Query         005790
Match_columns 677
No_of_seqs    544 out of 3289
Neff          8.5 
Searched_HMMs 46136
Date          Thu Mar 28 13:47:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005790.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005790hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PHA02876 ankyrin repeat protei 100.0 3.4E-49 7.3E-54  459.4  37.6  383   25-466    40-483 (682)
  2 PHA02876 ankyrin repeat protei 100.0 4.5E-45 9.8E-50  424.8  38.4  354   26-454   145-502 (682)
  3 PHA02917 ankyrin-like protein; 100.0 1.7E-44 3.8E-49  410.6  36.8  392   23-467    29-493 (661)
  4 PHA02946 ankyin-like protein;  100.0 2.4E-44 5.2E-49  395.1  34.9  345   28-449    11-378 (446)
  5 PHA02730 ankyrin-like protein; 100.0 3.2E-44 6.8E-49  398.0  34.7  379   23-454    38-526 (672)
  6 PHA02716 CPXV016; CPX019; EVM0 100.0 5.7E-43 1.2E-47  395.3  35.6  371   34-455   150-569 (764)
  7 PHA02946 ankyin-like protein;  100.0 1.4E-42 2.9E-47  381.2  35.8  321   76-465    14-361 (446)
  8 PHA02716 CPXV016; CPX019; EVM0 100.0 1.3E-41 2.7E-46  384.4  33.5  365   25-452   176-593 (764)
  9 PHA02917 ankyrin-like protein; 100.0 1.6E-41 3.5E-46  386.3  33.6  363   21-454    63-514 (661)
 10 PHA02730 ankyrin-like protein; 100.0 4.7E-41   1E-45  372.8  34.6  383   38-467    19-504 (672)
 11 PHA02874 ankyrin repeat protei 100.0 6.7E-41 1.5E-45  369.6  35.8  322   28-419     3-325 (434)
 12 KOG0510 Ankyrin repeat protein 100.0 1.8E-41 3.9E-46  366.2  26.4  362   27-465    32-416 (929)
 13 PHA02874 ankyrin repeat protei 100.0 1.9E-40 4.2E-45  366.0  33.2  315   74-456     4-319 (434)
 14 KOG0510 Ankyrin repeat protein 100.0   4E-41 8.6E-46  363.5  25.0  335   23-422    58-416 (929)
 15 KOG4177 Ankyrin [Cell wall/mem 100.0 1.7E-41 3.6E-46  389.0  21.7  399   26-465   209-650 (1143)
 16 PHA03095 ankyrin-like protein; 100.0 4.4E-40 9.5E-45  367.5  28.8  292   76-413    19-320 (471)
 17 PHA03095 ankyrin-like protein; 100.0 2.3E-39 5.1E-44  361.6  29.1  292  113-456    19-320 (471)
 18 KOG4177 Ankyrin [Cell wall/mem 100.0 1.3E-40 2.7E-45  381.8  17.3  403   29-472   179-619 (1143)
 19 PHA03100 ankyrin repeat protei 100.0 5.6E-39 1.2E-43  359.5  30.3  281   84-410    15-310 (480)
 20 PHA02878 ankyrin repeat protei 100.0 2.5E-38 5.4E-43  353.2  30.2  270   70-425    36-309 (477)
 21 PHA03100 ankyrin repeat protei 100.0 1.3E-37 2.7E-42  348.5  29.2  287   36-377    12-314 (480)
 22 PHA02989 ankyrin repeat protei 100.0 1.2E-36 2.6E-41  340.9  30.4  284   81-407    13-313 (494)
 23 PHA02989 ankyrin repeat protei 100.0 1.5E-36 3.2E-41  340.1  28.7  269  118-427    13-300 (494)
 24 PHA02791 ankyrin-like protein; 100.0 4.3E-36 9.3E-41  308.3  25.5  237  118-454     9-248 (284)
 25 KOG0508 Ankyrin repeat protein 100.0 1.4E-36 3.1E-41  310.0  20.9  195   25-250    41-236 (615)
 26 PHA02875 ankyrin repeat protei 100.0 8.1E-35 1.8E-39  319.5  29.8  242  108-425     2-247 (413)
