:Q9ZRV4 Genevestigator:Q9ZRV4 Uniprot:Q9ZRV4
Length = 737
Score = 2515 (890.4 bits), Expect = 2.3e-261, P = 2.3e-261
Identities = 486/631 (77%), Positives = 555/631 (87%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RLEESVVNRIAAGEVIQRPVSAVKELVENSLDAD++SI+VVVKDGGLKLIQVSDDGHG
Sbjct: 29 IQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSDDGHG 88
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDLPILCERHTTSKL+K+EDL S+ SMGFRGEALASMTYV HVTVTTITKG +HGYR
Sbjct: 89 IRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQIHGYR 148
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
VSYRDGVME EPKACAAVKGTQIMVENLFYNMIARRKTLQNS+DDY KIVDLLSRMAIH+
Sbjct: 149 VSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKTLQNSADDYGKIVDLLSRMAIHY 208
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
NVSFSCRKHGA +ADVHS+ + SRLDSIR+VYGVSVA NL+++E S DSS F M+
Sbjct: 209 NNVSFSCRKHGAVKADVHSVVSPSRLDSIRSVYGVSVAKNLMKVEVSSC-DSSGCTFDME 267
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
G++SNSNYVAKKT +VLF+NDRLVEC+ LKRA+EIVYAAT PKASKPF+YMSI LP EHV
Sbjct: 268 GFISNSNYVAKKTILVLFINDRLVECSALKRAIEIVYAATLPKASKPFVYMSINLPREHV 327
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLH 381
D+N+HPTK+EVSLLNQE+I+E IQS VE+KLR +ND+RT++EQ VE S+ + D
Sbjct: 328 DINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTRTFQEQKVEYIQSTLTSQKSDSP 387
Query: 382 LN--PSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRN 439
++ PSG K QKVPVNKMVRTDSSDPAGRLHA++Q KP + +LS VRSSVRQRRN
Sbjct: 388 VSQKPSGQKTQKVPVNKMVRTDSSDPAGRLHAFLQPKPQSLPDKVSSLSVVRSSVRQRRN 447
Query: 440 LNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLS 499
ETADL+S+QELI VD CH G+L+ VR+C+++GMADDV+AL+Q+NTH+YLANVV+LS
Sbjct: 448 PKETADLSSVQELIAGVDSCCHPGMLETVRNCTYVGMADDVFALVQYNTHLYLANVVNLS 507
Query: 500 KELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTEL 559
KELMYQ LRRFAHFNAIQLSDPAPLSEL++LALKEEDLD N DDLKE+IAEMNTEL
Sbjct: 508 KELMYQQTLRRFAHFNAIQLSDPAPLSELILLALKEEDLDPGNDTKDDLKERIAEMNTEL 567
Query: 560 LKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQ 619
LK+KAEMLEEYF V ID+ NLSRLP+ILDQYTPDMDR+PEF+LCLGNDV+WEDEK CFQ
Sbjct: 568 LKEKAEMLEEYFSVHIDSSANLSRLPVILDQYTPDMDRVPEFLLCLGNDVEWEDEKSCFQ 627
Query: 620 AIAAALGNFYAMHPPLLPNPSGEGLQCYKKR 650
++AA+GNFYAMHPPLLPNPSG+G+Q Y KR
Sbjct: 628 GVSAAIGNFYAMHPPLLPNPSGDGIQFYSKR 658
>UNIPROTKB|Q5JN46 [details] [associations]
symbol:P0401G10.10 "Os01g0958900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008207
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:AP003238
EMBL:AK103319 RefSeq:NP_001045457.1 UniGene:Os.10900 STRING:Q5JN46
GeneID:4325393 KEGG:osa:4325393 ProtClustDB:CLSN2690816
Uniprot:Q5JN46
Length = 724
Score = 2222 (787.2 bits), Expect = 2.6e-230, P = 2.6e-230
Identities = 421/633 (66%), Positives = 524/633 (82%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RLEESVVNRIAAGEVIQRP SAVKEL+ENSLDA A+S++V VKDGGLKLIQVSDDGHG
Sbjct: 18 IRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSDDGHG 77
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR+EDL ILCERHTTSKLS YEDLQ+IKSMGFRGEALASMTYVGHVTVTTIT+G LHGYR
Sbjct: 78 IRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQLHGYR 137
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
VSYRDGVME+EPK CAAVKGTQ+MVENLFYNM+AR+KTLQNS+DDY KIVD +SR A+HH
Sbjct: 138 VSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSNDDYPKIVDFISRFAVHH 197
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
NV+FSCRKHGA RADVHS +TSSRLD+IR+VYG SV +L++++ S Y D++ +FKMD
Sbjct: 198 INVTFSCRKHGANRADVHSASTSSRLDAIRSVYGASVVRDLIEIKVS-YEDAADSIFKMD 256
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY+SN+NYVAKK TM+LF+NDRLV+C LKRA+E VY+AT P+ASKPFIYMSI LP EHV
Sbjct: 257 GYISNANYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLPSEHV 316
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLH 381
DVN+HPTK+EVSLLNQE I+E I++A+E KL SN +R ++ Q + S + NP KD
Sbjct: 317 DVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQALNLSGIAQANPQKDKV 376
Query: 382 LNPS---GSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRR 438
S G+K QK+PV++MVRTD +P+GRLH Y + +++ +L +VR+ VR RR
Sbjct: 377 SEASMGSGTKSQKIPVSQMVRTDPRNPSGRLHTYWHGQS-SNLEKKFDLVSVRNVVRSRR 435
Query: 439 NLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSL 498
N + DL+S EL+ ++D + H GLLDIV++C+++G+AD+ +AL+QHNT +YL NVV++
Sbjct: 436 NQKDAGDLSSRHELLVEIDSSFHPGLLDIVKNCTYVGLADEAFALIQHNTRLYLVNVVNI 495
Query: 499 SKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTE 558
SKELMYQ L RF +FNAIQLS+PAPL ELL++ALK+++L + E DD K +IAE+NTE
Sbjct: 496 SKELMYQQALCRFGNFNAIQLSEPAPLQELLVMALKDDEL--MSDEKDDEKLEIAEVNTE 553
Query: 559 LLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCF 618
+LK+ AEM+ EYF + ID G L+RLP++LDQYTPDMDR+PEFVL LGNDV W+DEK CF
Sbjct: 554 ILKENAEMINEYFSIHIDQDGKLTRLPVVLDQYTPDMDRLPEFVLALGNDVTWDDEKECF 613
Query: 619 QAIAAALGNFYAMHPPLLPNPSGEGLQCYKKRK 651
+ +A+A+GNFYA+HPP+LPNPSG G+ YKK +
Sbjct: 614 RTVASAVGNFYALHPPILPNPSGNGIHLYKKNR 646
>ZFIN|ZDB-GENE-040426-1600 [details] [associations]
symbol:mlh1 "mutL homolog 1, colon cancer,
nonpolyposis type 2 (E. coli)" species:7955 "Danio rerio"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007141 "male
meiosis I" evidence=IMP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0051026 "chiasma assembly" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 ZFIN:ZDB-GENE-040426-1600 GO:GO:0005524
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0007141 GO:GO:0051026 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 HOVERGEN:HBG006374
GO:GO:0043060 GeneTree:ENSGT00550000074923 EMBL:BX936318
IPI:IPI00614918 UniGene:Dr.77529 Ensembl:ENSDART00000133388
Uniprot:B8A6F5
Length = 725
Score = 976 (348.6 bits), Expect = 4.9e-142, Sum P(2) = 4.9e-142
Identities = 203/438 (46%), Positives = 294/438 (67%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+E+VVNRIAAGE+IQRP +A+KE++EN LDA +T+I + VK+GGLKLI + D+G G
Sbjct: 6 IRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNGTG 65
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR +D+ I+CER TTSKL +EDL SI + GFRGEALAS+++V HVT+TT T YR
Sbjct: 66 IRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYR 125
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+Y DG ++S PK CA +GT I VE+LFYN+ RRK L++ S++Y++IV+++SR AIH+
Sbjct: 126 ANYCDGKLKSPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRYAIHN 185
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+ SFS +K G ADV ++ +S LD+IR V+GV+V+ L+++E + F FK+
Sbjct: 186 SGKSFSVKKQGEMVADVKTLPNASVLDNIRVVFGVAVSRELIEVECED----QKFAFKVK 241
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY+SN+NY KK ++LF+N RLVE + LK+A+E VY A PK + PF+Y+S+ + P+++
Sbjct: 242 GYISNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNI 301
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLH 381
DVNVHPTK EV L+++ I+E IQ +E KL SN SRTY QT+ S+ + +K
Sbjct: 302 DVNVHPTKHEVHFLHEDSIIESIQKHIESKLLGSNSSRTYFTQTLLPGLSASASVAKAS- 360
Query: 382 LNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLN 441
+ S ++V ++MVRTDS A +L A++Q AS + +A R + +
Sbjct: 361 -SSSADSQERVYAHQMVRTDSK--AQKLDAFLQPS-----ASSSSTAAQRKTEKTSSTST 412
Query: 442 ETADLTSIQ--ELIDDVD 457
DL + EL+ D
Sbjct: 413 AVQDLVELDDAELLTAAD 430
Score = 434 (157.8 bits), Expect = 4.9e-142, Sum P(2) = 4.9e-142
Identities = 93/233 (39%), Positives = 145/233 (62%)
Query: 399 RTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDR 458
+TD+ P A + +PH +L+A +S+ +RR + LTSI+EL D ++
Sbjct: 440 QTDAQPPGDE--APPRKRPHVEEVK-EDLTA--ASLPRRRIVK----LTSIKELRDQIEL 490
Query: 459 NCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQ 518
H GL +++++ SF+G + L+QH T +YL N LS+EL YQ+++ F +F ++
Sbjct: 491 QTHKGLQELLQNHSFVGSVSPQWTLVQHQTKLYLLNTTKLSQELFYQILVYDFGNFGVLR 550
Query: 519 LSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTR 578
LS+PAPL +L MLAL E+ +E D KE +A+ + LKQKAEMLEEYF ++ID
Sbjct: 551 LSNPAPLYDLAMLALDSEESGW--TEEDGPKEGLAQYIVDFLKQKAEMLEEYFSLEIDAE 608
Query: 579 GNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAM 631
GNL+ LP++LD YTP M+ +P F+L L +V+W+ EK CF+ + +FY++
Sbjct: 609 GNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDKEKECFREFSVECSHFYSI 661
>UNIPROTKB|E1BQE0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005712 "chiasma" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0007060
"male meiosis chromosome segregation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IEA] [GO:0045190
"isotype switching" evidence=IEA] [GO:0045950 "negative regulation
of mitotic recombination" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0006298 GO:GO:0001673 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303
GO:GO:0045950 GO:GO:0000289 GO:GO:0000239 GO:GO:0000712
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AADN02001321 IPI:IPI00594951 RefSeq:XP_418828.1
UniGene:Gga.10857 ProteinModelPortal:E1BQE0
Ensembl:ENSGALT00000019702 GeneID:420729 KEGG:gga:420729
NextBio:20823604 Uniprot:E1BQE0
Length = 757
Score = 998 (356.4 bits), Expect = 8.0e-142, Sum P(2) = 8.0e-142
Identities = 208/442 (47%), Positives = 298/442 (67%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+E+VVNRIAAGEVIQRP +A+KE++EN LDA +TSI VVVK+GGLKLIQV D+G G
Sbjct: 8 IRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQVQDNGCG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL I+CER TTSKL K+EDL SI + GFRGEALAS+++V HVTVTT T YR
Sbjct: 68 IRKEDLHIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAKCAYR 127
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
SY DG +++ PK CA +GTQIMVE+LFYN+ RRK L+N S++Y KI++++ R AIH+
Sbjct: 128 ASYSDGKIKAPPKPCAGNQGTQIMVEDLFYNVNTRRKALKNPSEEYAKILEVVGRYAIHN 187
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+ +SFS +K G +DV +++ ++ +D+IR+++G +V+ L+++ + N FKM
Sbjct: 188 SGISFSVKKQGDTVSDVRTLSNATTVDNIRSIFGNAVSRELIEVGCEDAN----LAFKMK 243
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY++N+NY KK +LF+N RLVE L++A+E VYAA PK++ PF+Y+S+ + P++V
Sbjct: 244 GYITNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLSLEIAPKNV 303
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTV----ESSPSSPYNPS 377
DVNVHPTK EV L+++ I+E++Q VE KL SN SR Y QT+ E S S +
Sbjct: 304 DVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGAECSSSEVVKSA 363
Query: 378 KDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQR 437
G+ KV ++MVRTDS + +L A++Q + +++GP V
Sbjct: 364 ASSSTAAKGTS-DKVYAHQMVRTDSREQ--KLDAFLQPV-NNPLSAGPTEETTGDKVGPP 419
Query: 438 RNL--NETADLTSIQELIDDVD 457
+ A++ + EL++ D
Sbjct: 420 EGTVRPQDAEMEDVSELLETAD 441
Score = 410 (149.4 bits), Expect = 8.0e-142, Sum P(2) = 8.0e-142
Identities = 79/187 (42%), Positives = 124/187 (66%)
Query: 445 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 504
+LTS+ L +++ H L +++R SF+G +AL+QH T +YL N LS+EL Y
Sbjct: 503 NLTSVLTLQEEISNQSHESLQEMLRDHSFVGCVSPQWALVQHRTKLYLLNTTKLSQELFY 562
Query: 505 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 564
Q+++ FA+F ++LS+PAPL EL MLAL ED + +E D KE +AE E LK+K
Sbjct: 563 QILIYDFANFGVLRLSEPAPLYELAMLAL--EDPESGWTEEDGPKEGLAEYIVEFLKKKT 620
Query: 565 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 624
EML++YF ++ID GNL+ LP+++D Y P ++ +P F+L L +V+W++EK CF+ ++
Sbjct: 621 EMLKDYFSLEIDEEGNLTGLPLLIDNYIPLLEGLPMFILRLATEVNWDEEKECFETLSKE 680
Query: 625 LGNFYAM 631
L FY++
Sbjct: 681 LSMFYSI 687
Score = 42 (19.8 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 366 VESSPSSPYNPSKDLHLNPSGSKLQKVP 393
V+ P PSK HL+P + +K P
Sbjct: 448 VQQDAVMPGGPSKSGHLSPEKALPRKRP 475
>MGI|MGI:101938 [details] [associations]
symbol:Mlh1 "mutL homolog 1 (E. coli)" species:10090 "Mus
musculus" [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IMP] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0000795 "synaptonemal complex"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0002204 "somatic recombination of immunoglobulin
genes involved in immune response" evidence=IGI] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005694 "chromosome" evidence=IDA] [GO:0005712 "chiasma"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006298
"mismatch repair" evidence=ISO;IDA;IMP] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IMP] [GO:0007126 "meiosis"
evidence=IDA;TAS] [GO:0007129 "synapsis" evidence=IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IMP] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=ISO;IGI] [GO:0032389 "MutLalpha complex"
evidence=IDA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IMP] [GO:0043566
"structure-specific DNA binding" evidence=IDA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0045190 "isotype
switching" evidence=IMP] [GO:0045950 "negative regulation of
mitotic recombination" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 MGI:MGI:101938 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0005654 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0016887 GO:GO:0006298 Reactome:REACT_120463 GO:GO:0001673
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Reactome:REACT_27235
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 OrthoDB:EOG43N7C7
ChiTaRS:Mlh1 GO:GO:0032137 GO:GO:0007060 GO:GO:0043060
GO:GO:0051257 EMBL:AF250844 EMBL:AK168849 EMBL:U60872 EMBL:U59881
EMBL:U59882 EMBL:U59883 EMBL:U59884 IPI:IPI00122425
RefSeq:NP_081086.2 UniGene:Mm.486383 ProteinModelPortal:Q9JK91
SMR:Q9JK91 STRING:Q9JK91 PhosphoSite:Q9JK91 PaxDb:Q9JK91
PRIDE:Q9JK91 Ensembl:ENSMUST00000035079 GeneID:17350 KEGG:mmu:17350
GeneTree:ENSGT00550000074923 InParanoid:Q3TG77 NextBio:291948
Bgee:Q9JK91 CleanEx:MM_MLH1 Genevestigator:Q9JK91
GermOnline:ENSMUSG00000032498 Uniprot:Q9JK91
Length = 760
Score = 971 (346.9 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 200/421 (47%), Positives = 290/421 (68%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+E+VVNRIAAGEVIQRP +A+KE++EN LDA +T+I VVVK+GGLKLIQ+ D+G G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL I+CER TTSKL +EDL SI + GFRGEALAS+++V HVT+TT T YR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
SY DG +++ PK CA +GT I VE+LFYN+I RRK L+N S++Y KI++++ R +IH+
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+ +SFS +K G +DV ++ ++ +D+IR+++G +V+ L+++ + + FKM+
Sbjct: 188 SGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCED----KTLAFKMN 243
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY+SN+NY KK +LF+N RLVE A L++A+E VYAA PK + PF+Y+S+ + P++V
Sbjct: 244 GYISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNV 303
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYN----PS 377
DVNVHPTK EV L++E I++++Q +E KL SN SR Y QT+ + P P+
Sbjct: 304 DVNVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPT 363
Query: 378 KDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQR 437
+ + + KV +MVRTDS + +L A++Q P +S+ GP+ + VR
Sbjct: 364 TGVASSSTSGSGDKVYAYQMVRTDSREQ--KLDAFLQ--PVSSL--GPSQPQDPAPVRGA 417
Query: 438 R 438
R
Sbjct: 418 R 418
Score = 418 (152.2 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 89/236 (37%), Positives = 141/236 (59%)
Query: 396 KMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDD 455
K T S + + H ASG ++A + +RR +N LTS+ L ++
Sbjct: 463 KAAPTSSPGSSRKRHREDSDVEMVENASGKEMTA--ACYPRRRIIN----LTSVLSLQEE 516
Query: 456 VDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFN 515
+ CH L +++R+ SF+G + +AL QH T +YL N LS+EL YQ+++ FA+F
Sbjct: 517 ISERCHETLREMLRNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFG 576
Query: 516 AIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKI 575
++LS+PAPL +L MLAL + +E+D KE +AE E LK+KAEML +YF V+I
Sbjct: 577 VLRLSEPAPLFDLAMLALDSPESGW--TEDDGPKEGLAEYIVEFLKKKAEMLADYFSVEI 634
Query: 576 DTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAM 631
D GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++ FY++
Sbjct: 635 DEEGNLIGLPLLIDSYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSI 690
>UNIPROTKB|P40692 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0001673
"male germ cell nucleus" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0032407 "MutSalpha complex
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
EMBL:CH471055 GO:GO:0009636 GO:GO:0001666 GO:GO:0048477
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 Reactome:REACT_111183
GO:GO:0001673 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0006303
GO:GO:0045950 Orphanet:144 MIM:608089 GO:GO:0000289 GO:GO:0000239
GO:GO:0000712 GO:GO:0000795 GO:GO:0016446 eggNOG:COG0323
EMBL:AC006583 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:U07343 EMBL:U07418
EMBL:U40978 EMBL:U40960 EMBL:U40961 EMBL:U40962 EMBL:U40963
EMBL:U40964 EMBL:U40965 EMBL:U40966 EMBL:U40967 EMBL:U40968
EMBL:U40969 EMBL:U40970 EMBL:U40971 EMBL:U40972 EMBL:U40973
EMBL:U40974 EMBL:U40975 EMBL:U40976 EMBL:U40977 EMBL:U17857
EMBL:U17839 EMBL:U17840 EMBL:U17841 EMBL:U17842 EMBL:U17843
EMBL:U17844 EMBL:U17845 EMBL:U17846 EMBL:U17847 EMBL:U17848
EMBL:U17849 EMBL:U17851 EMBL:U17852 EMBL:U17853 EMBL:U17854
EMBL:U17855 EMBL:U17856 EMBL:AY217549 EMBL:AK295359 EMBL:AK298324
EMBL:AK316074 EMBL:AK316264 EMBL:AC011816 EMBL:BC006850
IPI:IPI00029754 IPI:IPI00742734 PIR:S43085 RefSeq:NP_000240.1
RefSeq:NP_001161089.1 RefSeq:NP_001161090.1 RefSeq:NP_001161091.1
RefSeq:NP_001245200.1 RefSeq:NP_001245202.1 RefSeq:NP_001245203.1
UniGene:Hs.195364 PDB:3NA3 PDB:3RBN PDBsum:3NA3 PDBsum:3RBN
ProteinModelPortal:P40692 SMR:P40692 DIP:DIP-27601N IntAct:P40692
MINT:MINT-257265 STRING:P40692 PhosphoSite:P40692 DMDM:730028
PaxDb:P40692 PRIDE:P40692 DNASU:4292 Ensembl:ENST00000231790
Ensembl:ENST00000455445 Ensembl:ENST00000458205
Ensembl:ENST00000539477 GeneID:4292 KEGG:hsa:4292 UCSC:uc003cgl.3
CTD:4292 GeneCards:GC03P037034 HGNC:HGNC:7127 HPA:CAB013294
MIM:120436 MIM:158320 MIM:609310 neXtProt:NX_P40692 Orphanet:587
PharmGKB:PA240 HOGENOM:HOG000176000 HOVERGEN:HBG006374
InParanoid:P40692 OrthoDB:EOG43N7C7 PhylomeDB:P40692 ChiTaRS:Mlh1
EvolutionaryTrace:P40692 GenomeRNAi:4292 NextBio:16893
PMAP-CutDB:P40692 ArrayExpress:P40692 Bgee:P40692 CleanEx:HS_MLH1
Genevestigator:P40692 GermOnline:ENSG00000076242 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 Uniprot:P40692
Length = 756
Score = 984 (351.4 bits), Expect = 2.4e-138, Sum P(2) = 2.4e-138
Identities = 198/405 (48%), Positives = 282/405 (69%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+E+VVNRIAAGEVIQRP +A+KE++EN LDA +TSI V+VK+GGLKLIQ+ D+G G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL I+CER TTSKL +EDL SI + GFRGEALAS+++V HVT+TT T YR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
SY DG +++ PK CA +GTQI VE+LFYN+ RRK L+N S++Y KI++++ R ++H+
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+SFS +K G ADV ++ +S +D+IR+++G +V+ L+++ + + FKM+
Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCED----KTLAFKMN 243
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY+SN+NY KK +LF+N RLVE L++A+E VYAA PK + PF+Y+S+ + P++V
Sbjct: 244 GYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNV 303
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSP----YNPS 377
DVNVHPTK EV L++E I+E++Q +E KL SN SR Y QT+ + P +
Sbjct: 304 DVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMVKST 363
Query: 378 KDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ--SKPHTS 420
L + + KV ++MVRTDS + +L A++Q SKP +S
Sbjct: 364 TSLTSSSTSGSSDKVYAHQMVRTDSREQ--KLDAFLQPLSKPLSS 406
Score = 391 (142.7 bits), Expect = 2.4e-138, Sum P(2) = 2.4e-138
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 445 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 504
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 502 NLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 561
Query: 505 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 564
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 562 QILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 619
Query: 565 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 624
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 620 EMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 679
Query: 625 LGNFYAMHPPLLPNPS 640
FY++ + S
Sbjct: 680 CAMFYSIRKQYISEES 695
Score = 42 (19.8 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 536 EDLDVENSENDDLKEKIA 553
ED DVE E+D KE A
Sbjct: 475 EDSDVEMVEDDSRKEMTA 492
>UNIPROTKB|E2RBM6 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043060 "meiotic metaphase I plate congression" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0016446 "somatic hypermutation
of immunoglobulin genes" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AAEX03013477 RefSeq:XP_534219.2 Ensembl:ENSCAFT00000007703
GeneID:477019 KEGG:cfa:477019 Uniprot:E2RBM6
Length = 757
Score = 968 (345.8 bits), Expect = 3.5e-137, Sum P(2) = 3.5e-137
Identities = 203/437 (46%), Positives = 292/437 (66%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+E+VVNRIAAGEVIQRP +A+KE++EN LDA +TSI VVVK+GGLKLIQ+ D+G G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL I+CER TTSKL +EDL SI + GFRGEALAS+++V HVT+TT T YR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTAEAKCAYR 127
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+Y DG +++ PK CA +GTQI VE+LFYN+ RRK L+N S++Y KI++++ R +IH+
Sbjct: 128 ATYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+ +SFS +K G ADV ++ ++ +D+IR+++G +V+ L+++ + + FKM+
Sbjct: 188 SGISFSVKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVGCED----KTLAFKMN 243
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY+SN+NY KK +LF+N RLVE L++A+E VYAA PK + PF+Y+S+ + P++V
Sbjct: 244 GYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNV 303
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNP--SKD 379
DVNVHPTK EV L+++ I+E++Q +E KL SN SR Y QT+ + P
Sbjct: 304 DVNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVVKST 363
Query: 380 LHLNPSGSKL-QKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAV----RSSV 434
PS + KV ++MVRTDS + +L A++Q P + S L AV R+ V
Sbjct: 364 TGATPSSTGSGDKVYAHQMVRTDSREQ--KLDAFLQ--PMSKALSS-QLQAVVPEDRTDV 418
Query: 435 RQRRNLNETADLTSIQE 451
R + ++ + E
Sbjct: 419 SSGRTGQQDEEMFELPE 435
Score = 396 (144.5 bits), Expect = 3.5e-137, Sum P(2) = 3.5e-137
Identities = 83/218 (38%), Positives = 131/218 (60%)
Query: 445 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 504
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 503 NLTSVLSLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 562
Query: 505 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 564
Q+++ FA+F ++LS+PAPL EL MLAL + +E D KE +AE E LK+KA
Sbjct: 563 QILIYDFANFGVLRLSEPAPLFELAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 620
Query: 565 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 624
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 621 EMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 680
Query: 625 LGNFYAMHPPLLPNPSG-EGLQ---CYKKRKPLKNPVD 658
FY++ + S G Q C P K V+
Sbjct: 681 CAMFYSIRKQYISEESTLSGQQSEVCGSSANPWKWTVE 718
Score = 44 (20.5 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 312 MSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPS 371
+ V+P + DV+ T ++ + + +++ +A + + T + + PS
Sbjct: 407 LQAVVPEDRTDVSSGRTGQQDEEMFELPEPDQV-AATNQGMEEETTEGTSETSEKKGPPS 465
Query: 372 SPYNPSK 378
SP NP K
Sbjct: 466 SPGNPRK 472
>UNIPROTKB|F1MPG0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0048477 GO:GO:0007283 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:DAAA02053630 EMBL:DAAA02053631 IPI:IPI00705361
RefSeq:NP_001069462.2 UniGene:Bt.30133 Ensembl:ENSBTAT00000022288
GeneID:533652 KEGG:bta:533652 NextBio:20876104 ArrayExpress:F1MPG0
Uniprot:F1MPG0
Length = 758
Score = 960 (343.0 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
Identities = 191/397 (48%), Positives = 277/397 (69%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+E+VVNRIAAGEVIQRP +A+KE++EN LDA +TSI VVVK+GGLKLIQ+ D+G G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL I+CER TTSKL +EDL I + GFRGEALAS+++V HVT+TT T YR
Sbjct: 68 IRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
Y DG +++ PK CA +GTQI VE+LFYN+ RRK L+N S++Y KI++++ R A+H+
Sbjct: 128 AHYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYAVHN 187
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+ + FS +K G ADV ++ ++ +D+IR+++G +V+ L+++E + + FKM+
Sbjct: 188 SGIGFSVKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVECED----KTLAFKMN 243
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY+SN+NY KK +LF+N RLVE A L++A+E VYAA PK++ PF+Y+S+ + P++V
Sbjct: 244 GYISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKSTHPFLYLSLEISPQNV 303
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLH 381
DVNVHPTK EV L+++ I+E++Q +E +L SN SRTY QT+ P +
Sbjct: 304 DVNVHPTKHEVHFLHEDSILERLQQHIESRLLGSNASRTYFTQTLLPGLPGPSGEAVKST 363
Query: 382 LNPSGSKL----QKVPVNKMVRTDSSDPAGRLHAYVQ 414
+ + S +V ++MVRTD + +L A++Q
Sbjct: 364 ASVTSSSTAGSGDRVYAHQMVRTDCREQ--KLDAFLQ 398
Score = 389 (142.0 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
Identities = 75/187 (40%), Positives = 122/187 (65%)
Query: 445 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 504
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 504 NLTSVLSLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTRLSEELFY 563
Query: 505 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 564
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 564 QILVYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 621
Query: 565 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 624
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 622 EMLADYFSLEIDEEGNLVGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 681
Query: 625 LGNFYAM 631
FY++
Sbjct: 682 CAMFYSI 688
>RGD|620937 [details] [associations]
symbol:Mlh1 "mutL homolog 1, colon cancer, nonpolyposis type 2
(E. coli)" species:10116 "Rattus norvegicus" [GO:0000239
"pachytene" evidence=IEA;ISO] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA;ISO] [GO:0000712 "resolution
of meiotic recombination intermediates" evidence=IEA;ISO]
[GO:0000793 "condensed chromosome" evidence=ISO] [GO:0000794
"condensed nuclear chromosome" evidence=ISO] [GO:0000795
"synaptonemal complex" evidence=IEA;ISO;IDA] [GO:0001666 "response
to hypoxia" evidence=IEP] [GO:0001673 "male germ cell nucleus"
evidence=IEA;ISO] [GO:0002204 "somatic recombination of
immunoglobulin genes involved in immune response" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003697
"single-stranded DNA binding" evidence=IEA;ISO;IBA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005712 "chiasma"
evidence=IEA;ISO;IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006298
"mismatch repair" evidence=IEA;ISO;IBA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA;ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=ISO] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISO;IBA] [GO:0007140 "male meiosis"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA;IEP;ISO]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA;ISO] [GO:0009636 "response to toxic
substance" evidence=IEP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA;ISO;IBA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=IEA;ISO] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IEA;ISO;IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA;ISO;IBA] [GO:0042493 "response to
drug" evidence=IEP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IEA;ISO] [GO:0043566 "structure-specific DNA
binding" evidence=ISO] [GO:0045132 "meiotic chromosome segregation"
evidence=ISO] [GO:0045190 "isotype switching" evidence=IEA;ISO]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA;ISO] [GO:0048477 "oogenesis" evidence=IEA;ISO]
[GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 952 (340.2 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 194/398 (48%), Positives = 277/398 (69%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+E+VVNRIAAGEVIQRP +A+KE+ EN LDA +T+I V+V++GGLKLIQ+ D+G G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL I+CER TTSKL +EDL I + GFRGEALAS+++V HVT+TT T YR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
SY DG +++ PK CA +GT I VE+LFYN+I R+K L+N S++Y KI++++ R +IH+
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRKKALKNPSEEYGKILEVVGRYSIHN 187
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+ +SFS +K G +DV ++ ++ +D+IR+++G +V+ L+++ + + FKM+
Sbjct: 188 SGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCED----KTLAFKMN 243
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY+SN+NY KK +LF+N RLVE A LK+A+E VYAA PK + PF+Y+ + + P++V
Sbjct: 244 GYISNANYSVKKCIFLLFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLILEISPQNV 303
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPS-KDL 380
DVNVHPTK EV L++E I+E++Q +E KL SN SR Y QT+ + P + K
Sbjct: 304 DVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAVKST 363
Query: 381 ----HLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ 414
+ SGS KV +MVRTDS D +L A++Q
Sbjct: 364 TGIASSSTSGSG-DKVHAYQMVRTDSRDQ--KLDAFMQ 398
Score = 373 (136.4 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 84/220 (38%), Positives = 133/220 (60%)
Query: 436 QRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANV 495
+RR +N T+ L S+QE I+D R H L +++R+ +F+G + +AL QH T +YL N
Sbjct: 499 RRRIINLTSVL-SLQEEIND--RG-HETLREMLRNHTFVGCVNPQWALAQHQTKLYLLNT 554
Query: 496 VSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEM 555
LS+EL YQ+++ FA+F ++L +PAPL + MLAL + +E D KE +AE
Sbjct: 555 TKLSEELFYQILIYDFANFGVLRLPEPAPLFDFAMLALDSPESGW--TEEDGPKEGLAEY 612
Query: 556 NTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEK 615
E LK+KA+ML +YF V+ID GNL LP+++D Y P ++ +P F+L L +V+W++E+
Sbjct: 613 IVEFLKKKAKMLADYFSVEIDEEGNLIGLPLLIDSYVPPLEGLPIFILRLATEVNWDEEE 672
Query: 616 CCFQAIAAALGNFYAMHPPLLPNPSG-EGLQCYKKRKPLK 654
C F++++ FY++ + S G Q P K
Sbjct: 673 C-FESLSKECAVFYSIRKQYILEESALSGQQSDMPGSPSK 711
Score = 48 (22.0 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 536 EDLDVENSENDDLKEKIA 553
ED DVE END KE A
Sbjct: 477 EDSDVEMMENDSRKEMTA 494
>UNIPROTKB|P97679 [details] [associations]
symbol:Mlh1 "DNA mismatch repair protein Mlh1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 952 (340.2 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 194/398 (48%), Positives = 277/398 (69%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+E+VVNRIAAGEVIQRP +A+KE+ EN LDA +T+I V+V++GGLKLIQ+ D+G G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL I+CER TTSKL +EDL I + GFRGEALAS+++V HVT+TT T YR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
SY DG +++ PK CA +GT I VE+LFYN+I R+K L+N S++Y KI++++ R +IH+
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRKKALKNPSEEYGKILEVVGRYSIHN 187
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+ +SFS +K G +DV ++ ++ +D+IR+++G +V+ L+++ + + FKM+
Sbjct: 188 SGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCED----KTLAFKMN 243
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
GY+SN+NY KK +LF+N RLVE A LK+A+E VYAA PK + PF+Y+ + + P++V
Sbjct: 244 GYISNANYSVKKCIFLLFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLILEISPQNV 303
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPS-KDL 380
DVNVHPTK EV L++E I+E++Q +E KL SN SR Y QT+ + P + K
Sbjct: 304 DVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAVKST 363
Query: 381 ----HLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ 414
+ SGS KV +MVRTDS D +L A++Q
Sbjct: 364 TGIASSSTSGSG-DKVHAYQMVRTDSRDQ--KLDAFMQ 398
Score = 373 (136.4 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 84/220 (38%), Positives = 133/220 (60%)
Query: 436 QRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANV 495
+RR +N T+ L S+QE I+D R H L +++R+ +F+G + +AL QH T +YL N
Sbjct: 499 RRRIINLTSVL-SLQEEIND--RG-HETLREMLRNHTFVGCVNPQWALAQHQTKLYLLNT 554
Query: 496 VSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEM 555
LS+EL YQ+++ FA+F ++L +PAPL + MLAL + +E D KE +AE
Sbjct: 555 TKLSEELFYQILIYDFANFGVLRLPEPAPLFDFAMLALDSPESGW--TEEDGPKEGLAEY 612
Query: 556 NTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEK 615
E LK+KA+ML +YF V+ID GNL LP+++D Y P ++ +P F+L L +V+W++E+
Sbjct: 613 IVEFLKKKAKMLADYFSVEIDEEGNLIGLPLLIDSYVPPLEGLPIFILRLATEVNWDEEE 672
Query: 616 CCFQAIAAALGNFYAMHPPLLPNPSG-EGLQCYKKRKPLK 654
C F++++ FY++ + S G Q P K
Sbjct: 673 C-FESLSKECAVFYSIRKQYILEESALSGQQSDMPGSPSK 711
Score = 48 (22.0 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 536 EDLDVENSENDDLKEKIA 553
ED DVE END KE A
Sbjct: 477 EDSDVEMMENDSRKEMTA 494
>UNIPROTKB|A8HM54 [details] [associations]
symbol:MLH1 "Mismatch repair protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 EMBL:DS496108
GO:GO:0000795 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 RefSeq:XP_001690102.1
ProteinModelPortal:A8HM54 STRING:A8HM54 EnsemblPlants:EDP09840
GeneID:5715471 KEGG:cre:CHLREDRAFT_146633 OMA:NDEENNT
ProtClustDB:CLSN2920798 Uniprot:A8HM54
Length = 1007
Score = 943 (337.0 bits), Expect = 3.8e-129, Sum P(2) = 3.8e-129
Identities = 187/350 (53%), Positives = 257/350 (73%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L+E+VVN+IAAGEVIQRP SA+KE++ENSLDA +T I+V VKDGG KL+Q++D+G G
Sbjct: 39 IRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGSTQISVTVKDGGNKLLQITDNGSG 98
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL ILC RHTTSKLS++EDL++I ++GFRGEAL S+++V H+ VTT+ + +G+R
Sbjct: 99 IRKEDLAILCHRHTTSKLSQFEDLETISTLGFRGEALCSISFVSHMAVTTMARDAQYGFR 158
Query: 142 VSYRDGVMESE-PKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
V+Y+D ME+ PK AAV GT I VE+LFYN+ RRK L+++S++Y I+D L R A++
Sbjct: 159 VTYKDSAMEAPGPKPVAAVPGTTITVEDLFYNVPTRRKALKSASEEYGLILDTLGRYAVY 218
Query: 201 HT-NVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFV-- 257