 27 PHA02878 ankyrin repeat protei 100.0 6.5E-35 1.4E-39  325.8  29.3  272  102-466    31-307 (477)
 28 PHA02792 ankyrin-like protein; 100.0 3.2E-34 6.9E-39  315.1  30.8  394   28-466     5-450 (631)
 29 PHA02798 ankyrin-like protein; 100.0 9.2E-35   2E-39  325.3  26.3  282  121-454    18-319 (489)
 30 PHA02875 ankyrin repeat protei 100.0 6.1E-34 1.3E-38  312.5  27.0  242   26-305     2-247 (413)
 31 PHA02791 ankyrin-like protein; 100.0   1E-33 2.3E-38  290.7  25.8  234   36-329     9-243 (284)
 32 PHA02798 ankyrin-like protein; 100.0 8.9E-34 1.9E-38  317.3  27.1  288   84-414    18-322 (489)
 33 KOG0508 Ankyrin repeat protein 100.0 8.7E-34 1.9E-38  289.7  23.3  219   32-283    10-236 (615)
 34 KOG4412 26S proteasome regulat 100.0 1.9E-33   4E-38  254.3  16.8  178  105-305    35-213 (226)
 35 KOG4412 26S proteasome regulat 100.0 2.2E-33 4.8E-38  253.8  14.5  206  196-423     4-211 (226)
 36 PHA02792 ankyrin-like protein; 100.0 2.1E-31 4.5E-36  293.0  27.4  365   24-453    35-480 (631)
 37 KOG0509 Ankyrin repeat and DHH 100.0 1.5E-30 3.2E-35  277.8  17.5  212  108-389    44-255 (600)
 38 KOG0509 Ankyrin repeat and DHH 100.0 2.8E-30   6E-35  275.7  16.3  208  196-426    45-255 (600)
 39 KOG4369 RTK signaling protein  100.0 6.3E-29 1.4E-33  273.1  10.3  321   27-400   758-1081(2131)
 40 PHA02795 ankyrin-like protein;  99.9 1.2E-26 2.7E-31  247.0  19.2  237  159-454    65-318 (437)
 41 PHA02859 ankyrin repeat protei  99.9 2.2E-26 4.7E-31  227.9  18.8  177  192-426    18-202 (209)
 42 PHA02795 ankyrin-like protein;  99.9 4.9E-26 1.1E-30  242.5  22.3  190   85-305    63-263 (437)
 43 KOG4369 RTK signaling protein   99.9   2E-27 4.4E-32  261.3  11.2  317   66-428   752-1072(2131)
 44 PHA02859 ankyrin repeat protei  99.9 7.1E-26 1.5E-30  224.2  20.4  178  105-306    18-202 (209)
 45 KOG0502 Integral membrane anky  99.9 2.8E-26 6.1E-31  213.6   7.5  238  105-421    59-296 (296)
 46 KOG0502 Integral membrane anky  99.9 1.3E-25 2.9E-30  209.2   9.6  235   26-301    62-296 (296)
 47 KOG0507 CASK-interacting adapt  99.9 1.9E-24 4.1E-29  233.2  16.3  247  111-426     6-264 (854)
 48 TIGR00870 trp transient-recept  99.9 9.2E-24   2E-28  248.2  20.9  255  108-389    17-300 (743)
 49 PLN03192 Voltage-dependent pot  99.9 1.4E-22 3.1E-27  239.6  21.1  191  206-423   505-696 (823)
 50 KOG0507 CASK-interacting adapt  99.9 4.3E-23 9.3E-28  222.8  13.9  252   28-306     5-264 (854)
 51 TIGR00870 trp transient-recept  99.9   1E-22 2.2E-27  239.4  17.9  231   28-285    19-280 (743)
 52 KOG0505 Myosin phosphatase, re  99.9 1.1E-22 2.5E-27  213.1  15.7  215  198-425    43-273 (527)
 53 PLN03192 Voltage-dependent pot  99.9 6.4E-22 1.4E-26  234.1  21.0  174  194-388   524-698 (823)
 54 KOG0514 Ankyrin repeat protein  99.9 5.5E-22 1.2E-26  197.8  12.0  165  100-284   260-429 (452)
 55 KOG0514 Ankyrin repeat protein  99.8 7.1E-21 1.5E-25  189.9  11.1  160  222-399   261-427 (452)
 56 KOG0505 Myosin phosphatase, re  99.8 2.3E-20 4.9E-25  196.0  14.5  230   29-305    43-273 (527)
 57 PHA02743 Viral ankyrin protein  99.8 6.2E-20 1.3E-24  175.0  13.7  140  224-417    15-162 (166)
 58 PHA02743 Viral ankyrin protein  99.8 2.5E-19 5.4E-24  170.8  14.6  148   95-263     7-162 (166)
 59 PHA02884 ankyrin repeat protei  99.8 8.9E-19 1.9E-23  180.2  16.7  159  137-330    27-186 (300)
 60 PHA02741 hypothetical protein;  99.8 1.3E-18 2.8E-23  166.5  13.2  131  224-408    16-157 (169)
 61 KOG0512 Fetal globin-inducing   99.8 3.7E-18 8.1E-23  154.0  13.4  146  197-391    65-210 (228)
 62 PHA02884 ankyrin repeat protei  99.8 4.3E-18 9.4E-23  175.2  14.7  148  196-370    34-186 (300)
 63 PHA02741 hypothetical protein;  99.8 8.3E-18 1.8E-22  161.0  14.2  129  103-285    16-155 (169)
 64 PHA02736 Viral ankyrin protein  99.8 3.3E-18 7.1E-23  161.3  10.2  136  256-410    11-153 (154)
 65 PHA02736 Viral ankyrin protein  99.7 1.7E-17 3.7E-22  156.4  11.1  134  100-255     9-152 (154)
 66 KOG0512 Fetal globin-inducing   99.7 6.9E-17 1.5E-21  145.9  13.7  142  111-273    66-209 (228)
 67 KOG0195 Integrin-linked kinase  99.7 1.1E-17 2.4E-22  162.2   6.4  156  203-413     8-163 (448)
 68 KOG3676 Ca2+-permeable cation   99.7 3.8E-16 8.3E-21  171.9  16.9  240   73-314   103-375 (782)
 69 KOG0195 Integrin-linked kinase  99.7 2.7E-16 5.9E-21  152.5   9.2  159  237-460     8-167 (448)
 70 KOG3676 Ca2+-permeable cation   99.7 1.2E-15 2.7E-20  167.9  15.5  199  100-313    93-325 (782)
 71 PF12796 Ank_2:  Ankyrin repeat  99.6 1.8E-15 3.9E-20  128.4  11.1   89  199-293     1-89  (89)
 72 PF12796 Ank_2:  Ankyrin repeat  99.6 8.3E-15 1.8E-19  124.3  11.2   89  233-376     1-89  (89)
 73 cd00204 ANK ankyrin repeats;    99.6 8.7E-14 1.9E-18  124.7  14.9   85  196-281    41-125 (126)
 74 cd00204 ANK ankyrin repeats;    99.5 9.7E-14 2.1E-18  124.4  14.0  120  193-314     5-124 (126)
 75 KOG4214 Myotrophin and similar  99.5 2.2E-13 4.7E-18  110.6   8.4  105  197-304     4-108 (117)
 76 COG0666 Arp FOG: Ankyrin repea  99.5 2.6E-12 5.6E-17  127.7  17.8  132  134-285    65-203 (235)
 77 COG0666 Arp FOG: Ankyrin repea  99.4 1.8E-12   4E-17  128.8  15.4  132  223-406    67-203 (235)
 78 KOG0515 p53-interacting protei  99.4 2.7E-12 5.8E-17  134.1  10.1  120  198-326   553-672 (752)
 79 KOG4214 Myotrophin and similar  99.4 3.9E-12 8.5E-17  103.4   8.9  103  145-269     5-107 (117)
 80 PF13637 Ank_4:  Ankyrin repeat  99.3   9E-12   2E-16   94.9   6.6   54  229-282     1-54  (54)
 81 PTZ00322 6-phosphofructo-2-kin  99.3 2.1E-11 4.6E-16  140.8  12.6  106  197-304    84-196 (664)
 82 PTZ00322 6-phosphofructo-2-kin  99.2 2.6E-11 5.7E-16  140.0  11.7  107  232-349    85-193 (664)
 83 KOG1710 MYND Zn-finger and ank  99.2 4.9E-11 1.1E-15  116.4  10.7  130  196-327    13-145 (396)
 84 PF13857 Ank_5:  Ankyrin repeat  99.2   1E-11 2.2E-16   95.3   4.8   55  214-269     1-56  (56)