V FSCR+HG R D+ + A SRLD++R VYG VA L+ L + + V
Sbjct: 219 SAPGVGFSCRRHGDGRPDISTTAAGSRLDAVRAVYGADVARELLPLALAAGGGTGPEVPV 278
Query: 258 -----FKMDGYVSNSNYVA-KKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIY 311
K++G +S +NY + KKT +VLF+N R VECAPL+RA+E VYAA PKASKP+++
Sbjct: 279 EGPLGIKLEGLISGANYGSGKKTVLVLFINGRCVECAPLRRALEGVYAALLPKASKPWLF 338
Query: 312 MSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTY 361
+ + LPP V+VN+HPTKREV ++Q ++E I+ AVE KL SNDSRT+
Sbjct: 339 LDLRLPPRQVEVNMHPTKREVGFMHQAEVIEVIRGAVEAKLLASNDSRTF 388
Score = 345 (126.5 bits), Expect = 3.8e-129, Sum P(2) = 3.8e-129
Identities = 81/229 (35%), Positives = 126/229 (55%)
Query: 422 ASGPNLSAVRSSVRQRRNLNETADL--TSIQELIDDVDRNCHSGLLDIVRHCSFIGMADD 479
ASG +L+A ++ R R A ++ L+ + + +CH L D++R +F+G+AD
Sbjct: 647 ASG-DLAAAAAAARALRRTPPAAVTRDAAVLSLLAEAEADCHGSLADLLREHTFVGIADG 705
Query: 480 VYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLD 539
ALLQH T +YL +V +LS +L YQL LRR+ + L P +SEL+ L L+ ++
Sbjct: 706 SLALLQHGTRLYLVDVGALSADLFYQLALRRWEQPLRLALEPPPLVSELVDLGLQLLEVQ 765
Query: 540 VENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIP 599
E D E++ + TELL+Q LE + +D +G L+ +P++L+ P+ R+
Sbjct: 766 GEWQPEDGSPEELGALVTELLQQNRPELEREIGLVVDEQGRLASVPLLLEGLLPEPSRLA 825
Query: 600 EFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPL-----LPNPSGEG 643
+ V+ L DVDW+ + A+A AL N YA PPL P PSG G
Sbjct: 826 DLVVALAKDVDWDSPRERALALARALANMYAARPPLPQGGGAPGPSGSG 874
>UNIPROTKB|H0Y818 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
Ensembl:ENST00000456676 Uniprot:H0Y818
Length = 679
Score = 980 (350.0 bits), Expect = 2.7e-124, Sum P(2) = 2.7e-124
Identities = 197/403 (48%), Positives = 281/403 (69%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
RL+E+VVNRIAAGEVIQRP +A+KE++EN LDA +TSI V+VK+GGLKLIQ+ D+G GIR
Sbjct: 2 RLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIR 61
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
EDL I+CER TTSKL +EDL SI + GFRGEALAS+++V HVT+TT T YR S
Sbjct: 62 KEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYRAS 121
Query: 144 YRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTN 203
Y DG +++ PK CA +GTQI VE+LFYN+ RRK L+N S++Y KI++++ R ++H+
Sbjct: 122 YSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHNAG 181
Query: 204 VSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGY 263
+SFS +K G ADV ++ +S +D+IR+++G +V+ L+++ + + FKM+GY
Sbjct: 182 ISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCED----KTLAFKMNGY 237
Query: 264 VSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDV 323
+SN+NY KK +LF+N RLVE L++A+E VYAA PK + PF+Y+S+ + P++VDV
Sbjct: 238 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 297
Query: 324 NVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSP----YNPSKD 379
NVHPTK EV L++E I+E++Q +E KL SN SR Y QT+ + P +
Sbjct: 298 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMVKSTTS 357
Query: 380 LHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ--SKPHTS 420
L + + KV ++MVRTDS + +L A++Q SKP +S
Sbjct: 358 LTSSSTSGSSDKVYAHQMVRTDSREQ--KLDAFLQPLSKPLSS 398
Score = 262 (97.3 bits), Expect = 2.7e-124, Sum P(2) = 2.7e-124
Identities = 55/132 (41%), Positives = 85/132 (64%)
Query: 445 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 504
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 494 NLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 553
Query: 505 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 564
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 554 QILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 611
Query: 565 EMLEEYFCVKID 576
EML +YF ++ID
Sbjct: 612 EMLADYFSLEID 623
Score = 42 (19.8 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 536 EDLDVENSENDDLKEKIA 553
ED DVE E+D KE A
Sbjct: 467 EDSDVEMVEDDSRKEMTA 484
>FB|FBgn0011659 [details] [associations]
symbol:Mlh1 "Mlh1" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 EMBL:AE013599
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
CTD:4292 GeneTree:ENSGT00550000074923 RefSeq:NP_477022.1
UniGene:Dm.26257 ProteinModelPortal:A1Z7C1 SMR:A1Z7C1 STRING:A1Z7C1
PRIDE:A1Z7C1 EnsemblMetazoa:FBtr0088790 GeneID:35796
KEGG:dme:Dmel_CG11482 UCSC:CG11482-RA FlyBase:FBgn0011659
InParanoid:A1Z7C1 OrthoDB:EOG470RZ8 PhylomeDB:A1Z7C1
GenomeRNAi:35796 NextBio:795251 Bgee:A1Z7C1 Uniprot:A1Z7C1
Length = 664
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 247/615 (40%), Positives = 379/615 (61%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L+E VVNRIAAGE+IQRP +A+KEL+ENSLDA +T I V VK GGLKL+Q+ D+G G
Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTG 69
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR EDL I+CER TTSKL+++EDL I + GFRGEALAS+++V H+++ T T GY+
Sbjct: 70 IRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYK 129
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+Y DG ++ +PK CA +GT I +E+LFYNM RR+ L++ ++++ ++ ++L+R A+H+
Sbjct: 130 ATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHN 189
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
V F+ RK G A+ + + SSR ++IR +YG +++ L LE S ++ + F+ +
Sbjct: 190 PRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISKEL--LEFSHRDEV--YKFEAE 245
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
++ NY AKK M+LF+N RLVE L+ +V+ +YA P+ PF+YMS+ LPP+++
Sbjct: 246 CLITQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNL 305
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLH 381
DVNVHPTK EV L QE IV+ I+ VE +L SN +RT+ +Q P +P DL
Sbjct: 306 DVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQL--RLPGAP-----DLD 358
Query: 382 LNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQS--KPHTSVASGPNLSAVR---SSVR- 435
K Q++ +MVRTDS++ +L ++ K + V+S + A R S R
Sbjct: 359 ETQLADKTQRIYPKEMVRTDSTEQ--KLDKFLAPLVKSDSGVSSSSSQEASRLPEESFRV 416
Query: 436 QRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANV 495
+ L+S+ ++ V+R C L +++ ++G D+ AL QH T +Y+ N
Sbjct: 417 TAAKKSREVRLSSVLDMRKRVERQCSVQLRSTLKNLVYVGCVDERRALFQHETRLYMCNT 476
Query: 496 VSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEM 555
S S+EL YQ ++ F + + I +S P PL ELL+L+L+ E + D K ++A+
Sbjct: 477 RSFSEELFYQRMIYEFQNCSEITISPPLPLKELLILSLESEAAGWTPEDGD--KAELADG 534
Query: 556 NTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEK 615
++L +KA ++ EYF ++I G L LP +L Q+ P + +P ++L L +VDWE E
Sbjct: 535 AADILLKKAPIMREYFGLRISEDGMLESLPSLLHQHRPCVAHLPVYLLRLATEVDWEQET 594
Query: 616 CCFQAIAAALGNFYA 630
CF+ FYA
Sbjct: 595 RCFETFCRETARFYA 609
>SGD|S000004777 [details] [associations]
symbol:MLH1 "Protein required for mismatch repair in mitosis
and meiosis" species:4932 "Saccharomyces cerevisiae" [GO:0000710
"meiotic mismatch repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=IEA;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0000404
"loop DNA binding" evidence=IDA] [GO:0032135 "DNA insertion or
deletion binding" evidence=IDA] [GO:0032139 "dinucleotide insertion
or deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0005524 "ATP binding" evidence=IEA;IMP] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000713
"meiotic heteroduplex formation" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IPI] [GO:0032390 "MutLbeta complex"
evidence=IPI] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 SGD:S000004777 Prosite:PS00058
GO:GO:0005739 GO:GO:0005524 GO:GO:0016887 EMBL:BK006946
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:Z49705 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
GeneTree:ENSGT00550000074923 OrthoDB:EOG43XZBN EMBL:U07187
EMBL:DQ356633 EMBL:DQ356634 EMBL:DQ356635 EMBL:DQ356636
EMBL:DQ356637 EMBL:DQ356638 EMBL:DQ356639 EMBL:DQ356640
EMBL:DQ356641 EMBL:DQ356642 EMBL:DQ356643 EMBL:DQ356644
EMBL:DQ356645 EMBL:DQ356646 PIR:S54525 RefSeq:NP_013890.1
ProteinModelPortal:P38920 SMR:P38920 DIP:DIP-2412N IntAct:P38920
MINT:MINT-625234 STRING:P38920 EnsemblFungi:YMR167W GeneID:855203
KEGG:sce:YMR167W CYGD:YMR167w NextBio:978693 Genevestigator:P38920
GermOnline:YMR167W GO:GO:0000713 GO:GO:0000710 Uniprot:P38920
Length = 769
Score = 842 (301.5 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 175/386 (45%), Positives = 262/386 (67%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L+ SVVN+IAAGE+I PV+A+KE++ENS+DA+AT I+++VK+GG+K++Q++D+G G
Sbjct: 5 IKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGSG 64
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I DLPILCER TTSKL K+EDL I++ GFRGEALAS+++V VTVTT K +R
Sbjct: 65 INKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAWR 124
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
VSY +G M PK A GT I+VE+LF+N+ +R + L++ +D+Y+KI+D++ R AIH
Sbjct: 125 VSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIHS 184
Query: 202 TNVSFSCRKHGAARADVHSIATSSRL-DSIRTVYGVSVASNLVQLEASEYNDSSSFVFKM 260
++ FSC+K G + + S+ S + D IRTV+ SVASNL+ S+ D + + +
Sbjct: 185 KDIGFSCKKFGDSNYSL-SVKPSYTVQDRIRTVFNKSVASNLITFHISKVEDLN--LESV 241
Query: 261 DGYVSNSNYVAKKT-TMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 319
DG V N N+++KK+ + + F+N+RLV C L+RA+ VY+ PK ++PFIY+ IV+ P
Sbjct: 242 DGKVCNLNFISKKSISPIFFINNRLVTCDLLRRALNSVYSNYLPKGNRPFIYLGIVIDPA 301
Query: 320 HVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESS-PSS--PYNP 376
VDVNVHPTKREV L+Q+ I+EKI + + +L + SRT+K ++ ++ P S P+N
Sbjct: 302 AVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTFKASSISTNKPESLIPFND 361
Query: 377 SKDLHLNPSGSKLQKVPVNKMVRTDS 402
+ + N + +V N +S
Sbjct: 362 TIESDRNRKSLRQAQVVENSYTTANS 387
Score = 239 (89.2 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 66/213 (30%), Positives = 110/213 (51%)
Query: 435 RQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDV--YALLQHNTHMYL 492
++R N+N LTSI++L + VD + H L DI + +++G+ D+ A +QH+ ++L
Sbjct: 504 KERVNVN----LTSIKKLREKVDDSIHRELTDIFANLNYVGVVDEERRLAAIQHDLKLFL 559
Query: 493 ANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKI 552
+ S+ EL YQ+ L FA+F I L ++++ L E D N +D KEKI
Sbjct: 560 IDYGSVCYELFYQIGLTDFANFGKINLQSTNVSDDIVLYNLLSE-FDELN--DDASKEKI 616
Query: 553 AEMNTELLKQKAEMLEEYFCVKIDTRG--------NLSRLPIILDQYTPDMDRIPEFVLC 604
++ + ML EY+ +++ G L LP++L Y P + ++P F+
Sbjct: 617 ISKIWDM----SSMLNEYYSIELVNDGLDNDLKSVKLKSLPLLLKGYIPSLVKLPFFIYR 672
Query: 605 LGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLP 637
LG +VDWEDE+ C I + Y P ++P
Sbjct: 673 LGKEVDWEDEQECLDGILREIALLYI--PDMVP 703
>UNIPROTKB|E9PCU2 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 GO:GO:0005524 GO:GO:0005634
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AC006583 KO:K08734 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 RefSeq:NP_001161089.1
UniGene:Hs.195364 DNASU:4292 GeneID:4292 KEGG:hsa:4292 CTD:4292
HGNC:HGNC:7127 ChiTaRS:Mlh1 GenomeRNAi:4292 NextBio:16893
IPI:IPI00924824 ProteinModelPortal:E9PCU2 SMR:E9PCU2 PRIDE:E9PCU2
Ensembl:ENST00000435176 UCSC:uc011ayc.2 ArrayExpress:E9PCU2
Bgee:E9PCU2 Uniprot:E9PCU2
Length = 658
Score = 649 (233.5 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 133/311 (42%), Positives = 203/311 (65%)
Query: 116 EALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIA 175
EALAS+++V HVT+TT T YR SY DG +++ PK CA +GTQI VE+LFYN+
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 176 RRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYG 235
RRK L+N S++Y KI++++ R ++H+ +SFS +K G ADV ++ +S +D+IR+++G
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 236 VSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVE 295
+V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE L++A+E
Sbjct: 124 NAVSRELIEIGCED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIE 179
Query: 296 IVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQS 355
VYAA PK + PF+Y+S+ + P++VDVNVHPTK EV L++E I+E++Q +E KL S
Sbjct: 180 TVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGS 239
Query: 356 NDSRTYKEQTVESSPSSP----YNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHA 411
N SR Y QT+ + P + L + + KV ++MVRTDS + +L A
Sbjct: 240 NSSRMYFTQTLLPGLAGPSGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQ--KLDA 297
Query: 412 YVQ--SKPHTS 420
++Q SKP +S
Sbjct: 298 FLQPLSKPLSS 308
Score = 391 (142.7 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 445 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 504
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 404 NLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 463
Query: 505 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 564
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 464 QILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 521
Query: 565 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 624
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 522 EMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 581
Query: 625 LGNFYAMHPPLLPNPS 640
FY++ + S
Sbjct: 582 CAMFYSIRKQYISEES 597
Score = 42 (19.8 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 536 EDLDVENSENDDLKEKIA 553
ED DVE E+D KE A
Sbjct: 377 EDSDVEMVEDDSRKEMTA 394
>CGD|CAL0005779 [details] [associations]
symbol:MLH1 species:5476 "Candida albicans" [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032390 "MutLbeta
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0000713 "meiotic heteroduplex formation"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 CGD:CAL0005779 Prosite:PS00058
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACQ01000151
EMBL:AACQ01000146 eggNOG:COG0323 KO:K08734 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
RefSeq:XP_712616.1 RefSeq:XP_712766.1 ProteinModelPortal:Q59SL0
STRING:Q59SL0 GeneID:3645595 GeneID:3645758 KEGG:cal:CaO19.11638
KEGG:cal:CaO19.4162 Uniprot:Q59SL0
Length = 717
Score = 832 (297.9 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 180/411 (43%), Positives = 265/411 (64%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+ESV+N+IAAGE+I +P +A+KE++ENS+DA AT I ++VKDGGLKL+Q++D+GHG
Sbjct: 8 IKRLDESVINKIAAGEIIIQPANALKEMLENSIDARATMIEILVKDGGLKLLQITDNGHG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I DLP+LCER TSKLSK+EDL+SI + GFRGEALAS++++ ++V T Y+
Sbjct: 68 ISKIDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQPNSKLAYK 127
Query: 142 VSYRDGVMES----------EPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIV 191
Y +G + S EPK A GTQI+VE+LFYN+ +R + L++ SD++ KI+
Sbjct: 128 AYYMNGQLCSSNFKSSNTNVEPKPIAGKDGTQIIVEDLFYNIPSRLRGLKSKSDEFAKIL 187
Query: 192 DLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN 251
D++ R AIH NV FSC+K+G V++ + IR VYG ++A+ L++++ N
Sbjct: 188 DIVGRYAIHCDNVGFSCKKYGDPLQQVNTRPQMPIKERIRVVYGSAIANELLEIDGIS-N 246
Query: 252 DSSSFVFKMDGYVSNSNYVAKKTTM-VLFVNDRLVECAPLKRAVEIVYAATFPKASKPFI 310
D V K+ G ++N+NY KK ++F+N RLV C PLKRA+ V++ PK S F
Sbjct: 247 DELGLV-KVSGVMTNANYNNKKKIQPIIFINHRLVTCEPLKRAINAVFSYFLPKGSHSFY 305
Query: 311 YMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTV---- 366
Y+S+ + PE++DVNVHPTKREV LN++ I++ I S + KL + SR +K Q+V
Sbjct: 306 YLSLEIKPENLDVNVHPTKREVRFLNEDEIIDTIVSEIHTKLSSVDTSRKFKTQSVITKR 365
Query: 367 ESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKP 417
+S L PS K ++ NKMVR D+S +L +++Q +P
Sbjct: 366 RNSDEELEEHQLPKTLQPSLKKYRQE--NKMVRVDASQ--SKLSSFMQQQP 412
Score = 185 (70.2 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 55/217 (25%), Positives = 99/217 (45%)
Query: 420 SVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADD 479
S+ P+ ++ R + +L SI L +D+ L +I + ++G+ D
Sbjct: 462 SILESPSKLEMKIETNHSRKQVQV-NLDSIASLKNDLTLIIDKPLTNIFNNAVYVGIVDP 520
Query: 480 VYAL--LQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLM-LALKEE 536
L Q++ ++L + ++ E YQ+ L F +F I+ +P L ++L L K E
Sbjct: 521 WKRLCCFQYDVKLFLCDYAAMLLEFYYQIGLHEFCNFGEIEFDEPIKLIDILQPLYDKNE 580
Query: 537 DLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMD 596
DL EK+ + K +M +EYF + ID L+ LP++L PD +
Sbjct: 581 DLIP--------MEKVIHA---IFHMK-DMFKEYFQIVIDDDKQLTTLPMLLVGVEPDFN 628
Query: 597 RIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHP 633
++P + LG +++ DEK C + + + FY P
Sbjct: 629 KLPYLIYRLGTKINYGDEKDCLRGVLRQIALFYLPEP 665
>ASPGD|ASPL0000056766 [details] [associations]
symbol:AN0126 species:162425 "Emericella nidulans"
[GO:0000710 "meiotic mismatch repair" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0000713
"meiotic heteroduplex formation" evidence=IEA] [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032390 "MutLbeta complex" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005739
GO:GO:0005524 EMBL:BN001308 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000004 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404 RefSeq:XP_657730.1
ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 219/559 (39%), Positives = 326/559 (58%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L+ VVN+IAAGE+I P+ A+KEL+EN++DA +TSI ++VK+GGLKL+Q++D+GHG
Sbjct: 31 IRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLKLLQITDNGHG 90
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I +DLPILCER TTSKL ++EDL SI + GFRGEALAS++++ H+TVTT T +R
Sbjct: 91 IDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEALASISHIAHLTVTTKTADSSCAWR 150
Query: 142 VSYRDGVM-------ESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLL 194
Y DG + + PKA A GTQI VE+LFYN+ RR+ +++S++Y KI+D++
Sbjct: 151 AHYADGKLVPPKPGQSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVV 210
Query: 195 SRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSS 254
R A+H + V+FSCRKHG A + + + +D IR ++G +VA+ LV+ +
Sbjct: 211 GRYAVHCSGVAFSCRKHGDAGVSISTAVALNTIDRIRQIHGSAVANELVEFSVKD----E 266
Query: 255 SFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSI 314
F G V+N+NY K+TT++LF+N R VE +KRAVE YA+ PK PF+Y+ +
Sbjct: 267 KLGFTSSGLVTNANYHVKRTTILLFINHRSVESTAIKRAVEQTYASFLPKGGHPFVYIDL 326
Query: 315 VLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPY 374
+ P +DVNVHPTKREV+ LN++ I++ I + + KL Q + SRT+ QT+ S +P
Sbjct: 327 EIEPHRLDVNVHPTKREVNFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQTLLPSIQTPK 386
Query: 375 NPSK--DLHLNPSGSKLQKVPV-NKMVRTDSS-DPAGRLHAYVQSKPHTSVASGPNLSAV 430
S+ D P K P N +VRTDS + + S+P ++ +
Sbjct: 387 RSSQVQDADAAPKTPAPTKKPYENSLVRTDSRVRKITSMLSPATSQPPSATLNLEGQLEN 446
Query: 431 RSSVRQRRNLNETAD-------LTSIQELIDDVDRNCHSGLLDIVRHCSFIGMAD--DVY 481
+V + T D LTS++ L V + H L + + +++G+ D
Sbjct: 447 TQTVLDDGLIYTTTDREPLKIALTSVKNLRAAVRSSMHQSLTETIASHTYVGLVDVNRRI 506
Query: 482 ALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVE 541
A +Q +YL + E YQL L F +F IQL P L +LL +A E +L +
Sbjct: 507 AAVQAGVKLYLIDYGMFCAEFFYQLGLTDFGNFGTIQLEPPPKLIDLLHIAA-ESELQ-Q 564
Query: 542 NSENDDLKEKIAEMNTELL 560
SE+ + K +I EL+
Sbjct: 565 ASEDYEEKREIFSAAPELV 583
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 177/510 (34%), Positives = 272/510 (53%)
Query: 153 PKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHG 212
PKA A GTQI VE+LFYN+ RR+ +++S++Y KI+D++ R A+H + V+FSCRKHG
Sbjct: 169 PKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHG 228
Query: 213 AARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAK 272
A + + + +D IR ++G +VA+ LV+ + F G V+N+NY K
Sbjct: 229 DAGVSISTAVALNTIDRIRQIHGSAVANELVEFSVKD----EKLGFTSSGLVTNANYHVK 284
Query: 273 KTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREV 332
+TT++LF+N R VE +KRAVE YA+ PK PF+Y+ + + P +DVNVHPTKREV
Sbjct: 285 RTTILLFINHRSVESTAIKRAVEQTYASFLPKGGHPFVYIDLEIEPHRLDVNVHPTKREV 344
Query: 333 SLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSK--DLHLNPSGSKLQ 390
+ LN++ I++ I + + KL Q + SRT+ QT+ S +P S+ D P
Sbjct: 345 NFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQTLLPSIQTPKRSSQVQDADAAPKTPAPT 404
Query: 391 KVPV-NKMVRTDSS-DPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETAD--- 445
K P N +VRTDS + + S+P ++ + +V + T D
Sbjct: 405 KKPYENSLVRTDSRVRKITSMLSPATSQPPSATLNLEGQLENTQTVLDDGLIYTTTDREP 464
Query: 446 ----LTSIQELIDDVDRNCHSGLLDIVRHCSFIGMAD--DVYALLQHNTHMYLANVVSLS 499
LTS++ L V + H L + + +++G+ D A +Q +YL +
Sbjct: 465 LKIALTSVKNLRAAVRSSMHQSLTETIASHTYVGLVDVNRRIAAVQAGVKLYLIDYGMFC 524
Query: 500 KELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIA---EMN 556
E YQL L F +F IQL P L +LL +A E +L + + ++ +E + E+
Sbjct: 525 AEFFYQLGLTDFGNFGTIQLEPPPKLIDLLHIAA-ESELQQASEDYEEKREIFSAAPELV 583
Query: 557 TELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKC 616
+ L + EML EYF ++I G L +P++L Y P + ++P F+L LG VDW E+
Sbjct: 584 AKTLIDRREMLSEYFSIQISDDGYLLTIPLLLKGYVPCLGKLPRFLLRLGPYVDWTSEEE 643
Query: 617 CFQAIAAALGNFYAMHPPLLPN-PSGEGLQ 645
CF+ A L FY P LP P E L+
Sbjct: 644 CFRTFLAELAAFYT--PEQLPRMPPSEELR 671
>UNIPROTKB|Q5BH54 [details] [associations]
symbol:AN0126.2 "DNA mismatch repair protein Mlh1, putative
(AFU_orthologue; AFUA_5G11700)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 EMBL:BN001308
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACD01000004 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404
RefSeq:XP_657730.1 ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 219/559 (39%), Positives = 326/559 (58%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L+ VVN+IAAGE+I P+ A+KEL+EN++DA +TSI ++VK+GGLKL+Q++D+GHG
Sbjct: 31 IRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLKLLQITDNGHG 90
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I +DLPILCER TTSKL ++EDL SI + GFRGEALAS++++ H+TVTT T +R
Sbjct: 91 IDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEALASISHIAHLTVTTKTADSSCAWR 150
Query: 142 VSYRDGVM-------ESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLL 194
Y DG + + PKA A GTQI VE+LFYN+ RR+ +++S++Y KI+D++
Sbjct: 151 AHYADGKLVPPKPGQSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVV 210
Query: 195 SRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSS 254
R A+H + V+FSCRKHG A + + + +D IR ++G +VA+ LV+ +
Sbjct: 211 GRYAVHCSGVAFSCRKHGDAGVSISTAVALNTIDRIRQIHGSAVANELVEFSVKD----E 266
Query: 255 SFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSI 314
F G V+N+NY K+TT++LF+N R VE +KRAVE YA+ PK PF+Y+ +
Sbjct: 267 KLGFTSSGLVTNANYHVKRTTILLFINHRSVESTAIKRAVEQTYASFLPKGGHPFVYIDL 326
Query: 315 VLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPY 374
+ P +DVNVHPTKREV+ LN++ I++ I + + KL Q + SRT+ QT+ S +P
Sbjct: 327 EIEPHRLDVNVHPTKREVNFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQTLLPSIQTPK 386
Query: 375 NPSK--DLHLNPSGSKLQKVPV-NKMVRTDSS-DPAGRLHAYVQSKPHTSVASGPNLSAV 430
S+ D P K P N +VRTDS + + S+P ++ +
Sbjct: 387 RSSQVQDADAAPKTPAPTKKPYENSLVRTDSRVRKITSMLSPATSQPPSATLNLEGQLEN 446
Query: 431 RSSVRQRRNLNETAD-------LTSIQELIDDVDRNCHSGLLDIVRHCSFIGMAD--DVY 481
+V + T D LTS++ L V + H L + + +++G+ D
Sbjct: 447 TQTVLDDGLIYTTTDREPLKIALTSVKNLRAAVRSSMHQSLTETIASHTYVGLVDVNRRI 506
Query: 482 ALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVE 541
A +Q +YL + E YQL L F +F IQL P L +LL +A E +L +
Sbjct: 507 AAVQAGVKLYLIDYGMFCAEFFYQLGLTDFGNFGTIQLEPPPKLIDLLHIAA-ESELQ-Q 564
Query: 542 NSENDDLKEKIAEMNTELL 560
SE+ + K +I EL+
Sbjct: 565 ASEDYEEKREIFSAAPELV 583
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 177/510 (34%), Positives = 272/510 (53%)
Query: 153 PKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHG 212
PKA A GTQI VE+LFYN+ RR+ +++S++Y KI+D++ R A+H + V+FSCRKHG
Sbjct: 169 PKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHG 228
Query: 213 AARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAK 272
A + + + +D IR ++G +VA+ LV+ + F G V+N+NY K
Sbjct: 229 DAGVSISTAVALNTIDRIRQIHGSAVANELVEFSVKD----EKLGFTSSGLVTNANYHVK 284
Query: 273 KTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREV 332
+TT++LF+N R VE +KRAVE YA+ PK PF+Y+ + + P +DVNVHPTKREV
Sbjct: 285 RTTILLFINHRSVESTAIKRAVEQTYASFLPKGGHPFVYIDLEIEPHRLDVNVHPTKREV 344
Query: 333 SLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSK--DLHLNPSGSKLQ 390
+ LN++ I++ I + + KL Q + SRT+ QT+ S +P S+ D P
Sbjct: 345 NFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQTLLPSIQTPKRSSQVQDADAAPKTPAPT 404
Query: 391 KVPV-NKMVRTDSS-DPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETAD--- 445
K P N +VRTDS + + S+P ++ + +V + T D
Sbjct: 405 KKPYENSLVRTDSRVRKITSMLSPATSQPPSATLNLEGQLENTQTVLDDGLIYTTTDREP 464
Query: 446 ----LTSIQELIDDVDRNCHSGLLDIVRHCSFIGMAD--DVYALLQHNTHMYLANVVSLS 499
LTS++ L V + H L + + +++G+ D A +Q +YL +
Sbjct: 465 LKIALTSVKNLRAAVRSSMHQSLTETIASHTYVGLVDVNRRIAAVQAGVKLYLIDYGMFC 524
Query: 500 KELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIA---EMN 556
E YQL L F +F IQL P L +LL +A E +L + + ++ +E + E+
Sbjct: 525 AEFFYQLGLTDFGNFGTIQLEPPPKLIDLLHIAA-ESELQQASEDYEEKREIFSAAPELV 583
Query: 557 TELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKC 616
+ L + EML EYF ++I G L +P++L Y P + ++P F+L LG VDW E+
Sbjct: 584 AKTLIDRREMLSEYFSIQISDDGYLLTIPLLLKGYVPCLGKLPRFLLRLGPYVDWTSEEE 643
Query: 617 CFQAIAAALGNFYAMHPPLLPN-PSGEGLQ 645
CF+ A L FY P LP P E L+
Sbjct: 644 CFRTFLAELAAFYT--PEQLPRMPPSEELR 671
>DICTYBASE|DDB_G0287393 [details] [associations]
symbol:mlh1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;ISS;IBA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0032407 "MutSalpha
complex binding" evidence=ISS;IBA] [GO:0016887 "ATPase activity"
evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0032390 "MutLbeta
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 dictyBase:DDB_G0287393 Prosite:PS00058
GO:GO:0005524 GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AAFI02000100 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 eggNOG:COG0323 RefSeq:XP_637285.1 HSSP:P23367
ProteinModelPortal:Q54KD8 STRING:Q54KD8 EnsemblProtists:DDB0232418
GeneID:8626116 KEGG:ddi:DDB_G0287393 KO:K08734 OMA:SIQVVVK
ProtClustDB:CLSZ2846671 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 Uniprot:Q54KD8
Length = 884
Score = 547 (197.6 bits), Expect = 3.4e-88, Sum P(2) = 3.4e-88
Identities = 116/260 (44%), Positives = 173/260 (66%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
IHRL + VVN+I+AGEVIQRP +A+KEL+EN LDA +T+I V VKDGG+K +Q+ D+G G
Sbjct: 63 IHRLTQEVVNKISAGEVIQRPSNALKELLENCLDAKSTTITVTVKDGGMKFLQIQDNGSG 122
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
IR ED+ I+CER TTSKL+K+EDL+SI+S GFRGEAL+S+++V H+ + T T YR
Sbjct: 123 IRLEDMGIVCERFTTSKLTKFEDLRSIQSFGFRGEALSSISHVSHLKILTKTADSPCAYR 182
Query: 142 VSYRDGVM--------ESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDL 193
Y +G + S+PK CA V GTQI VE+LF+N +R+ L+N+ D++++IV L
Sbjct: 183 ACYLNGKLTPPSPNEQSSDPKPCAGVNGTQITVEDLFFNTPSRKNVLKNTVDEHSRIVLL 242
Query: 194 LSRMAIHHTNVSFSCRKHGAARADVHSIATSSRL--DSIRTVYGVSVASNL--VQLEASE 249
+ + AI++ VSF +K G +VH+ + L D I ++YG ++ L + ++ +
Sbjct: 243 MKKYAINNPTVSFILKKQGDPTPEVHTSGGQNSLEKDVIGSLYGTDLSKELKIITIDPNN 302
Query: 250 YNDSSSFVFKMDG-YVSNSN 268
N ++ + G + NSN
Sbjct: 303 PNPNNDDDDNISGSQIKNSN 322
Score = 365 (133.5 bits), Expect = 3.4e-88, Sum P(2) = 3.4e-88
Identities = 90/282 (31%), Positives = 142/282 (50%)
Query: 356 NDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQS 415
ND+ + + + +P NP + P SK Q+ + T ++ A +S
Sbjct: 539 NDNLIFNDNSENEAPRDIDNPLSSV--TPIKSKEQRQQQSTTTTTTTTTTT----ATTKS 592
Query: 416 KPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIG 475
S L ++ + +LTSI+ LI + N H GL + C F+G
Sbjct: 593 NSPASKNDIKKLQEHTFITPRKTRKYKQVELTSIKTLISEFQSNVHDGLKEFFNDCVFVG 652
Query: 476 MADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKE 535
D YAL+Q +YL N+ +++KEL YQL L RF+ F++I+ S + LL+++L
Sbjct: 653 CLDHSYALVQFGKKLYLINLENITKELFYQLSLLRFSDFDSIKFSQSLSIYSLLLVSL-- 710
Query: 536 EDLDVEN-SENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPD 594
D + E+D K+KIA+ T+LL K E+L EYF ++I+ G L +P +LD Y P
Sbjct: 711 -DSPLSGWMESDGPKDKIADYLTKLLISKKELLNEYFSIEINEDGELVGIPQVLDHYVPC 769
Query: 595 MDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLL 636
D +P F+L L +V+WE EK CF I + +F+ + P L
Sbjct: 770 TDNLPIFLLKLATEVEWEFEKECFAGIVKEISSFFKIEPSFL 811
Score = 258 (95.9 bits), Expect = 6.5e-77, Sum P(2) = 6.5e-77
Identities = 63/204 (30%), Positives = 107/204 (52%)
Query: 258 FKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLP 317
F M G+ S++NY +KK +LF+N RLV+ LK +E VY+ PK + PF+++ +++P
Sbjct: 328 FTMKGFFSSTNYNSKKINFILFINGRLVDSKNLKTGLEQVYSKYLPKGTHPFMFIRLLVP 387
Query: 318 PEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTV-ESSPSSPYNP 376
P+++DVN+HPTK EV +L++E I+E IQ V+ +L S++S+T+ Q + +
Sbjct: 388 PKNIDVNIHPTKSEVKILHEEQIIEFIQQKVDQELSISSNSKTFSTQILLPGFDQDNVSS 447
Query: 377 SKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHT-SVASGPNLSAVRSSVR 435
S+ N S Q N ++++P R +K S + L A + +
Sbjct: 448 SQKKQKNSQSSSTQTKSTN-----NNNNPTSRKEPIEYAKDKIRSDSKSQTLDAFLNPMD 502
Query: 436 QRRNLNETADLTSIQEL--IDDVD 457
N + + D + DDVD
Sbjct: 503 YNNNNDSSIDDNDGSGIGRYDDVD 526
Score = 37 (18.1 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 382 LNPSGSKLQKVPVNKMVRTDSSDPAGRLH 410
+ PS KL+ VN +T+S+ ++
Sbjct: 806 IEPSFLKLRDTQVNNQQQTNSTTTTNNIN 834
>POMBASE|SPBC1703.04 [details] [associations]
symbol:mlh1 "MutL family protein Mlh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 PomBase:SPBC1703.04 Prosite:PS00058
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0044732
GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 EMBL:D89212 PIR:T43016 PIR:T50317
RefSeq:NP_596199.1 ProteinModelPortal:Q9P7W6 STRING:Q9P7W6
EnsemblFungi:SPBC1703.04.1 GeneID:2539949 KEGG:spo:SPBC1703.04
OrthoDB:EOG43XZBN NextBio:20801092 Uniprot:Q9P7W6
Length = 684
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 217/637 (34%), Positives = 348/637 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L++ V+N+IAAGE+I+RP +A+KEL+ENSLDA +TSI+V++KDGGLKL+Q++D+G G
Sbjct: 9 IRPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSIDVLLKDGGLKLLQITDNGSG 68
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I+Y+DLP LC+R +TSK+ + DLQ +++ GFRGEALAS+++V VTV T +H ++
Sbjct: 69 IQYDDLPYLCQRFSTSKIDNFNDLQHLQTFGFRGEALASISHVAKVTVVTKLSSDIHAWK 128
Query: 142 VSYRDGV-------MESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLL 194
Y DG M P+ CA +GT I E+LFYN+ +R+ L+N S+++ +I+ L+
Sbjct: 129 AFYVDGALAPISPGMSPAPQPCAGKQGTVITAEDLFYNVRSRKSALKNGSEEFRRIMILV 188
Query: 195 SRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSS 254
+ AIH+ VSF+C+K G A + + S+ D IR +YG VAS+L E SS
Sbjct: 189 QKYAIHNDQVSFNCKKVGDTVASLSLSSRLSKADKIRHIYGPRVASHLRDFSLGE-GQSS 247
Query: 255 SFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSI 314
F +G++SN+++ KK+ ++LF+N+RLVE L+ A+E YA K + F+Y+S+
Sbjct: 248 IVGFSANGFISNADFQDKKSNLILFINNRLVESVELRHALEETYAKYLHKGASYFVYLSL 307
Query: 315 VLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPY 374
+ PE +DVNVHP+KR V L + I I + L +++ R+Y Q + S S+
Sbjct: 308 NMSPEQLDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERSYPLQAMIPSISNTK 367
Query: 375 NPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHA---YVQSKPHT----------SV 421
N S K + N +VRTD + + + ++Q + S
Sbjct: 368 NAES------SSQKAVRTYENYLVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEKVDSA 421
Query: 422 ASGPNLSAVRSSVRQRRNLNE--TADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADD 479
S N + ++ + E + DL SI+ L V + H +I+ ++G+
Sbjct: 422 NSNKNATNDIKDLQTEEIVEEGNSIDLESIKSLQKQVINSMHVLATNILTEHKYVGLVCP 481
Query: 480 VYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLM-LALKEEDL 538
+ ++ L VV K L Y L F I L++ E ++ L DL
Sbjct: 482 TRRIAAVQHNIGLY-VVDYGK-LSYHL-------FYQICLTEFGNYGEFVLETPLSISDL 532
Query: 539 -DVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDR 597
++ N + D K + +E T LL + +ML++YF + + + G L+ +P++ +Y P ++
Sbjct: 533 FEIVNGDED--KSE-SEKFTRLLVSRRDMLKDYFSISVTSGGLLTAVPMLSPKYHPPFEQ 589
Query: 598 IPEFVLCLGNDV-DWEDEKCCFQAIAAALGNFYAMHP 633
+P + L DW DEK C I A+ FY P
Sbjct: 590 LPLLISSLTPKFFDWLDEKSCLNGIMKAIAKFYVPLP 626
>UNIPROTKB|Q7RE54 [details] [associations]
symbol:PY05214 "HMLH1 gene product-related" species:73239
"Plasmodium yoelii yoelii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 HSSP:P23367 KO:K08734
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 EMBL:AABL01001642
RefSeq:XP_725646.1 ProteinModelPortal:Q7RE54 STRING:Q7RE54
GeneID:3790985 KEGG:pyo:PY05214 EuPathDB:PlasmoDB:PY05214
Uniprot:Q7RE54
Length = 885
Score = 492 (178.3 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 101/214 (47%), Positives = 149/214 (69%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L + +NRIAAGEVI RP +A+KELVENSLDA++T+I+V + GGLK +Q+ DDG G
Sbjct: 18 IIKLCKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGDG 77
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I +DL I+CER TTSK+S ++D++SIK+ GFRGEALAS+++V ++T+TT + Y
Sbjct: 78 IHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSSSCYT 137
Query: 142 VSYRDGV-MESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
SY+DG + EP AC+ GT I ++LFYNM R KTL N +D+Y K +D+L + +IH
Sbjct: 138 CSYKDGKPTQKEPTACSGKDGTIIRFDDLFYNMKTRLKTL-NHNDEYNKCLDVLQKYSIH 196
Query: 201 HTNVSFSCRKHGAARADVHSIATSSRLDSIRTVY 234
+ +V+F+C+K + D+ + + I +Y
Sbjct: 197 YPHVTFTCKKWLSNVVDLSTYNAGKGIGGIGGIY 230
Score = 235 (87.8 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 70/234 (29%), Positives = 115/234 (49%)
Query: 230 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 289
I+ +YG SV+ L+ + +E +F FK G +S +Y +KK++ + F+NDRLVE
Sbjct: 308 IQKIYGRSVSKELIPIFVNE--KIPTF-FKCYGLISGPSYNSKKSSYIFFINDRLVESNI 364
Query: 290 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 349
LKRA E Y K + P++Y+++ L + VD+NVHPTK+EV L Q+ I I +E
Sbjct: 365 LKRACENQYNNFLGKGNYPWVYLALRLKYDIVDINVHPTKKEVHFLYQDEIATLISKKIE 424
Query: 350 LKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSD-PAGR 408
L+ N+ R+Y TV + LN +G K+ + K +T S+ G
Sbjct: 425 QVLKNINNMRSYNAPTVNLLQTK-------FDLN-TG----KIDIKKEKQTGSNGYSTGY 472
Query: 409 LHAYVQSKPHTSV---ASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRN 459