 85 KOG0515 p53-interacting protei  99.2 3.1E-11 6.8E-16  126.2   9.5  119  145-283   552-673 (752)
 86 KOG1710 MYND Zn-finger and ank  99.2 1.4E-10 3.1E-15  113.2  11.0  119  144-282    14-132 (396)
 87 PF13637 Ank_4:  Ankyrin repeat  99.2 5.6E-11 1.2E-15   90.5   6.5   54  195-249     1-54  (54)
 88 PF13857 Ank_5:  Ankyrin repeat  99.2 1.5E-11 3.2E-16   94.4   3.1   50  335-386     7-56  (56)
 89 PF13606 Ank_3:  Ankyrin repeat  98.6   3E-08 6.6E-13   65.2   3.6   29   25-53      1-29  (30)
 90 KOG0783 Uncharacterized conser  98.6 2.7E-08 5.9E-13  109.5   3.6   84  188-271    45-128 (1267)
 91 KOG0818 GTPase-activating prot  98.5 2.7E-07 5.9E-12   96.5   9.5   88  197-284   135-222 (669)
 92 PF13606 Ank_3:  Ankyrin repeat  98.5 1.6E-07 3.6E-12   61.7   4.0   29  228-256     1-29  (30)
 93 KOG0782 Predicted diacylglycer  98.4 8.5E-07 1.9E-11   94.0   9.1   88  196-283   900-988 (1004)
 94 KOG0783 Uncharacterized conser  98.4 2.2E-07 4.8E-12  102.6   4.5   95  210-305    33-128 (1267)
 95 KOG0782 Predicted diacylglycer  98.4 1.3E-06 2.8E-11   92.7   9.4  118  233-403   870-987 (1004)
 96 KOG0506 Glutaminase (contains   98.4   4E-07 8.6E-12   95.0   5.6   87  197-284   508-595 (622)
 97 PF00023 Ank:  Ankyrin repeat H  98.4 5.5E-07 1.2E-11   60.8   4.3   32  228-259     1-32  (33)
 98 PF00023 Ank:  Ankyrin repeat H  98.3 6.1E-07 1.3E-11   60.5   4.0   32  343-376     1-32  (33)
 99 KOG0705 GTPase-activating prot  98.3 1.5E-06 3.2E-11   92.9   8.1   89  198-286   627-718 (749)
100 KOG0818 GTPase-activating prot  98.3 2.2E-06 4.8E-11   89.9   9.0   95  138-251   123-222 (669)
101 KOG0506 Glutaminase (contains   98.2 1.2E-06 2.5E-11   91.6   5.5   90  226-315   503-592 (622)
102 KOG0522 Ankyrin repeat protein  98.2 3.4E-06 7.4E-11   89.8   8.1   89  197-285    22-111 (560)
103 KOG0705 GTPase-activating prot  98.1 4.7E-06   1E-10   89.1   7.7   86  316-408   634-719 (749)
104 KOG0522 Ankyrin repeat protein  98.1 4.4E-06 9.6E-11   89.0   7.2   66  335-402    46-111 (560)
105 KOG3609 Receptor-activated Ca2  98.1 1.2E-05 2.7E-10   90.4   9.9  133   71-221    25-157 (822)
106 KOG3609 Receptor-activated Ca2  97.9   2E-05 4.4E-10   88.7   7.6  132  108-257    25-159 (822)
107 KOG0511 Ankyrin repeat protein  97.9  0.0001 2.3E-09   75.4  11.9   67  198-265    39-105 (516)
108 KOG2384 Major histocompatibili  97.8 4.5E-05 9.9E-10   71.1   7.2   66  219-285     3-69  (223)
109 KOG0511 Ankyrin repeat protein  97.8 4.7E-05   1E-09   77.8   6.8   70  230-300    37-106 (516)
110 KOG0521 Putative GTPase activa  97.7   4E-05 8.7E-10   88.8   5.1   78  228-306   655-732 (785)
111 KOG2384 Major histocompatibili  97.6 0.00022 4.8E-09   66.6   7.7   64  336-401     4-68  (223)
112 KOG0521 Putative GTPase activa  97.6 7.2E-05 1.6E-09   86.7   5.5   79  342-426   654-732 (785)
113 KOG0520 Uncharacterized conser  97.2 0.00034 7.4E-09   80.8   5.3   91  195-287   574-666 (975)