+ Y S ++ + N S V+ ++ +R + +T + D N
Sbjct: 473 SNGYSNSHSNSHIDGQRGSDNKSGVKKAIDTKRVRTDYKQITLTNYFVKKSDDN 526
Score = 193 (73.0 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 49/203 (24%), Positives = 99/203 (48%)
Query: 432 SSVRQRRNL-NETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHM 490
S++ R L +E ++TSI++L + L + +++ ++G D++++L+Q+ +
Sbjct: 560 SNICYDRKLPSECDEITSIKKLRKICEEKEKKELTECLKNSIYVGPVDNMHSLIQYKEKL 619
Query: 491 YLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEED---LDVENSENDD 547
+ + + KE++YQ +L R + P PL +LL++ L + N N +
Sbjct: 620 LMIKMPLIIKEIIYQSILNRIGKIPPFKFDPPIPLYDLLLVGLNNSYSGFFENPNYANKN 679
Query: 548 LKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGN 607
++ E+ ++ EM +YF + I+ G++ P +Y P + +P L L
Sbjct: 680 IEIVCNELE-QVFYSYEEMYADYFSIVIED-GHIVTFPACCGEYFPGQEFLPLLFLRLAI 737
Query: 608 DVDWEDEKCCFQAIAAALGNFYA 630
+D+E+E C I L NFY+
Sbjct: 738 QIDYENEINCINGICYLLANFYS 760
Score = 48 (22.0 bits), Expect = 7.4e-67, Sum P(3) = 7.4e-67
Identities = 12/54 (22%), Positives = 30/54 (55%)
Query: 330 REVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLN 383
++++L N + + + E+ L + N+ T++ +E+ + YN S+D H++
Sbjct: 511 KQITLTNY-FVKKSDDNKKEITLFEDNEYETFQ---LEAPKPALYNVSQDKHIS 560
>UNIPROTKB|Q7SA79 [details] [associations]
symbol:NCU08309 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00018 Prosite:PS00058 GO:GO:0005739 GO:GO:0005524
InterPro:IPR018247 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 EMBL:AABX02000053
HSSP:P23367 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0000713 GO:GO:0000710 GO:GO:0032139
GO:GO:0000404 RefSeq:XP_962522.1 ProteinModelPortal:Q7SA79
STRING:Q7SA79 EnsemblFungi:EFNCRT00000008399 GeneID:3878663
KEGG:ncr:NCU08309 Uniprot:Q7SA79
Length = 751
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 193/464 (41%), Positives = 290/464 (62%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L+ VVN+IAAGE+I PV A+KEL+EN++DA +TS+ +VVKDGGLKL+Q++D+G G
Sbjct: 31 IRPLDPDVVNKIAAGEIIVAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDNGCG 90
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I +DLPILCER TTSKL K+EDLQSI + GFRGEALAS++++ H+TVTT T+ +R
Sbjct: 91 IDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHIAHLTVTTKTQESNCAWR 150
Query: 142 VSYRDGVM-------ESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLL 194
Y G + +PK A +GTQI VE+LFYN+ RR+ +++SD+Y KI+D++
Sbjct: 151 AHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDEYNKIIDMV 210
Query: 195 SRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSS 254
R A+H ++V+FSC+K+G + + A +S D IR +YG SVA+ L++ S+
Sbjct: 211 GRYAVHCSHVAFSCKKYGESSTSIAIQANASSTDRIRQIYGGSVANELIEYSTSD----D 266
Query: 255 SFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSI 314
+ FK G +N+NY KKTT++LF+N R VE + +++AVE YA+ PK PF+Y+S+
Sbjct: 267 RWGFKAQGLATNANYSLKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPFVYLSL 326
Query: 315 VLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESS---PS 371
+ PE VDVNVHPTKREV+ LN+ I++ I + KL + SRT+ QT+ +
Sbjct: 327 EIAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTSRTFLTQTLLPGGTWSA 386
Query: 372 SPYNPSKDLHLNPSG--SKLQKVPV---NKMVRTDSSDPAGRLHAYVQSKPHTSVASGPN 426
S S SG S +K P + +VRTD++ ++ + + P +++A+G
Sbjct: 387 SDQQASSSTPSKTSGAASGARKTPARNESSLVRTDTN--MRKITSMLP--PASTMAAGSR 442
Query: 427 LSAVRSSVRQRRNLNET-ADLTSIQELIDDVDRNCHSGLLDIVR 469
+ S+ + +N T D+ I+ + V+R + L VR
Sbjct: 443 GDEIPSTSGVKATINGTNMDVEMIK--YETVEREATACRLISVR 484
Score = 277 (102.6 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 90/335 (26%), Positives = 145/335 (43%)
Query: 319 EHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSK 378
EH+ + + L Q L+ SA + + S S+T + +P
Sbjct: 358 EHIRSKLAAVDTSRTFLTQTLLPGGTWSASDQQASSSTPSKT--SGAASGARKTPAR--N 413
Query: 379 DLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVA-SGPNLSAVRSSVRQR 437
+ L + + ++K+ M+ S+ AG + S +G N+
Sbjct: 414 ESSLVRTDTNMRKI--TSMLPPASTMAAGSRGDEIPSTSGVKATINGTNMDVEMIKYETV 471
Query: 438 RNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDV--YALLQHNTHMYLANV 495
L S++EL +V H L +I + +F+G+ D+ A +Q +YL +
Sbjct: 472 EREATACRLISVRELRAEVREEMHHELTEIFANHTFVGIVDERRRLAAIQGGVKLYLVDY 531
Query: 496 VSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEE-----D----LDVENSEND 546
+ E YQL L F +F I+ P L ELL +A + E D +D + +
Sbjct: 532 GRVCYEYFYQLGLTDFGNFGTIRFDPPLDLRELLSMAAESERTATADATGRVDKDGDDEM 591
Query: 547 DLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLG 606
D+ E I E+ + L ++ EML EYF +I G L +P+++ YTP M ++P F+L LG
Sbjct: 592 DVSE-IVELVADQLVERREMLLEYFSFEISPAGELLSIPLLIKGYTPSMAKLPRFLLELG 650
Query: 607 NDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPSG 641
VDW +EK CF+ L FY P LP G
Sbjct: 651 PRVDWSEEKACFEGFLKELAIFYV--PERLPATIG 683
>UNIPROTKB|Q755L3 [details] [associations]
symbol:AFL199C "AFL199Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
EMBL:AE016819 GenomeReviews:AE016819_GR HSSP:P23367 KO:K08734
OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 OrthoDB:EOG43XZBN
GO:GO:0000713 GO:GO:0000710 GO:GO:0032139 GO:GO:0000404
RefSeq:NP_985351.1 ProteinModelPortal:Q755L3 STRING:Q755L3
EnsemblFungi:AAS53175 GeneID:4621576 KEGG:ago:AGOS_AFL199C
PhylomeDB:Q755L3 Uniprot:Q755L3
Length = 771
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 195/510 (38%), Positives = 316/510 (61%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I LE SVVN+IAAGE+I PV+A+KE++ENS+DA AT+++++VKDGG+K++Q+SD+G G
Sbjct: 49 IKALEASVVNKIAAGEIIISPVNALKEMMENSIDAGATNVDILVKDGGIKMLQISDNGCG 108
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I +DLPILCER TTSKL +EDL I++ GFRGEALAS++++ + V T TK + ++
Sbjct: 109 IMKDDLPILCERFTTSKLKSFEDLSRIQTYGFRGEALASISHIARLHVVTKTKENQCAWK 168
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
Y +GVM EPK A GT I+V++LFYN+ +R + L++ S+++ KIVD++ + AIH
Sbjct: 169 AVYENGVMVGEPKPTAGKDGTTILVQDLFYNVPSRLRALRSPSEEFAKIVDVVGKYAIHS 228
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
V FSC+K G + ++ TSS+ D IR V+G V +NLV+++ S D +
Sbjct: 229 DGVGFSCKKFGETQYALNVRGTSSKSDKIRAVFGAPVVANLVEVDISA--DPEHGLTSSS 286
Query: 262 GYVSNSNYVAKKTT-MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEH 320
G ++ ++ KK+ V F+N+RLV C PL+RA+ VY+ PK +KPFIYMS+ + PE+
Sbjct: 287 GQITTPDFNNKKSIPAVFFINNRLVSCDPLRRALSQVYSNFLPKGNKPFIYMSLHITPEN 346
Query: 321 VDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSP-SSPYNPSKD 379
VDVNVHPTKREV L +E ++E+I + + +L Q + SRT+K ++ SS + +
Sbjct: 347 VDVNVHPTKREVRFLYEEELIERIGNLLHERLSQLDTSRTFKPGSLTPGKHSSTVSSAFR 406
Query: 380 LHLNPSGSKLQ-KVPVNKMVRTDSSDPAGRLHAYVQ-SKPHTSVASGPNLSAVRSSVRQR 437
P+ ++ + K N +VRTD S ++ YV+ S+ TS S+ +S+R++
Sbjct: 407 QSATPASTQPKAKRAENMLVRTDGSQ--AKITNYVRASQSSTS-------SSFSTSLRKK 457
Query: 438 RNLNETADLTSIQELIDDVDRNCHSGLLDI--VRHCSFIGMADDVYALLQHN-THMYLAN 494
+ + +L SI E D + + + + + + + ++ Y ++Q T + L +
Sbjct: 458 SHAAASDELGSIGEDSQDTATSMTTSTQEPNHTKSRAILTLLNNEYEVVQRERTEVNLTS 517
Query: 495 VVSLSKEL---MYQLVLRRFAHFNAIQLSD 521
+ +L +E+ M++ + FA + + D
Sbjct: 518 IKTLKQEVDEDMHKELTSVFADMTYVGVVD 547
Score = 242 (90.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 70/237 (29%), Positives = 109/237 (45%)
Query: 401 DSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNC 460
DS D A + Q HT + L V QR +LTSI+ L +VD +
Sbjct: 472 DSQDTATSMTTSTQEPNHTKSRAILTLLNNEYEVVQRERTE--VNLTSIKTLKQEVDEDM 529
Query: 461 HSGLLDIVRHCSFIGMADDVYAL--LQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQ 518
H L + +++G+ D L +QH ++L + SL EL YQ+ L FA+F I
Sbjct: 530 HKELTSVFADMTYVGVVDATRRLASIQHGLKLFLVDYGSLCNELFYQIGLTDFANFGKIY 589
Query: 519 LSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKI--D 576
+ D E LA+ + ++N+ ++ E T+ L EMLE Y+ ++I D
Sbjct: 590 IQDEVENRE--GLAIYQLLSKIDNASQSNILEI-----TQQLWDMREMLENYYSIEICGD 642
Query: 577 ----TRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFY 629
T + +P++L Y P + ++P F+ +G VDW EK C + I L FY
Sbjct: 643 ETDLTNVRIKSVPLLLKDYVPPLSKLPFFLYRMGTKVDWSSEKECLEGILRQLALFY 699
Score = 45 (20.9 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 200 HHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN 251
HH V+ KH AA + AT+S L Y + + S + LEAS N
Sbjct: 13 HHVRVT---EKHSAA---LILNATTSYLQRCVPQYRMHLPSRIKALEASVVN 58
>GENEDB_PFALCIPARUM|PF11_0184 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein
MLH1, putative" species:5833 "Plasmodium falciparum" [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367
KO:K08734 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 RefSeq:XP_001347855.1
ProteinModelPortal:Q8IIJ0 EnsemblProtists:PF11_0184:mRNA
GeneID:810731 KEGG:pfa:PF11_0184 EuPathDB:PlasmoDB:PF3D7_1117800
HOGENOM:HOG000282300 OMA:DNNITCN ProtClustDB:CLSZ2500887
Uniprot:Q8IIJ0
Length = 1016
Score = 495 (179.3 bits), Expect = 2.6e-82, Sum P(3) = 2.6e-82
Identities = 99/214 (46%), Positives = 149/214 (69%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L E +NRIAAGEVI RP +A+KELVENSLDA+++SI++ + GGLK +Q+ DDG G
Sbjct: 50 IIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGDG 109
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I EDL I+CER TTSK+S ++D+++IK+ GFRGEALAS+++V ++T+T+ + Y
Sbjct: 110 IHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEALASISHVSYLTITSKKRNSPFCYT 169
Query: 142 VSYRDGV-MESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
+Y+DG + EP C+ GT I ++LFYNM AR KT+ N +D+Y K +++L + AIH
Sbjct: 170 CNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMPARLKTM-NPNDEYNKCLEVLQKYAIH 228
Query: 201 HTNVSFSCRKHGAARADVHSIATSSRLDSIRTVY 234
+ NVSF+C+K + D+++ + +Y
Sbjct: 229 YPNVSFTCKKWLSNTVDLNTQKVGKGIGGYAGIY 262
Score = 205 (77.2 bits), Expect = 2.6e-82, Sum P(3) = 2.6e-82
Identities = 49/132 (37%), Positives = 74/132 (56%)
Query: 230 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 289
I+ VYG +++ L + E S FK G +SN Y KK + F+NDRLVE
Sbjct: 410 IQKVYGRNISKELSTIFLKE--KSIPTFFKCYGLISNPTYNGKKGCYIFFINDRLVESNI 467
Query: 290 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 349
+K++ E Y+ K + P+IY+S+ L + VD+NVHPTK+EV L QE I I ++
Sbjct: 468 IKKSCENQYSNFLAKGNYPWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQ 527
Query: 350 LKLRQSNDSRTY 361
L+ ++ RT+
Sbjct: 528 EFLKSFHNMRTF 539
Score = 186 (70.5 bits), Expect = 2.6e-82, Sum P(3) = 2.6e-82
Identities = 47/203 (23%), Positives = 93/203 (45%)
Query: 430 VRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTH 489
+ + + R+ E +++SI++L + L + +++ ++G D++++L+Q+
Sbjct: 695 ISNKIYDRKYPCEADEISSIKKLKMICEEKEKKELTECLKNSIYVGPVDNMHSLIQYKEK 754
Query: 490 MYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLK 549
+ L + + KE+ YQ +L R + P PL +LL++A+ + N K
Sbjct: 755 LLLIKMPLIIKEVTYQSILNRLGKIPPFEFDPPIPLYDLLLVAVNNSYSGFYENPNYANK 814
Query: 550 --EKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGN 607
EK+ ++ EM +YF + I+ G + P +Y P + +P L L
Sbjct: 815 NIEKVCNELEQIFYTYNEMYSDYFSIIIED-GCIVTFPACCGEYFPGQEFLPFLFLRLAT 873
Query: 608 DVDWEDEKCCFQAIAAALGNFYA 630
+D+ E C I L NFY+
Sbjct: 874 QIDYSKEINCINGICYLLANFYS 896
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 165 MVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTN 203
M+ N +N A++ L +D+Y K D + A H N
Sbjct: 623 MLYNGDHNGDAKQIDLYEHNDEYNKTYDQTNIRANLHMN 661
>UNIPROTKB|Q8IIJ0 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein MLH1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367 KO:K08734
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
RefSeq:XP_001347855.1 ProteinModelPortal:Q8IIJ0
EnsemblProtists:PF11_0184:mRNA GeneID:810731 KEGG:pfa:PF11_0184
EuPathDB:PlasmoDB:PF3D7_1117800 HOGENOM:HOG000282300 OMA:DNNITCN
ProtClustDB:CLSZ2500887 Uniprot:Q8IIJ0
Length = 1016
Score = 495 (179.3 bits), Expect = 2.6e-82, Sum P(3) = 2.6e-82
Identities = 99/214 (46%), Positives = 149/214 (69%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L E +NRIAAGEVI RP +A+KELVENSLDA+++SI++ + GGLK +Q+ DDG G
Sbjct: 50 IIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGDG 109
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I EDL I+CER TTSK+S ++D+++IK+ GFRGEALAS+++V ++T+T+ + Y
Sbjct: 110 IHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEALASISHVSYLTITSKKRNSPFCYT 169
Query: 142 VSYRDGV-MESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
+Y+DG + EP C+ GT I ++LFYNM AR KT+ N +D+Y K +++L + AIH
Sbjct: 170 CNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMPARLKTM-NPNDEYNKCLEVLQKYAIH 228
Query: 201 HTNVSFSCRKHGAARADVHSIATSSRLDSIRTVY 234
+ NVSF+C+K + D+++ + +Y
Sbjct: 229 YPNVSFTCKKWLSNTVDLNTQKVGKGIGGYAGIY 262
Score = 205 (77.2 bits), Expect = 2.6e-82, Sum P(3) = 2.6e-82
Identities = 49/132 (37%), Positives = 74/132 (56%)
Query: 230 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 289
I+ VYG +++ L + E S FK G +SN Y KK + F+NDRLVE
Sbjct: 410 IQKVYGRNISKELSTIFLKE--KSIPTFFKCYGLISNPTYNGKKGCYIFFINDRLVESNI 467
Query: 290 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 349
+K++ E Y+ K + P+IY+S+ L + VD+NVHPTK+EV L QE I I ++
Sbjct: 468 IKKSCENQYSNFLAKGNYPWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQ 527
Query: 350 LKLRQSNDSRTY 361
L+ ++ RT+
Sbjct: 528 EFLKSFHNMRTF 539
Score = 186 (70.5 bits), Expect = 2.6e-82, Sum P(3) = 2.6e-82
Identities = 47/203 (23%), Positives = 93/203 (45%)
Query: 430 VRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTH 489
+ + + R+ E +++SI++L + L + +++ ++G D++++L+Q+
Sbjct: 695 ISNKIYDRKYPCEADEISSIKKLKMICEEKEKKELTECLKNSIYVGPVDNMHSLIQYKEK 754
Query: 490 MYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLK 549
+ L + + KE+ YQ +L R + P PL +LL++A+ + N K
Sbjct: 755 LLLIKMPLIIKEVTYQSILNRLGKIPPFEFDPPIPLYDLLLVAVNNSYSGFYENPNYANK 814
Query: 550 --EKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGN 607
EK+ ++ EM +YF + I+ G + P +Y P + +P L L
Sbjct: 815 NIEKVCNELEQIFYTYNEMYSDYFSIIIED-GCIVTFPACCGEYFPGQEFLPFLFLRLAT 873
Query: 608 DVDWEDEKCCFQAIAAALGNFYA 630
+D+ E C I L NFY+
Sbjct: 874 QIDYSKEINCINGICYLLANFYS 896
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 165 MVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTN 203
M+ N +N A++ L +D+Y K D + A H N
Sbjct: 623 MLYNGDHNGDAKQIDLYEHNDEYNKTYDQTNIRANLHMN 661
>WB|WBGene00003373 [details] [associations]
symbol:mlh-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 544 (196.6 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 128/334 (38%), Positives = 192/334 (57%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL + VVNR+AAGEV+ RP +A+KELVENSLDA AT I V +++GGLKL+QVSD+G G
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I ED ++CER TSKL K+EDL +K+ GFRGEALAS+++V V + + Y+
Sbjct: 64 IEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 123
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
++ DG M ++ K A GT I +LFYN+ RR + ++ + D L R AIH
Sbjct: 124 ANFLDGKMTADTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEEAKMVNDTLLRFAIHR 183
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+VSF+ R++ A D + + D + + G VA ++ L + +F +
Sbjct: 184 PDVSFALRQNQAG--DFRTKGDGNFRDVVCNLLGRDVADTILPLSLNSTRLKFTFTGHIS 241
Query: 262 GYVSNSNY-VA--KKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIV 315
++++ +A +KT+ +F+N R V C LK ++ V A A F + +
Sbjct: 242 KPIASATAAIAQNRKTSRSFFSVFINGRSVRCDILKHPIDEVLGARQLHAQ--FCALHLQ 299
Query: 316 LPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 349
+ +DVNVHPTK V L +E I+E+I++ E
Sbjct: 300 IDETRIDVNVHPTKNSVIFLEKEEIIEEIRAYFE 333
Score = 178 (67.7 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 44/191 (23%), Positives = 98/191 (51%)
Query: 448 SIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLV 507
SI+ L ++ N L ++ + +F+G + L+Q T +Y + ++ +E YQ+
Sbjct: 504 SIEVLRKEIIANSSQSLREMFKTSTFVGSINVKQVLIQFGTSLYHLDFSTVLREFFYQIS 563
Query: 508 LRRFAHFNAIQLSDPAP-LSELLMLALKEEDLDVENSENDDLKEKIAEMNT--ELLKQKA 564
+ F ++ + +L + P + E+L L L E N ++ + +LL + A
Sbjct: 564 VFSFGNYGSYRLDEEPPAIIEILEL-LGELSTREPNYAAFEVFANVENRFAAEKLLAEHA 622
Query: 565 EMLEEYFCVKIDTRGN----LSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQA 620
++L +YF +K+D N ++ +P ++ + P ++++P + L +VD++DE+ F+
Sbjct: 623 DLLHDYFAIKLDQLENGRLHITEIPSLVHYFVPQLEKLPFLIATLVLNVDYDDEQNTFRT 682
Query: 621 IAAALGNFYAM 631
I A+G+ + +
Sbjct: 683 ICRAIGDLFTL 693
>UNIPROTKB|Q9XU10 [details] [associations]
symbol:mlh-1 "Protein MLH-1" species:6239 "Caenorhabditis
elegans" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0016887
"ATPase activity" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 544 (196.6 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 128/334 (38%), Positives = 192/334 (57%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL + VVNR+AAGEV+ RP +A+KELVENSLDA AT I V +++GGLKL+QVSD+G G
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I ED ++CER TSKL K+EDL +K+ GFRGEALAS+++V V + + Y+
Sbjct: 64 IEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 123
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
++ DG M ++ K A GT I +LFYN+ RR + ++ + D L R AIH
Sbjct: 124 ANFLDGKMTADTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEEAKMVNDTLLRFAIHR 183
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+VSF+ R++ A D + + D + + G VA ++ L + +F +
Sbjct: 184 PDVSFALRQNQAG--DFRTKGDGNFRDVVCNLLGRDVADTILPLSLNSTRLKFTFTGHIS 241
Query: 262 GYVSNSNY-VA--KKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIV 315
++++ +A +KT+ +F+N R V C LK ++ V A A F + +
Sbjct: 242 KPIASATAAIAQNRKTSRSFFSVFINGRSVRCDILKHPIDEVLGARQLHAQ--FCALHLQ 299
Query: 316 LPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 349
+ +DVNVHPTK V L +E I+E+I++ E
Sbjct: 300 IDETRIDVNVHPTKNSVIFLEKEEIIEEIRAYFE 333
Score = 178 (67.7 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 44/191 (23%), Positives = 98/191 (51%)
Query: 448 SIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLV 507
SI+ L ++ N L ++ + +F+G + L+Q T +Y + ++ +E YQ+
Sbjct: 504 SIEVLRKEIIANSSQSLREMFKTSTFVGSINVKQVLIQFGTSLYHLDFSTVLREFFYQIS 563
Query: 508 LRRFAHFNAIQLSDPAP-LSELLMLALKEEDLDVENSENDDLKEKIAEMNT--ELLKQKA 564
+ F ++ + +L + P + E+L L L E N ++ + +LL + A
Sbjct: 564 VFSFGNYGSYRLDEEPPAIIEILEL-LGELSTREPNYAAFEVFANVENRFAAEKLLAEHA 622
Query: 565 EMLEEYFCVKIDTRGN----LSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQA 620
++L +YF +K+D N ++ +P ++ + P ++++P + L +VD++DE+ F+
Sbjct: 623 DLLHDYFAIKLDQLENGRLHITEIPSLVHYFVPQLEKLPFLIATLVLNVDYDDEQNTFRT 682
Query: 621 IAAALGNFYAM 631
I A+G+ + +
Sbjct: 683 ICRAIGDLFTL 693
>UNIPROTKB|B7Z821 [details] [associations]
symbol:MLH1 "cDNA FLJ55289, highly similar to DNA mismatch
repair protein Mlh1" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 UniGene:Hs.195364
HGNC:HGNC:7127 HOVERGEN:HBG006374 ChiTaRS:Mlh1 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 EMBL:AK302807
IPI:IPI01012620 SMR:B7Z821 STRING:B7Z821 Ensembl:ENST00000536378
Uniprot:B7Z821
Length = 460
Score = 391 (142.7 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 445 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 504
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 261 NLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 320
Query: 505 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 564
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 321 QILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 378
Query: 565 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 624
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 379 EMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 438
Query: 625 LGNFYAMHPPLLPNPS 640
FY++ + S
Sbjct: 439 CAMFYSIRKQYISEES 454
Score = 334 (122.6 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 73/167 (43%), Positives = 106/167 (63%)
Query: 260 MDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 319
M+GY+SN+NY KK +LF+N RLVE L++A+E VYAA PK + PF+Y+S+ + P+
Sbjct: 1 MNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQ 60
Query: 320 HVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSP----YN 375
+VDVNVHPTK EV L++E I+E++Q +E KL SN SR Y QT+ + P
Sbjct: 61 NVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMVK 120
Query: 376 PSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ--SKPHTS 420
+ L + + KV ++MVRTDS + +L A++Q SKP +S
Sbjct: 121 STTSLTSSSTSGSSDKVYAHQMVRTDSREQ--KLDAFLQPLSKPLSS 165
Score = 42 (19.8 bits), Expect = 8.3e-30, Sum P(2) = 8.3e-30
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 536 EDLDVENSENDDLKEKIA 553
ED DVE E+D KE A
Sbjct: 234 EDSDVEMVEDDSRKEMTA 251
>UNIPROTKB|I3LT92 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
GeneTree:ENSGT00550000074923 EMBL:CU993803
Ensembl:ENSSSCT00000027443 Uniprot:I3LT92
Length = 687
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 146/345 (42%), Positives = 224/345 (64%)
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY 144
EDL I+CER TTSKL +EDL I + GFRGEALAS+++V HVT+TT T YR Y
Sbjct: 2 EDLDIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYRAHY 61
Query: 145 RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNV 204
DG +++ PK CA +GTQI VE+LFYN+ RRK L+N S++Y KI++++ R +IH++ +
Sbjct: 62 SDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHNSGI 121
Query: 205 SFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYV 264
SFS +K G ADV ++ ++ +D+IR+++G +V+ L+++E + + FKM+GY+
Sbjct: 122 SFSVKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVECED----KTLAFKMNGYI 177
Query: 265 SNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVN 324
SN+NY KK +LF+N R ++ + L+ + VYAA FPK + P + S+ + P++VDVN
Sbjct: 178 SNANYSVKKCIFLLFIN-RNIDSSNLRACIATVYAAYFPKQAHPSLSTSLEISPQNVDVN 236
Query: 325 VHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSP----YNPSKDL 380
VHPTK EV L+++ I+E++Q +E +L SN SRTY QT+ + P + D+
Sbjct: 237 VHPTKHEVHFLHEDSILERVQQHIESRLLGSNASRTYFTQTLLPGLTGPSGEAVKSAADV 296
Query: 381 HLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGP 425
+ +GS KV +MVRTD + +L A++Q S++S P
Sbjct: 297 TPSSTGSG-DKVYAYQMVRTDCREQ--KLDAFLQPASK-SLSSQP 337
Score = 399 (145.5 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 103/353 (29%), Positives = 178/353 (50%)
Query: 290 LKRAVEIVYAATFPKASKPFIYMSIVLP--PEHVDVNVHPTKREVSLLNQELIVEKIQSA 347
+K A ++ ++T K + Y + + +D + P + +S Q ++ E A
Sbjct: 290 VKSAADVTPSST-GSGDKVYAYQMVRTDCREQKLDAFLQPASKSLSSQPQAIVPEDRTDA 348
Query: 348 VELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAG 407
+ RQ + E+ +E P+ +K L ++ K R S P
Sbjct: 349 FGSEARQQD------EEMLEL-PAPSEVAAKHQSLEEDTAERTSDLSEK--RGPPSSPGN 399
Query: 408 RLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDI 467
+ +S V + + +RR +N LTS+ L ++++ H L ++
Sbjct: 400 PRKRHRESSDVEMVEDANRKEMTAACIPRRRIIN----LTSVLTLQEEINERGHETLREM 455
Query: 468 VRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSE 527
+ + SF+G + +AL QH T +YL N LS+EL YQ+++ FA+F ++LS+PAPL +
Sbjct: 456 LHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSEPAPLFD 515
Query: 528 LLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPII 587
L MLAL + +E D KE +AE E LK+KAEML +YF ++ID GNL LP++
Sbjct: 516 LAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLVGLPLL 573
Query: 588 LDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPS 640
+D Y P ++ +P F+L L +V+W++EK CF++++ FY++ + S
Sbjct: 574 IDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRKQYISEES 626
>UNIPROTKB|Q8TTB5 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:188937 "Methanosarcina acetivorans C2A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE010299 GenomeReviews:AE010299_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
RefSeq:NP_615486.1 ProteinModelPortal:Q8TTB5 GeneID:1472414
KEGG:mac:MA0522 ProtClustDB:CLSK449998
BioCyc:MACE188937:GI2O-589-MONOMER Uniprot:Q8TTB5
Length = 656
Score = 494 (179.0 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 120/334 (35%), Positives = 179/334 (53%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L+ +N+IAAGEVI+RP S VKELV+NS+DA AT I + V+ GG I + D+G G
Sbjct: 8 IRILDRDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKHSILIRDNGCG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ D + E+H TSKL++ EDL ++ +MGFRGEALAS+T + V + T L G +
Sbjct: 68 MSKADALLSYEKHATSKLTRIEDLDTVSTMGFRGEALASITAIAKVEILTRPPEELTGTK 127
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+ G ++ A A GT + V+ LFYN ARRK L++ + I D ++R+A+ +
Sbjct: 128 LVIHGGKVQETSDAGTA-PGTSVYVKELFYNTPARRKYLKSDRTELAHITDTVTRLALAN 186
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+SF+ G + + S +S S+ + G A +++ LE Y F++
Sbjct: 187 PGISFTLLSEG--KPVIRSTGSSDLFKSLVNLLGPDTARSMLPLE---YRTED---FEIR 238
Query: 262 GYVSN-SNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEH 320
GYVS + +FVN R V + AV Y PK P +++ L PE
Sbjct: 239 GYVSKPETNRGGSDQLYVFVNTRPVTSRAINMAVREGYYTKIPKGRYPVAVLALTLNPEE 298
Query: 321 VDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQ 354
VDVNVHP K EV ++ + + + AVE L +
Sbjct: 299 VDVNVHPRKAEVRFSREKEVGDAVIRAVEKVLSE 332
Score = 45 (20.9 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 9/44 (20%), Positives = 21/44 (47%)
Query: 466 DIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLR 509
D++ IG +Y L + + + + + + ++Y+ VLR
Sbjct: 465 DLLEDLRIIGQVSKMYILAEKGEDLVIIDQHAAHERVLYEQVLR 508
>TIGR_CMR|CBU_1083 [details] [associations]
symbol:CBU_1083 "DNA mismatch repair protein MutL"
species:227377 "Coxiella burnetii RSA 493" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_820082.2 ProteinModelPortal:Q83CM9 SMR:Q83CM9
GeneID:1208984 KEGG:cbu:CBU_1083 PATRIC:17930897
BioCyc:CBUR227377:GJ7S-1075-MONOMER Uniprot:Q83CM9
Length = 574
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 133/399 (33%), Positives = 211/399 (52%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL + N+IAAGEV++RP S VKEL+ENS+DA A+ I V + GG K I++ DDG G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I EDL + ERH TSK++K +DLQ I ++GFRGEALAS++ V +T+T+ K GYR
Sbjct: 63 IHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYR 122
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+S + + P A +GT I V++LFYN ARRK L++ + ++ I ++ R+A+ H
Sbjct: 123 ISNISHKIMT-PVPAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSH 181
Query: 202 TNVSFSCRKHGAARADVH--SIAT-SSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVF 258
F H + +H S T S + + I+++ G + + +E S+ S
Sbjct: 182 FTTEFLL--HHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQ----SGLTL 235
Query: 259 KMDGYVSNSNYVAKKTTM-VLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLP 317
K GY++ + Y + + ++VN R V + +A+ Y P + + +
Sbjct: 236 K--GYIAEAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQAYHDVLFHGRHPAYVLYLEID 293
Query: 318 PEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYK--EQTVESSPSSPYN 375
P VD+NVHPTK EV + + + + + AV+ L Q+ + + T E +P + +
Sbjct: 294 PAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQAKPGIVHPLPQSTAEYNPITNFA 353
Query: 376 PSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ 414
P+ + + S +Q+ P P G HA Q
Sbjct: 354 PTPLIEGQGNLSLIQEQPAPYTQTIVHKHPLG--HALAQ 390
>UNIPROTKB|Q8F6X4 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:189518 "Leptospira interrogans serovar Lai str. 56601"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 EMBL:AE010300
GenomeReviews:AE010300_GR KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR RefSeq:NP_711356.2 ProteinModelPortal:Q8F6X4
PaxDb:Q8F6X4 GeneID:1150518 KEGG:lil:LA_1175 PATRIC:22383195
ProtClustDB:CLSK573800 BioCyc:LINT189518:GJBB-947-MONOMER
Uniprot:Q8F6X4
Length = 593
Score = 469 (170.2 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 126/392 (32%), Positives = 209/392 (53%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L ++N+IAAGEVI+ S VKEL+ENS+DA AT ++V KDGGL L++++D+G G
Sbjct: 4 IQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGTG 63
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I EDL +RH TSK+ Y+DL+S+ S GFRGEALAS+ V +T+ + TK ++
Sbjct: 64 IEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAWK 123
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
G + SE + GT+I+VE LF+N RRK L++ + KI D ++ A+
Sbjct: 124 TRSVAGKI-SEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182
Query: 202 TNVSFSCRKHGAARADVHSIAT-SSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKM 260
+V F + G +V + T ++ + I ++G + +L+++ ++
Sbjct: 183 EDVRFRLFQDGK---EVFVLPTRENKKERIIDLFGENFRDHLLEVSLERGGIQAT----- 234
Query: 261 DGYVSNSN-YVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 319
GY+S+ + Y + +T +F+N R +E ++ Y P P+ ++ + P
Sbjct: 235 -GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFEIDPS 293
Query: 320 HVDVNVHPTKREVSLLNQE--------LIVEKIQSA-----VELKLRQSNDS-RTYKEQT 365
VDVNVHP KRE+ L+++ LI ++++S+ +ELK R + T+ +
Sbjct: 294 RVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSSTPVSFLELKKRLLKPAPETHSTTS 353
Query: 366 VESSPSSPYNPSKDLHLNPSGSKLQKVPVNKM 397
+ SS NP L SK + +++M
Sbjct: 354 FYQARSSGKNPLLGRELFSGVSKQEGFELDRM 385
Score = 50 (22.7 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 33/146 (22%), Positives = 60/146 (41%)
Query: 405 PAGRLHAYVQSKPHTSVASGPNLSA-VRSSVRQRRN--LNETADLTSIQELIDDVDRNCH 461
PA H+ S P L + S V ++ L+ S+ EL D+ R H
Sbjct: 344 PAPETHSTTSFYQARSSGKNPLLGRELFSGVSKQEGFELDRMGPGVSLSELTDE--RVKH 401
Query: 462 SGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFN-AIQLS 520
S + +H G+ + + L + Y+ + + + + Y+ VLR+ N IQ
Sbjct: 402 SSFVP-KKH---FGVLFETFILAEAEDGFYIIDQHTAHERIRYEEVLRKLEKRNYGIQ-- 455
Query: 521 DPAPLSELLMLALKEEDLDVENSEND 546
P L+ + + K+E D+ N + +
Sbjct: 456 -PL-LTPIRIDVSKQEQEDILNRKKE 479
>UNIPROTKB|Q74BP0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 121/333 (36%), Positives = 184/333 (55%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L E + N+IAAGEV++RP S VKELVEN+LDA I V ++ GG +LI+++DDG G
Sbjct: 5 IRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGCG 64
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ ED + ERH TSK++ +DL S+ ++GFRGEAL S+ V T+ T +G + G
Sbjct: 65 MSREDALMALERHATSKIATDDDLFSLATLGFRGEALPSVASVSRFTLATRERGSIEGTE 124
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+ Y +G E KAC +GT + V NLF+N AR K +++ + + DL++R+A+
Sbjct: 125 I-YAEGGKIREVKACGMAEGTVVSVRNLFFNTPARLKFMKSVETEGGHVADLVTRLALSR 183
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLE-ASEYNDSSSFVFKM 260
V F+C G + + LD + + G +VAS L ++ A+E + V +
Sbjct: 184 PEVRFTCVSDGKT---LFRALDGTLLDRVAALLGKTVASALHPVDLATEGVRVTGLVARP 240
Query: 261 DGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEH 320
D VS S + + ++N R + ++ A+ Y + P + + I + P
Sbjct: 241 D--VSRS----AASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVVLFIEVSPGE 294
Query: 321 VDVNVHPTKREVSLLNQELIVEKIQSAVELKLR 353
VDVNVHPTK EV Q ++ + IQ AVE LR
Sbjct: 295 VDVNVHPTKHEVRFRQQGIVHDVIQGAVEETLR 327
>TIGR_CMR|GSU_2001 [details] [associations]
symbol:GSU_2001 "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 121/333 (36%), Positives = 184/333 (55%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L E + N+IAAGEV++RP S VKELVEN+LDA I V ++ GG +LI+++DDG G
Sbjct: 5 IRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGCG 64
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ ED + ERH TSK++ +DL S+ ++GFRGEAL S+ V T+ T +G + G
Sbjct: 65 MSREDALMALERHATSKIATDDDLFSLATLGFRGEALPSVASVSRFTLATRERGSIEGTE 124
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+ Y +G E KAC +GT + V NLF+N AR K +++ + + DL++R+A+
Sbjct: 125 I-YAEGGKIREVKACGMAEGTVVSVRNLFFNTPARLKFMKSVETEGGHVADLVTRLALSR 183
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLE-ASEYNDSSSFVFKM 260
V F+C G + + LD + + G +VAS L ++ A+E + V +
Sbjct: 184 PEVRFTCVSDGKT---LFRALDGTLLDRVAALLGKTVASALHPVDLATEGVRVTGLVARP 240
Query: 261 DGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEH 320
D VS S + + ++N R + ++ A+ Y + P + + I + P
Sbjct: 241 D--VSRS----AASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVVLFIEVSPGE 294
Query: 321 VDVNVHPTKREVSLLNQELIVEKIQSAVELKLR 353
VDVNVHPTK EV Q ++ + IQ AVE LR
Sbjct: 295 VDVNVHPTKHEVRFRQQGIVHDVIQGAVEETLR 327
>UNIPROTKB|P49850 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AL009126 GenomeReviews:AL009126_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U27343
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR ProtClustDB:PRK00095 PIR:A69663 RefSeq:NP_389587.1
PDB:3GAB PDB:3KDG PDB:3KDK PDBsum:3GAB PDBsum:3KDG PDBsum:3KDK
ProteinModelPortal:P49850 SMR:P49850 IntAct:P49850
EnsemblBacteria:EBBACT00000001153 GeneID:939455 KEGG:bsu:BSU17050
PATRIC:18975217 GenoList:BSU17050 BioCyc:BSUB:BSU17050-MONOMER
EvolutionaryTrace:P49850 Uniprot:P49850
Length = 627
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 142/485 (29%), Positives = 238/485 (49%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + + N+IAAGEV++RP S VKELVEN++DAD+T I + +++ GL I+V D+G G+
Sbjct: 6 QLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGEGME 65
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
ED RH TSK+ DL ++++GFRGEAL S+ V H+ +TT T G G ++
Sbjct: 66 NEDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEITTST-GEGAGTKLV 124
Query: 144 YRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTN 203
+ G + SE ++ + KGT+I+V NLF+N AR K ++ + I D+++R+A+ H
Sbjct: 125 LQGGNIISESRSSSR-KGTEIVVSNLFFNTPARLKYMKTVHTELGNITDVVNRIALAHPE 183
Query: 204 VSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGY 263
VS R HG + + + +YG +VA ++ L S S F++ GY
Sbjct: 184 VSIRLRHHGKNLLQTNGNGDVRHV--LAAIYGTAVAKKMLPLHVS------SLDFEVKGY 235
Query: 264 VSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVD 322
++ A + M VN R ++ PL +AV Y P P ++ I + P VD
Sbjct: 236 IALPEITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVD 295
Query: 323 VNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHL 382
VNVHP+K EV L + + + I+ ++ +Q Q + S + N + +
Sbjct: 296 VNVHPSKLEVRLSKETELHDLIRDGIKDVFKQQQ--LIPSAQVPKKSAPAIKNEQQFITF 353
Query: 383 NPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNE 442
+ + +KVP S P +L + V+ +P + P L + + E
Sbjct: 354 DEKPPE-KKVPEKSTA--PSYSPM-KLSSVVK-EPVDAEEKLPPLQFDAPPIVDQEQTLE 408
Query: 443 TADLTSIQ-ELID-DVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSK 500
+D+++ Q E + + D V IG Y L Q+ +Y+ + + +
Sbjct: 409 VSDVSAEQPETFEQECHEEQPQPASDRVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQE 468
Query: 501 ELMYQ 505
+ Y+
Sbjct: 469 RIKYE 473
>UNIPROTKB|Q8A120 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:226186 "Bacteroides thetaiotaomicron VPI-5482" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE015928 GenomeReviews:AE015928_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
RefSeq:NP_812762.1 ProteinModelPortal:Q8A120 GeneID:1072957
KEGG:bth:BT_3851 PATRIC:21062728 OMA:EEFGNNS ProtClustDB:CLSK823666
BioCyc:BTHE226186:GJXV-3925-MONOMER Uniprot:Q8A120
Length = 640
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 115/332 (34%), Positives = 187/332 (56%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
IH L +SV N+IAAGEVIQRP S +KELVEN++DADA +I+V+V D G IQ+ DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDDGKG 64
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ D + ERH TSK+ + DL ++++MGFRGEALAS+ V V + T + G +
Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRLESEELGTK 124
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+ +ES+ +A + KG+ V+NLF+N+ ARRK L+ +S + + I+ R+A+ H
Sbjct: 125 LVIAGSKVESQ-EAVSCSKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVH 183
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
V+FS + + ++ ++ S I ++G + L+ +E + + + K+
Sbjct: 184 PEVAFSLYSNDS---ELFNLPVSPLRQRILAIFGKKLNQQLLNIEVN------TTMVKIS 234
Query: 262 GYVSNSNYVAKKTT-MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEH 320
GY++ KK FVN R + +AV Y P + ++ + P +
Sbjct: 235 GYIAKPETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPVGEQVSYFIYFEVDPAN 294
Query: 321 VDVNVHPTKREVSLLNQELIVEKIQSAVELKL 352
+DVN+HPTK E+ N++ I + + ++V+ L
Sbjct: 295 IDVNIHPTKTEIKFENEQAIWQILSASVKESL 326
>TIGR_CMR|DET_1195 [details] [associations]
symbol:DET_1195 "DNA mismatch repair protein, MutL/HexB
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552 OMA:FLFINNR
RefSeq:YP_181908.1 ProteinModelPortal:Q3Z791 STRING:Q3Z791
GeneID:3229520 KEGG:det:DET1195 PATRIC:21609425
ProtClustDB:CLSK935583 BioCyc:DETH243164:GJNF-1196-MONOMER
Uniprot:Q3Z791
Length = 566
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 140/442 (31%), Positives = 222/442 (50%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L+++ + RIAAGEVI+RP S VKEL+ENSLDA A ++VV+++GG+ I+VSDDG G
Sbjct: 3 IKLLDKATIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDGCG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I + ++ + ERH TSKLS +ED+ +I S+GFRGEAL S+ V + + T + G
Sbjct: 63 IVFSEVLLAFERHATSKLSSFEDIYAISSLGFRGEALPSIAAVADLEMLTAARTEESGTY 122
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+S G M + A GT I + LF + AR K L+ + +K+ +++ A+ +
Sbjct: 123 LSLSGGEMVKHTRM-ARSPGTTIKLTRLFSRVPARLKFLKTPQHEASKVSEVVLSYALAY 181
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
V F+ G R +++ D++ +YG VAS ++ LE Y S+ +
Sbjct: 182 PEVKFTLSIDG--RNTLNTPGNGKLRDAVLEIYGNDVASKMLDLETDSYRSSA---INIS 236
Query: 262 GYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEH 320
G VS + + ++ FVN RL++ L++A E Y+ P ++I L
Sbjct: 237 GLVSPPEISRSNRNSLHFFVNRRLIQSRALQKAAEQAYSGLLMVGRYPLGVINIWLDGAL 296
Query: 321 VDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDS-RTYKEQTVESSPSSPYNPSKD 379
VDVN+HPTK EV ++ + +Q AV L + + +E +V S+ P
Sbjct: 297 VDVNIHPTKAEVKFSDESAVFTAVQRAVRSVLVEKPPTPHIAEEASVYRQESARQEPIWG 356
Query: 380 LHLNPSGSKLQKV-PVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPN------LSAVRS 432
P+G+ Q PV + +T S P RL + +A GP+ A
Sbjct: 357 ETPKPAGTVQQYFSPVIQSAKT-SVLPLLRLVGQIGGL--YLLAEGPDGLYIIDQHAAHE 413
Query: 433 SVRQRRNLNETADLTSIQELID 454
+R ++T + Q L+D
Sbjct: 414 RIRYEEIASQTPSENARQSLLD 435
>TIGR_CMR|CHY_1396 [details] [associations]
symbol:CHY_1396 "DNA mismatch repair protein HexB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 OMA:IRNGTPM HOGENOM:HOG000256552
RefSeq:YP_360228.1 ProteinModelPortal:Q3ACA6 STRING:Q3ACA6
GeneID:3727331 KEGG:chy:CHY_1396 PATRIC:21275923
BioCyc:CHYD246194:GJCN-1395-MONOMER Uniprot:Q3ACA6
Length = 578
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 120/337 (35%), Positives = 183/337 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL + V+ +IAAGEV++RP S VKELVENSLDA A +INV +++GGL I V DDG G
Sbjct: 4 IKRLPDEVIKKIAAGEVVERPYSVVKELVENSLDAKAQNINVYIEEGGLGKIVVEDDGIG 63
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I E+LP RHTTSK++ ++DL ++S GFRGEAL S+ V +++ + +G +GY
Sbjct: 64 IPPEELPDALLRHTTSKIASFDDLYYLESFGFRGEALYSIAAVSKISIKSRVRGENNGYE 123
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+ G + + + A GT + V +LF+N AR+K L++ + I + +MAI +
Sbjct: 124 LIAHAGEVINLTEVGMAY-GTVVTVSDLFFNTPARKKFLKSGQTEAGLIRQFIEKMAILY 182
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
V FS G + S +L + +G+ NL+ LE F K
Sbjct: 183 PGVKFSLFIDG--KKIYSSAGIQEQLGLLARFWGLE-KGNLLMLEEKL---GEGFFIK-G 235
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
G + V VN RLV+ L +A++ Y + P KP +++ +V+P V
Sbjct: 236 GIALPPAGKPHRKLQVFAVNKRLVKSGILTKAIDDAYESLLPTGLKPLVFLEVVVPGTWV 295
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDS 358
DVNVHP K EV ++++ I +++ + KL + S
Sbjct: 296 DVNVHPQKLEVKFMDEQKIYLDVRTIIRNKLVNAKSS 332
>TIGR_CMR|BA_3904 [details] [associations]
symbol:BA_3904 "DNA mismatch repair protein MutL"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552
RefSeq:NP_846151.1 RefSeq:YP_020542.1 RefSeq:YP_029870.1
ProteinModelPortal:Q81WR4 IntAct:Q81WR4 DNASU:1085120
EnsemblBacteria:EBBACT00000009631 EnsemblBacteria:EBBACT00000015187
EnsemblBacteria:EBBACT00000021815 GeneID:1085120 GeneID:2814810
GeneID:2848877 KEGG:ban:BA_3904 KEGG:bar:GBAA_3904 KEGG:bat:BAS3617
OMA:FLFINNR ProtClustDB:PRK00095
BioCyc:BANT260799:GJAJ-3676-MONOMER
BioCyc:BANT261594:GJ7F-3793-MONOMER Uniprot:Q81WR4
Length = 626
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 128/354 (36%), Positives = 193/354 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L++ + N IAAGEV++RP S VKELVENS+DA++TSI + +++ GL I++ D+G G
Sbjct: 4 IRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGDG 63
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I ED + ERH TSK+ DL I+++GFRGEAL S+ V + + T T G G
Sbjct: 64 IAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITST-GDAPGTH 122
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+ + G + + K A+ KGT I V+NLF+N AR K ++ + I D++ R+A+ H
Sbjct: 123 LIIKGGDIIKQEKT-ASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
VS H + +H+ + ++Y + VA LV +EA +S F K
Sbjct: 182 PEVSLKLF-HNEKKL-LHTSGNGDVRQVLASIYSIQVAKKLVPIEA----ESLDFTIK-- 233
Query: 262 GYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEH 320
GYV+ A + M VN R V L +A++ Y P P ++SI + P
Sbjct: 234 GYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPML 293
Query: 321 VDVNVHPTKREVSLLNQE----LIVEKIQSAVELKLRQSNDS--RTYKEQTVES 368
VDVNVHP K EV ++ LI E +Q+A + K++ D+ T K++ ES
Sbjct: 294 VDVNVHPAKLEVRFSKEQELLKLIEETLQAAFK-KIQLIPDAGVTTKKKEKDES 346
>TIGR_CMR|SO_0601 [details] [associations]
symbol:SO_0601 "DNA mismatch repair protein MutL"
species:211586 "Shewanella oneidensis MR-1" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:NP_716234.1
ProteinModelPortal:Q8EJ70 SMR:Q8EJ70 GeneID:1168468
KEGG:son:SO_0601 PATRIC:23520892 OMA:FTHIDEW Uniprot:Q8EJ70
Length = 631
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 144/434 (33%), Positives = 225/434 (51%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L + N+IAAGEV++RP S VKELVENSLDA A+ I++ + GG KLI++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNGSG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I E+L + RH TSKL +DL++I S GFRGEALAS++ V +T+T+ T ++
Sbjct: 63 IPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQ 122
Query: 142 VSYRDGV-MESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
+Y +GV M + A G+ I V +LF+N ARR+ L++ ++T I + L R+A+
Sbjct: 123 -AYAEGVEMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALV 181
Query: 201 HTNVSFSCRKHGAARADVHSIATSSR-LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFK 259
++ F+ +G + + L + V G A +++E +++D +
Sbjct: 182 RGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRPFADEALRVEC-QHDD-----LR 235
Query: 260 MDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 319
+ GY+ + T +VN RLV + AV +A + +P + + + P
Sbjct: 236 LSGYLQSPWSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQK-AEVEQPGYVLMLDIDPH 294
Query: 320 HVDVNVHPTKREV----SLLNQELIVEKIQSAVEL--KLR------QSNDSRTYKEQTVE 367
VDVNVHP K EV S + I++ +QSA+E +LR Q +DS Y + E
Sbjct: 295 QVDVNVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELRFEPHSPQIDDSSPYVKPETE 354
Query: 368 SSP---SSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSD-PAGRLHAYVQSKPHTSVAS 423
SS S + +K L ++ +G + + ++V SSD P R VQS S+ S
Sbjct: 355 SSAFELQSTESNAKYLGIDTTGERQAEA---RVVEYRSSDMPKMRTGTAVQSNAFGSM-S 410
Query: 424 GPNLSAVRSSVRQR 437
P + SS R
Sbjct: 411 VPRETRSGSSGESR 424
>UNIPROTKB|Q89DE6 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224911 "Bradyrhizobium japonicum USDA 110" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 EMBL:BA000040
GenomeReviews:BA000040_GR HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_774133.1 ProteinModelPortal:Q89DE6 GeneID:1054324
KEGG:bja:blr7493 PATRIC:21198969
BioCyc:BJAP224911:GJEJ-7548-MONOMER Uniprot:Q89DE6
Length = 603
Score = 460 (167.0 bits), Expect = 1.4e-43, P = 1.4e-43
Identities = 126/361 (34%), Positives = 187/361 (51%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
+ +L E VVNRIAAGEV++RP S VKELVEN++DA A+ I+V GG + I ++DDG G
Sbjct: 3 VRQLPEQVVNRIAAGEVVERPASVVKELVENAIDAGASRIDVFTDGGGRRRIGITDDGSG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ +DL + ERH TSKL EDL I+++GFRGEAL S+ V +++TT G H +
Sbjct: 63 MTAKDLALAVERHATSKLDD-EDLLQIRTLGFRGEALPSIGSVARLSITTRHAGEPHAWA 121
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
++ G +SE A GT++ V +LFY AR K L+ + I +++ R+A+
Sbjct: 122 LTVEGGE-KSEIMPAALAHGTRVEVNDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR 180
Query: 202 TNVSFSCRKHGAARADVHSIAT----SSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFV 257
+V+F+ G RA V A + RL + + G S+ +++ A + V
Sbjct: 181 PDVAFTLA--GEERAPVTWAAALPGAAGRLTRLGDILGAEFRSHAIEVHA----EREGIV 234
Query: 258 FKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVL 316
+ GY + A LFVN R V + AV Y+ P+ P + + + L
Sbjct: 235 --VSGYAAAPALTKANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVLALFVTL 292
Query: 317 PPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNP 376
P VD NVHP K EV N L+ I LK + + R + ES+ SS + P
Sbjct: 293 DPREVDANVHPAKTEVRFRNAGLVRALIVHG--LKEALAREGRRTAANSGESALSS-FRP 349
Query: 377 S 377
+
Sbjct: 350 A 350
>TIGR_CMR|CPS_0323 [details] [associations]
symbol:CPS_0323 "DNA mismatch repair protein MutL"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
RefSeq:YP_267089.1 ProteinModelPortal:Q48A24 SMR:Q48A24
STRING:Q48A24 GeneID:3521200 KEGG:cps:CPS_0323 PATRIC:21464033
HOGENOM:HOG000256551 OMA:RMASTHA BioCyc:CPSY167879:GI48-426-MONOMER
Uniprot:Q48A24
Length = 652
Score = 466 (169.1 bits), Expect = 4.8e-43, P = 4.8e-43
Identities = 152/548 (27%), Positives = 252/548 (45%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L + N+IAAGEV++RP S +KEL+ENSLDA ATSI++ V GG+K I+++D+GHGI
Sbjct: 6 LPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGGIKKIKITDNGHGIVK 65
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY 144
E+L + RH TSK+ DL++I S+GFRGEALAS++ V +T+T+ + ++
Sbjct: 66 EELTLALSRHATSKIKSLNDLEAIGSLGFRGEALASISSVARLTLTSKPQSQATAWQAVA 125
Query: 145 RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNV 204
M K A GT I V +LF+N ARRK L+ ++ I +++ R+A+ H V
Sbjct: 126 EGRDMSVNIKPAAHPDGTSIEVLDLFFNTPARRKFLRTEKTEFNHIDEVVRRIALAHFEV 185
Query: 205 SFSCRKHGAARADVHSIATSSR-LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGY 263
SFS +G +T ++ + + V G + V+++ N + G+
Sbjct: 186 SFSLTHNGNTVRQYRMASTHAQCIKRVAMVCGPKFIEHAVEVDCPHDN------MTLSGW 239
Query: 264 VSNSNYVAKKTTMVL-FVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVD 322
++ ++ + + +VN R++ + A+ YA P + P + + L VD
Sbjct: 240 LAKPSFSRSQNDLCYSYVNGRMMRDKLINHAIRQAYADLLPPDTYPAFVLFLQLDHREVD 299
Query: 323 VNVHPTKREVSLLNQELIVEKIQSAVELKLRQS---NDSRTYKEQTVESSPSSPYNPSKD 379
VNVHP+K EV + + I S L + + T + + P Y+
Sbjct: 300 VNVHPSKHEVRFHQSRYVHDFIYSVCHKALTSALAGEELFTTADSDLALVPEQSYS---S 356
Query: 380 LHLNP-SGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASG------PN-LSAVR 431
L N GS P D P ++ S+ TS SG N +S +
Sbjct: 357 LGANDRQGSHSSNTPTLNYPSADYIRPLQHVNDASNSQS-TSSYSGYGQQHKTNAISKIA 415
Query: 432 SSVRQRRNLNETADLTSIQELI--DDVDRNCH--SGLLDIVRHCSFIGMADDVYALLQHN 487
+S Q + +Q D H + L + +F+ + YAL +
Sbjct: 416 ASNYQALMTPDKGSSAQVQNTSGSDQASAQKHETTTLQNSTDQSAFLSVHQPGYALYKTE 475
Query: 488 THMYLANVVSLSKELMYQLVLRRFAHFNAIQLSD-PA------PLSELLMLALKEEDLDV 540
+ + ++ L+K +LV + + N + SD P PL ++L+L E+ L
Sbjct: 476 NGVRVLSLFKLAKSTYGKLVEQSWQ--NKTEQSDCPVECLVSQPLLLPVILSLSEQQLSF 533
Query: 541 ENSENDDL 548
+E + L
Sbjct: 534 VLAEQEIL 541
>UNIPROTKB|Q48P04 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:CP000058 GenomeReviews:CP000058_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 ProtClustDB:PRK00095
HOGENOM:HOG000256551 OMA:ATMACHA RefSeq:YP_272865.1
ProteinModelPortal:Q48P04 SMR:Q48P04 STRING:Q48P04 GeneID:3560497
KEGG:psp:PSPPH_0563 PATRIC:19970177 Uniprot:Q48P04
Length = 648
Score = 463 (168.0 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 146/531 (27%), Positives = 247/531 (46%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L + N+IAAGEV++RP S +KEL+ENSLD+ A I+V V+ G+KL++V DDG G
Sbjct: 23 IELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGGG 82
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I +DLP+ RH TSK+ EDL+ + S+GFRGEALAS++ V +T+T+ T+ ++
Sbjct: 83 ISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQ 142
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
V M + A GT + V +LF+N ARRK L+ ++ + +++ RMA+
Sbjct: 143 VETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALAR 202
Query: 202 TNVSFSCRKHGAARADVHSIAT-SSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKM 260
+V+F R +G +H ++R + + G + +E E N +
Sbjct: 203 FDVAFHLRHNGKTMLSLHEAHDDTARARRVSAICGPGFLEQALPIEI-ERNG-----LHL 256
Query: 261 DGYVSNSNYVAKKTTM-VLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 319
G+V + + + FVN R V + AV Y P + + P
Sbjct: 257 WGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPA 316
Query: 320 HVDVNVHPTKREVSLLNQELIVEKIQSAVELKL---RQSNDSRTYKEQTVESSPSSP--- 373
VDVNVHPTK EV + ++ + + + L R N E P+ P
Sbjct: 317 AVDVNVHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAAEPRPTGPEAG 376
Query: 374 -YNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRS 432
+ P ++ L + + L++ R + AG + Y Q P + SG ++ +S
Sbjct: 377 EFGPQGEMRL--ANNVLEQPQGEPFARPAAGGGAGSGYQY-QYTPRPT--SGVPVAEAQS 431
Query: 433 SVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTH-MY 491
+ R+ +A +S+ E D+ ++ + +Y +L N H +
Sbjct: 432 AYREFFAPLPSAASSSLPESPGDIPPLGYA-----------LAQLKGIY-ILAENAHGLV 479
Query: 492 LANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVEN 542
L ++ + + +MY+ + + A N P + E L ++ +E D E+
Sbjct: 480 LVDMHAAHERIMYERL--KIAMANEGLSGQPLLVPESLAVSQREADCAEEH 528
>UNIPROTKB|A6VD59 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:381754 "Pseudomonas aeruginosa PA7" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:CP000744 GenomeReviews:CP000744_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:YP_001350994.1
ProteinModelPortal:A6VD59 SMR:A6VD59 STRING:A6VD59 GeneID:5355304
KEGG:pap:PSPA7_5675 PATRIC:19832835
BioCyc:PAER381754:GHMY-5681-MONOMER Uniprot:A6VD59
Length = 633
Score = 452 (164.2 bits), Expect = 2.5e-41, P = 2.5e-41
Identities = 110/321 (34%), Positives = 169/321 (52%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L + N+IAAGEV++RP S KEL+ENSLDA A I+V V+ GG+KL++V DDG G
Sbjct: 7 IQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGARRIDVEVEQGGVKLLRVRDDGRG 66
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I +DLP+ RH TSK+ + EDL+ + S+GFRGEALAS++ V +T+T+ T ++
Sbjct: 67 IPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQ 126
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
V M+ + A GT + V +LF+N ARRK L+ ++ + +++ R+A+
Sbjct: 127 VETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALAR 186
Query: 202 TNVSFSCRKHGAARADVHSIATS-SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKM 260
+V+F R +G +H +R + V G + + +E E N +
Sbjct: 187 FDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIEV-ERNG-----LHL 240
Query: 261 DGYVSNSNYVAKKTTMVLF-VNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 319
G+V + + + F VN R+V + AV Y P + + P
Sbjct: 241 WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFVLFFEVDPA 300
Query: 320 HVDVNVHPTKREVSLLNQELI 340
VDVNVHPTK EV + ++
Sbjct: 301 VVDVNVHPTKHEVRFRDSRMV 321
>TIGR_CMR|VC_0345 [details] [associations]
symbol:VC_0345 "DNA mismatch repair protein MutL"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 PIR:A82334 RefSeq:NP_229999.1
ProteinModelPortal:Q9KV13 SMR:Q9KV13 DNASU:2615058 GeneID:2615058
KEGG:vch:VC0345 PATRIC:20079763 OMA:YAEGRDQ Uniprot:Q9KV13
Length = 653
Score = 450 (163.5 bits), Expect = 9.4e-41, P = 9.4e-41
Identities = 113/336 (33%), Positives = 181/336 (53%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L + N+IAAGEV++RP S VKELVENSLDA AT I++ ++ GG KLI++ D+G G
Sbjct: 3 IRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNGSG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I ++L + RH TSK+ +DL++I S+GFRGEALAS++ V +T+T+ T +
Sbjct: 63 IDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEAWS 122
Query: 142 VSYRDGV-MESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
+Y +G M + + A GT + V +LF+N ARRK L+ ++T I +LL R+A+
Sbjct: 123 -AYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIALS 181
Query: 201 HTNVSFSCRKHGAARADVHSIATSSRLDS-IRTVYGVSVASNLVQLEASEYNDSSSFVFK 259
+VSF+ R +G + T + + + V G +++++E K
Sbjct: 182 RFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQG------LK 235
Query: 260 MDGYVSNSNYVAKKTTM-VLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPP 318
+ G+++ +++ + +VN R++ + A+ Y + + I L P
Sbjct: 236 LHGWITTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDP 295
Query: 319 EHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQ 354
VDVNVHP K EV L+ + I A+ L Q
Sbjct: 296 HQVDVNVHPAKHEVRFHQARLVHDFIYQALSSALVQ 331
>UNIPROTKB|P23367 [details] [associations]
symbol:mutL species:83333 "Escherichia coli K-12"
[GO:0006298 "mismatch repair" evidence=IEA;IDA;IMP] [GO:0005524
"ATP binding" evidence=IEA;IDA] [GO:0032300 "mismatch repair
complex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000018 "regulation of DNA recombination" evidence=IMP]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 EMBL:U14003
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:L19346 EMBL:Z11831
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000018 eggNOG:COG0323
EMBL:M63655 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 HOGENOM:HOG000256551
PIR:PH0853 RefSeq:NP_418591.1 RefSeq:YP_492312.1 PDB:1B62 PDB:1B63
PDB:1BKN PDB:1NHH PDB:1NHI PDB:1NHJ PDB:1X9Z PDBsum:1B62
PDBsum:1B63 PDBsum:1BKN PDBsum:1NHH PDBsum:1NHI PDBsum:1NHJ
PDBsum:1X9Z ProteinModelPortal:P23367 SMR:P23367 DIP:DIP-10285N
IntAct:P23367 MINT:MINT-1266937 PRIDE:P23367
EnsemblBacteria:EBESCT00000002603 EnsemblBacteria:EBESCT00000002604
EnsemblBacteria:EBESCT00000002605 EnsemblBacteria:EBESCT00000017847
GeneID:12934482 GeneID:948691 KEGG:ecj:Y75_p4056 KEGG:eco:b4170
PATRIC:32123913 EchoBASE:EB1258 EcoGene:EG11281 OMA:FSHIDEI
BioCyc:EcoCyc:EG11281-MONOMER BioCyc:ECOL316407:JW4128-MONOMER
BioCyc:MetaCyc:EG11281-MONOMER EvolutionaryTrace:P23367
Genevestigator:P23367 Uniprot:P23367
Length = 615
Score = 442 (160.7 bits), Expect = 2.8e-40, P = 2.8e-40
Identities = 113/358 (31%), Positives = 188/358 (52%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L + N+IAAGEV++RP S VKELVENSLDA AT I++ ++ GG KLI++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I+ ++L + RH TSK++ +DL++I S+GFRGEALAS++ V +T+T+ T ++
Sbjct: 63 IKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQ 122
Query: 142 VSYRDGV-MESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
+Y +G M K A GT + V +LFYN ARRK L+ ++ I +++ R+A+
Sbjct: 123 -AYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALA 181
Query: 201 HTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKM 260
+V+ + +G ++ + + R + + + L Q A E+ +
Sbjct: 182 RFDVTINLSHNGKIVRQYRAVPEGGQKE--RRLGAICGTAFLEQALAIEWQHGD---LTL 236
Query: 261 DGYVSNSNYVAKKTTMV--LFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPP 318
G+V++ N+ + +VN R++ + A+ +P + + + P
Sbjct: 237 RGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDP 296
Query: 319 EHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSS-PYN 375
VDVNVHP K EV L+ + I V L+Q ++ + + +P S P N
Sbjct: 297 HQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPEN 354
>TIGR_CMR|NSE_0609 [details] [associations]
symbol:NSE_0609 "DNA mismatch repair protein, MutL/HexB
family" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
RefSeq:YP_506489.1 ProteinModelPortal:Q2GDF7 STRING:Q2GDF7
GeneID:3931746 KEGG:nse:NSE_0609 PATRIC:22681251
ProtClustDB:CLSK2527761 BioCyc:NSEN222891:GHFU-625-MONOMER
Uniprot:Q2GDF7
Length = 652
Score = 436 (158.5 bits), Expect = 5.5e-39, P = 5.5e-39
Identities = 108/348 (31%), Positives = 188/348 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
IH L ++N+IAAGE++++P +AVKELVEN++DA +TSI V +++ G LI+V+D+G G
Sbjct: 3 IHILPIEIINKIAAGEILEKPANAVKELVENAIDAGSTSIKVELEEVGRNLIRVTDNGVG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I EDLP+ E+H TSKL+ +DL I +GFRGEAL S+ + + + G GY
Sbjct: 63 ISREDLPLAIEKHATSKLNT-KDLYDISYLGFRGEALHSIAITSEMKIASCFNGE--GYV 119
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+ + ++ C GT + V LF+N+ + + L++ + + I++LL+R+A+ +
Sbjct: 120 IDAQTKEVKPHHIKC----GTLVEVRKLFHNIPNKLRFLRSEKTELSSIIELLNRLALVN 175
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
N++F +G D + R++ ++ V G N++ ++ + ND +F +
Sbjct: 176 PNIAFELISNGRQVFDYQTATQLKRMEQLK-VLGKEFVENMIHVKHT--NDG---IFG-E 228
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHV 321
++ K+ ++FVN R V+ + + + Y PK + P + I + V
Sbjct: 229 LFLGLPTLTQKRNNCLIFVNGRPVKDSVISSVMRHAYNDYIPKNTYPIAVIFIRVHNNEV 288
Query: 322 DVNVHPTKREVSLLNQELIVEKIQSAVELKLRQS--NDSRTYKEQTVE 367
DVN+HP K EV + ++I + S L Q + S T ++ VE
Sbjct: 289 DVNIHPNKSEVKFRDPQVIRRFLLSVSSRSLLQCGRSTSTTVADRAVE 336
>TIGR_CMR|ECH_0884 [details] [associations]
symbol:ECH_0884 "DNA mismatch repair protein, MutL/HexB
family" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 RefSeq:YP_507679.1 ProteinModelPortal:Q2GFV4
STRING:Q2GFV4 GeneID:3927913 KEGG:ech:ECH_0884 PATRIC:20577170
BioCyc:ECHA205920:GJNR-887-MONOMER Uniprot:Q2GFV4
Length = 673
Score = 423 (154.0 bits), Expect = 6.9e-39, Sum P(2) = 6.9e-39
Identities = 109/327 (33%), Positives = 173/327 (52%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L+ +NRIAAGEVI+ P S VKELVENS+DA AT+I++ ++ GG LI VSD+G GI+
Sbjct: 6 LDPRTINRIAAGEVIECPASVVKELVENSIDAKATAISITIERGGRNLIIVSDNGIGIKK 65
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY 144
ED+ I RH TSKL DL ++S+GFRGE L S+ VG V + + + + + +
Sbjct: 66 EDMEIAFARHATSKLPD-GDLTKVRSLGFRGEGLTSIAAVGKVKMVSKYRDSDTAWLMVF 124
Query: 145 RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNV 204
G E A GT I V +LF+ R K L+ + I+D+++++A+ + NV
Sbjct: 125 EGGEKTQELTPDALSCGTYIEVRDLFFATPNRLKFLRTEKAEVQSIIDMMNKLAMVNHNV 184
Query: 205 SFSCR-KHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGY 263
FS + + + RL I+T+ G+ N + + E ++ GY
Sbjct: 185 MFSLFVDNKQVFKYLTQQSNIDRLSEIKTL-GMEFCKNSLPVNVKEEQ------IQLSGY 237
Query: 264 VSNSNYVAKKTTMVL-FVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVD 322
+ + K++++ FVN R V L AV Y+ K P + + + +P + VD
Sbjct: 238 IGSPTLSRGKSSLIYTFVNSRPVYDNLLIGAVRYAYSDFIEKDKYPVVVLYLDIPCDQVD 297
Query: 323 VNVHPTKREVSLLNQELIVEKIQSAVE 349
NVHP K EV +++L+ + +A++
Sbjct: 298 ANVHPNKSEVRFQDKKLVYRTVVNAIK 324
Score = 54 (24.1 bits), Expect = 6.9e-39, Sum P(2) = 6.9e-39
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 640 SGEGLQCYKKRKPLKNPVDIERY 662
S E +C++ RKPL N D+++Y
Sbjct: 362 SSEFFKCFQNRKPLLNN-DVQKY 383
>POMBASE|SPAC19G12.02c [details] [associations]
symbol:pms1 "MutL family mismatch-repair protein Pms1"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006298 "mismatch repair" evidence=IGI;IMP]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:X96581 PIR:T37989
RefSeq:NP_594417.1 ProteinModelPortal:P54280 STRING:P54280
EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c
HOGENOM:HOG000165474 OMA:LDKPWNC OrthoDB:EOG4FFH9B NextBio:20803632
Uniprot:P54280
Length = 794
Score = 432 (157.1 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 126/432 (29%), Positives = 227/432 (52%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
++ + V++I +G+VI SAVKELVENSLD+ AT+I + K+ G+ I+V D+G GI
Sbjct: 7 IDANTVHKICSGQVITDVASAVKELVENSLDSGATTIEIRFKNYGINSIEVVDNGSGIDA 66
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHL-HGYRVS 143
D + ++H TSK++ +EDL+++++ GFRGEAL+S+ VG V ++T T+ G +++
Sbjct: 67 GDYESIGKKHFTSKITDFEDLEALQTFGFRGEALSSLCAVGQVIISTATQNEAPKGVQLN 126
Query: 144 Y-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHH 201
+G ++ + +GT +MV +LF + RRK L+ N +++K + LL A
Sbjct: 127 LDHEGSLKDK-LTIPFQRGTSVMVNDLFCTLPVRRKLLEKNYKREFSKAISLLQAYATIS 185
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLD---SIRTVYGVSVASNLVQLEASEYNDSSSFVF 258
TN F + ++T+S D +I V+G V+S+L+ +ND
Sbjct: 186 TNKRFMVYHQTKNSGKLLQLSTNSNKDMKLNIMNVFGTKVSSSLIP-----WNDGI---- 236
Query: 259 KMDGYVSNSNYVAKKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIV 315
++GY+S + + + + +LF+N RLV + R ++ V+ + A PF +++
Sbjct: 237 -IEGYISRPHVGSTRASNERQMLFINRRLVNLPKIARVIQEVFKP-YSMAQSPFFAINLR 294
Query: 316 LPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTY-KEQTVESSPSSPY 374
+ +D+NV P K+ V L ++ I+E I+++++ + + + Q++ S S
Sbjct: 295 ITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQNLCESCGHAISCSRSQSIFSYSSQIP 354
Query: 375 NPSKDLHLNPSGSKL-QKVPVNKMVRTDSSD------PAGR--LHAYVQSKPHTSVASGP 425
+ S D + +L Q +P + +D S P R + A Q TSVA G
Sbjct: 355 DSSGD----STDQELPQSIPATESETSDDSSFSYKRSPCKRKLVEATAQPAISTSVAEGA 410
Query: 426 NLSAVRSSVRQR 437
+L+ V + +R
Sbjct: 411 SLAQVSKPLPER 422
>UNIPROTKB|P74925 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243274 "Thermotoga maritima MSB8" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE000512 GenomeReviews:AE000512_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 EMBL:U71053 PIR:H72427
RefSeq:NP_227838.1 ProteinModelPortal:P74925 GeneID:896837
KEGG:tma:TM0022 PATRIC:23934884 OMA:IQTLGFR ProtClustDB:CLSK874928
Uniprot:P74925
Length = 510
Score = 410 (149.4 bits), Expect = 8.1e-38, P = 8.1e-38
Identities = 113/344 (32%), Positives = 174/344 (50%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL ES+V +IAAGEVI P +KELVENSLDA A I V +++GG +++VSD+G G
Sbjct: 3 IKRLPESLVRKIAAGEVIHNPSFVLKELVENSLDAQADRIVVEIENGGKNMVRVSDNGIG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ + E +TTSK+ EDL I++ GFRGEALAS+ V + T T+ +
Sbjct: 63 MTREEALLAIEPYTTSKIESEEDLHRIRTYGFRGEALASIVQVSRAKIVTKTEKDALATQ 122
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
+ G +E E GT + V +LF+N+ RRK+L++S+ + ++ R +
Sbjct: 123 LMIAGGKVE-EISETHRDTGTTVEVRDLFFNLPVRRKSLKSSAIELRMCREMFERFVLVR 181
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
+V F G VHS + + + + + E + S K
Sbjct: 182 NDVDFVFTSDGKI---VHSFPRTQNIFERALLILEDLRKGYITFE----EELSGLRIK-- 232
Query: 262 GYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEH 320
G VS+ + +T +VN R V L + VY PK S P + I + PE
Sbjct: 233 GIVSSREVTRSSRTGEYFYVNGRFVVSEELHEVLMKVY--DLPKRSYPVAVLFIEVNPEE 290
Query: 321 VDVNVHPTKREVSLLNQELIVEKIQSAVELKL-RQSNDSRTYKE 363
+DVN+HP+K V LN+E + + ++ ++ L R+ S Y+E
Sbjct: 291 LDVNIHPSKIVVKFLNEEKVKKSLEETLKRNLARKWYRSVAYEE 334
>UNIPROTKB|A9WJ86 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:324602 "Chloroflexus aurantiacus J-10-fl" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000909 GenomeReviews:CP000909_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:ATMACHA RefSeq:YP_001634752.1 ProteinModelPortal:A9WJ86
STRING:A9WJ86 GeneID:5825934 KEGG:cau:Caur_1133 PATRIC:21413049
ProtClustDB:CLSK975399 BioCyc:CAUR324602:GIXU-1150-MONOMER
Uniprot:A9WJ86
Length = 624
Score = 417 (151.9 bits), Expect = 7.6e-37, P = 7.6e-37
Identities = 112/318 (35%), Positives = 172/318 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L+E++ +IAAGEV++RP S VKEL+EN++DA A I + V+ GGL+ I+V DDG G
Sbjct: 3 IRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDGCG 62
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVT-VTTITKGHLHGY 140
I +++ + RH TSKL +DL +I+++GFRGEAL S+ V V ++ + L G
Sbjct: 63 IPADEIELAFARHATSKLQSADDLWAIRTLGFRGEALPSIASVAQVICISRVADAEL-GV 121
Query: 141 RVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
+ G ++S C GT I V NLFYN RR+ L++ + + I ++ + A+
Sbjct: 122 ELRIAGGEVQSR-LPCGCPVGTTITVRNLFYNTPVRREYLRSEATETGAISAIVQQYALA 180
Query: 201 HTNVSFSCRKHGAARADVHSIATSSRLDSIRTV----YGVSVASNLVQLEASEYNDSSSF 256
+ VSFS G ++ TS D +RTV YG+ V L+ ++A E ++
Sbjct: 181 YPEVSFSLLIDGRM-----ALQTSGDGD-LRTVVVELYGLEVGRALLPVQA-EAGVDETW 233
Query: 257 VFKMDGYVSNSNYV-AKKTTMVLFVNDRLVEC-APLKRAVEIVYAATFPKASKPFIYMSI 314
V ++G +S + + + LF N R ++ L VE Y K P + +
Sbjct: 234 V-AVNGLISPPELTRSSRNYLSLFANRRALQPRGALAAVVENAYHTMLMKGRFPIAILDV 292
Query: 315 VLPPEHVDVNVHPTKREV 332
+ P +DVNVHPTK EV
Sbjct: 293 RVHPAAIDVNVHPTKSEV 310
>TIGR_CMR|SPO_3362 [details] [associations]
symbol:SPO_3362 "DNA mismatch repair protein MutL"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:YP_168558.1 ProteinModelPortal:Q5LN50 GeneID:3194545
KEGG:sil:SPO3362 PATRIC:23380177 Uniprot:Q5LN50
Length = 621
Score = 414 (150.8 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 144/452 (31%), Positives = 210/452 (46%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L+E+ +NRIAAGEV++RP SAVKELVEN++DA AT I + + DGG LI+VSDDG G
Sbjct: 15 IRQLDETAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDLADGGKTLIRVSDDGCG 74
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKG-HLHGY 140
+ + LP+ RH TSK+ DL +I + GFRGEAL S+ VG +T+T+ +G
Sbjct: 75 MTPDQLPLALARHATSKIDG-SDLLNIHTFGFRGEALPSLGSVGRLTITSRARGAEAANI 133
Query: 141 RVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIH 200
RVS G K A GT + + +LF+ AR K ++ + + D + R+A+
Sbjct: 134 RVS---GGRVDPVKPAALRAGTVVELRDLFFATPARLKFMRTDRAEAQAVADTVKRLAMA 190
Query: 201 HTNVSFSCRK---HGAARADVHSIA-TSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
+VSF+ R G R + A T D++R L Q+ E+ D++
Sbjct: 191 EPSVSFTLRDVSGGGEGRLVFRADAETGDLFDALR--------DRLAQVMGREFTDNALR 242
Query: 257 V------FKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPF 309
+ ++ GY + Y LFVN R V L A+ Y + P
Sbjct: 243 IDTMREGLRLYGYAALPTYSRGAAVAQYLFVNGRPVRDKMLTGALRAAYFDFLSRDRHPA 302
Query: 310 IYMSIVLPPEHVDVNVHPTKREVSLLN----QELIVEKIQSAV-ELKLRQSND--SRTYK 362
+ I P VDVNVHP K EV + + LIV ++ A+ E R S T
Sbjct: 303 AALFIDCDPTLVDVNVHPAKSEVRFRDPGVARGLIVSALRHALAEAGHRASTTVAGATLG 362
Query: 363 EQTVESSPSSPYN---PSKDLHLN------PSGSKLQKVPVNKMVRTDSSDPAGRLHAYV 413
E + + Y PS + P ++L +MV + + A R
Sbjct: 363 AMRPEQTGARIYQMDRPSPAARMASHQAQAPGFAELSSSYSGRMVEPEPGEDARRAEEPP 422
Query: 414 QSKPHTSVASGPNLSAVRSSVRQRRNLNETAD 445
P S+ P L A R V + + +TAD
Sbjct: 423 AETPPESL---P-LGAARGQVHENYIIAQTAD 450
>UNIPROTKB|Q9RTR0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243230 "Deinococcus radiodurans R1" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000513
GenomeReviews:AE000513_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
PIR:G75364 RefSeq:NP_295419.1 ProteinModelPortal:Q9RTR0
GeneID:1800018 KEGG:dra:DR_1696 PATRIC:21631024 OMA:ATMACHA
ProtClustDB:CLSK445200 BioCyc:DRAD243230:GH46-2065-MONOMER
Uniprot:Q9RTR0
Length = 547
Score = 393 (143.4 bits), Expect = 8.1e-36, Sum P(2) = 8.1e-36
Identities = 106/331 (32%), Positives = 165/331 (49%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
IH L V IAAGEV+ RP+ V+ELVEN+LDA A+ I + V GGL+ +QV D+G G
Sbjct: 5 IHVLPPHVARLIAAGEVVSRPLDVVRELVENALDAGASRIEIEVDGGGLERVQVRDNGSG 64
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIK--SMGFRGEALASMTYVGHVTVTTITKGHLHG 139
I + +P+ RH TSKL+ + S+ ++GFRGEAL + G + +TT +
Sbjct: 65 IAAQSVPLAPARHATSKLTAGPETGSLSVTTLGFRGEALWAAAQAGELELTTRPAAQVGA 124
Query: 140 YRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAI 199
R+ + +E + A GT + V LF + AR +T +++ + I LL R +
Sbjct: 125 ARLRAQGDAVEVSRTSAPA--GTTVTVSQLFARLPARLRTQASAAAEVRDITALLGRYVL 182
Query: 200 HHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFK 259
HH+ + + G R H A + ++ TVYG A+ ++ L+
Sbjct: 183 HHSALHWRLTVDGDPRL-TH--APADHRGAVATVYGPLSANRVLTLDTPGVR-------- 231
Query: 260 MDGYVSNSNYV-AKKTTMVLFVNDRLVECAP-LKRAVEIVYAATFPKASKPFIYMSIVLP 317
G VS A++ M VN R + P L+RAV YA P + P + + +
Sbjct: 232 --GVVSRPELTRARRDRMHFAVNGRPIVAPPELERAVIDAYAELLPAGTAPLCVLDLTVA 289
Query: 318 PEHVDVNVHPTKREVSLLNQELIVEKIQSAV 348
PE D N+HP K+ V+L + + +++ AV
Sbjct: 290 PEDYDPNIHPAKQVVALADLPAVALRVRDAV 320
Score = 42 (19.8 bits), Expect = 8.1e-36, Sum P(2) = 8.1e-36
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 472 SFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLML 531
+ +G+ ++Y L Q +++ + + + +Y+ + R A L P P ELL L
Sbjct: 355 TLLGVYQELYLLAQGEGDLWVVDAHAAHERALYERLGRELG--TAAPLELPTP--ELLHL 410
>TIGR_CMR|APH_0939 [details] [associations]