114 KOG0520 Uncharacterized conser  97.1 0.00049 1.1E-08   79.5   4.9  124   25-165   573-702 (975)
115 smart00248 ANK ankyrin repeats  96.5  0.0034 7.5E-08   39.3   3.5   28   26-53      2-29  (30)
116 smart00248 ANK ankyrin repeats  95.9   0.013 2.9E-07   36.4   4.0   26  229-254     2-27  (30)
117 KOG2505 Ankyrin repeat protein  95.1   0.036 7.9E-07   59.3   5.9   73  207-282   403-480 (591)
118 PF03158 DUF249:  Multigene fam  94.9    0.27 5.8E-06   46.4  10.3  144   69-250    44-191 (192)
119 PLN03218 maturation of RBCL 1;  93.8     1.4 2.9E-05   54.2  16.0  189  197-411   584-789 (1060)
120 KOG2505 Ankyrin repeat protein  93.7   0.087 1.9E-06   56.5   4.9   41  108-149   430-470 (591)
121 PF03158 DUF249:  Multigene fam  93.7    0.61 1.3E-05   44.1   9.9  138  110-283    48-191 (192)
122 PF06128 Shigella_OspC:  Shigel  92.2    0.84 1.8E-05   44.4   8.8  123  198-370   156-278 (284)
123 PLN03218 maturation of RBCL 1;  92.2     5.8 0.00013   48.8  18.3  260  110-411   477-754 (1060)
124 PF06128 Shigella_OspC:  Shigel  91.3     1.2 2.5E-05   43.5   8.6  119  111-254   156-279 (284)
125 PLN03077 Protein ECB2; Provisi  90.3      37  0.0008   41.2  22.7   57  110-170   328-388 (857)
126 PF11929 DUF3447:  Domain of un  89.0     1.1 2.4E-05   36.4   5.6   46   28-92      8-53  (76)
127 PLN03081 pentatricopeptide (PP  86.3      41  0.0009   39.6  19.1   90   75-170   130-223 (697)
128 PF11929 DUF3447:  Domain of un  84.2     1.9 4.1E-05   35.0   4.6   48  196-251     7-54  (76)
129 PLN03081 pentatricopeptide (PP  83.6      64  0.0014   38.0  19.1  310   27-408   228-560 (697)
130 PLN03077 Protein ECB2; Provisi  78.1 1.7E+02  0.0037   35.5  22.8   60  108-171   124-187 (857)
131 cd07920 Pumilio Pumilio-family  63.2 1.9E+02  0.0041   30.2  14.5  114  192-308   126-249 (322)
132 PF04053 Coatomer_WDAD:  Coatom  50.8      56  0.0012   36.2   8.1  105  110-251   323-428 (443)
133 PF01671 ASFV_360:  African swi  36.2 1.2E+02  0.0027   29.4   6.8  123  114-281    91-214 (215)
134 KOG0292 Vesicle coat complex C  34.4   2E+02  0.0043   34.3   9.1  174   30-251   600-778 (1202)
135 KOG3614 Ca2+/Mg2+-permeable ca  29.7 4.6E+02    0.01   32.9  11.5   26   28-53    427-452 (1381)
136 KOG4032 Uncharacterized conser  20.6 3.4E+02  0.0075   25.9   6.6   21  112-132    97-117 (184)

No 1  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.4e-49  Score=459.37  Aligned_cols=383  Identities=19%  Similarity=0.174  Sum_probs=316.1

Q ss_pred             ccCcHHHHHHHcCCHHHHHHHHHhcCCchhhhh-----hHHhhhhc----------------------------------
Q 005790           25 WYASPIDWAAANGHYDLVRELLRIDGNHLIKLT-----SLRRIRRL----------------------------------   65 (677)
Q Consensus        25 ~g~TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~-----~~~~~~~l----------------------------------   65 (677)
                      ++.||||+||..||.|+|++||+.+++......     +++-....                                  