symbol:APH_0939 "DNA mismatch repair protein MutL"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000235 GenomeReviews:CP000235_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
RefSeq:YP_505509.1 ProteinModelPortal:Q2GJE2 STRING:Q2GJE2
GeneID:3931281 KEGG:aph:APH_0939 PATRIC:20950598
HOGENOM:HOG000256550 KO:K03572 OMA:IRNGTPM ProtClustDB:CLSK2465330
BioCyc:APHA212042:GHPM-952-MONOMER Uniprot:Q2GJE2
Length = 634
Score = 398 (145.2 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 112/326 (34%), Positives = 166/326 (50%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L +N+IAAGEVI P S VKELVENS+DA A +INV V GG LI VSDDG GI
Sbjct: 6 LSAQTINKIAAGEVIDCPASVVKELVENSIDAGAKTINVHVDKGGRNLISVSDDGCGIAC 65
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY 144
E++ H TSKL DL ++K+MGFRGE L ++ V V + + + +++
Sbjct: 66 EEMEKAFIGHATSKLID-GDLANVKTMGFRGEGLTAVASVARVKMVSKHVDAERAWSITF 124
Query: 145 RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNV 204
G + GT + V +LF+ R K L+ + IVDLL+R+A+ + +
Sbjct: 125 EGGEKTRDLTPGVLSCGTHVEVRDLFFATPTRLKFLRTEKAEMQNIVDLLNRLAMINYTI 184
Query: 205 SFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEAS-EYNDSSSFVFKMDGY 263
+FS R A S ++ ++ + A V E S E N S V ++ G+
Sbjct: 185 AFSLTI--VERQIFKYSAQESLIERLKEMR----AFGEVFCEQSLEINHSIDHV-RVYGH 237
Query: 264 VSNSNYVAKKTTMV-LFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVD 322
+ + K MV FVN R + L AV+ Y PK P + +++ + P +VD
Sbjct: 238 IGLPTFNKSKPGMVHTFVNGRPIYSTLLLGAVKSAYHGLIPKDRHPVVVLALDVMPAYVD 297
Query: 323 VNVHPTKREVSLLNQELIVEKIQSAV 348
VNVHP+K EV ++ L+ + + A+
Sbjct: 298 VNVHPSKMEVRFQDKRLVYKAVLDAL 323
Score = 41 (19.5 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 608 DVDWEDEKCCFQAIAAALG-----NFYAMHPPLLPNPSG 641
+V ++D++ ++A+ ALG N YA P G
Sbjct: 306 EVRFQDKRLVYKAVLDALGEALSSNVYARFSPAATTSEG 344
>UNIPROTKB|Q3KLC2 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:315277 "Chlamydia trachomatis A/HAR-13" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000051 GenomeReviews:CP000051_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
ProtClustDB:PRK00095 RefSeq:YP_328398.1 ProteinModelPortal:Q3KLC2
STRING:Q3KLC2 GeneID:3687613 KEGG:cta:CTA_0625 PATRIC:32023166
OMA:RRGFQKS BioCyc:CTRA315277:GI4C-650-MONOMER Uniprot:Q3KLC2
Length = 576
Score = 391 (142.7 bits), Expect = 4.7e-34, P = 4.7e-34
Identities = 153/530 (28%), Positives = 249/530 (46%)
Query: 24 RLEESV-VNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGI 82
RL +SV VN+I+AGEVI+ S VKEL+ENSLDA A I++ GG I V D+G G+
Sbjct: 9 RLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDNGVGM 68
Query: 83 RYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRV 142
E++P+ +RH TSK++ + D+ S+ S GFRGEAL S+ + + + T G L G +
Sbjct: 69 DPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPSIASISKMEIHTARAGGL-GSKT 127
Query: 143 SYRDGVMESEPKACAAV---KGTQIMVENLFYNMIARRKTLQNSSD-DYTKIVDLLSRMA 198
G EP C +GT I V +LFYN + R++ Q S D I LL
Sbjct: 128 LIEKG----EPVCCEPAPRQQGTTIAVHSLFYN-VPMRQSFQKSPQMDRLAIRRLLENSV 182
Query: 199 IHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVF 258
+ + ++ R +++ ++ + V G S VQ EA + D
Sbjct: 183 LSSEGIGWTWISE--CRQELYVAKKQGFIERVALVLGES----FVQ-EAF-FIDKQQGDL 234
Query: 259 KMDGYVSNSN-YVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLP 317
++ G++ + N + + + LF+N+R VE + + + V YA P P + + LP
Sbjct: 235 RVLGFLGSPNQHRSTRQGQRLFINNRAVESSFISKKVAEAYAWMIPAQRYPIFVLKLFLP 294
Query: 318 PEHVDVNVHPTKREVSLLNQELIVEKIQSAV-ELKLRQSNDSRTYKEQTVESSPSSPYNP 376
P D NVHP K EV LL + I + A+ E LR+S E+TV P+
Sbjct: 295 PMWCDFNVHPQKTEVRLLQEGQISNLLVEAISEALLRRSPSL----EETVLKVPT----- 345
Query: 377 SKDLHLNPSGSKLQKV-PVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVR 435
+ + + G + + P +V S P Y++++ T + S + S+ S V
Sbjct: 346 -EKIPIENEGISVPSIRPA--IVSAPLSCPTFSQQPYLKTEMAT-IVSRDSASSSLSVVE 401
Query: 436 QRRNLNETADLTSIQELIDDVDRNCHSGLLDIVR-HCSFIGMADD-VYALLQHNTHMYLA 493
+ R L + L++D + H + R H ++ + + + + L T + L
Sbjct: 402 KVRFLTSLGKVL----LVEDSE-GVHVVFVQAARKHLFYVSLLSERLESRLACQTFL-LP 455
Query: 494 NVVSLSKELMYQLVLRRFAHFNA--IQLSDPAPLSELLMLA---LKEEDL 538
+ V ++K L + R A I+LS +P S + A ++EE+L
Sbjct: 456 SSVQMTK-LEADFLQMRLEALTALGIELSRISPDSFAIESAPPFIQEEEL 504
>UNIPROTKB|Q69L72 [details] [associations]
symbol:OSJNBa0016G10.12 "Os02g0592300 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555
GO:GO:0016887 GO:GO:0048316 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 STRING:Q69L72
EnsemblPlants:LOC_Os02g37920.1 GeneID:4329835 KEGG:osa:4329835
ProtClustDB:CLSN2689293 Uniprot:Q69L72
Length = 923
Score = 397 (144.8 bits), Expect = 8.6e-34, P = 8.6e-34
Identities = 126/414 (30%), Positives = 203/414 (49%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I + +S V+RI +G+VI SAVKELVENSLDA AT++ V ++ G V+D+G G
Sbjct: 9 IRPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVTLRSYGEDSFTVADNGTG 68
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I + L +H TSK+S + DL S+ + GFRGEAL+S+ +G +TV T TK G R
Sbjct: 69 ISPTNFQALALKHHTSKISDFGDLASVATFGFRGEALSSLCALGKLTVETRTKDEPVGTR 128
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTL-QNSSDDYTKIVDLLSRMAI 199
+ + GV+ E K V GT + VE LF + R K +N +Y K++ LL+ A+
Sbjct: 129 LEFAHSGVVTGERKMARPV-GTAVTVEKLFSTLPVRSKEFSRNIRKEYGKVISLLNAYAL 187
Query: 200 HHTNVSFSCRK---HGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
V C + A + + +SS D+I TV+G++ L +N + S
Sbjct: 188 IAKGVRLVCTNTVGKNSKSAVLRTQGSSSLKDNIITVFGLNTFKCL-----QPFNVTISE 242
Query: 257 VFKMDGYVSNSNYVAKKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 313
++DG++S + + + +VN R V+ + + V +Y ++ K P ++
Sbjct: 243 GCQVDGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAK-QYPVAVLN 301
Query: 314 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE-LKLRQ--SNDSRTYKEQTVESSP 370
+P DVNV P KR++ ++ I+ ++ +E L Q S + ++ E P
Sbjct: 302 FCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVEDPGKEMDP 361
Query: 371 SSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASG 424
+ +D+ L + + M TDS D + V S T VA+G
Sbjct: 362 AID-GSDEDMCLTEKENVSAPENDDDMDETDSDDEVTPENQKVPSSVTTRVATG 414
>UNIPROTKB|F1NQJ2 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IEA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:AADN02023908 EMBL:AADN02023909
IPI:IPI00819916 Ensembl:ENSGALT00000005429 ArrayExpress:F1NQJ2
Uniprot:F1NQJ2
Length = 878
Score = 321 (118.1 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 89/270 (32%), Positives = 144/270 (53%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I R++ V+RI +G+V+ +AVKELVENSLDA AT+I+V +KD G +LI+VSD+G G
Sbjct: 30 IKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGGG 89
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ L +H TSK+ + DL +++ GFRGEAL+S+ + VT++T K G R
Sbjct: 90 VEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSAKVGTR 149
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIH 200
+ + ++ +GT + ++ LF+ + R K Q N +Y K+V +L I
Sbjct: 150 LVFDHNGKITQKAPYPRQQGTTVSIQQLFHTLPVRHKEFQRNIKKEYAKMVQILQAYCII 209
Query: 201 HTNVSFSCRKH-GAAR-ADVHSIATSSRL-DSIRTVYGVSVASNL---VQL---EA--SE 249
V +C G + + V S L ++I V+G +L VQL EA E
Sbjct: 210 SKGVRINCTNQVGQGKKSPVVSTTGGPNLKENIGAVFGKKQLQSLIPFVQLPPNEAVCEE 269
Query: 250 YN----DSSSFVFKMDGYVSNSNYVAKKTT 275
Y D ++ + G++S ++ ++T
Sbjct: 270 YGLKSTDLPEKLYSITGFISRCDHGVGRST 299
Score = 121 (47.7 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 49/205 (23%), Positives = 97/205 (47%)
Query: 257 VFKMDGYVSNSNY-VAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 313
++ + G++S ++ V + TT F+N R + A + + V VY + K PFI ++
Sbjct: 281 LYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHL-YNKHQYPFIVLN 339
Query: 314 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ-SAVEL---KLRQSNDSRTYKE--QTVE 367
I + E VD+NV P KR++ L ++L++ ++ S +E+ + + N ++ + V+
Sbjct: 340 ICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEMFGSDVNKLNVNQNLLDIVGNVK 399
Query: 368 SSPSSPYNPSKDL--HLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQS----KPHTSV 421
+ P P ++ H + V + R S + +Y QS K S
Sbjct: 400 APPGDAEKPWVEMSHHSETENPSSEGKRVMTLSRLRESFSLHQTESYFQSPKKVKQRHSS 459
Query: 422 ASGPNLSAVRSSVR-QRRNLNETAD 445
+ +L + S+VR Q+ L+E ++
Sbjct: 460 SKQLSLDTILSTVRTQKAVLSEDSE 484
>TAIR|locus:2133274 [details] [associations]
symbol:PMS1 "POSTMEIOTIC SEGREGATION 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic
process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431
"seed maturation" evidence=RCA] [GO:0010564 "regulation of cell
cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene
silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP002687 GO:GO:0009555 GO:GO:0016887 GO:GO:0048316
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
HSSP:P54278 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
ProtClustDB:CLSN2689293 EMBL:AY047228 IPI:IPI00544288
RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6
SMR:Q941I6 STRING:Q941I6 PRIDE:Q941I6 EnsemblPlants:AT4G02460.1
GeneID:827997 KEGG:ath:AT4G02460 TAIR:At4g02460 InParanoid:Q941I6
PhylomeDB:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6
Length = 923
Score = 388 (141.6 bits), Expect = 8.9e-33, P = 8.9e-33
Identities = 113/359 (31%), Positives = 179/359 (49%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I + +V++RI +G+VI SAVKELVENSLDA ATSI + ++D G QV D+G G
Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I + +L +H TSKL + DL ++ + GFRGEAL+S+ +G++TV T TK
Sbjct: 77 ISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPVATL 136
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMAI 199
+++ G++ +E K + GT + V LF N+ R K + N +Y K+V LL+ A+
Sbjct: 137 LTFDHSGLLTAEKKTARQI-GTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVSLLNAYAL 195
Query: 200 HHTNVSFSCRKHGAARADVHSIATSSR---LDSIRTVYGVSVASNL--VQLEASEYNDSS 254
V F C + T R D+I TV+G+S ++L V + SE
Sbjct: 196 IAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVSICVSEDCRVE 255
Query: 255 SFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSI 314
F+ K G + N ++ F+N R V+ + + V +Y T + P +
Sbjct: 256 GFLSK-PGQGTGRNLADRQ---YFFINGRPVDMPKVSKLVNELYKDTSSR-KYPVTILDF 310
Query: 315 VLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSP 373
++P D+NV P KR+V ++ ++ ++ + SN S Y E + P
Sbjct: 311 IVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNAS--YIVNRFEENSEQP 367
>UNIPROTKB|F1PNW0 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K10858
GeneTree:ENSGT00530000063289 CTD:5395 EMBL:AAEX03004285
RefSeq:XP_536879.3 Ensembl:ENSCAFT00000024713 GeneID:479751
KEGG:cfa:479751 Uniprot:F1PNW0
Length = 866
Score = 316 (116.3 bits), Expect = 9.2e-33, Sum P(2) = 9.2e-33
Identities = 81/237 (34%), Positives = 134/237 (56%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G+V+ +AVKELVENS+DA AT+I++ +KD G+ I+VSD+G G
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCG 74
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
++ E+ L +H TSK+ + DL +++ GFRGEAL+S+ + VT++T G R
Sbjct: 75 VKEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTR 134
Query: 142 VSY-RDG-VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMA 198
+++ +G +++ P +GT + V+ LFY + R K Q N +Y K+V +L
Sbjct: 135 LAFDHNGKIVQKTPHP--RPRGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYC 192
Query: 199 IHHTNVSFSCRKH-GAARAD--VHSIATSSRLDSIRTVYGVSVASNL---VQLEASE 249
I + SC G R V + +SS ++I +V+G +L VQL S+
Sbjct: 193 IISVGIRISCSNQVGQGRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSD 249
Score = 123 (48.4 bits), Expect = 9.2e-33, Sum P(2) = 9.2e-33
Identities = 71/286 (24%), Positives = 132/286 (46%)
Query: 212 GAARADVHSIATSSRLDSIRTVYGVSVASNL---VQLEAS-----EYNDSSSFV----FK 259
G + V + +SS ++I +V+G +L VQL S EY + + V F
Sbjct: 209 GRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLNRADVLHSRFH 268
Query: 260 MDGYVSNSNY-VAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVL 316
+ G++S+ + V + +T F+N R + A + R V VY + + PFI ++I +
Sbjct: 269 ISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHM-YNRHQYPFIVLNISV 327
Query: 317 PPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSR-TYKEQT---VESSPSS 372
E +D+NV P KR++ L ++L++ +++++ + + SN ++ T +Q +E
Sbjct: 328 DSECIDINVTPDKRQILLQEEKLLLAVLKTSL-IAMFDSNVNKLTVSQQPLLDIEGHVIK 386
Query: 373 PYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ---SKPHTSV--ASGPNL 427
+ D P K Q P + RT+ + + ++ S HT+ + GP
Sbjct: 387 THQAEMD---KPLAEK-QDSPA--LFRTEGEEKRAVTISRLRENFSLRHTTENRSRGPQT 440
Query: 428 SAVRS-SVRQRRNLNETADLTS--IQELIDDVDRNCHSGLLDIVRH 470
R S RQ+R++ L S + D + +C G ++VRH
Sbjct: 441 PESRQISPRQKRHIQLPGALHSPCTPRPVPDTN-SC--GPQEVVRH 483
>UNIPROTKB|F1PNU2 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:TINECED
GeneTree:ENSGT00530000063289 EMBL:AAEX03004285
Ensembl:ENSCAFT00000024721 Uniprot:F1PNU2
Length = 897
Score = 316 (116.3 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 81/237 (34%), Positives = 134/237 (56%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G+V+ +AVKELVENS+DA AT+I++ +KD G+ I+VSD+G G
Sbjct: 46 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCG 105
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
++ E+ L +H TSK+ + DL +++ GFRGEAL+S+ + VT++T G R
Sbjct: 106 VKEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTR 165
Query: 142 VSY-RDG-VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMA 198
+++ +G +++ P +GT + V+ LFY + R K Q N +Y K+V +L
Sbjct: 166 LAFDHNGKIVQKTPHP--RPRGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYC 223
Query: 199 IHHTNVSFSCRKH-GAARAD--VHSIATSSRLDSIRTVYGVSVASNL---VQLEASE 249
I + SC G R V + +SS ++I +V+G +L VQL S+
Sbjct: 224 IISVGIRISCSNQVGQGRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSD 280
Score = 123 (48.4 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 71/286 (24%), Positives = 132/286 (46%)
Query: 212 GAARADVHSIATSSRLDSIRTVYGVSVASNL---VQLEAS-----EYNDSSSFV----FK 259
G + V + +SS ++I +V+G +L VQL S EY + + V F
Sbjct: 240 GRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLNRADVLHSRFH 299
Query: 260 MDGYVSNSNY-VAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVL 316
+ G++S+ + V + +T F+N R + A + R V VY + + PFI ++I +
Sbjct: 300 ISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHM-YNRHQYPFIVLNISV 358
Query: 317 PPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSR-TYKEQT---VESSPSS 372
E +D+NV P KR++ L ++L++ +++++ + + SN ++ T +Q +E
Sbjct: 359 DSECIDINVTPDKRQILLQEEKLLLAVLKTSL-IAMFDSNVNKLTVSQQPLLDIEGHVIK 417
Query: 373 PYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ---SKPHTSV--ASGPNL 427
+ D P K Q P + RT+ + + ++ S HT+ + GP
Sbjct: 418 THQAEMD---KPLAEK-QDSPA--LFRTEGEEKRAVTISRLRENFSLRHTTENRSRGPQT 471
Query: 428 SAVRS-SVRQRRNLNETADLTS--IQELIDDVDRNCHSGLLDIVRH 470
R S RQ+R++ L S + D + +C G ++VRH
Sbjct: 472 PESRQISPRQKRHIQLPGALHSPCTPRPVPDTN-SC--GPQEVVRH 514
>ZFIN|ZDB-GENE-030131-686 [details] [associations]
symbol:pms2 "PMS2 postmeiotic segregation increased
2 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058
ZFIN:ZDB-GENE-030131-686 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GeneTree:ENSGT00530000063289 EMBL:CR932017 IPI:IPI00901265
Ensembl:ENSDART00000111565 Bgee:E7F558 Uniprot:E7F558
Length = 851
Score = 316 (116.3 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 79/238 (33%), Positives = 134/238 (56%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +++ V++I +G+V+ +AVKELVENS+DA AT+++V +KD G++L++VSD+G G
Sbjct: 12 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKG 71
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ ++ L +H TSKL ++ DL +++ GFRGEAL+S+ + ++V T + G R
Sbjct: 72 VEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEALSSLCALSDLSVVTCHESAQIGAR 131
Query: 142 VSY-RDG-VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMA 198
+ Y DG + + P GT + ++ LF + R K Q N +Y+K++ +L
Sbjct: 132 LVYDHDGRLTQCVPHP--RQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSKMIFVLQSYC 189
Query: 199 IHHTNVSFSCRKH-GAA-RADVHSIATSSRL-DSIRTVYGVSVASNLVQLEASEYNDS 253
I T V +C G R+ V + S+ + D+I V+G +L+ NDS
Sbjct: 190 IISTGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGAVFGPKQLQSLIPFRQISPNDS 247
Score = 119 (46.9 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 39/143 (27%), Positives = 72/143 (50%)
Query: 223 TSSRLDSIRTVYGVSVASNLVQLEASEYNDS--SSF----------VFKMDGYVSNSNY- 269
++S D+I V+G +L+ NDS + +F +DG+VS ++
Sbjct: 217 SNSMRDNIGAVFGPKQLQSLIPFRQISPNDSVKEDYGLGGVDVPKDLFNIDGFVSQGDHG 276
Query: 270 VAKKTT--MVLFVNDRLVECAPLK--RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNV 325
V + T F+N R C P+K + V VY + + PF+ ++I + + VDVNV
Sbjct: 277 VGRSATDRQFFFINKR--PCDPVKVSKLVNEVYHM-YNRHQYPFVALNIAVASDCVDVNV 333
Query: 326 HPTKREVSLLNQELIVEKIQSAV 348
P KR++ L ++L++ ++S++
Sbjct: 334 TPDKRQILLQEEKLLLAILKSSL 356
>UNIPROTKB|Q1RMN2 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0051257 "spindle midzone
assembly involved in meiosis" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0045950 "negative regulation of mitotic
recombination" evidence=IEA] [GO:0045190 "isotype switching"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0001673 "male germ
cell nucleus" evidence=IEA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 GO:GO:0005524 GO:GO:0008630
GO:GO:0048477 GO:GO:0007283 GO:GO:0016887 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 GO:GO:0045190 GO:GO:0007131
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
PANTHER:PTHR10073 HOGENOM:HOG000176000 OrthoDB:EOG43N7C7
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
GeneTree:ENSGT00550000074923 EMBL:DAAA02053630 EMBL:DAAA02053631
UniGene:Bt.30133 EMBL:BC114810 IPI:IPI00838277 STRING:Q1RMN2
Ensembl:ENSBTAT00000048965 HOVERGEN:HBG083452 InParanoid:Q1RMN2
Uniprot:Q1RMN2
Length = 233
Score = 358 (131.1 bits), Expect = 4.4e-32, P = 4.4e-32
Identities = 69/160 (43%), Positives = 106/160 (66%)
Query: 472 SFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLML 531
SF+G + +AL QH T +YL N LS+EL YQ+++ FA+F ++LS+PAPL +L ML
Sbjct: 6 SFVGCVNPQWALAQHQTKLYLLNTTRLSEELFYQILVYDFANFGVLRLSEPAPLFDLAML 65
Query: 532 ALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQY 591
AL + +E D KE +AE E LK+KAEML +YF ++ID GNL LP+++D Y
Sbjct: 66 ALDSPESGW--TEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLVGLPLLIDNY 123
Query: 592 TPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAM 631
P ++ +P F+L L +V+W++EK CF++++ FY++
Sbjct: 124 VPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSI 163
>UNIPROTKB|Q7RPM0 [details] [associations]
symbol:PY01438 "DNA mismatch repair protein, C-terminal
domain, putative" species:73239 "Plasmodium yoelii yoelii"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
EMBL:AABL01000381 RefSeq:XP_729204.1 ProteinModelPortal:Q7RPM0
GeneID:3801758 KEGG:pyo:PY01438 EuPathDB:PlasmoDB:PY01438
Uniprot:Q7RPM0
Length = 1157
Score = 372 (136.0 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 101/338 (29%), Positives = 188/338 (55%)
Query: 26 EESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYE 85
+ES+ N I + +VI + VKELVENS+DA AT I V + + G+K+I+VSD+G+GI+
Sbjct: 8 DESIHN-ICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKIIEVSDNGNGIKKI 66
Query: 86 DLPILCERHTTSKLSKYEDLQSI-KSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY 144
+ +C RH TSK+S+++D+ +I ++GFRGEAL S+ + + ++T HGY + +
Sbjct: 67 NFENVCARHATSKISEFDDIHNILDTLGFRGEALNSLCMLSDLCISTKHDEFEHGYLLKF 126
Query: 145 -RDG-VMESEPKACAAVKGTQIMVENLFYNMIARRKTL-QNSSDDYTKIVDLLSRMAIHH 201
+ G ++ EP A ++GT + EN+F N+ R+K L +N ++ L+ + AI +
Sbjct: 127 DKFGKLIHEEP--IARLRGTTVSCENIFKNIPIRKKDLIKNIKSQLNDLLTLMQQYAIIY 184
Query: 202 TNVSFSC----RKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSF 256
+ F + G + +++ + T+ D + Y + N+ L ++N + ++
Sbjct: 185 HEIKFMIFNVVTQKGCTK-NMNMLITNGSDDIKKNFYSIFGKKNIGNL--IDFNITNENW 241
Query: 257 VFKMDGYVSNSNYVAK-KTTMVLFVNDRLVECAP-LKRAVEIVYAATFPKASKPFIYMSI 314
+ K GY+S+SN + K ++N+R + + + + +Y F P I +I
Sbjct: 242 LVK--GYISDSNSGRRDKDLQFYYMNNRPIHVIKNVNKIINTIYRE-FNSRLYPIIIFNI 298
Query: 315 VLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKL 352
+ +++D+NV P KREV + + E+I++ + +KL
Sbjct: 299 LSDSKNIDINVTPDKREVFFTFENELCEEIKTEL-IKL 335
Score = 50 (22.7 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 58/284 (20%), Positives = 109/284 (38%)
Query: 331 EVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSK-DLHL-----NP 384
+++L+N EKI++ + K++ + Y T E + N K DLH+ N
Sbjct: 723 QINLINLTNS-EKIRNTIFKKIKDVEKANNYLCLTDEKEENKYNNLFKNDLHIKQNSNNS 781
Query: 385 SGSKLQKVPVNKM-----VRTDSSDPAGRLHAYVQSK--PHTSVASGPNLSAVRSSV--- 434
+ S P+N + + D+ D + Y +S + N + S +
Sbjct: 782 NSSNSSNKPINGIGNEEDINFDNIDEQKK-DLYFKSNLFKKLKICGQFNKGFILSKIDLL 840
Query: 435 --RQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYL 492
+ N ++ D+ E ++VDR + L I +H + + Y + L
Sbjct: 841 YFKNEDNKSKNNDMNETDEN-ENVDRKNNYALFIIDQHAADEKSNFEKYNKIFTMKSQKL 899
Query: 493 ANVVSLS-KELMYQLVLRRFAHF--NAIQLSDPAPLSELLMLALKEEDLDVENSENDDLK 549
N + L ++ + F F N ++ + E + K + D N EN +
Sbjct: 900 INKIELELSPAQIHIIEKNFVIFLRNGFEIEI---IEEPINKKRKINN-DENNDENIISE 955
Query: 550 EKIAEMNTELLKQ---KAEMLEEYFCVKIDTRGNLSRLPIILDQ 590
E + EM LL ++LE + + +L+ PII D+
Sbjct: 956 ETLMEMKVYLLSLPVFNGKILEVVDFMSL--LHHLTNHPIIFDK 997
>GENEDB_PFALCIPARUM|MAL7P1.145 [details] [associations]
symbol:MAL7P1.145 "mismatch repair protein
pms1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003684 "damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 382 (139.5 bits), Expect = 9.0e-31, Sum P(3) = 9.0e-31
Identities = 102/340 (30%), Positives = 190/340 (55%)
Query: 26 EESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYE 85
EES+ N I + +VI S VKELVENS+DADA+ I + + + G+KLI+V+D+G GI+
Sbjct: 8 EESIHN-ICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGVGIKKI 66
Query: 86 DLPILCERHTTSKLSKYEDLQS-IKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY 144
+ +C RH TSK+ + D+ S + ++GFRGEAL S+ + +V +TT + + H Y + +
Sbjct: 67 NFENICARHATSKIKDFNDIHSSLNTLGFRGEALNSLCMLSNVNITTKNEENDHAYLLKF 126
Query: 145 -RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKT-LQNSSDDYTKIVDLLSRMAIHHT 202
+ G + E + A ++GT + EN+F+N+ R+K ++N + ++ L+ + AI +
Sbjct: 127 DKLGRLYHE-EPIARLRGTTVSCENIFHNIPIRKKDFIKNIKTQVSDLLLLMQQYAIIYH 185
Query: 203 NVSFSCRKHGAARADVHS--IATSSRLDSIR----TVYGVSVASNLVQ--LEASEYNDSS 254
N+ F ++ + + ++ DSI+ ++YG NL++ ++ +E+N
Sbjct: 186 NIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLIEFNIDGNEWN--- 242
Query: 255 SFVFKMDGYVSNSNYVAK-KTTMVLFVNDRLVECAP-LKRAVEIVYAATFPKASKPFIYM 312
+ GY+S+SN + K ++N R + + + + +Y F P I
Sbjct: 243 -----IRGYISDSNSGRRDKDLQFYYINSRPIHILKNVNKLINTIYRE-FNSRLYPIIIC 296
Query: 313 SIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKL 352
+I+ +++D+NV P KREV ++ + E +++A+ +KL
Sbjct: 297 NILSDTKNIDINVTPDKREVFFTFEQEMCEHMKTAL-VKL 335
Score = 42 (19.8 bits), Expect = 9.0e-31, Sum P(3) = 9.0e-31
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 529 LMLALKEED-LDVENSENDDLKEKIAEMNTELLKQ 562
L L ++D + EN N++++ K E+N+ L Q
Sbjct: 505 LSYTLSQKDYIPTENKMNNNIQIKNDELNSSSLFQ 539
Score = 40 (19.1 bits), Expect = 9.0e-31, Sum P(3) = 9.0e-31
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 641 GEGLQCYKKRKPLKNPVDIERYPN 664
G +CYK N ++ E Y N
Sbjct: 1029 GHESECYKTHDNNSNNINCEDYDN 1052
Score = 38 (18.4 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 538 LDVENSENDDLKEKIAEMNTELLKQKAEM------LEEYFCVKIDTRGNL 581
L ++N ++ KE ++MN + + K + EY DT+ N+
Sbjct: 630 LSIDNVMMENNKEHFSDMNNNVYEYKLNNDDTKNNIYEYKLNSDDTKNNI 679
>UNIPROTKB|Q8IBJ3 [details] [associations]
symbol:MAL7P1.145 "Mismatch repair protein pms1 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003684
"damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 382 (139.5 bits), Expect = 9.0e-31, Sum P(3) = 9.0e-31
Identities = 102/340 (30%), Positives = 190/340 (55%)
Query: 26 EESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYE 85
EES+ N I + +VI S VKELVENS+DADA+ I + + + G+KLI+V+D+G GI+
Sbjct: 8 EESIHN-ICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGVGIKKI 66
Query: 86 DLPILCERHTTSKLSKYEDLQS-IKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY 144
+ +C RH TSK+ + D+ S + ++GFRGEAL S+ + +V +TT + + H Y + +
Sbjct: 67 NFENICARHATSKIKDFNDIHSSLNTLGFRGEALNSLCMLSNVNITTKNEENDHAYLLKF 126
Query: 145 -RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKT-LQNSSDDYTKIVDLLSRMAIHHT 202
+ G + E + A ++GT + EN+F+N+ R+K ++N + ++ L+ + AI +
Sbjct: 127 DKLGRLYHE-EPIARLRGTTVSCENIFHNIPIRKKDFIKNIKTQVSDLLLLMQQYAIIYH 185
Query: 203 NVSFSCRKHGAARADVHS--IATSSRLDSIR----TVYGVSVASNLVQ--LEASEYNDSS 254
N+ F ++ + + ++ DSI+ ++YG NL++ ++ +E+N
Sbjct: 186 NIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLIEFNIDGNEWN--- 242
Query: 255 SFVFKMDGYVSNSNYVAK-KTTMVLFVNDRLVECAP-LKRAVEIVYAATFPKASKPFIYM 312
+ GY+S+SN + K ++N R + + + + +Y F P I
Sbjct: 243 -----IRGYISDSNSGRRDKDLQFYYINSRPIHILKNVNKLINTIYRE-FNSRLYPIIIC 296
Query: 313 SIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKL 352
+I+ +++D+NV P KREV ++ + E +++A+ +KL
Sbjct: 297 NILSDTKNIDINVTPDKREVFFTFEQEMCEHMKTAL-VKL 335
Score = 42 (19.8 bits), Expect = 9.0e-31, Sum P(3) = 9.0e-31
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 529 LMLALKEED-LDVENSENDDLKEKIAEMNTELLKQ 562
L L ++D + EN N++++ K E+N+ L Q
Sbjct: 505 LSYTLSQKDYIPTENKMNNNIQIKNDELNSSSLFQ 539
Score = 40 (19.1 bits), Expect = 9.0e-31, Sum P(3) = 9.0e-31
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 641 GEGLQCYKKRKPLKNPVDIERYPN 664
G +CYK N ++ E Y N
Sbjct: 1029 GHESECYKTHDNNSNNINCEDYDN 1052
Score = 38 (18.4 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 538 LDVENSENDDLKEKIAEMNTELLKQKAEM------LEEYFCVKIDTRGNL 581
L ++N ++ KE ++MN + + K + EY DT+ N+
Sbjct: 630 LSIDNVMMENNKEHFSDMNNNVYEYKLNNDDTKNNIYEYKLNSDDTKNNI 679
>UNIPROTKB|O67518 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224324 "Aquifex aeolicus VF5" [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000657
GenomeReviews:AE000657_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300 PIR:D70436
RefSeq:NP_214083.1 ProteinModelPortal:O67518 GeneID:1193141
KEGG:aae:aq_1578 PATRIC:20960208 HOGENOM:HOG000256552 OMA:MVLFIND
ProtClustDB:CLSK2748471 BioCyc:AAEO224324:GJBH-1125-MONOMER
Uniprot:O67518
Length = 425
Score = 295 (108.9 bits), Expect = 2.8e-30, Sum P(3) = 2.8e-30
Identities = 69/198 (34%), Positives = 108/198 (54%)
Query: 33 IAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCE 92
IAAGEVI+ PV VKELVENSLDA AT + V + GG +LI+V D+G GI ED+ +
Sbjct: 14 IAAGEVIESPVDVVKELVENSLDAKATKVEVEIVKGGKRLIRVKDNGTGIHPEDVEKVVL 73
Query: 93 RHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESE 152
+ TSK+ +DL +I + GFRGEAL S++ V + + G + G +
Sbjct: 74 QGATSKIETEKDLMNISTYGFRGEALYSISSVSKFKLRSRFFQEKEGKEIEVEAGNILGT 133
Query: 153 PKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHG 212
+ V GT++ V +LF+N+ RRK L+ + K+++L+ A+ + V F+ G
Sbjct: 134 RRVGMPV-GTEVEVRDLFFNLPVRRKFLKKEDTERRKVLELIKEYALTNPEVEFTLFSEG 192
Query: 213 AARADVHSIATSSRLDSI 230
+ + R++ +
Sbjct: 193 RETLKLKKSSLKERVEEV 210
Score = 88 (36.0 bits), Expect = 2.8e-30, Sum P(3) = 2.8e-30
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 278 LFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQ 337
+F+N R ++ LK + V+ K + + LPP VD NVHP K+EV++L +
Sbjct: 242 VFINKRPIQNKNLKEFLRKVFGY------KTLVVLYAELPPFMVDFNVHPKKKEVNILKE 295
Query: 338 ----ELIVE---KIQSAVELKLRQSNDSRTYK 362
EL+ E K + V++ L Q +TYK
Sbjct: 296 RKFLELVRELAGKEKPIVDIPLSQP--VKTYK 325
Score = 41 (19.5 bits), Expect = 2.8e-30, Sum P(3) = 2.8e-30
Identities = 6/32 (18%), Positives = 18/32 (56%)
Query: 474 IGMADDVYALLQHNTHMYLANVVSLSKELMYQ 505
+G D+ + L++ + ++Y + L + + Y+
Sbjct: 331 LGQMDETFILVKDSEYLYFVDQHLLEERINYE 362
>UNIPROTKB|D3ZZF0 [details] [associations]
symbol:Pms2 "Protein Pms2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 RGD:1305483 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
IPI:IPI00949446 ProteinModelPortal:D3ZZF0
Ensembl:ENSRNOT00000068106 ArrayExpress:D3ZZF0 Uniprot:D3ZZF0
Length = 850
Score = 330 (121.2 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 81/238 (34%), Positives = 132/238 (55%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G+V+ +AVKEL+ENS+DA ATSI++ +KD G+ LI+VSD+G G
Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCG 74
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ L +H TSK+ ++ DL +++ GFRGEAL+S+ + VT++T G R
Sbjct: 75 VEEENFEGLALKHHTSKIREFADLTQVETFGFRGEALSSLCALSDVTISTCHVSASIGTR 134
Query: 142 V--SYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMA 198
+ + +++ P C KGT + V+NLFY + R K Q N +Y K+V +L
Sbjct: 135 LVLDHNGKIIQKTP--CPRPKGTTVSVQNLFYTLPVRHKEFQRNIKKEYAKMVQVLQAYC 192
Query: 199 IHHTNVSFSCRKH---GAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDS 253
I + SC G + V + +S ++I +V+G +LV +DS
Sbjct: 193 IISAGIRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLVPFVQLPPSDS 250
Score = 75 (31.5 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 12/41 (29%), Positives = 29/41 (70%)
Query: 308 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 348
PF+ +++ + E VD+NV P KR++ L ++L++ +++++
Sbjct: 320 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 360
>UNIPROTKB|F1NQJ3 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
EMBL:AADN02023908 EMBL:AADN02023909 IPI:IPI00604396
Ensembl:ENSGALT00000005427 ArrayExpress:F1NQJ3 Uniprot:F1NQJ3
Length = 858
Score = 284 (105.0 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 62/162 (38%), Positives = 99/162 (61%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I R++ V+RI +G+V+ +AVKELVENSLDA AT+I+V +KD G +LI+VSD+G G
Sbjct: 7 IKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGGG 66
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ L +H TSK+ + DL +++ GFRGEAL+S+ + VT++T K G R
Sbjct: 67 VEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSAKVGTR 126
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNS 183
+ + ++ +GT + ++ LF+ + R K Q +
Sbjct: 127 LVFDHNGKITQKAPYPRQQGTTVSIQQLFHTLPVRHKEFQRN 168
Score = 121 (47.7 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 49/205 (23%), Positives = 97/205 (47%)
Query: 257 VFKMDGYVSNSNY-VAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 313
++ + G++S ++ V + TT F+N R + A + + V VY + K PFI ++
Sbjct: 258 LYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHL-YNKHQYPFIVLN 316
Query: 314 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ-SAVEL---KLRQSNDSRTYKE--QTVE 367
I + E VD+NV P KR++ L ++L++ ++ S +E+ + + N ++ + V+
Sbjct: 317 ICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEMFGSDVNKLNVNQNLLDIVGNVK 376
Query: 368 SSPSSPYNPSKDL--HLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQS----KPHTSV 421
+ P P ++ H + V + R S + +Y QS K S
Sbjct: 377 APPGDAEKPWVEMSHHSETENPSSEGKRVMTLSRLRESFSLHQTESYFQSPKKVKQRHSS 436
Query: 422 ASGPNLSAVRSSVR-QRRNLNETAD 445
+ +L + S+VR Q+ L+E ++
Sbjct: 437 SKQLSLDTILSTVRTQKAVLSEDSE 461
>UNIPROTKB|F1SN54 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:CU467085 EMBL:CU582834
Ensembl:ENSSSCT00000017470 Uniprot:F1SN54
Length = 922
Score = 353 (129.3 bits), Expect = 6.9e-29, P = 6.9e-29
Identities = 119/470 (25%), Positives = 227/470 (48%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATSI+V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
D P++ ++ TSK++ +EDL+++ + GFRGEAL S+ V V +TT T +
Sbjct: 63 AVDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASD--NFSTQ 120
Query: 144 Y-RDG---VMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSR 196
Y DG ++ +P +GT + LF N+ R++ T + D+ K+ DLL
Sbjct: 121 YVLDGSGHIISQKPSHLG--QGTTVTALKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLIS 178
Query: 197 MAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
+ V H A + + ++ ++ +V G +V N+ EA +Y+ S
Sbjct: 179 YGVLKPEVRLVFI-HNKAIIWQKTRVSDHKM-ALMSVLGTAVMGNM---EAFQYHSEESQ 233
Query: 257 VFKMDGYVSNSNYVAKKTTM------VLFVNDRLVECAPLKRAVEIVYAATFPKASK--- 307
++ + G++ N T++ +F+N R V + + + Y K +
Sbjct: 234 IY-LSGFLPKHNADHSVTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKETTRLY 292
Query: 308 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYK-EQTV 366
P ++ I +P VDVN+ P K +V L N+E ++ +++ + + +Y+ ++T
Sbjct: 293 PIFFLKIDVPTVDVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGSLPSTNSYESDKTD 352
Query: 367 ESSPSSPYNPSKD---LHLNPSGSKLQKVPVNKMV-RTD-SSDPAGRLHAY-VQSKPHTS 420
SS + N + + L + G+ V + ++ + D D +G + V + H +
Sbjct: 353 VSSADTVVNKATETDVLFMETCGNNYPNVDTSAILFQNDVHDDKSGNNTDFCVDPQIHVA 412
Query: 421 VASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRH 470
G + ++ SS+ +N ++ + ++ L + + L+D V H
Sbjct: 413 DHFGDHFNSENSSID--KNTSQGIPMNNLP-LKNTQKEYSETRLVDSVEH 459
>FB|FBgn0011660 [details] [associations]
symbol:Pms2 "Pms2" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032407 "MutSalpha complex binding"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 EMBL:AE013599 GO:GO:0005524
GO:GO:0005875 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
KO:K10858 GeneTree:ENSGT00530000063289 CTD:5395 RefSeq:NP_477023.1
UniGene:Dm.4816 ProteinModelPortal:A1ZA03 SMR:A1ZA03 STRING:A1ZA03
PaxDb:A1ZA03 PRIDE:A1ZA03 EnsemblMetazoa:FBtr0087388 GeneID:36705
KEGG:dme:Dmel_CG8169 UCSC:CG8169-RA FlyBase:FBgn0011660
InParanoid:A1ZA03 OMA:GQGKRST OrthoDB:EOG4FJ6QW PhylomeDB:A1ZA03
GenomeRNAi:36705 NextBio:799969 Bgee:A1ZA03 Uniprot:A1ZA03
Length = 899
Score = 294 (108.6 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 70/231 (30%), Positives = 126/231 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I + + V++I +G+V+ AVKELVENS+DA AT + + +KD GL+ ++VSD+G G
Sbjct: 27 IKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNGSG 86
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ +L + ++ TSK+ ++ DL +++ GFRGEAL+S+ + + + T K G +
Sbjct: 87 VEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGVK 146
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTL-QNSSDDYTKIVDLLSRMAI 199
V +G ++ CA GT +++ NLF + RR+ +N ++TK+ +L +
Sbjct: 147 VELDHEGRIKKR-SPCARGVGTTVLLANLFSTLPVRRRDFTRNIKKEFTKMCQILQAYCL 205
Query: 200 HHTNVSFSCRKH---GAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEA 247
V C H GA + + + +I ++G A++LV L++
Sbjct: 206 VTKGVRILCSNHTPKGAKTIVLQTHGDQEVMANISAIFGARQAADLVPLKS 256
Score = 108 (43.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 26/87 (29%), Positives = 50/87 (57%)
Query: 258 FKMDGYVSNSNYVAKKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSI 314
F+++G++S+ + A +++ FVN R + + + + VY + +PFIY++I
Sbjct: 299 FQLEGFISSCRHGAGRSSRDRQFFFVNSRPCDPKNIAKVMNEVYHR-YNVQQQPFIYLNI 357
Query: 315 VLPPEHVDVNVHPTKREVSLLNQELIV 341
+ VDVN+ P KR++ L+N E I+
Sbjct: 358 ITARSDVDVNLTPDKRQL-LINNERIL 383
>ASPGD|ASPL0000093218 [details] [associations]
symbol:AN11853 species:162425 "Emericella nidulans"
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 353 (129.3 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 109/354 (30%), Positives = 172/354 (48%)
Query: 34 AAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCER 93
++G+VI S +KELVENSLDA ATSI V ++ GL LI+V D+G GI E+ + +
Sbjct: 11 SSGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALK 70
Query: 94 HTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHL-HGYRVSYRDGVMESE 152
H TSKLS Y+DL +++ GFRGEAL+S+ + +TT R+ + +
Sbjct: 71 HYTSKLSSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRK 130
Query: 153 PKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH 211
+ A KGT VE+LF + RR+ L+ N +Y K+++LL A T V F+ K+
Sbjct: 131 TEVVAGQKGTVASVESLFRKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRFTI-KN 189
Query: 212 GAARADVHSIATSSR---LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSN 268
A+ V AT+ ++I VYG L+ L+ + S M G ++
Sbjct: 190 TQAKKTVVVFATNGNPTTKENIANVYGAKTLLALIPLDLELQFEPSVAETMMAGDKKSNI 249
Query: 269 YVAKKTTMVLF-----VNDR---LVECAP--LKRAVEIVYAA--TFPKASKPFIYMSIVL 316
V + +F DR V P L + + + +F A PF++ +
Sbjct: 250 QVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQSPFVFADFHM 309
Query: 317 PPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSP 370
DVNV P KR + L + ++E ++ +++ KL +S D + Q + P
Sbjct: 310 DTNAYDVNVSPDKRTILLHDAGALIESLKQSLQ-KLFESADQTVPQSQILGKLP 362
>ASPGD|ASPL0000095187 [details] [associations]
symbol:AN11854 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 353 (129.3 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 109/354 (30%), Positives = 172/354 (48%)
Query: 34 AAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCER 93
++G+VI S +KELVENSLDA ATSI V ++ GL LI+V D+G GI E+ + +
Sbjct: 11 SSGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALK 70
Query: 94 HTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHL-HGYRVSYRDGVMESE 152
H TSKLS Y+DL +++ GFRGEAL+S+ + +TT R+ + +
Sbjct: 71 HYTSKLSSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRK 130
Query: 153 PKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH 211
+ A KGT VE+LF + RR+ L+ N +Y K+++LL A T V F+ K+
Sbjct: 131 TEVVAGQKGTVASVESLFRKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRFTI-KN 189
Query: 212 GAARADVHSIATSSR---LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSN 268
A+ V AT+ ++I VYG L+ L+ + S M G ++
Sbjct: 190 TQAKKTVVVFATNGNPTTKENIANVYGAKTLLALIPLDLELQFEPSVAETMMAGDKKSNI 249
Query: 269 YVAKKTTMVLF-----VNDR---LVECAP--LKRAVEIVYAA--TFPKASKPFIYMSIVL 316
V + +F DR V P L + + + +F A PF++ +
Sbjct: 250 QVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQSPFVFADFHM 309
Query: 317 PPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSP 370
DVNV P KR + L + ++E ++ +++ KL +S D + Q + P
Sbjct: 310 DTNAYDVNVSPDKRTILLHDAGALIESLKQSLQ-KLFESADQTVPQSQILGKLP 362
>UNIPROTKB|Q5AZG4 [details] [associations]
symbol:AN6316.2 "ATP-binding protein (Eurofung)"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 353 (129.3 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 109/354 (30%), Positives = 172/354 (48%)
Query: 34 AAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCER 93
++G+VI S +KELVENSLDA ATSI V ++ GL LI+V D+G GI E+ + +
Sbjct: 11 SSGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALK 70
Query: 94 HTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHL-HGYRVSYRDGVMESE 152
H TSKLS Y+DL +++ GFRGEAL+S+ + +TT R+ + +
Sbjct: 71 HYTSKLSSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRK 130
Query: 153 PKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH 211
+ A KGT VE+LF + RR+ L+ N +Y K+++LL A T V F+ K+
Sbjct: 131 TEVVAGQKGTVASVESLFRKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRFTI-KN 189
Query: 212 GAARADVHSIATSSR---LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSN 268
A+ V AT+ ++I VYG L+ L+ + S M G ++
Sbjct: 190 TQAKKTVVVFATNGNPTTKENIANVYGAKTLLALIPLDLELQFEPSVAETMMAGDKKSNI 249
Query: 269 YVAKKTTMVLF-----VNDR---LVECAP--LKRAVEIVYAA--TFPKASKPFIYMSIVL 316
V + +F DR V P L + + + +F A PF++ +
Sbjct: 250 QVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQSPFVFADFHM 309
Query: 317 PPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSP 370
DVNV P KR + L + ++E ++ +++ KL +S D + Q + P
Sbjct: 310 DTNAYDVNVSPDKRTILLHDAGALIESLKQSLQ-KLFESADQTVPQSQILGKLP 362
>UNIPROTKB|E2RAQ2 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 KO:K10864 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AAEX03017899 RefSeq:XP_536002.1
Ensembl:ENSCAFT00000014945 GeneID:478840 KEGG:cfa:478840
Uniprot:E2RAQ2
Length = 930
Score = 349 (127.9 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 101/362 (27%), Positives = 181/362 (50%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATSI+V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELLENSLDAGATSIDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
D P++ ++ TSK++ +EDL+++ + GFRGEAL S+ V V +TT T +
Sbjct: 63 AIDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASD--NFSTQ 120
Query: 144 Y-RDG---VMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSR 196
Y DG ++ +P +GT + V LF N+ R++ T + D+ K+ DLL
Sbjct: 121 YVLDGSGHIISQKPSHLG--QGTTVTVLKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLIS 178
Query: 197 MAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
I + H A S R ++R V G +V N+ E +Y+ S
Sbjct: 179 YGILKPELRIVFI-HNKA-VIWQKTRVSDRQVALRAVLGTAVMGNM---EPFQYHPEDSQ 233
Query: 257 VFKMDGYVSNSNYVAKKTTM------VLFVNDRLVECAPLKRAVEIVY-AATFPKASK-- 307
++ + G++ + T++ +F+N+R V + + + Y +AS+
Sbjct: 234 IY-LSGFLPKHDVDHSSTSLSTPERSFIFINNRPVHQKDILKLIRHYYNLKCLKEASRLY 292
Query: 308 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVE 367
P ++ I +P VDVN+ P K +V + N+E ++ +++ + + +Y+ +
Sbjct: 293 PIFFLKIDVPTADVDVNITPDKSQVLIQNKEAVLIALENLMTTCYGSLPSTNSYENNKTD 352
Query: 368 SS 369
S
Sbjct: 353 VS 354
>MGI|MGI:104288 [details] [associations]
symbol:Pms2 "postmeiotic segregation increased 2 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=ISO;IGI;IMP;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IGI;IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IMP] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032138
"single base insertion or deletion binding" evidence=ISO]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 MGI:MGI:104288 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GermOnline:ENSMUSG00000029613 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0016447 HOGENOM:HOG000165474 HOVERGEN:HBG008219 EMBL:U28724
IPI:IPI00133511 UniGene:Mm.2950 ProteinModelPortal:P54279
SMR:P54279 STRING:P54279 PhosphoSite:P54279 PRIDE:P54279
ChiTaRS:Pms2 Genevestigator:P54279 Uniprot:P54279
Length = 859
Score = 322 (118.4 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 82/235 (34%), Positives = 131/235 (55%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G+VI +AVKEL+ENS+DA AT+I++ +KD G+ LI+VSD+G G
Sbjct: 15 IKPIDGKSVHQICSGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ L +H TSK+ ++ DL +++ GFRGEAL+S+ + VT++T G R
Sbjct: 75 VEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTR 134
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIH 200
+ + ++ KGT + V++LFY + R K Q N +Y+K+V +L I
Sbjct: 135 LVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYSKMVQVLQAYCII 194
Query: 201 HTNVSFSCRKH---GAARADVHSIATSSRLDSIRTVYGVSVASNL---VQLEASE 249
V SC G A V + TS ++I +V+G +L VQL S+
Sbjct: 195 SAGVRVSCTNQLGQGKRHAVVCTSGTSGMKENIGSVFGQKQLQSLIPFVQLPPSD 249
Score = 75 (31.5 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 12/41 (29%), Positives = 29/41 (70%)
Query: 308 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 348
PF+ +++ + E VD+NV P KR++ L ++L++ +++++
Sbjct: 319 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
Score = 42 (19.8 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 342 EKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPS 385
EKI+ L + + V SS SS YN S L PS
Sbjct: 489 EKIEKDSGLSSTSAGSEEEFSTPEVASSFSSDYNVSS-LEDRPS 531
>UNIPROTKB|P54277 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006200 "ATP catabolic
process" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 GO:GO:0005524 GO:GO:0016887 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
EMBL:CH471058 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
Orphanet:144 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 EMBL:U13695 EMBL:AB102870
EMBL:AB102875 EMBL:AY267352 EMBL:AC008122 EMBL:BC096330
EMBL:BC096332 IPI:IPI00005541 IPI:IPI00654710 IPI:IPI00896518
PIR:S47597 RefSeq:NP_000525.1 RefSeq:NP_001121615.1
RefSeq:NP_001121616.1 UniGene:Hs.111749 PDB:2CS1 PDBsum:2CS1
ProteinModelPortal:P54277 SMR:P54277 IntAct:P54277 STRING:P54277
PhosphoSite:P54277 DMDM:1709683 PaxDb:P54277 PRIDE:P54277
DNASU:5378 Ensembl:ENST00000409823 Ensembl:ENST00000441310
Ensembl:ENST00000447232 GeneID:5378 KEGG:hsa:5378 UCSC:uc002urh.4
CTD:5378 GeneCards:GC02P190648 H-InvDB:HIX0029784 HGNC:HGNC:9121
HPA:CAB010233 MIM:600258 neXtProt:NX_P54277 PharmGKB:PA33447
HOGENOM:HOG000039972 HOVERGEN:HBG031886 InParanoid:P54277 KO:K10864
OMA:PFFHHLT OrthoDB:EOG41C6VK PhylomeDB:P54277 ChiTaRS:PMS1
EvolutionaryTrace:P54277 GenomeRNAi:5378 NextBio:20866
ArrayExpress:P54277 Bgee:P54277 CleanEx:HS_PMS1
Genevestigator:P54277 GermOnline:ENSG00000064933 Uniprot:P54277
Length = 932
Score = 340 (124.7 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 96/339 (28%), Positives = 177/339 (52%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATS++V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
D P++ ++ TSK++ +EDL+++ + GFRGEAL S+ + V +TT T +
Sbjct: 63 AVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAAD--NFSTQ 120
Query: 144 Y-RDG---VMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSR 196
Y DG ++ +P +GT + LF N+ R++ T + D+ KI DLL
Sbjct: 121 YVLDGSGHILSQKPSHLG--QGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMS 178
Query: 197 MAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
I ++ H A S + ++ ++ +V G +V +N+ E+ +Y+ S
Sbjct: 179 FGILKPDLRIVF-VHNKAVIWQKSRVSDHKM-ALMSVLGTAVMNNM---ESFQYHSEESQ 233
Query: 257 VFKMDGYV----SNSNYVAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASK--- 307
++ + G++ ++ ++ + T +F+N R V + + + Y K S
Sbjct: 234 IY-LSGFLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLY 292
Query: 308 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQS 346
P ++ I +P VDVN+ P K +V L N+E ++ +++
Sbjct: 293 PVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALEN 331
Score = 56 (24.8 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 485 QHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSE 544
+H L+N L + L Q+ RR + +Q+ P + L + K+ +D+E +
Sbjct: 665 KHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQI--PFSMKNLKINFKKQNKVDLEEKD 722
Query: 545 NDDLKEKIAEMNTELLKQKAEML 567
L + + L+ K E++
Sbjct: 723 EPCLIHNLRFPDAWLMTSKTEVM 745
Score = 43 (20.2 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 329 KREVSLLNQELIVEKIQSAVELKLRQSN 356
K + SL NQ + E +QS +E K R N
Sbjct: 667 KLKTSLSNQPKLDELLQSQIE-KRRSQN 693
Score = 40 (19.1 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 525 LSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEM 566
+ EL +EE L E DL+ ++M ++Q+++M
Sbjct: 605 IEELWKTLSEEEKLKYEEKATKDLERYNSQMK-RAIEQESQM 645
>ZFIN|ZDB-GENE-030616-528 [details] [associations]
symbol:pms1 "PMS1 postmeiotic segregation increased
1 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
ZFIN:ZDB-GENE-030616-528 GO:GO:0005524 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 EMBL:AL672217 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HSSP:P54278 CTD:5378 HOVERGEN:HBG031886
KO:K10864 IPI:IPI00868181 RefSeq:NP_958476.2 UniGene:Dr.85558
ProteinModelPortal:Q8JFR9 STRING:Q8JFR9 GeneID:368631
KEGG:dre:368631 InParanoid:Q8JFR9 NextBio:20813079
ArrayExpress:Q8JFR9 Uniprot:Q8JFR9
Length = 896
Score = 347 (127.2 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 118/441 (26%), Positives = 201/441 (45%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L V + + +VI ++ VKEL+ENSLDA ++S+ V +++ GL I+V D+G GI+
Sbjct: 4 LPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKA 63
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHG--YRV 142
D+ ++ +H TSK+S +EDL+ +++ GFRGEALAS+ + V +TT T Y V
Sbjct: 64 TDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSIQYSV 123
Query: 143 SYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSS---DDYTKIVDLLSRMAI 199
+ ++ +P +GT + NLF N+ RR+ N+ D+ ++ +LL A+
Sbjct: 124 DHNGQIVSQKPSHLG--QGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAV 181
Query: 200 HHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNL-VQLEASEYNDSSSFVF 258
+ + H A S + R + + SVA+ L VQ + + F
Sbjct: 182 IKPELRVTL-SHNKAVVWQKSRVSDHRTALMAVLGAASVANMLPVQHHQEQPEITIDGFF 240
Query: 259 KMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASK-----PFIYMS 313
G NS + +FVN R V + + ++ Y + + P M+
Sbjct: 241 PKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFMMN 300
Query: 314 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSP 373
I +P VDVN+ P K EV L N++ ++ +++ + SN K +P
Sbjct: 301 ITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGEENLK---TAGNPPDV 357
Query: 374 YNPSKDLHLNPSGS-KLQKVPVNKMVRTDSSDPAGRLH--AYVQSKPHTS--VASGPNLS 428
+ + +P S K ++P + + D L A S + V + +L
Sbjct: 358 TSLDEPKRTSPDISLKHPELPEDSSSNAEKQDGELSLSNTANTSSSSISEDWVINRSDLD 417
Query: 429 AVRSSVR-QRRNLNETADLTS 448
++ SV +N TADL S
Sbjct: 418 SINCSVPVDDVVMNSTADLNS 438
>UNIPROTKB|F1MW63 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:DAAA02003905 EMBL:DAAA02003906
EMBL:DAAA02003907 IPI:IPI00702663 UniGene:Bt.20671
Ensembl:ENSBTAT00000025019 Uniprot:F1MW63
Length = 932
Score = 347 (127.2 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 102/362 (28%), Positives = 183/362 (50%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ +VI VS VKEL+ENSLDA ATSI+V +++ G I+V D+G GI+
Sbjct: 3 QLSAATVRLLSSSQVITSVVSVVKELIENSLDARATSIDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
D P++ ++ TSK+S +EDL+++ + GFRGEAL S+ + V++TT T +
Sbjct: 63 AIDAPVMAVKYYTSKISSHEDLENLTTYGFRGEALGSICCIAEVSITTKTAAD--NFSTQ 120
Query: 144 Y-RDG---VMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSR 196
Y DG ++ +P +GT + LF N+ R++ T + D+ KI DLL
Sbjct: 121 YVLDGGGHIISQKPSHLG--QGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLIS 178
Query: 197 MAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
I +V H A + + ++ ++ +V G +V N+ E+ +Y+ S
Sbjct: 179 YGILKPDVRIVFI-HNKAIIWQKTRVSDHKM-ALMSVLGTTVMGNM---ESFQYHCEESQ 233
Query: 257 VFKMDGYVSNSNYVAKKTTM------VLFVNDRLVECAPLKRAVEIVYAATFPKASK--- 307
+F + G++ + T++ +F+N R V + + + Y K S
Sbjct: 234 IF-LSGFLPKHDADHSCTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLY 292
Query: 308 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVE 367
P ++ I +P VDVN+ P K +V L N+E ++ +++ + + + +Y+ +
Sbjct: 293 PIFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTRYGSLPSTNSYESNKTD 352
Query: 368 SS 369
S
Sbjct: 353 VS 354
>UNIPROTKB|D4A651 [details] [associations]
symbol:D4A651 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
IPI:IPI00782442 PRIDE:D4A651 Ensembl:ENSRNOT00000043714
ArrayExpress:D4A651 Uniprot:D4A651
Length = 910
Score = 344 (126.2 bits), Expect = 6.6e-28, P = 6.6e-28
Identities = 102/363 (28%), Positives = 179/363 (49%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ + I VS VKEL+ENSLDA A SI+V +++ G I++ D+G GI+
Sbjct: 3 QLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
D+P++ ++ TSK+S +EDLQ++ + GFRGEAL ++ V V VTT T +
Sbjct: 63 AVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEALGAICNVAEVVVTTRTAAD--DFSTQ 120
Query: 144 Y-RDG---VMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSR 196
Y DG ++ +P +GT + V LF N+ RR+ T + D+ + DLL
Sbjct: 121 YVLDGSGHILSQKPSHLG--QGTTVTVLKLFKNLPVRRQFYSTPKKCKDELKNVQDLLIS 178
Query: 197 MAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
A+ ++ + H A S R+ ++ +V G +V N+ +E Y + S
Sbjct: 179 YAVLKPDLRITF-VHNKAVIWQKSRVPDHRM-ALMSVLGTAVMGNMESVE--RYCEDSQI 234
Query: 257 ----VFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASK---PF 309
+F NS ++ +F+N R V + + + Y K S P
Sbjct: 235 HLRGLFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPI 294
Query: 310 IYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESS 369
++ I +P VD+N+ P K +V L N+E ++ +++ + + +Y+ V+ S
Sbjct: 295 FFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLLMTCYGPLPTTESYENNRVDVS 354
Query: 370 PSS 372
++
Sbjct: 355 SAN 357
>RGD|1359511 [details] [associations]
symbol:Pms1 "postmeiotic segregation increased 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006298 "mismatch repair" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR009071
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 RGD:1359511 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 HSSP:P23367 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 HOVERGEN:HBG031886
KO:K10864 EMBL:BC061722 IPI:IPI00421583 RefSeq:NP_001009535.1
UniGene:Rn.47945 ProteinModelPortal:Q6P7D0 SMR:Q6P7D0 STRING:Q6P7D0
GeneID:494322 KEGG:rno:494322 UCSC:RGD:1359511 NextBio:697597
Genevestigator:Q6P7D0 Uniprot:Q6P7D0
Length = 919
Score = 344 (126.2 bits), Expect = 6.7e-28, P = 6.7e-28
Identities = 102/363 (28%), Positives = 179/363 (49%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ + I VS VKEL+ENSLDA A SI+V +++ G I++ D+G GI+
Sbjct: 3 QLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
D+P++ ++ TSK+S +EDLQ++ + GFRGEAL ++ V V VTT T +
Sbjct: 63 AVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEALGAICNVAEVVVTTRTAAD--DFSTQ 120
Query: 144 Y-RDG---VMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSR 196
Y DG ++ +P +GT + V LF N+ RR+ T + D+ + DLL
Sbjct: 121 YVLDGSGHILSQKPSHLG--QGTTVTVLKLFKNLPVRRQFYSTPKKCKDELKNVQDLLIS 178
Query: 197 MAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
A+ ++ + H A S R+ ++ +V G +V N+ +E Y + S
Sbjct: 179 YAVLKPDLRITF-VHNKAVIWQKSRVPDHRM-ALMSVLGTAVMGNMESVE--RYCEDSQI 234
Query: 257 ----VFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASK---PF 309
+F NS ++ +F+N R V + + + Y K S P
Sbjct: 235 HLRGLFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPI 294
Query: 310 IYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESS 369
++ I +P VD+N+ P K +V L N+E ++ +++ + + +Y+ V+ S
Sbjct: 295 FFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLLMTCYGPLPTTESYENNRVDVS 354
Query: 370 PSS 372
++
Sbjct: 355 SAN 357
>UNIPROTKB|Q22B61 [details] [associations]
symbol:TTHERM_01109940 "DNA mismatch repair protein,
C-terminal domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
ProtClustDB:CLSZ2846737 EMBL:GG662565 RefSeq:XP_001030203.2
UniGene:Tth.6164 ProteinModelPortal:Q22B61 EnsemblProtists:EAR82540
GeneID:7840245 KEGG:tet:TTHERM_01109940 Uniprot:Q22B61
Length = 946
Score = 334 (122.6 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 95/326 (29%), Positives = 173/326 (53%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L++S + I +VI + VKELVENSLDA +T I V +K+ G + ++V D+G G
Sbjct: 2 IKKLDQSSILNICVNQVIIDLATCVKELVENSLDAGSTKIEVYLKEYGKEGVEVVDNGSG 61
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I ++L + ++ TSKL +++DL+S+ + GFRGEAL +++ + +T+TT T YR
Sbjct: 62 ISSQNLEQIAQKGATSKLRQFQDLESLDTFGFRGEALNAISVLSQLTITTKTDSDEMAYR 121
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTL-QNSSDDYTKIVDLLSRMAI 199
+ +D ++S+ +GT I + +LF N+ R++ +N Y K+V++++ AI
Sbjct: 122 YQFNQDNTIKSKTLV-PRERGTTISLTDLFGNIPVRKQEFNKNIISQYNKLVNMITEYAI 180
Query: 200 HHTNVSFSCRKHGAARADVHSIATS-----SRLDSIRTVYGVSVASNLVQLE---ASEYN 251
N C + +++ I S + L V+ ++ LV L+ E +
Sbjct: 181 ISVNCQI-CLINQSSKKGREMILNSGSPMKNMLQKTAQVFSKKISDMLVDLKFDFGEECS 239
Query: 252 DSSSFVF--KMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPK--ASK 307
++ + G V +S + K + LFVN R V P K+ + +++ + K +S
Sbjct: 240 VIEGYILNRQTSGSVQDSKSIQKNMSY-LFVNTRPVN--PFKK-MNSIFSDIYKKYNSSA 295
Query: 308 PFIY-MSIVLPPEHVDVNVHPTKREV 332
+IY + + + + +D NV P KR++
Sbjct: 296 RYIYILHLKVKKDAIDFNVSPDKRDI 321
Score = 55 (24.4 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 54/294 (18%), Positives = 125/294 (42%)
Query: 340 IVEKIQSAVELKLRQSNDS-RTYKEQTVESSPSSPYNPSKDLH-LNPSGSKLQKVPVNKM 397
I ++ + A E +L+ + + + KE+ E+ SKD + N + SK Q + ++
Sbjct: 505 IAQQRKKAYEEQLQNTREELQNSKEEYQENYQKKQQTSSKDHNNQNKTDSK-QLINEDEE 563
Query: 398 VRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVD 457
D S +L Y QSK + S + + ++ ++ Q++ ++ +
Sbjct: 564 QNQDFSYFNDKLKLYKQSKQQSENNSKYQVKEYSFDMFKKSKQENSSKGQDNQKINNEDE 623
Query: 458 RNCHSGLLDIVRHCS-----FIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFA 512
NC ++ S + +Y + + L SL++E +LV + F
Sbjct: 624 ENCDDQCCTQSQNYSNSQNEYKSEDSSLYKMKEEKQTKQLKQ--SLNQE---ELVQKHFQ 678
Query: 513 HFNAIQLSDPAPLSELLMLALK-EED----LDVENSENDDLKEKIAEMNTELLKQKAEML 567
++ + +EL+ + K ++D +++ + D+++E ++ +L ++E
Sbjct: 679 IQEEARILNKKQNNELMEIDEKIDQDQGRAFKIKSKKEDEIEELADDLEEQLKTWESEDF 738
Query: 568 EEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAI 621
++ V++ G ++ II Y + D+I F++ D DEK ++ +
Sbjct: 739 KKDKFVELQIIGQFNKAFIIA--YWVEKDQI--FLI----DQHASDEKTNYERL 784
Score = 43 (20.2 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 533 LKEEDLDVENSENDDLKE 550
++EEDL E+SE ++ KE
Sbjct: 404 IQEEDLSNEDSEANNQKE 421
Score = 38 (18.4 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 328 TKREVSLLNQELIVEK---IQSAVE-LKLRQSND 357
TK+ LNQE +V+K IQ L +Q+N+
Sbjct: 660 TKQLKQSLNQEELVQKHFQIQEEARILNKKQNNE 693
>WB|WBGene00004064 [details] [associations]
symbol:pms-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0009792 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272
PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1
ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5
EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2
CTD:179587 WormBase:H12C20.2a NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 279 (103.3 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 64/221 (28%), Positives = 120/221 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I R+ + V R+ +V+ SA+++L++NS+DA +T I++ VK+ G + I+V D+G G
Sbjct: 6 IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSG 65
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I + LC+ H+TSKL+++ D + ++GFRGEAL ++ V V++ T G R
Sbjct: 66 IEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGTR 125
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSD-DYTKIVDLLSRMAI 199
++Y G + A + GT I+V LF + RRK L+ S ++ K++ + A+
Sbjct: 126 LTYDHSGNIICRQSAAREL-GTTIIVNKLFETLPVRRKELERSQKREFVKLLSTVQSFAL 184
Query: 200 HHTNVSFSCRKH-GAARADVHSI--ATSSRLDSIRTVYGVS 237
++ C + + ++ T+S D + ++G++
Sbjct: 185 LCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGIA 225
Score = 114 (45.2 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 257 VFKMDGYVSNSNYVAKKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 313
+FK+ G+VS+ + + T +++N+R VE + + + VY F K P I +
Sbjct: 265 LFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQ-FNKKQYPIIVLF 323
Query: 314 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 348
I +PPE +DVNV P K+ V L + ++ +++++
Sbjct: 324 IDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASM 358
Score = 62 (26.9 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 61/274 (22%), Positives = 104/274 (37%)
Query: 313 SIVLPPEHVDVNVH-PTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPS 371
S + P+ V+V+ P+K + L ++EL I+ LK D EQ+ ES
Sbjct: 468 SFTMEPKRVEVSKKIPSKSDKKLTDEELRSAVIEEN-PLKKAGEIDDIEILEQSQESQDV 526
Query: 372 SPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVR 431
+ S+D + + S++ + + S R AY P T + N
Sbjct: 527 NESQCSQDSQTSQN-SRVSYFTLRPQQKIKFSMKLLR-EAY---SPKTD-ETDDNTEEAE 580
Query: 432 SSVRQRRNLNETADLTSIQELIDDVDRNCHSGLL-DIVRHCSFIGMADDVYALLQHNTHM 490
S ++ LNE + +E DD +R L D IG + + + + H+
Sbjct: 581 VSA-EKDVLNEITTKINKEEN-DDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHL 638
Query: 491 YLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLS--ELLMLALKEE-------DLDVE 541
++ + + ++ ++ L+ A L P L + L ++E D E
Sbjct: 639 FIVDQHASDEKYNFER-LQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFE 697
Query: 542 NSENDDLKEKIAEMNTELLKQKAEM--LEEYFCV 573
SEND + ELL Q+ LEE V
Sbjct: 698 FSENDGCIKTFLTARPELLNQQLTNSDLEEILAV 731
Score = 40 (19.1 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 428 SAVRSSVRQRRNLN 441
S VRSSV RR +N
Sbjct: 370 STVRSSVEDRRIMN 383
>UNIPROTKB|G5EFG5 [details] [associations]
symbol:pms-2 "Protein PMS-2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0009792 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272 PIR:B89219
PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 ProteinModelPortal:G5EFG5
SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a
GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a
NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 279 (103.3 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 64/221 (28%), Positives = 120/221 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I R+ + V R+ +V+ SA+++L++NS+DA +T I++ VK+ G + I+V D+G G
Sbjct: 6 IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSG 65
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I + LC+ H+TSKL+++ D + ++GFRGEAL ++ V V++ T G R
Sbjct: 66 IEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGTR 125
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSD-DYTKIVDLLSRMAI 199
++Y G + A + GT I+V LF + RRK L+ S ++ K++ + A+
Sbjct: 126 LTYDHSGNIICRQSAAREL-GTTIIVNKLFETLPVRRKELERSQKREFVKLLSTVQSFAL 184
Query: 200 HHTNVSFSCRKH-GAARADVHSI--ATSSRLDSIRTVYGVS 237
++ C + + ++ T+S D + ++G++
Sbjct: 185 LCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGIA 225
Score = 114 (45.2 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 257 VFKMDGYVSNSNYVAKKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 313
+FK+ G+VS+ + + T +++N+R VE + + + VY F K P I +
Sbjct: 265 LFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQ-FNKKQYPIIVLF 323
Query: 314 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 348
I +PPE +DVNV P K+ V L + ++ +++++
Sbjct: 324 IDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASM 358
Score = 62 (26.9 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 61/274 (22%), Positives = 104/274 (37%)
Query: 313 SIVLPPEHVDVNVH-PTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPS 371
S + P+ V+V+ P+K + L ++EL I+ LK D EQ+ ES
Sbjct: 468 SFTMEPKRVEVSKKIPSKSDKKLTDEELRSAVIEEN-PLKKAGEIDDIEILEQSQESQDV 526
Query: 372 SPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVR 431
+ S+D + + S++ + + S R AY P T + N
Sbjct: 527 NESQCSQDSQTSQN-SRVSYFTLRPQQKIKFSMKLLR-EAY---SPKTD-ETDDNTEEAE 580
Query: 432 SSVRQRRNLNETADLTSIQELIDDVDRNCHSGLL-DIVRHCSFIGMADDVYALLQHNTHM 490
S ++ LNE + +E DD +R L D IG + + + + H+
Sbjct: 581 VSA-EKDVLNEITTKINKEEN-DDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHL 638
Query: 491 YLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLS--ELLMLALKEE-------DLDVE 541
++ + + ++ ++ L+ A L P L + L ++E D E
Sbjct: 639 FIVDQHASDEKYNFER-LQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFE 697
Query: 542 NSENDDLKEKIAEMNTELLKQKAEM--LEEYFCV 573
SEND + ELL Q+ LEE V
Sbjct: 698 FSENDGCIKTFLTARPELLNQQLTNSDLEEILAV 731
Score = 40 (19.1 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 428 SAVRSSVRQRRNLN 441
S VRSSV RR +N
Sbjct: 370 STVRSSVEDRRIMN 383
>DICTYBASE|DDB_G0283981 [details] [associations]
symbol:pms1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032300
"mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 RefSeq:XP_638844.1
ProteinModelPortal:Q54QA0 STRING:Q54QA0 EnsemblProtists:DDB0232417
GeneID:8624368 KEGG:ddi:DDB_G0283981 KO:K10858 OMA:TINECED
ProtClustDB:CLSZ2846737 Uniprot:Q54QA0
Length = 1022
Score = 329 (120.9 bits), Expect = 6.9e-26, Sum P(2) = 6.9e-26
Identities = 80/249 (32%), Positives = 142/249 (57%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +++ +N I +G+VI AVKEL+ENS+DA AT++ + +K+ G + I+V D+G G
Sbjct: 2 IKAIDKESINNICSGQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSG 61
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ + L +H TSKL + DL SI++ GFRGEAL+S+ + + +TT TK + R
Sbjct: 62 VEPSNFVALTMKHCTSKLESFSDLLSIETYGFRGEALSSLCSLSNCIITTRTKNQVTAQR 121
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMAI 199
+ + ++G ++++ V GT + + NLF + R + + N +Y K++ +L A+
Sbjct: 122 LVFDKEGKIQTQTPVAREV-GTTVQLSNLFKGLPVRYQEFKRNIKKEYAKLLTILQAYAL 180
Query: 200 HHTNVSFSCRKHG--AARADVHSIATSSRL-DSIRTVYGVSVASNLVQLEASEYNDSSSF 256
TN +C + R+ V S + S + D++ V+G ++ +L + AS DS
Sbjct: 181 ISTNTRITCYNQAGKSPRSCVLSTTSGSTIRDNLINVFGTKMSQSLDEFTAS---DS--- 234
Query: 257 VFKMDGYVS 265
+FK++G +S
Sbjct: 235 LFKVNGLIS 243
Score = 46 (21.3 bits), Expect = 6.9e-26, Sum P(2) = 6.9e-26
Identities = 34/142 (23%), Positives = 55/142 (38%)
Query: 323 VNVHPTKREVSLLNQELIVEKIQSAVELKLRQSN-DSRTYKEQTVESS----PSSPYNPS 377
+ H T S LN +K ++ +N ++R E+ + S P +
Sbjct: 431 IKKHSTTTTTSSLNSPSSNKKSSNSTSSSSSSNNKNNRNNLEEDGDDSFDITDQQPLKRA 490
Query: 378 K-DLHLNPSGSK--LQKVPV-NKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSS 433
K D + N S K L K P NK ++ D YVQ P V S+
Sbjct: 491 KYDGNYNNSNKKPELPKTPYPNKKKNNENEDEDEDEDNYVQ----------P----VFSN 536
Query: 434 VRQRRNLNETADLTSIQELIDD 455
V + +N + + S+ ++IDD
Sbjct: 537 VNKSKNSSNSGSSNSLDDIIDD 558
>UNIPROTKB|Q7NL47 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:251221 "Gloeobacter violaceus PCC 7421" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:BA000045 GenomeReviews:BA000045_GR HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 RefSeq:NP_924225.1
ProteinModelPortal:Q7NL47 GeneID:2598842 KEGG:gvi:gvip188
PATRIC:22041969 OMA:NTHKAIN BioCyc:GVIO251221:GH9A-1330-MONOMER
Uniprot:Q7NL47
Length = 573
Score = 324 (119.1 bits), Expect = 7.2e-26, Sum P(2) = 7.2e-26
Identities = 95/334 (28%), Positives = 152/334 (45%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L + V +AAGEVI P + V+ELV+NSLDA A I V + +QV D+G G
Sbjct: 46 IRPLADQTVRLLAAGEVIDSPAAVVRELVDNSLDAGADRIRVSFWPESWR-VQVQDNGLG 104
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
E+LP+ H TSKL EDL ++++GFRGE L S+ V + + T T R
Sbjct: 105 FEAEELPMAARSHATSKLGAIEDLWRLRTLGFRGEGLHSIAVVARLEILTCTPTARTATR 164
Query: 142 VSY--RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAI 199
Y + ++ES+P AA GT + V LF RR+ L ++ + L+ R A+
Sbjct: 165 ARYDHKGELVESQP--AAAAPGTVVTVSELFELQPVRRRFLADTKAQVRAVTQLVHRYAL 222
Query: 200 HHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFK 259
+ F G + + + A + +++ + +L ++
Sbjct: 223 AYPGHLFELAVDGRLQLQLWA-APGLKQRALQLLNSYD-EHDLREVHLERDGRRVRLAIG 280
Query: 260 MDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 319
+ S A+ + +++N R V L++AV + T +P + ++LP +
Sbjct: 281 LPDRCSR----ARADWLQIYINGRFVRHGELEQAVRAGFERTLRPGRQPVCIVQLILPAD 336
Query: 320 HVDVNVHPTKREVSLLNQELIVEKIQSAVELKLR 353
VD N HP K EV L E + +A+ LR
Sbjct: 337 EVDWNRHPAKLEVQLAGTAPACELVVAAIGEGLR 370
Score = 39 (18.8 bits), Expect = 7.2e-26, Sum P(2) = 7.2e-26
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 517 IQLSDPAPLSELLMLALKE 535
+QL+ AP EL++ A+ E
Sbjct: 349 VQLAGTAPACELVVAAIGE 367
>UNIPROTKB|F1P0J4 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AADN02034562 EMBL:AADN02034563
IPI:IPI00590399 PRIDE:F1P0J4 Ensembl:ENSGALT00000003701
Uniprot:F1P0J4
Length = 916
Score = 329 (120.9 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 101/337 (29%), Positives = 173/337 (51%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L V +++ +VI VS VKEL+ENSLDA AT+I++ +++ G I+V D+G+GI+
Sbjct: 3 QLSAETVRLLSSSQVITSVVSVVKELIENSLDASATTIDIRLENYGFDKIEVRDNGNGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGH-LHGYRV 142
D+P++ +H TSK+S EDL+ + + GFRGEAL S+ + V VTT T + V
Sbjct: 63 VADVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICCISEVLVTTRTADDDISTQYV 122
Query: 143 SYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSRMAI 199
G + S+ K +GT + V LF N+ R++ T + ++ K+ DLL I
Sbjct: 123 LDSSGHVTSQ-KPSHLGQGTTVTVLKLFKNLPVRKQFYSTNRKCKEELKKVHDLLIAYGI 181
Query: 200 HHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL----EASEYNDSSS 255
+ + + A + + S + +V G +V ++V E E N S
Sbjct: 182 IKPELRITFVHNKAVIWQKNRV--SDHKMACMSVLGTAVMGSMVPFQHCCEDPEIN-LSG 238
Query: 256 FVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASK---PFIYM 312
F+ K + S ++ + + + + FVN R V ++ + Y+ K S P ++
Sbjct: 239 FLPKAESDSSLTSLSSSERSFI-FVNSRPVH----QKEILKYYSVLMQKDSTRLYPVFFL 293
Query: 313 SIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 349
+I +P VDVNV P K EV L +E ++ +++ ++
Sbjct: 294 NITVPASAVDVNVTPDKTEVLLQYKESVLLAVENVLK 330
Score = 39 (18.8 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 648 KKRKPLKNPVDIERYPNDAGMAI 670