T Consensus        40 ~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  119 (682)
T PHA02876         40 IPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDE  119 (682)
T ss_pred             ccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHH
Confidence            466999999999999999999999887432111     11100000                                  


Q ss_pred             --------------------cccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHH
Q 005790           66 --------------------ETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVK  125 (677)
Q Consensus        66 --------------------~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk  125 (677)
                                          .......++++.++..++..++++|++    .|++++.+|..|.||||+||..|+.++|+
T Consensus       120 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~----~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~  195 (682)
T PHA02876        120 ACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLE----GGADVNAKDIYCITPIHYAAERGNAKMVN  195 (682)
T ss_pred             HHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHh----CCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence                                000011234556667788888899988    99999999999999999999999999999


Q ss_pred             HHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhc
Q 005790          126 QLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARG  205 (677)
Q Consensus       126 ~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~  205 (677)
                      +|+++|+ +++..+..|.||||+| +..++.+++++|++.+.+++.                       +.++|+.|+..
T Consensus       196 ~LL~~Ga-d~n~~~~~g~t~L~~A-~~~~~~~ivk~Ll~~~~~~~~-----------------------~~~~L~~ai~~  250 (682)
T PHA02876        196 LLLSYGA-DVNIIALDDLSVLECA-VDSKNIDTIKAIIDNRSNINK-----------------------NDLSLLKAIRN  250 (682)
T ss_pred             HHHHCCC-CcCccCCCCCCHHHHH-HHcCCHHHHHHHHhcCCCCCC-----------------------CcHHHHHHHHc
Confidence            9999997 4566778899999988 477999999999998776542                       13689999999


Q ss_pred             CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCH-HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHH
Q 005790          206 GNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQV-EVVKDLIASFDIINSTDHQGNTPLHIAAYRG-QPAVVEALIL  283 (677)
Q Consensus       206 g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~-eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g-~~~iv~~LL~  283 (677)
                      ++.+++++|++.|+++ +..+..|.||||+|+..++. +++++|++.|++++..|..|.||||+|+..| +.+++++|+.
T Consensus       251 ~~~~~~~~Ll~~g~~v-n~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~  329 (682)
T PHA02876        251 EDLETSLLLYDAGFSV-NSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIM  329 (682)
T ss_pred             CCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHH
Confidence            9999999999999998 67888999999999999986 6899999999999999999999999999999 5899999999


Q ss_pred             hCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHH
Q 005790          284 ASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQL  363 (677)
Q Consensus       284 ~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~l  363 (677)
                      .| ++++..+..|.||||+|+..         .+..+++.+|++.+     +++|.+|..|.||||+|+..+ +.+++++
T Consensus       330 ~g-adin~~d~~g~TpLh~A~~~---------~~~~~iv~lLl~~g-----adin~~d~~G~TpLh~Aa~~~-~~~iv~~  393 (682)
T PHA02876        330 LG-ADVNAADRLYITPLHQASTL---------DRNKDIVITLLELG-----ANVNARDYCDKTPIHYAAVRN-NVVIINT  393 (682)
T ss_pred             cC-CCCCCcccCCCcHHHHHHHh---------CCcHHHHHHHHHcC-----CCCccCCCCCCCHHHHHHHcC-CHHHHHH
Confidence            88 67899999999999999874         23456677776655     568999999999999999988 9999999


Q ss_pred             HhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHH
Q 005790          364 LMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTE  443 (677)
Q Consensus       364 LL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~  443 (677)
                      |++ .|++++..+..|.||||+|+..++..   .++++|++.|+++|.+|..|+||||+|+....         ..++++
T Consensus       394 Ll~-~gad~~~~~~~g~T~Lh~A~~~~~~~---~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~---------~~~iv~  460 (682)
T PHA02876        394 LLD-YGADIEALSQKIGTALHFALCGTNPY---MSVKTLIDRGANVNSKNKDLSTPLHYACKKNC---------KLDVIE  460 (682)
T ss_pred             HHH-CCCCccccCCCCCchHHHHHHcCCHH---HHHHHHHhCCCCCCcCCCCCChHHHHHHHhCC---------cHHHHH
Confidence            999 89999999999999999998877643   36889999999999999999999999987432         267999


Q ss_pred             HHHHcCCCCCCCCCCCCCCCCCC
Q 005790          444 IFLYTGIDVSSDGNANSGSGGMS  466 (677)
Q Consensus       444 ~LL~~Gad~~~~~~~g~t~~~~~  466 (677)
                      +|+++|||++..+..|.|+....