K+ LK D+ERY +A A+
Sbjct: 609 KQEYELKAARDLERYNREANKAM 631
Score = 38 (18.4 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 330 REVSLLNQELIVEKIQSAVEL 350
R+ L+N +L VEK++ V L
Sbjct: 740 RKRLLMNHKLPVEKLEKPVVL 760
>UNIPROTKB|Q7SAM1 [details] [associations]
symbol:NCU08020 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B EMBL:AABX02000051
OMA:SDFAKMK RefSeq:XP_962690.2 UniGene:Ncr.24794
ProteinModelPortal:Q7SAM1 STRING:Q7SAM1
EnsemblFungi:EFNCRT00000008289 GeneID:3878856 KEGG:ncr:NCU08020
Uniprot:Q7SAM1
Length = 894
Score = 319 (117.4 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 76/231 (32%), Positives = 133/231 (57%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ S +++I +G+VI S KELVEN+LDA AT+I+V K+ GL I+V D+G G
Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDSIEVQDNGSG 66
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHL-HGY 140
I + + +H TSKLS Y+DL ++++ GFRGEAL+S+ + H T+ T T+
Sbjct: 67 ISSSNYESIALKHYTSKLSNYDDLSTLQTFGFRGEALSSLCALSHFTIVTCTQKEAPKAT 126
Query: 141 RVSYR-DGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMA 198
++ + G ++S + +GT + VENLF ++ RR+ L+ N ++ K+V+LL++ A
Sbjct: 127 KLEFETSGKLKST-SVVSGQRGTTVSVENLFKSLPVRRRELERNIKREWGKVVNLLNQYA 185
Query: 199 IHHTNVSFSCRKHGAARADVHSIATSSR---LDSIRTVYGVSVASNLVQLE 246
T+V F+ + + +T ++I V+G+ + L+ ++
Sbjct: 186 CIQTSVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGIKTMTALIAMD 236
>UNIPROTKB|E7EUC9 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
IPI:IPI01008784 ProteinModelPortal:E7EUC9 SMR:E7EUC9
Ensembl:ENST00000441265 ArrayExpress:E7EUC9 Bgee:E7EUC9
Uniprot:E7EUC9
Length = 105
Score = 294 (108.6 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 55/105 (52%), Positives = 76/105 (72%)
Query: 260 MDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 319
M+GY+SN+NY KK +LF+N RLVE L++A+E VYAA PK + PF+Y+S+ + P+
Sbjct: 1 MNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQ 60
Query: 320 HVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQ 364
+VDVNVHPTK EV L++E I+E++Q +E KL SN SR Y Q
Sbjct: 61 NVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 105
>UNIPROTKB|E1BA65 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447
GeneTree:ENSGT00530000063289 EMBL:DAAA02058333 IPI:IPI00699806
Ensembl:ENSBTAT00000037121 OMA:PSDSICE Uniprot:E1BA65
Length = 675
Score = 317 (116.6 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 90/263 (34%), Positives = 145/263 (55%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G+V+ +AVKELVENS+DA ATSI++ +KD G++LI+VSD+G G
Sbjct: 8 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ L +H TSK+ ++ DL +++ GFRGEAL+S+ + VT++T G R
Sbjct: 68 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHTSVKVGTR 127
Query: 142 VSY-RDG-VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMA 198
+ + +G +++ P +GT + V+ LFY + R K Q N ++ K+V +L
Sbjct: 128 LVFDHNGKILQKTPYP--RPRGTTVSVQQLFYTLPVRHKEFQRNIKKEFAKMVQVLQAYC 185
Query: 199 IHHTNVSFSCRKH---GAARADVHSIATSSRLDSIRTVYGVSVASNL---VQLEAS---- 248
I V SC G + V + +SS ++I V+G +L VQL S
Sbjct: 186 IISAGVRISCTNQVGQGKRQPVVCTSGSSSMKENIGLVFGQKQLQSLIPFVQLPPSDSIC 245
Query: 249 -EYNDSSSF----VFKMDGYVSN 266
EY S S +F + G+VS+
Sbjct: 246 EEYGLSCSQALHNLFCISGFVSH 268
Score = 41 (19.5 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 16/80 (20%), Positives = 31/80 (38%)
Query: 344 IQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVN---KMVRT 400
+ S VE++ + S + + S+P + +PS D + K + + K+ T
Sbjct: 479 LMSRVEMEEDSGHGSASAGSEEASSTPETSSHPSTDRVASSPEDKFSQENMESREKLPET 538
Query: 401 DSSDPAGRLHAYVQSKPHTS 420
D + H + TS
Sbjct: 539 DHRLSGTKCHLNQEESSSTS 558
Score = 37 (18.1 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 346 SAVELKLRQSNDSRT---YKEQTVESSPSSPYNPSKDLHLNPS 385
S + L Q S T + T SSP++ + + LNPS
Sbjct: 543 SGTKCHLNQEESSSTSGVLPQPTKLSSPNAKRFTKEGIPLNPS 585
>UNIPROTKB|Q755U7 [details] [associations]
symbol:AER421W "AER421Wp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
OrthoDB:EOG4FFH9B RefSeq:NP_985276.1 ProteinModelPortal:Q755U7
STRING:Q755U7 EnsemblFungi:AAS53100 GeneID:4621495
KEGG:ago:AGOS_AER421W PhylomeDB:Q755U7 Uniprot:Q755U7
Length = 903
Score = 312 (114.9 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 109/404 (26%), Positives = 194/404 (48%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I+ + ++ V+RI +G+VI V+AVKE+VENSLDA A + + ++ GL+ I+ +D+G G
Sbjct: 5 INAINQADVHRITSGQVIIDLVAAVKEVVENSLDAHADKLEITFRNYGLEAIECADNGDG 64
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I + L +H TSK+ ++EDL + + GFRGEALAS+ + +TV T KG ++
Sbjct: 65 IPDSNFDSLALKHHTSKIEEFEDLTRVTTFGFRGEALASICAMASLTVITTQKGP-KAHK 123
Query: 142 VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKT-LQNSSDDYTKIVDLLSRMAIH 200
+ Y + + KGT + + +LF NM R+K ++N + K V LL A+
Sbjct: 124 LEYDSHGRLVKKTVTSRNKGTTVQLRHLFNNMPVRKKEFVRNFKKQFGKCVTLLQSYALL 183
Query: 201 HTNVSFSCRKHGAARADVHSIATSSRLD---SIRTVYGVSVASNL----VQLEASEYNDS 253
N S AA + ++T R D +I TV+G L + L+ +EY +
Sbjct: 184 SENCRLSIFNVNAAGSKSLLLSTPGRNDISKNILTVFGSDGMHGLQKVGLHLDLNEYKEK 243
Query: 254 SSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYA----ATFPKASKPF 309
+ D + ++++ + + +++ C + + +Y +P+ K
Sbjct: 244 MLKKYSEDSTLDDADH---RIAVTGYISRASFGCGRSGKDRQFIYINKRPVDYPQVLKCC 300
Query: 310 --IYMS---IVLPPEHVDVNVHPTKREVSLL-NQELIVEKIQSAVELKLRQSNDSRTYKE 363
IY S + P ++ + P +V++ ++ ++ + V L + D + E
Sbjct: 301 NDIYRSFNNVQYPVIILNFELSPQFVDVNVTPDKRTVLLHNEEYVLQSLAEKLDGH-FNE 359
Query: 364 QTV---ESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSD 404
Q + +S PS P P +D L KL VP +++ T D
Sbjct: 360 QELMLPKSLPSLPV-PHQDSELKVKRRKL--VPSQELIGTFEDD 400
>UNIPROTKB|F1RFM9 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 CTD:5395 EMBL:FP102636
RefSeq:XP_003124331.1 Ensembl:ENSSSCT00000008330 GeneID:100514342
KEGG:ssc:100514342 Uniprot:F1RFM9
Length = 852
Score = 308 (113.5 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 77/238 (32%), Positives = 133/238 (55%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G+V+ +AVKELVENS+DA AT+I++ +KD G+ LI+VSD+G G
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGMDLIEVSDNGCG 74
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ L +H TSK+ ++ DL +++ GFRGEAL+S+ + VT++T G R
Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134
Query: 142 VSY-RDG-VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMA 198
+ + +G +++ P +GT + V+ LFY + R K Q N ++ K+V +L
Sbjct: 135 LVFDHNGKILQKSPYP--RPRGTTVSVQQLFYTLPVRHKEFQRNIKKEFAKMVQVLHAYC 192
Query: 199 IHHTNVSFSCRKH---GAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDS 253
I + V +C G + V + +S ++I +V+G +L+ +DS
Sbjct: 193 IISSGVRVTCTNQVGQGKRQPVVSTSGGASIKENIGSVFGQKQLQSLISFVQLPPSDS 250
>SGD|S000005026 [details] [associations]
symbol:PMS1 "ATP-binding protein involved in mismatch repair"
species:4932 "Saccharomyces cerevisiae" [GO:0016887 "ATPase
activity" evidence=IMP;IDA] [GO:0032389 "MutLalpha complex"
evidence=IEA;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000710 "meiotic mismatch repair" evidence=IMP] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0032135 "DNA insertion or deletion
binding" evidence=IDA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IMP]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0000404 "loop
DNA binding" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
SGD:S000005026 Prosite:PS00058 GO:GO:0005524 GO:GO:0005737
EMBL:BK006947 GO:GO:0016887 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:DQ115393 GO:GO:0030983 EMBL:X86470 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
EMBL:X89016 eggNOG:COG0323 EMBL:AF458969 EMBL:AF458971
EMBL:AF458973 EMBL:AF458974 EMBL:AF458976 EMBL:AF458977 KO:K14561
RefSeq:NP_014324.3 GeneID:855649 KEGG:sce:YNL075W GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0000710 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
OrthoDB:EOG4FFH9B EMBL:M29688 EMBL:DQ356628 EMBL:DQ356629
EMBL:DQ356630 EMBL:DQ356631 EMBL:DQ356632 EMBL:Z71357 EMBL:Z71358
PIR:S53896 RefSeq:NP_014317.4 PDB:3H4L PDBsum:3H4L
ProteinModelPortal:P14242 SMR:P14242 DIP:DIP-2416N IntAct:P14242
MINT:MINT-625253 STRING:P14242 PaxDb:P14242 PeptideAtlas:P14242
EnsemblFungi:YNL082W GeneID:855642 KEGG:sce:YNL082W CYGD:YNL082w
GeneTree:ENSGT00530000063289 EvolutionaryTrace:P14242
NextBio:979872 Genevestigator:P14242 GermOnline:YNL082W
Uniprot:P14242
Length = 873
Score = 308 (113.5 bits), Expect = 5.6e-24, P = 5.6e-24
Identities = 111/442 (25%), Positives = 208/442 (47%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
IH++ + V+RI +G+VI +AVKELV+NS+DA+A I ++ KD GL+ I+ SD+G G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 63
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I + L +H TSK++K++D+ ++++GFRGEAL+S+ + ++V T T +
Sbjct: 64 IDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPP-KADK 122
Query: 142 VSYRDGVMESEPKACAAV-KGTQIMVENLFYNMIARRKTLQNS-SDDYTKIVDLLSRMAI 199
+ Y D V K + KGT ++V LF+N+ R+K + +TK + ++ AI
Sbjct: 123 LEY-DMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYAI 181
Query: 200 HHTNVSFSC---RKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF 256
+ + FS G + ++ SS +I +V+G L +++ D + F
Sbjct: 182 INAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDL--VLDLNPF 239
Query: 257 VFKMDG-YVSNSNYVAK--KTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 313
+M G Y + +++ K + +++ C + + +Y +P Y +
Sbjct: 240 KNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVN-----KRPVEYST 294
Query: 314 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV--ELKLRQSNDSRTYKEQTVESSPS 371
++ V + + LN EL + I V + ++ ++ R + +++ S
Sbjct: 295 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVID-IFKTTLS 353
Query: 372 SPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHT--SVASGPNLSA 429
YN ++L L + K ++T+ D H HT S ++ N +
Sbjct: 354 DYYN-RQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAH 412
Query: 430 VRSSVRQRRNLNETADLTSIQE 451
S+ N T +LTS+ +
Sbjct: 413 FNSTTGVIDKSNGT-ELTSVMD 433
>UNIPROTKB|P54278 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006298 "mismatch repair" evidence=IDA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0042493 GO:GO:0016887 GO:GO:0006298 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 EMBL:AC005995
MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 Orphanet:144 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
HOGENOM:HOG000165474 OMA:LDKPWNC HPA:CAB010235 EMBL:U13696
EMBL:AB103082 EMBL:AB103083 EMBL:AB103085 EMBL:U14658 EMBL:AK312390
EMBL:BC093921 IPI:IPI00418329 IPI:IPI00746337 IPI:IPI00873034
IPI:IPI00874088 PIR:S47598 RefSeq:NP_000526.1 UniGene:Hs.632637
PDB:1EA6 PDB:1H7S PDB:1H7U PDBsum:1EA6 PDBsum:1H7S PDBsum:1H7U
ProteinModelPortal:P54278 SMR:P54278 DIP:DIP-27602N IntAct:P54278
MINT:MINT-2804140 STRING:P54278 PhosphoSite:P54278 DMDM:1709685
SWISS-2DPAGE:P54278 PRIDE:P54278 Ensembl:ENST00000265849
Ensembl:ENST00000382321 Ensembl:ENST00000406569 GeneID:5395
KEGG:hsa:5395 UCSC:uc003spk.3 UCSC:uc010kte.3 UCSC:uc010ktf.2
CTD:5395 GeneCards:GC07M005979 HGNC:HGNC:9122 MIM:600259 MIM:614337
neXtProt:NX_P54278 PharmGKB:PA33448 HOVERGEN:HBG008219
InParanoid:P54278 PhylomeDB:P54278 EvolutionaryTrace:P54278
GenomeRNAi:5395 NextBio:20918 ArrayExpress:P54278 Bgee:P54278
CleanEx:HS_PMS2 Genevestigator:P54278 GermOnline:ENSG00000122512
Uniprot:P54278
Length = 862
Score = 305 (112.4 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 86/266 (32%), Positives = 144/266 (54%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G+V+ +AVKELVENSLDA AT+I++ +KD G+ LI+VSD+G G
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ L +H TSK+ ++ DL +++ GFRGEAL+S+ + VT++T G R
Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134
Query: 142 VSY-RDG-VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQ-NSSDDYTKIVDLLSRMA 198
+ + +G +++ P +GT + V+ LF + R K Q N +Y K+V +L
Sbjct: 135 LMFDHNGKIIQKTPYP--RPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYC 192
Query: 199 IHHTNVSFSCRKH---GAARADVHSIATSSRLDSIRTVYGVSVASNL---VQLEAS---- 248
I + SC G + V + + S ++I +V+G +L VQL S
Sbjct: 193 IISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVC 252
Query: 249 -EY----NDSSSFVFKMDGYVSNSNY 269
EY +D+ +F + G++S +
Sbjct: 253 EEYGLSCSDALHNLFYISGFISQCTH 278
>UNIPROTKB|Q3BDU3 [details] [associations]
symbol:PMS1 "Rhabdomyosarcoma antigen MU-RMS-40.10E"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 Pfam:PF00505 GO:GO:0005524 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 HOGENOM:HOG000039972
HOVERGEN:HBG031886 ChiTaRS:PMS1 EMBL:AY540751 IPI:IPI00916989
SMR:Q3BDU3 STRING:Q3BDU3 Ensembl:ENST00000450931 Uniprot:Q3BDU3
Length = 659
Score = 272 (100.8 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 64/183 (34%), Positives = 105/183 (57%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATS++V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
D P++ ++ TSK++ +EDL+++ + GFRGEAL S+ + V +TT T +
Sbjct: 63 AVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAAD--NFSTQ 120
Query: 144 Y-RDG---VMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSR 196
Y DG ++ +P +GT + LF N+ R++ T + D+ KI DLL
Sbjct: 121 YVLDGSGHILSQKPSHLG--QGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMS 178
Query: 197 MAI 199
I
Sbjct: 179 FGI 181
Score = 78 (32.5 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 254 SSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASK---PFI 310
S F+ K D S ++ + + + F+N R V + + + Y K S P
Sbjct: 198 SGFLPKCDADHSFTSLSTPERSFI-FINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVF 256
Query: 311 YMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQS 346
++ I +P VDVN+ P K +V L N+E ++ +++
Sbjct: 257 FLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALEN 292
Score = 43 (20.2 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 329 KREVSLLNQELIVEKIQSAVELKLRQSN 356
K + SL NQ + E +QS +E K R N
Sbjct: 628 KLKTSLSNQPKLDELLQSQIE-KRRSQN 654
Score = 40 (19.1 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 525 LSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEM 566
+ EL +EE L E DL+ ++M ++Q+++M
Sbjct: 566 IEELWKTLSEEEKLKYEEKATKDLERYNSQMK-RAIEQESQM 606
>UNIPROTKB|C9JF76 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122 HGNC:HGNC:9121
ChiTaRS:PMS1 IPI:IPI01013621 ProteinModelPortal:C9JF76 SMR:C9JF76
STRING:C9JF76 Ensembl:ENST00000424766 HOGENOM:HOG000137699
ArrayExpress:C9JF76 Bgee:C9JF76 Uniprot:C9JF76
Length = 194
Score = 272 (100.8 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 64/183 (34%), Positives = 105/183 (57%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATS++V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVS 143
D P++ ++ TSK++ +EDL+++ + GFRGEAL S+ + V +TT T +
Sbjct: 63 AVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAAD--NFSTQ 120
Query: 144 Y-RDG---VMESEPKACAAVKGTQIMVENLFYNMIARRK---TLQNSSDDYTKIVDLLSR 196
Y DG ++ +P +GT + LF N+ R++ T + D+ KI DLL
Sbjct: 121 YVLDGSGHILSQKPSHLG--QGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMS 178
Query: 197 MAI 199
I
Sbjct: 179 FGI 181
>ASPGD|ASPL0000042310 [details] [associations]
symbol:AN1564 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 EMBL:BN001307 GO:GO:0016887
EMBL:AACD01000025 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
OrthoDB:EOG4B5SFH PANTHER:PTHR10073:SF9 RefSeq:XP_659168.1
ProteinModelPortal:Q5BD16 EnsemblFungi:CADANIAT00008194
GeneID:2875649 KEGG:ani:AN1564.2 HOGENOM:HOG000158560 OMA:NGHGIPA
Uniprot:Q5BD16
Length = 867
Score = 263 (97.6 bits), Expect = 9.3e-20, Sum P(3) = 9.3e-20
Identities = 66/188 (35%), Positives = 105/188 (55%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L + V I + +I P S KEL++N+LDA AT ++V + + L+QV D+GHGI
Sbjct: 6 LPPATVRAIGSTSIISDPYSLAKELLDNALDAFATLVSVEISQDTVGLLQVKDNGHGIPA 65
Query: 85 EDLPILCERHTTSKLSKYEDLQSI--KSMGFRGEALASMTYV-GHVTVTTITKGHLHGYR 141
+D ++C+R TSK+ EDLQ + KS+GFRGEALAS + G + ++T + G
Sbjct: 66 DDYMVVCKRTFTSKIHTVEDLQKVGGKSLGFRGEALASAAELSGALNISTRVETDPVGSS 125
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKT-LQNSSDDYTKIVDLLSRMAI 199
+ Y R+G + + V GT + + NLF + RR+T ++NS KI ++ A+
Sbjct: 126 LEYGRNGELTRTERISHPV-GTTVRILNLFQQIPVRRQTAIKNSKKTLLKIKKMVQAYAM 184
Query: 200 HHTNVSFS 207
++ S
Sbjct: 185 ARPSIRLS 192
Score = 57 (25.1 bits), Expect = 9.3e-20, Sum P(3) = 9.3e-20
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 303 PKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ 345
P + PF+ + ++ D N+ P+K +V NQ+ ++ ++
Sbjct: 311 PPINDPFLCVHVLCLGGAYDANIEPSKDDVLFENQQAVLSLVE 353
Score = 41 (19.5 bits), Expect = 9.3e-20, Sum P(3) = 9.3e-20
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 411 AYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSI 449
AY+ ++ V GP L + S+ + E DL S+
Sbjct: 745 AYLIQLQNSDVPGGPKLKRISSAKLPFEKIPEEHDLHSM 783
>UNIPROTKB|Q5BD16 [details] [associations]
symbol:AN1564.2 "DNA mismatch repair protein, putative
(AFU_orthologue; AFUA_8G05820)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 EMBL:BN001307 GO:GO:0016887 EMBL:AACD01000025
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
OrthoDB:EOG4B5SFH PANTHER:PTHR10073:SF9 RefSeq:XP_659168.1
ProteinModelPortal:Q5BD16 EnsemblFungi:CADANIAT00008194
GeneID:2875649 KEGG:ani:AN1564.2 HOGENOM:HOG000158560 OMA:NGHGIPA
Uniprot:Q5BD16
Length = 867
Score = 263 (97.6 bits), Expect = 9.3e-20, Sum P(3) = 9.3e-20
Identities = 66/188 (35%), Positives = 105/188 (55%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L + V I + +I P S KEL++N+LDA AT ++V + + L+QV D+GHGI
Sbjct: 6 LPPATVRAIGSTSIISDPYSLAKELLDNALDAFATLVSVEISQDTVGLLQVKDNGHGIPA 65
Query: 85 EDLPILCERHTTSKLSKYEDLQSI--KSMGFRGEALASMTYV-GHVTVTTITKGHLHGYR 141
+D ++C+R TSK+ EDLQ + KS+GFRGEALAS + G + ++T + G
Sbjct: 66 DDYMVVCKRTFTSKIHTVEDLQKVGGKSLGFRGEALASAAELSGALNISTRVETDPVGSS 125
Query: 142 VSY-RDGVMESEPKACAAVKGTQIMVENLFYNMIARRKT-LQNSSDDYTKIVDLLSRMAI 199
+ Y R+G + + V GT + + NLF + RR+T ++NS KI ++ A+
Sbjct: 126 LEYGRNGELTRTERISHPV-GTTVRILNLFQQIPVRRQTAIKNSKKTLLKIKKMVQAYAM 184
Query: 200 HHTNVSFS 207
++ S
Sbjct: 185 ARPSIRLS 192
Score = 57 (25.1 bits), Expect = 9.3e-20, Sum P(3) = 9.3e-20
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 303 PKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ 345
P + PF+ + ++ D N+ P+K +V NQ+ ++ ++
Sbjct: 311 PPINDPFLCVHVLCLGGAYDANIEPSKDDVLFENQQAVLSLVE 353
Score = 41 (19.5 bits), Expect = 9.3e-20, Sum P(3) = 9.3e-20
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 411 AYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSI 449
AY+ ++ V GP L + S+ + E DL S+
Sbjct: 745 AYLIQLQNSDVPGGPKLKRISSAKLPFEKIPEEHDLHSM 783
>UNIPROTKB|Q753U9 [details] [associations]
symbol:AFR226C "AFR226Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
EMBL:AE016819 GenomeReviews:AE016819_GR GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 OrthoDB:EOG4B5SFH
PANTHER:PTHR10073:SF9 RefSeq:NP_985773.1 ProteinModelPortal:Q753U9
STRING:Q753U9 EnsemblFungi:AAS53597 GeneID:4622035
KEGG:ago:AGOS_AFR226C OMA:PPRIRIN PhylomeDB:Q753U9 Uniprot:Q753U9
Length = 704
Score = 266 (98.7 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 68/199 (34%), Positives = 113/199 (56%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVV--KDGGLKLIQVSDDG 79
IHR+E+ ++ + I P +AVKEL++N++DA A+++++ V K GG I V DDG
Sbjct: 3 IHRIEDESKWKVVSASFIYSPTTAVKELLDNAIDAGASNVHIEVDSKTGGCDYISVRDDG 62
Query: 80 HGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEAL---ASMT-YVGHVTVTTITKG 135
+G+ D ++C HTTSKL KYED+ + ++GFRGEAL A+++ + G + V+T K
Sbjct: 63 NGVGVVDRHMMCLNHTTSKLRKYEDVSTCGTLGFRGEALFMLATLSNHCGTMEVSTRCKS 122
Query: 136 HLHGYRVSYRDGVMESEPKACAAVK---GTQIMVENLFYNMIARRKTLQNSSDDYTKIVD 192
G R DG E + + ++V GT + + L + + AR T+ + K +D
Sbjct: 123 ERMGTRWQV-DGSGEVKEGSTSSVPMPVGTTVTIRKLLHGLRARHVTISSRP---RKSLD 178
Query: 193 LLSRMAIHHTNVSFSCRKH 211
+S++ + +T V R H
Sbjct: 179 DISQLVLQYTLVFRRIRFH 197
>UNIPROTKB|E9PC40 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122 HGNC:HGNC:9121
ChiTaRS:PMS1 IPI:IPI00386764 ProteinModelPortal:E9PC40 SMR:E9PC40
Ensembl:ENST00000409985 UCSC:uc010zfz.1 ArrayExpress:E9PC40
Bgee:E9PC40 Uniprot:E9PC40
Length = 181
Score = 238 (88.8 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 46/110 (41%), Positives = 76/110 (69%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATS++V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTIT 133
D P++ ++ TSK++ +EDL+++ + GFRGEAL S+ + V +TT T
Sbjct: 63 AVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRT 112
>UNIPROTKB|Q5XG96 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 ChiTaRS:PMS1 EMBL:BC084548
IPI:IPI00479899 SMR:Q5XG96 STRING:Q5XG96 Ensembl:ENST00000374826
HOGENOM:HOG000249052 HOVERGEN:HBG055685 Uniprot:Q5XG96
Length = 165
Score = 238 (88.8 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 46/110 (41%), Positives = 76/110 (69%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATS++V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTIT 133
D P++ ++ TSK++ +EDL+++ + GFRGEAL S+ + V +TT T
Sbjct: 63 AVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRT 112
>ZFIN|ZDB-GENE-060810-45 [details] [associations]
symbol:mlh3 "mutL homolog 3 (E. coli)" species:7955
"Danio rerio" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 ZFIN:ZDB-GENE-060810-45 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 GeneTree:ENSGT00550000074903 EMBL:BX957326
IPI:IPI00488975 Ensembl:ENSDART00000143694 Bgee:E9QGN2
Uniprot:E9QGN2
Length = 1171
Score = 262 (97.3 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 80/267 (29%), Positives = 135/267 (50%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L +V ++ +G I V+EL+ NS+DA AT + V + KL QV D+G G
Sbjct: 2 IKSLPINVQAQLRSGVAIFSLQQCVEELILNSIDAGATCVAVKIDIEACKL-QVIDNGSG 60
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGH-VTVTTITKGHLHGY 140
+ ED+ + R+ TSK S EDL ++ GFRGEA++S+ + V +++ TK + Y
Sbjct: 61 MCLEDMEKVGLRYNTSKCSSLEDLDNLHFYGFRGEAISSIVSLAEMVEISSRTKQSVKTY 120
Query: 141 RVSYRD-GVMES-EPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMA 198
S+ + +E E + GT + V NLF+NM RRK + + +I + ++
Sbjct: 121 VKSFNETNALEVFEAQTVRPSAGTTVSVYNLFHNMPVRRKRMDPVLET-ERIRQRVEAIS 179
Query: 199 IHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVF 258
+ H +VSF+ +K +A V TSS ++G++ A L ++ Y F
Sbjct: 180 LMHPSVSFTVKKENSAHMMVQLSKTSSTYYRFVQIHGLNRAQKLGEVN---YEHEQ---F 233
Query: 259 KMDGYVSNSNYVAKKTTMVLFVNDRLV 285
++ G++ + + LFVN+RL+
Sbjct: 234 QITGHIGREGHY-NNSLQFLFVNERLL 259
>UNIPROTKB|G4MRP9 [details] [associations]
symbol:MGG_04627 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR015434 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:CM001231 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF9
RefSeq:XP_003710876.1 ProteinModelPortal:G4MRP9
EnsemblFungi:MGG_04627T0 GeneID:2677851 KEGG:mgr:MGG_04627
Uniprot:G4MRP9
Length = 928
Score = 242 (90.2 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 80/251 (31%), Positives = 126/251 (50%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L + V + A VI PVS VKEL++NS+DA ATSI V+V + I+V D+G GI
Sbjct: 6 LPQDAVRLLRAHVVISTPVSVVKELLDNSIDAKATSIEVLVSRNTVDRIEVRDNGVGIET 65
Query: 85 EDLPILCERHTTSKLSKYEDLQSI--KSMGFRGEALASMTYVGHVTVTTITKGHLHGY-- 140
D L R TSKL ++L++I S+GFRGEALA++ V VTVTT T
Sbjct: 66 RDFEALGRRGHTSKLKSADELENIGGTSLGFRGEALAAVAAVAKVTVTTRTAADDTATVF 125
Query: 141 -RVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKT-LQNSSDDYTKIVDLLSRMA 198
++ G +++ K+ GT + +F + R+K ++ + K+ LL+ A
Sbjct: 126 DLLANGKGTLKNTIKSTPV--GTTVTASEMFERLPVRKKVAIKEAKSTMVKMKQLLTAYA 183
Query: 199 IHHTNVSFSCRKHGAARADVHSIATSSRL-DSIRTVYGVSVASNLVQ--LEASEYNDSSS 255
+ + S ++ G A ++ S RL +++ S+LV +E + D+S+
Sbjct: 184 LARPQLKLSIKEIGVAHP---CLSYSPRLYATMKAAAACLFGSDLVAQCVEMTHKADAST 240
Query: 256 FVFKM-DGYVS 265
+ DG VS
Sbjct: 241 RRRNLADGVVS 251
Score = 69 (29.3 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 28/127 (22%), Positives = 58/127 (45%)
Query: 266 NSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNV 325
+S V+ T+ + R +C + +++E + +A +PFI ++I P DV++
Sbjct: 287 DSRPVSASRTVFKKIYSRFKKC--ISKSLEA--SDDGKQAKEPFIALNIKCPQGSYDVSI 342
Query: 326 HPTKREVSLLNQELIVEKIQSAVE----LKLRQSNDSRTYKEQTVESSPSSPYNPSKDLH 381
P K +V +++ I++ + E L Q R+ V S S + + +
Sbjct: 343 GPAKDDVLFTDEQGIIDACDALFENTYGLSALQGETQRSSNMSLVNSVNSGEHMQNLGI- 401
Query: 382 LNPSGSK 388
L+ +GS+
Sbjct: 402 LSKNGSE 408
Score = 41 (19.5 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 11/66 (16%), Positives = 27/66 (40%)
Query: 493 ANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSEL-LMLALKEEDLDVENSENDDLKEK 551
++++SL + ++ R A ++ D P E+ A++ + + LK
Sbjct: 775 SSIISLGAPMQPEITTRALLQQEASRIDDDIPNHEMSFRAAMRNKSRSKSRRRSKRLKSS 834
Query: 552 IAEMNT 557
+ + T
Sbjct: 835 MLALET 840
>UNIPROTKB|O95744 [details] [associations]
symbol:PMS2P2 "Putative postmeiotic segregation increased
2-like protein 2" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131 GO:GO:0032407
GO:GO:0016446 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
EMBL:AB017005 IPI:IPI00032884 HSSP:P54278 ProteinModelPortal:O95744
SMR:O95744 STRING:O95744 PaxDb:O95744 PRIDE:O95744
GeneCards:GC07M074880 HGNC:HGNC:9127 neXtProt:NX_O95744
HOVERGEN:HBG108275 InParanoid:O95744 Genevestigator:O95744
Uniprot:O95744
Length = 297
Score = 230 (86.0 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 56/167 (33%), Positives = 99/167 (59%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G V+ +AVK++V NSLDA AT+I++ +KD G+ LI+VS +G G
Sbjct: 77 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 136
Query: 82 IR---YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLH 138
+ +E L + +H TSK+ ++ DL +++ GF+G+AL+S+ + VT++T
Sbjct: 137 VEEENFEGLSLSALKHHTSKIREFADLTRVETFGFQGKALSSLCALSDVTISTCHVSAKV 196
Query: 139 GYRVSY-RDG-VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNS 183
G R+ + DG +++ P +GT + V+ LF + R K Q +
Sbjct: 197 GTRLVFDHDGKIIKKTPYPHP--RGTTVSVKQLFSTLPVRHKEFQRN 241
>UNIPROTKB|G3N1K7 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
Pfam:PF02518 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 GeneTree:ENSGT00530000063289
EMBL:DAAA02058333 Ensembl:ENSBTAT00000065929 Uniprot:G3N1K7
Length = 180
Score = 225 (84.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 46/100 (46%), Positives = 73/100 (73%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G+V+ +AVKELVENS+DA ATSI++ +KD G++LI+VSD+G G
Sbjct: 77 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 136
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASM 121
+ E+ L +H TSK+ ++ DL +++ GFRGEAL+S+
Sbjct: 137 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSL 176
>UNIPROTKB|F8W8L1 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
Pfam:PF02518 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468
GO:GO:0030983 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00917668
ProteinModelPortal:F8W8L1 SMR:F8W8L1 Ensembl:ENST00000342075
ArrayExpress:F8W8L1 Bgee:F8W8L1 Uniprot:F8W8L1
Length = 108
Score = 224 (83.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 43/104 (41%), Positives = 72/104 (69%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATS++V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHV 127
D P++ ++ TSK++ +EDL+++ + GFRGEAL S+ + V
Sbjct: 63 AVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEV 106
>UNIPROTKB|A4D2B8 [details] [associations]
symbol:PMS2P1 "Putative postmeiotic segregation increased
2-like protein 1" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0016301 GO:GO:0006298 EMBL:CH236956 EMBL:CH471091
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
EMBL:U38964 EMBL:AB017004 EMBL:BC067809 EMBL:BC110395 EMBL:D38435
EMBL:D38499 IPI:IPI00477733 IPI:IPI00871484 IPI:IPI00953669
PIR:JC2398 PIR:JC2399 UniGene:Hs.634244 UniGene:Hs.661055
ProteinModelPortal:A4D2B8 SMR:A4D2B8 STRING:A4D2B8
PhosphoSite:A4D2B8 DMDM:74706301 PaxDb:A4D2B8 PRIDE:A4D2B8
GeneCards:GC07M099899 HGNC:HGNC:9123 MIM:605038 neXtProt:NX_A4D2B8
HOVERGEN:HBG108273 InParanoid:Q13400 ChiTaRS:PMS2P1
Genevestigator:A4D2B8 Uniprot:A4D2B8
Length = 440
Score = 239 (89.2 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 58/164 (35%), Positives = 96/164 (58%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G V+ +AVKELVENSLDA AT+I++ +KD G+ LI+VS +G G
Sbjct: 215 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 274
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ E+ L +H TSK+ ++ DL +++ GFRGEAL+S+ + VT++T G R
Sbjct: 275 VEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTISTCHVSAKVGTR 334
Query: 142 VSYRD-G-VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNS 183
+ + G +++ P +G + V+ LF + K Q +
Sbjct: 335 LVFDHYGKIIQKTPYPHP--RGMTVSVKQLFSTLPVHHKEFQRN 376
>UNIPROTKB|E1C7F3 [details] [associations]
symbol:LOC100859200 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:AADN02003465 IPI:IPI00593431
ProteinModelPortal:E1C7F3 Ensembl:ENSGALT00000016763 Uniprot:E1C7F3
Length = 1424
Score = 244 (91.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 80/279 (28%), Positives = 135/279 (48%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L E V R+ +G + V+ELV NS+DA AT + V V K IQV D+G G
Sbjct: 2 IKHLAEDVQARLRSGVTVTSLGQCVEELVLNSIDAKATCVAVRVDLEAFK-IQVVDNGSG 60
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVT-VTTITKGHLHGY 140
+ EDL + +R+ TSK S DL+ + GFRGEALAS+ + V V++ + +
Sbjct: 61 MGKEDLSKMGKRYFTSKCSSVADLEKLTFYGFRGEALASIANMASVVEVSSKSSKTAKTF 120
Query: 141 RVSYRDG-VME-SEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMA 198
+ +G +E E + GT + V NLFY + RR+ + + + ++ + ++
Sbjct: 121 VKLFHNGHALEVCEAELSRPSGGTTVTVCNLFYQLPVRRRCMDPVLE-FERVRQKVEAIS 179
Query: 199 IHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVF 258
+ H +VS S R + + T +YG+ + L +++ + S F
Sbjct: 180 LMHPSVSLSLRNDISCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREIK----HKSGGF-- 233
Query: 259 KMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIV 297
++ GY+S+ + K L+VN RLV L + ++ +
Sbjct: 234 EISGYISSEGHY-NKNMQFLYVNRRLVLKTRLHKLIDFL 271
>UNIPROTKB|Q7SCN8 [details] [associations]
symbol:NCU09373 "Predicted protein" species:367110
"Neurospora crassa OR74A" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 SMART:SM00387 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073 OrthoDB:EOG4B5SFH
PANTHER:PTHR10073:SF9 HSSP:P54278 EMBL:AABX02000082
RefSeq:XP_963744.1 UniGene:Ncr.24641 ProteinModelPortal:Q7SCN8
EnsemblFungi:EFNCRT00000009482 GeneID:3879893 KEGG:ncr:NCU09373
Uniprot:Q7SCN8
Length = 772
Score = 216 (81.1 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 69/237 (29%), Positives = 119/237 (50%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L E + + VI P+ VKEL++N+LDA AT++ +++ + ++V D+G GI
Sbjct: 6 LPEDTRRFLGSALVITSPIFLVKELLDNALDAGATTVEILISPNTVDRVEVRDNGSGISP 65
Query: 85 EDLPILCERHTTSKLSKYEDLQSI--KSMGFRGEALASMTYVGHVTVTTITKGHLHGYRV 142
D L TSKLS +DL+S+ KS+GFRG ALAS + + + T T +
Sbjct: 66 SDFHHLGRPGHTSKLSSLKDLESVGCKSLGFRGVALASAAALAGIAICTRTSAESVATIL 125
Query: 143 SY-RDGVMESEPKACAAVKGTQIMVENLF--YNMIARRKTLQNSSDDYTKIVDLLSRMAI 199
+ R+GV + A GT + V +LF Y + +R T + ++ K+ LL A+
Sbjct: 126 HFSREGVAAARGHKPAPA-GTSVCVTDLFGAYPVRLKRATSEATAT-VLKVKGLLECYAL 183
Query: 200 HHTNVSFSCRKHGAARADVHSIATSSRL-DSIRTVYGVSVASNLVQLEASEYNDSSS 255
V S + G ++ + + + L D++ V G +A+ + L+ S ++ S +
Sbjct: 184 ARPQVKLSFKVLGGKQSWSYVPTSGAALKDAVVQVMGRELAAQCM-LQTSPFSVSDT 239
Score = 73 (30.8 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 308 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQS-AVELKLRQSNDSRTYKEQTV 366
PFI ++I P D NV P+K +V N+EL++ + +S + + + ND+
Sbjct: 321 PFIRLNIRCPLGSYDPNVEPSKYDVLFHNEELVLREFESFLLSIYPAKHNDAGPSSMDLS 380
Query: 367 ESSPSSPYNPS-KDLHLNPSGSKLQKVPVNKMVRTDSSDP 405
+ Y+ D H++ ++ K TD P
Sbjct: 381 TEANGCVYDTGVADEHISTPQTQTGKGAAPTTPPTDEEPP 420
Score = 43 (20.2 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 654 KNPVDIERYPNDAGMAI 670
+ P D YP DAG ++
Sbjct: 539 RRPADRRSYPTDAGRSL 555
>UNIPROTKB|C9JZ54 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 EMBL:AC006583 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
IPI:IPI00783078 ProteinModelPortal:C9JZ54 SMR:C9JZ54 STRING:C9JZ54
Ensembl:ENST00000429117 ArrayExpress:C9JZ54 Bgee:C9JZ54
Uniprot:C9JZ54
Length = 83
Score = 213 (80.0 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 41/79 (51%), Positives = 58/79 (73%)
Query: 116 EALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIA 175
EALAS+++V HVT+TT T YR SY DG +++ PK CA +GTQI VE+LFYN+
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 176 RRKTLQNSSDDYTKIVDLL 194
RRK L+N S++Y KI++++
Sbjct: 64 RRKALKNPSEEYGKILEVV 82
>UNIPROTKB|G3V419 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 EMBL:AL049780
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V419 SMR:G3V419 Ensembl:ENST00000556257
ArrayExpress:G3V419 Bgee:G3V419 Uniprot:G3V419
Length = 1275
Score = 236 (88.1 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 72/276 (26%), Positives = 131/276 (47%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L V ++ +G I V+EL NS+DA+A + V V + +QV D+G G+
Sbjct: 5 LSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGFGMGS 63
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGH-LHGYRVS 143
+D+ + R+ TSK +DL++ + GFRGEALA++ + + K + +
Sbjct: 64 DDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTFVKL 123
Query: 144 YRDG--VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
++ G + E A GT + V NLFY + RRK + + + K+ + +++ H
Sbjct: 124 FQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMDPRLE-FEKVRQRIEALSLMH 182
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
++SFS R + + T +YG+ + L ++ + +Y + F++
Sbjct: 183 PSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREI-SFKYKE-----FELS 236
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIV 297
GY+S+ + K LFVN RLV L + ++ +
Sbjct: 237 GYISSEAHY-NKNMQFLFVNKRLVLRTKLHKLIDFL 271
>UNIPROTKB|Q9UHC1 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005712 "chiasma"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=NAS;IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=NAS;IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003696 "satellite
DNA binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0016887 GO:GO:0006298
GO:GO:0019237 Reactome:REACT_111183 GO:GO:0001673 GO:GO:0003697
EMBL:AL049780 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
MIM:114500 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0007130 Orphanet:144 GO:GO:0003696 GO:GO:0007144
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AF195657 EMBL:AF195658
EMBL:AB039667 EMBL:AY963685 EMBL:L40399 IPI:IPI00005811
IPI:IPI00218050 RefSeq:NP_001035197.1 UniGene:Hs.436650
ProteinModelPortal:Q9UHC1 SMR:Q9UHC1 IntAct:Q9UHC1 STRING:Q9UHC1
PhosphoSite:Q9UHC1 DMDM:13878584 PaxDb:Q9UHC1 PRIDE:Q9UHC1
DNASU:27030 Ensembl:ENST00000238662 Ensembl:ENST00000355774
Ensembl:ENST00000556740 GeneID:27030 KEGG:hsa:27030 UCSC:uc001xrd.1
UCSC:uc001xre.1 CTD:27030 GeneCards:GC14M075481 HGNC:HGNC:7128
MIM:604395 MIM:614385 neXtProt:NX_Q9UHC1 PharmGKB:PA30845
HOGENOM:HOG000140944 HOVERGEN:HBG006375 InParanoid:Q9UHC1 KO:K08739
OMA:HGAIKFN PhylomeDB:Q9UHC1 ChiTaRS:MLH3 GenomeRNAi:27030
NextBio:49558 ArrayExpress:Q9UHC1 Bgee:Q9UHC1 CleanEx:HS_MLH3
Genevestigator:Q9UHC1 GermOnline:ENSG00000119684 Uniprot:Q9UHC1
Length = 1453
Score = 236 (88.1 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 72/276 (26%), Positives = 131/276 (47%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L V ++ +G I V+EL NS+DA+A + V V + +QV D+G G+
Sbjct: 5 LSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGFGMGS 63
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGH-LHGYRVS 143
+D+ + R+ TSK +DL++ + GFRGEALA++ + + K + +
Sbjct: 64 DDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTFVKL 123
Query: 144 YRDG--VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHH 201
++ G + E A GT + V NLFY + RRK + + + K+ + +++ H
Sbjct: 124 FQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMDPRLE-FEKVRQRIEALSLMH 182
Query: 202 TNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMD 261
++SFS R + + T +YG+ + L ++ + +Y + F++
Sbjct: 183 PSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREI-SFKYKE-----FELS 236
Query: 262 GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIV 297
GY+S+ + K LFVN RLV L + ++ +
Sbjct: 237 GYISSEAHY-NKNMQFLFVNKRLVLRTKLHKLIDFL 271
>RGD|1309227 [details] [associations]
symbol:Mlh3 "mutL homolog 3 (E. coli)" species:10116 "Rattus
norvegicus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000795 "synaptonemal complex" evidence=ISO;IBA] [GO:0001673
"male germ cell nucleus" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005712 "chiasma"
evidence=ISO;IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=ISO;IBA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007130
"synaptonemal complex assembly" evidence=IEA;ISO] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007140 "male
meiosis" evidence=IEA;ISO] [GO:0007144 "female meiosis I"
evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0019237
"centromeric DNA binding" evidence=IEA;ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 RGD:1309227
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0016887
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 GO:GO:0003697
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0007130
EMBL:CH473982 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 CTD:27030
KO:K08739 GeneTree:ENSGT00550000074903 IPI:IPI00877366
RefSeq:NP_001101513.1 UniGene:Rn.119254 Ensembl:ENSRNOT00000033493
GeneID:314320 KEGG:rno:314320 UCSC:RGD:1309227 OrthoDB:EOG4K9BB9
NextBio:667464 Uniprot:D4ADG4
Length = 1442
Score = 233 (87.1 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 73/279 (26%), Positives = 133/279 (47%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L + V ++ +G + V+EL NS+DA+AT + + V + +QV D+G G
Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQ-VQVIDNGLG 60
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGH-VTVTTITKGHLHGY 140
+ +D+ + R+ TSK DL++ GFRGEALAS+ + V +++ L +
Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPTFYGFRGEALASIADMASAVEISSKKSTTLKTF 120
Query: 141 RVSYRDG--VMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMA 198
+++G + E GT + V NLFY RRK++ + + K+ + ++
Sbjct: 121 VKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSMDPRLE-FEKVRQRVEALS 179
Query: 199 IHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVF 258
+ H ++SFS R + + T +YG+ + L ++ +Y + F
Sbjct: 180 LMHPSISFSLRNDVSGSMILQLPKTKDICSRFCQIYGLGKSQKLREIHY-KYKE-----F 233
Query: 259 KMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIV 297
+ +GY+S+ + K LFVN RLV L + ++ +
Sbjct: 234 EFNGYISSEAHY-NKNMQFLFVNRRLVLRTKLHKLIDFL 271
>UNIPROTKB|E2QZJ2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019237 "centromeric DNA binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0007140 "male
meiosis" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0006298 GO:GO:0019237
GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:AAEX03005855
Ensembl:ENSCAFT00000026947 Uniprot:E2QZJ2
Length = 1424
Score = 242 (90.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 78/282 (27%), Positives = 136/282 (48%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I L V R+ +G I V+ELV NS+DA+A + V V + +QV D+G G
Sbjct: 2 IECLSVEVQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQ-VQVIDNGFG 60
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGH-LHGY 140
+ +D+ + R+ TSK + +DL++ + GFRGEALAS+ + + K + +
Sbjct: 61 MGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKKNRTMKTF 120
Query: 141 RVSYRDGVMESEPKACAA-----VKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLS 195
+++G KAC A GT + V NLFY + RRK + + + K+ +
Sbjct: 121 VKLFQNG---KALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCMDPRLE-FEKVRQRIE 176
Query: 196 RMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSS 255
+++ H ++SFS R + + T +YG+ + L +++ +Y +
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQVPKTKDVCSRFCQIYGLGKSQKLREIKF-KYKE--- 232
Query: 256 FVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIV 297
F++ GY+S+ + K LFVN RLV L + ++ +
Sbjct: 233 --FELSGYISSEAHY-NKNMQFLFVNKRLVLRTKLHKFIDFL 271
Score = 42 (19.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 344 IQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSK 388
++S+++ K ++S ++QT E S S K L L + S+
Sbjct: 458 MESSLQTKDSSCSESGILEQQTAEVSESGENEKHKKLCLELNSSE 502
Score = 41 (19.5 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 319 EHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPS- 377
E ++ KR+ ++ N+ E + ++ +++NDS Y ++V+ S S S
Sbjct: 405 EMFNIQSKAVKRKATIENRRN-TENSRDLEGIR-KKTNDSFLYNYESVDPSHSKVMESSL 462
Query: 378 --KDLHLNPSG 386
KD + SG
Sbjct: 463 QTKDSSCSESG 473
>UNIPROTKB|Q75F21 [details] [associations]
symbol:AAL093C "AAL093Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 InterPro:IPR020568
SUPFAM:SSF54211 EMBL:AE016814 GenomeReviews:AE016814_GR
GO:GO:0007131 GO:GO:0032407 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 KO:K08739
OMA:KACRSAI OrthoDB:EOG46X2HJ RefSeq:NP_982449.1
ProteinModelPortal:Q75F21 STRING:Q75F21 EnsemblFungi:AAS50273
GeneID:4618574 KEGG:ago:AGOS_AAL093C PhylomeDB:Q75F21
Uniprot:Q75F21
Length = 734
Score = 234 (87.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 83/280 (29%), Positives = 137/280 (48%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
IHRLEESV R+ + I +AV+EL++NS+DA + V V D + V DDG G
Sbjct: 9 IHRLEESVFLRLRSQLSIVSVGAAVRELMQNSVDACCGRLEVSV-DLDRWRVHVRDDGEG 67
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHG-- 139
+ E+L + + H TSKL + EDL + + GFRGE L ++ + V + + G H
Sbjct: 68 LNREELAKVGQWHYTSKLRRLEDLTATDTYGFRGEGLYMLSNISRVILLSKRAGMKHAAL 127
Query: 140 YRVSYRDGVM--ESEP-KACAAVKGTQIMVENLFYNMIARRKTLQNSSDD--YTKI-VDL 193
+R+ D + +S+ + GT +++E+LFYN+ RR+ L + Y +I D+
Sbjct: 128 HRLPATDNALPRDSDDIRLLDGAHGTTVILEDLFYNLPIRRRMLARTPPHRLYDEIRADV 187
Query: 194 LSRMAIHHT-NVSFSCRKHGAARADVHS--IATSSRLDSIRTVY----GVSVASNLVQLE 246
L + T VS K+ + V S + + D++ V G VA+ +Q
Sbjct: 188 LQLLLFCQTLQVSVLVIKNNQEKQIVRSGNLTQLTFPDTLMAVLMCCLGPVVAAKDLQYV 247
Query: 247 ASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVE 286
+++Y D ++ G +S V K +++N R E
Sbjct: 248 SAKYQD-----IEVQGVISTVG-VPSKDYQFIYINKRRYE 281
Score = 40 (19.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 380 LHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRN 439
L L PS S+ P+ ++ ++D +L AY + T + + P+ S+ +
Sbjct: 507 LKLEPSRSRT--TPLLLILDQHAADERVKLEAYTRDYLFTLLTAQPSFYTTPCSIAM--D 562
Query: 440 LNET-ADL 446
L T AD+
Sbjct: 563 LTHTEADI 570
>UNIPROTKB|E1BNK2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:DAAA02029619 IPI:IPI00924115
Ensembl:ENSBTAT00000061421 ArrayExpress:E1BNK2 Uniprot:E1BNK2
Length = 1452
Score = 231 (86.4 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 74/279 (26%), Positives = 134/279 (48%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L V R+ +G + V+EL NS+DA+A + V V + +QV D+G G+
Sbjct: 5 LSAEVQARLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGFGMGS 63
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGH-VTVTTITKGHLHGYRVS 143
+D+ + R+ TSK + +DL++ + GFRGEALAS+ + V +++ + +
Sbjct: 64 DDVDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKKNKSMKTFVKL 123
Query: 144 YRDGVMESEPKACAA-----VKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMA 198
+++G KAC A GT + V NLFY + RRK + + + K+ + ++
Sbjct: 124 FQNG---KALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCMDPRLE-FEKVRQRIEALS 179
Query: 199 IHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVF 258
+ H +SFS R + + T +YG+ + L ++ +Y + F
Sbjct: 180 LMHPTISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINF-KYKE-----F 233
Query: 259 KMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIV 297
++ G++S+ + K LFVN RLV L + ++ +
Sbjct: 234 ELTGFISSEAHY-NKNMQFLFVNKRLVLRTKLHKLIDFL 271
Score = 48 (22.0 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 39/146 (26%), Positives = 62/146 (42%)
Query: 430 VRSSVRQRRNLNETADLT-SIQELIDDVDRNCHSGLLDIVRHCSFIGMA-DDVYALLQHN 487
+ + V + L T +L+ ++ I D+N H DI C M +D Y Q
Sbjct: 770 LNTEVEENNTLEITTNLSPQVEADIPWKDKN-HLDNSDI---CEITTMKYNDSYGSCQPV 825
Query: 488 THMYLANVVSLSKE---LMYQLV--------LRRFAHFNAIQLS-DPAPLSELLMLALKE 535
HM+ + + SKE L Q++ L+ HFN+ L + +P S LA K
Sbjct: 826 NHMFSSEKLPFSKEDDCLEQQMLCLTESTVTLQELPHFNSKFLDVEKSPES----LASKL 881
Query: 536 EDLDVENSENDDLKEKIAEMNTELLK 561
L + SE + + + N ELL+
Sbjct: 882 SRL--KGSERETQRMDVNHFN-ELLQ 904
Score = 41 (19.5 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 518 QLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTE 558
Q+ P LS +LM +++ D +N +E IA +E
Sbjct: 994 QIGSPDSLSRMLMSRVEDSTAD-QNGTCFQSEESIARTCSE 1033
>UNIPROTKB|F1S2R6 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:CT737372
Ensembl:ENSSSCT00000002644 Uniprot:F1S2R6
Length = 1427
Score = 232 (86.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 77/280 (27%), Positives = 137/280 (48%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L V R+ +G I V+EL NS+DA+A + V V + +QV D+G G+
Sbjct: 5 LSVEVQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGIGMGS 63
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGH-VTVTTITKGHLHGYRVS 143
ED+ + R+ TSK + +DL++ + GFRGEALAS+ + V +++ + +
Sbjct: 64 EDVDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSRRNKSMKTFVKL 123
Query: 144 YRDGVMESEPKACAA-----VKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMA 198
+++G KAC A GT + V NLFY + RRK + + + K+ + ++
Sbjct: 124 FQNG---KALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCMDPRLE-FEKVRQRVEALS 179
Query: 199 IHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVF 258
+ H +VSFS R + + T +YG+ + L ++ +Y + F
Sbjct: 180 LMHPSVSFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINF-KYKE-----F 233
Query: 259 KMDGYVS-NSNYVAKKTTMVLFVNDRLVECAPLKRAVEIV 297
+++G++S ++Y K LFVN RL+ L + ++ +
Sbjct: 234 ELNGFISAEAHY--NKNMQFLFVNKRLILRTKLHKLIDFL 271
Score = 45 (20.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 525 LSELLMLALKEEDLDVENSENDDLKE 550
+ E + + LK+E L VE S N+D+KE
Sbjct: 340 IQEGVKMFLKKEKLFVELS-NEDIKE 364
Score = 41 (19.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 371 SSPYNPSKDLHLNPS 385
SSP+N ++H N S
Sbjct: 947 SSPFNKDSEMHSNNS 961
Score = 41 (19.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 345 QSAVELKLRQSNDSRTYKEQTVESS-PSSPYNPSKD-LHLNPS 385
+S+++ + ++SR +++TVE+S P K L LN S
Sbjct: 458 ESSLQNEDSACSESRILEQETVEASEPGENEKDKKSCLELNSS 500
>DICTYBASE|DDB_G0283883 [details] [associations]
symbol:mlh3 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283883 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AAFI02000057 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073
KO:K08739 RefSeq:XP_638891.4 EnsemblProtists:DDB0232420
GeneID:8624288 KEGG:ddi:DDB_G0283883 InParanoid:Q54QI0 OMA:NECNIPF
Uniprot:Q54QI0
Length = 1658
Score = 189 (71.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 39/114 (34%), Positives = 73/114 (64%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L+E V ++ + VI A++E++ NS+DA AT I++ + L +V D+G G
Sbjct: 25 IKKLKEEVSLKVRSSVVIVSLEQAIEEIIFNSIDARATVISISINLSNLSF-EVKDNGFG 83
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKG 135
+ YE+L + +R+ TSK++ DL+S+K+ G+RGE+LAS++ + + + + + G
Sbjct: 84 LSYENLKFVGDRNCTSKINSLSDLKSLKTFGYRGESLASLSNISSLDIISNSFG 137
Score = 84 (34.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 37/171 (21%), Positives = 74/171 (43%)
Query: 161 GTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHS 220
GT + + +LF N RR+ L + + I + +A+ + FS + + +
Sbjct: 186 GTIVKIRDLFKNYPVRRQGLYHPNLKLI-IKKRIEIIALSFPKIVFSVYDETKSLTILKT 244
Query: 221 IATSSRLDSIRTVYGVSVASNLVQLEASEYNDSS---SFVFKMDGYVSNSNYVA--KKTT 275
+S L + YG + + L + + YN+++ S + + GY+S+ + K+
Sbjct: 245 PKDTSFLSYFKHFYGQEMMNKLEYVTSENYNNTTNNNSSSYYLSGYLSSPHKKGHPNKSF 304
Query: 276 MVLFVNDRLVECAPLKRAVEIVYAA--TFPKASKPFIYMSIVLPPEHVDVN 324
+++N+R+V L R V +Y F K +S + E +D N
Sbjct: 305 QYIYLNNRIVLNTKLHRHVNQLYQKYRLFNATRKANANVSKIAKKEVIDSN 355
Score = 55 (24.4 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 395 NKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELID 454
N + T D G Y S + S N+ +SV Q N+ E D +Q D
Sbjct: 458 NVVQDTQEDDGDGFDMGYSSSIDEDEIMSSQNVRG--TSVDQDNNIYENEDHQGMQIGFD 515
Query: 455 DVDRN 459
D+D N
Sbjct: 516 DLDNN 520
Score = 50 (22.7 bits), Expect = 5.5e-14, Sum P(4) = 5.5e-14
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 364 QTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVR 399
Q ++ SP S Y+ S ++ PS L +P ++ R
Sbjct: 634 QIIDQSPQSSYDESIEVTQQPSTLPLSPIPSPRIHR 669
Score = 44 (20.5 bits), Expect = 5.2e-10, Sum P(4) = 5.2e-10
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 139 GYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 171
G+ + Y + E E + V+GT + +N Y
Sbjct: 470 GFDMGYSSSIDEDEIMSSQNVRGTSVDQDNNIY 502
Score = 41 (19.5 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 531 LALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEE 569
L +KEE + E + KEK E EL K+K E+ +E
Sbjct: 1298 LFIKEE----KEKEKEKEKEKEKEKEKELEKEK-ELEKE 1331
Score = 40 (19.1 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 518 QLSDPA-PLSELLMLALKEEDLDVEN-SEND--DLKEKIAEMNTELLKQKAE 565
Q S P+ PLS+ + + ++ +N +ND D EK +++ + K K E
Sbjct: 1023 QSSPPSSPLSQPIKSIISQQTTPPKNVRKNDIFDEDEKSNTLSSPIKKLKTE 1074
Score = 39 (18.8 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 527 ELLMLALKEEDLDVENSENDDLKEK 551
+L + + +D D E N+D KEK
Sbjct: 832 QLAIYKNESDDDDEEEDNNNDDKEK 856
Score = 37 (18.1 bits), Expect = 4.4e-14, Sum P(4) = 4.4e-14
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 535 EEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKID 576
++ L + +E+DD E+ N + K+K ++ F ID
Sbjct: 830 DKQLAIYKNESDDDDEEEDNNNDDKEKRKYQLKVSTFREVID 871
>SGD|S000004025 [details] [associations]
symbol:MLH2 "Protein involved in mismatch repair and meiotic
recombination" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006298 "mismatch repair"
evidence=IEA;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 SGD:S000004025
Prosite:PS00058 GO:GO:0005524 EMBL:BK006945 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 EMBL:Z73207
PIR:S64862 RefSeq:NP_013135.1 ProteinModelPortal:Q07980 SMR:Q07980
DIP:DIP-2413N IntAct:Q07980 MINT:MINT-502091 STRING:Q07980
PRIDE:Q07980 EnsemblFungi:YLR035C GeneID:850722 KEGG:sce:YLR035C
CYGD:YLR035c HOGENOM:HOG000113599 OrthoDB:EOG4B5SFH NextBio:966802
Genevestigator:Q07980 GermOnline:YLR035C PANTHER:PTHR10073:SF9
Uniprot:Q07980
Length = 695
Score = 223 (83.6 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 60/206 (29%), Positives = 107/206 (51%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKD--GGLKLIQVSDDG 79
IH+L +I + I PV+AV+EL++NS+D+ A + + V GG + I V DDG
Sbjct: 3 IHQLSPESQWKIVSSSFIYGPVAAVRELLDNSIDSGAKKVFIDVDSTTGGCEYISVKDDG 62
Query: 80 HGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYV----GHVTVTTITKG 135
G+ D P +C +TTSK+S D+ + ++GFRGEAL ++ + G + V T T
Sbjct: 63 SGVDIIDRPSMCLEYTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKTAD 122
Query: 136 HLHGYR--VSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSS-DDYTKIVD 192
+ G + V + G+ + + GT +++ L + AR + + + +++
Sbjct: 123 DVIGEKWLVDSKGGITNGKRYKVSCPVGTTVILRKLLGGLRARYLEISSRPRKTFDELIY 182
Query: 193 LLSRMAIHHTNVSF-----SCRKHGA 213
L++ ++ H N+ F S +K+GA
Sbjct: 183 LINHYSLIHRNIRFYFSLVSLQKNGA 208
Score = 41 (19.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 14/58 (24%), Positives = 32/58 (55%)
Query: 537 DLDVENSENDDLKEKIAEMNTELLKQKAEML-EEYFCVKIDTRGNLSRLPIILDQYTP 593
D+++E +ND + K E+ + ++ K ++L EE ++ + G+ P I ++ +P
Sbjct: 327 DVNIEPEKND-VMIKSFEVIFKKIENKLKLLLEERIGIETNMLGDKHVQPSINEKTSP 383
>UNIPROTKB|I3L0B5 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 HGNC:HGNC:9122
ProteinModelPortal:I3L0B5 SMR:I3L0B5 Ensembl:ENST00000382322
Bgee:I3L0B5 Uniprot:I3L0B5
Length = 815
Score = 216 (81.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 68/230 (29%), Positives = 115/230 (50%)
Query: 58 ATSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEA 117
A S +KD G+ LI+VSD+G G+ E+ L +H TSK+ ++ DL +++ GFRGEA
Sbjct: 4 AESSRSKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEA 63
Query: 118 LASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVENLFYNMIA 175
L+S+ + VT++T G R+ + +G +++ P +GT + V+ LF +
Sbjct: 64 LSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYP--RPRGTTVSVQQLFSTLPV 121
Query: 176 RRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH---GAARADVHSIATSSRLDSIR 231
R K Q N +Y K+V +L I + SC G + V + + S ++I
Sbjct: 122 RHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIG 181
Query: 232 TVYGVSVASNL---VQLEAS-----EY----NDSSSFVFKMDGYVSNSNY 269
+V+G +L VQL S EY +D+ +F + G++S +
Sbjct: 182 SVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTH 231
>SGD|S000006085 [details] [associations]
symbol:MLH3 "Protein involved in mismatch repair and meiotic
recombination" species:4932 "Saccharomyces cerevisiae" [GO:0005712
"chiasma" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IPI] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0030983 "mismatched DNA binding"
evidence=IEA;IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 SGD:S000006085 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 EMBL:BK006949 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:X96770 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 KO:K08739 EMBL:Z73520 PIR:S65175
RefSeq:NP_015161.1 ProteinModelPortal:Q12083 SMR:Q12083
DIP:DIP-2414N IntAct:Q12083 MINT:MINT-678752 STRING:Q12083
EnsemblFungi:YPL164C GeneID:855939 KEGG:sce:YPL164C CYGD:YPL164c
GeneTree:ENSGT00550000074903 HOGENOM:HOG000113600 OMA:KACRSAI
OrthoDB:EOG46X2HJ NextBio:980696 Genevestigator:Q12083
GermOnline:YPL164C Uniprot:Q12083
Length = 715
Score = 210 (79.0 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 64/195 (32%), Positives = 105/195 (53%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I +L+ V R+ + SAV+E+V+NS+DA AT+I+V++ L V DDG G
Sbjct: 5 IRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSFA-VYDDGIG 63
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
+ DL IL ++ TSK+ K DL ++K+ G+RG+AL S++ V ++ V + K + +
Sbjct: 64 LTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKKDYNSAWM 123
Query: 142 VSYRD-GVMESE----P-----KAC--AAVK-GTQIMVENLFYNMIARRKTLQNSSD--D 186
+ VM SE P K C + K GT ++VE++ YN+ RR+ L+
Sbjct: 124 RKFPSKSVMLSENTILPIDPFWKICPWSRTKSGTVVIVEDMLYNLPVRRRILKEEPPFKT 183
Query: 187 YTKI-VDLLSRMAIH 200
+ I D+L + +H
Sbjct: 184 FNTIKADMLQILVMH 198
>UNIPROTKB|H0Y793 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
ProteinModelPortal:H0Y793 Ensembl:ENST00000458009 Uniprot:H0Y793
Length = 95
Score = 176 (67.0 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 241 NLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYA 299
N V E E + + FKM+GY+SN+NY KK +LF+N RLVE L++A+E VYA
Sbjct: 3 NAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYA 62
Query: 300 ATFPKASKPFIYMSI 314
A PK + PF+Y+ +
Sbjct: 63 AYLPKNTHPFLYLRL 77
>UNIPROTKB|G3V3E0 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008104 GO:GO:0003682
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 EMBL:AL049780
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
GO:GO:0007130 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V3E0 SMR:G3V3E0 Ensembl:ENST00000553263
ArrayExpress:G3V3E0 Bgee:G3V3E0 Uniprot:G3V3E0
Length = 162
Score = 165 (63.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L V ++ +G I V+EL NS+DA+A + V V + +QV D+G G+
Sbjct: 5 LSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGFGMGS 63
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGH-LHGYRVS 143
+D+ + R+ TSK +DL++ + GFRGEALA++ + + K + +
Sbjct: 64 DDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTFVKL 123
Query: 144 YRDG--VMESEPKACAAVKGTQIMVENLFYNMIARRKTL 180
++ G + E A GT + V NLFY + RRK +
Sbjct: 124 FQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM 162
>UNIPROTKB|E9PC65 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00873522
ProteinModelPortal:E9PC65 SMR:E9PC65 Ensembl:ENST00000424307
UCSC:uc010zgb.1 ArrayExpress:E9PC65 Bgee:E9PC65 Uniprot:E9PC65
Length = 711
Score = 122 (48.0 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 57/247 (23%), Positives = 111/247 (44%)
Query: 116 EALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVENLFY 171
+A A+ V V +TT T + Y DG ++ +P +GT + LF
Sbjct: 34 DAGATSVDVKLVLITTRTAAD--NFSTQYVLDGSGHILSQKPSHLG--QGTTVTALRLFK 89
Query: 172 NMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD 228
N+ R++ T + D+ KI DLL I ++ H A S + ++
Sbjct: 90 NLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLRIVF-VHNKAVIWQKSRVSDHKM- 147
Query: 229 SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYV----SNSNYVAKKTT--MVLFVND 282
++ +V G +V +N+ E+ +Y+ S ++ + G++ ++ ++ + T +F+N
Sbjct: 148 ALMSVLGTAVMNNM---ESFQYHSEESQIY-LSGFLPKCDADHSFTSLSTPERSFIFINS 203
Query: 283 RLVECAPLKRAVEIVYAATFPKASK---PFIYMSIVLPPEHVDVNVHPTKREVSLLNQEL 339
R V + + + Y K S P ++ I +P VDVN+ P K +V L N+E
Sbjct: 204 RPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKES 263
Query: 340 IVEKIQS 346
++ +++
Sbjct: 264 VLIALEN 270
Score = 93 (37.8 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINV 63
+L + V +++ ++I VS VKEL+ENSLDA ATS++V
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDV 42
Score = 56 (24.8 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 485 QHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSE 544
+H L+N L + L Q+ RR + +Q+ P + L + K+ +D+E +
Sbjct: 604 KHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQI--PFSMKNLKINFKKQNKVDLEEKD 661
Query: 545 NDDLKEKIAEMNTELLKQKAEML 567
L + + L+ K E++
Sbjct: 662 EPCLIHNLRFPDAWLMTSKTEVM 684
Score = 43 (20.2 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 329 KREVSLLNQELIVEKIQSAVELKLRQSN 356
K + SL NQ + E +QS +E K R N
Sbjct: 606 KLKTSLSNQPKLDELLQSQIE-KRRSQN 632
Score = 40 (19.1 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 525 LSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEM 566
+ EL +EE L E DL+ ++M ++Q+++M
Sbjct: 544 IEELWKTLSEEEKLKYEEKATKDLERYNSQMK-RAIEQESQM 584
>UNIPROTKB|C9J4L1 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00917898
ProteinModelPortal:C9J4L1 SMR:C9J4L1 STRING:C9J4L1
Ensembl:ENST00000420421 ArrayExpress:C9J4L1 Bgee:C9J4L1
Uniprot:C9J4L1
Length = 73
Score = 143 (55.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 24 RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIR 83
+L + V +++ ++I VS VKEL+ENSLDA ATS++V +++ G I+V D+G GI+
Sbjct: 3 QLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIK 62
Query: 84 YEDLPILCERH 94
D P++ ++
Sbjct: 63 AVDAPVMAMKY 73
>UNIPROTKB|Q13401 [details] [associations]
symbol:PMS2P3 "Putative postmeiotic segregation increased
2-like protein 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001909 InterPro:IPR003594 Pfam:PF01352 PROSITE:PS50805
SMART:SM00349 GO:GO:0005524 GO:GO:0006355 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:CH471220
eggNOG:COG0323 EMBL:AC018720 SUPFAM:SSF109640 HOGENOM:HOG000231475
HOVERGEN:HBG067759 UniGene:Hs.661055 HSSP:P54278 EMBL:U38979
EMBL:CR621744 EMBL:BC029646 EMBL:BC101598 IPI:IPI00022518
IPI:IPI00395560 IPI:IPI00743216 UniGene:Hs.659871
ProteinModelPortal:Q13401 SMR:Q13401 STRING:Q13401 DMDM:74722311
PRIDE:Q13401 UCSC:uc003uzd.1 GeneCards:GC07M075138 HGNC:HGNC:9128
neXtProt:NX_Q13401 InParanoid:Q13401 OrthoDB:EOG483D6N
NextBio:20894 CleanEx:HS_PMS2L3 Genevestigator:Q13401
Uniprot:Q13401
Length = 168
Score = 143 (55.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G V+ +AVKELVENSLDA AT+I++ +KD G+ LI+VSD+G G
Sbjct: 90 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 149
Query: 82 IRYED 86
+ E+
Sbjct: 150 VEEEN 154
>CGD|CAL0003904 [details] [associations]
symbol:orf19.7257 species:5476 "Candida albicans" [GO:0032390
"MutLbeta complex" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
CGD:CAL0003904 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 eggNOG:COG0323 EMBL:AACQ01000092
PANTHER:PTHR10073 KO:K08739 RefSeq:XP_715055.1
ProteinModelPortal:Q59ZT5 STRING:Q59ZT5 GeneID:3643294
KEGG:cal:CaO19.7257 Uniprot:Q59ZT5
Length = 636
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 123/555 (22%), Positives = 240/555 (43%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I RL+ESV+ +I + + S V+EL++NSLDA A I + + L + + D+G G
Sbjct: 27 ILRLDESVITQIRSHTIFHSLDSVVRELLQNSLDAGANEITIKIDLSSLS-VYIHDNGTG 85
Query: 82 IRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYR 141
I +DL + +H TSK + ++GEAL ++ + ++T+ + + ++
Sbjct: 86 ITPDDLEKVTLQHYTSKWHSHN---------YKGEALFALKVISNLTIISKAPDYTTPFK 136
Query: 142 VSYRDGVMESEPKA----CAAV--KGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLS 195
++ + +E + +GT ++ N+F N+ RR+ ++ + + K+V+ +
Sbjct: 137 LNNSVAELYNEYSGGYFQIGDINPQGTVVIAANMFRNIPVRREQIRTTP--HAKLVEAI- 193
Query: 196 RMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVS-VASNLVQLEASEYNDSS 254
++A+ + ++ + R + H T+ +LD I + G S + L ++ +
Sbjct: 194 KVAVLES-LTPNARVNLKIFLVNH---TTLQLDQIVAICGHSPLLFQLFGVKTKFEPVRA 249
Query: 255 SFV-FKMDGYVSNSNYVAKKTTMVLFVNDRLVECA--PLKRAVEIVYAATF-------PK 304
F K+ G + AK +FVNDR V + KR ++ ++ F
Sbjct: 250 KFKNIKVVGVIGREPITAKH--QYVFVNDRRVTLSLGESKRLNDLFSSSGFNDIDFRTKT 307
Query: 305 ASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQ 364
KPF Y P + V+P KREV Q+ I + K+ R +
Sbjct: 308 TGKPF-YKH----PTFM-FRVYPGKREVV---QDSYTWNIVLRIIYKIIAKFLDRRQPPK 358
Query: 365 TVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHA------YVQSKPH 418
+ S+P P + + D ++ + +KL + N++ + P A + PH
Sbjct: 359 PLLSTP--PIHRTSDKYILTTKTKLGFLKENEIDGLVDNRPYHGKEAPLPRIPTIAHLPH 416
Query: 419 --TSVASGPNLSAVRSSVRQR--RNLNETADLTSIQELIDD----VDRNCHSGLLDIVRH 470
TS + P+L++ ++++ R +N+ D I DD +D++ + + ++
Sbjct: 417 QCTSTHTTPHLTSSQTNLAPEKFRVINQV-DRKFILLAADDQLVVLDQHASDERIRVEQY 475
Query: 471 CS-FIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAP--LSE 527
F+ + L H +A V S+ +++ F F +D A ++
Sbjct: 476 LQEFVSQPNPGLRL-----HSPIAFGVHASELMLFDQYAANFNSFGICYTTDTAQVVITH 530
Query: 528 L-LMLALKEEDLDVE 541
L L+L K ED D E
Sbjct: 531 LPLILLTKVED-DAE 544
>UNIPROTKB|G3V384 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 Pfam:PF02518 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 EMBL:AL049780 GO:GO:0007140
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007130
GO:GO:0007144 GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762
PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V384 SMR:G3V384 Ensembl:ENST00000557648
ArrayExpress:G3V384 Bgee:G3V384 Uniprot:G3V384
Length = 106
Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L V ++ +G I V+EL NS+DA+A + V V + +QV D+G G+
Sbjct: 5 LSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGFGMGS 63
Query: 85 EDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASM 121
+D+ + R+ TSK +DL++ + GFRGEALA++
Sbjct: 64 DDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANI 100
>UNIPROTKB|E9PF25 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
GO:GO:0030983 EMBL:AC006583 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
IPI:IPI00783152 ProteinModelPortal:E9PF25 SMR:E9PF25
Ensembl:ENST00000432299 ArrayExpress:E9PF25 Bgee:E9PF25
Uniprot:E9PF25
Length = 48
Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVEN 52
I RL+E+VVNRIAAGEVIQRP +A+KE++EN
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIEN 38
>UNIPROTKB|F2Z298 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
GO:GO:0005524 GO:GO:0008630 GO:GO:0042493 GO:GO:0009636
GO:GO:0001666 GO:GO:0048477 GO:GO:0007283 GO:GO:0006298
GO:GO:0001673 Gene3D:3.30.565.10 GO:GO:0045190 GO:GO:0071407
GO:GO:0006303 GO:GO:0045950 GO:GO:0000289 GO:GO:0000239
GO:GO:0000712 GO:GO:0000795 GO:GO:0016446 EMBL:AC006583
GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
IPI:IPI00795011 SMR:F2Z298 Ensembl:ENST00000442249
Ensembl:ENST00000454028 Ensembl:ENST00000457004 Uniprot:F2Z298
Length = 38
Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVEN 52
I RL+E+VVNRIAAGEVIQRP +A+KE++EN
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIEN 38
>UNIPROTKB|Q13670 [details] [associations]
symbol:PMS2P11 "Putative postmeiotic segregation increased
2-like protein 11" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 GO:GO:0005524 GO:GO:0016887 GO:GO:0016301
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:NOG84763 GO:GO:0032389 PANTHER:PTHR10073 HSSP:P54278
EMBL:U38980 IPI:IPI00014453 UniGene:Hs.675888
ProteinModelPortal:Q13670 SMR:Q13670 STRING:Q13670
PhosphoSite:Q13670 DMDM:74706325 PaxDb:Q13670 PRIDE:Q13670
GeneCards:GC07P076641 HGNC:HGNC:9125 neXtProt:NX_Q13670
Genevestigator:Q13670 Uniprot:Q13670
Length = 270
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 22 IHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHG 81
I ++ V++I +G V+ +AVKELVENSLDA AT+I++ +KD G+ LI+VS +G G
Sbjct: 161 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGMDLIEVSGNGCG 220
Query: 82 IRYED 86
+ E+
Sbjct: 221 VEEEN 225
>UNIPROTKB|H0Y5L7 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR014721 EMBL:AC006583
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 EMBL:AC011816
HGNC:HGNC:7127 ChiTaRS:Mlh1 Ensembl:ENST00000447829 Uniprot:H0Y5L7
Length = 58
Score = 116 (45.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 224 SSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVN 281
+S +D+IR+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N
Sbjct: 4 ASTVDNIRSIFGNAVSRELIEIGCED----KTLAFKMNGYISNANYSVKKCIFLLFIN 57
>UNIPROTKB|F1LVM7 [details] [associations]
symbol:F1LVM7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 PANTHER:PTHR10073 IPI:IPI00565002
Ensembl:ENSRNOT00000051358 Uniprot:F1LVM7
Length = 154
Score = 115 (45.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 66 KDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVG 125
K+ G +++ D+G GI D+P+ ++T K++ +EDL+++ + GF GEAL S+
Sbjct: 1 KNYGFDKMEIQDNGEGIEAVDVPVTALKYTL-KINSHEDLKNLTTCGFPGEALGSICNAA 59
Query: 126 HVTVT 130
V VT
Sbjct: 60 EVVVT 64
>UNIPROTKB|A8JCH7 [details] [associations]
symbol:CHLREDRAFT_106832 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 EMBL:DS496157 RefSeq:XP_001700137.1
EnsemblPlants:EDO98431 GeneID:5725681 KEGG:cre:CHLREDRAFT_106832
eggNOG:NOG304406 ProtClustDB:CLSN2703724 Uniprot:A8JCH7
Length = 86
Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 25 LEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRY 84
L + +V++I G + AV EL+ NSLDA+A ++ + + L V DDG GI
Sbjct: 8 LPKPLVDKIRTGVTLNTVPQAVVELLCNSLDAEARTVLIKLNAATLSFT-VEDDGCGICS 66
Query: 85 EDLPILCERHTTSKLSKYED 104
EDL ++ R+ TSKL D
Sbjct: 67 EDLELVGTRYYTSKLRSLTD 86
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 677 658 0.00097 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 133
No. of states in DFA: 614 (65 KB)
Total size of DFA: 322 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 67.84u 0.17s 68.01t Elapsed: 00:00:03
Total cpu time: 67.87u 0.17s 68.04t Elapsed: 00:00:03
Start: Fri May 10 05:29:46 2013 End: Fri May 10 05:29:49 2013
WARNINGS ISSUED: 1