T Consensus       461 lLl~~Gad~n~~d~~g~tpl~~a  483 (682)
T PHA02876        461 MLLDNGADVNAINIQNQYPLLIA  483 (682)
T ss_pred             HHHHCCCCCCCCCCCCCCHHHHH
Confidence            99999999999999998876544


No 2  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.5e-45  Score=424.76  Aligned_cols=354  Identities=21%  Similarity=0.221  Sum_probs=316.0

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhc
Q 005790           26 YASPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRA  105 (677)
Q Consensus        26 g~TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d  105 (677)
                      ..++|+.|+..|+.+++++|++.|+++|..            ...+.||||.|+..|+.+++++|++    .|++++..+
T Consensus       145 ~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~------------d~~G~TpLh~Aa~~G~~~iv~~LL~----~Gad~n~~~  208 (682)
T PHA02876        145 YMKLIKERIQQDELLIAEMLLEGGADVNAK------------DIYCITPIHYAAERGNAKMVNLLLS----YGADVNIIA  208 (682)
T ss_pred             hhHHHHHHHHCCcHHHHHHHHhCCCCCCCC------------CCCCCCHHHHHHHCCCHHHHHHHHH----CCCCcCccC
Confidence            458899999999999999999999999753            5578999999999999999999999    999999999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhc
Q 005790          106 GYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEE  185 (677)
Q Consensus       106 ~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~  185 (677)
                      ..|.||||+|+..|+.+++++|++.++..     ..+.++++.| +..++.+++++|++.|++++..+..          
T Consensus       209 ~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~-----~~~~~~L~~a-i~~~~~~~~~~Ll~~g~~vn~~d~~----------  272 (682)
T PHA02876        209 LDDLSVLECAVDSKNIDTIKAIIDNRSNI-----NKNDLSLLKA-IRNEDLETSLLLYDAGFSVNSIDDC----------  272 (682)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcCCCC-----CCCcHHHHHH-HHcCCHHHHHHHHHCCCCCCCCCCC----------
Confidence            99999999999999999999999988643     2344677776 5889999999999999998866544          


Q ss_pred             chhhhhhhccchHHHHHHhcCCH-HHHHHHHhcCCCccccCCCCCCcHHHHHHHhC-CHHHHHHHHhcCCCCCCCCCCCC
Q 005790          186 IPSVYKWEMMNRAVHAAARGGNL-KILKELLENCTDVLTYRDKQGSTILHAAAGRG-QVEVVKDLIASFDIINSTDHQGN  263 (677)
Q Consensus       186 ~~~~~~~~~~~t~Lh~A~~~g~~-eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g-~~eivk~Ll~~ga~in~~d~~g~  263 (677)
                               |.||||+|+..++. +++++|++.|+++ +..|..|.||||+|+..| +.+++++|+..|++++..|..|.
T Consensus       273 ---------g~TpLh~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~  342 (682)
T PHA02876        273 ---------KNTPLHHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYI  342 (682)
T ss_pred             ---------CCCHHHHHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCC
Confidence                     47999999999996 6999999999998 789999999999999999 59999999999999999999999


Q ss_pred             cHHHHHHHc-CCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCC
Q 005790          264 TPLHIAAYR-GQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNN  342 (677)
Q Consensus       264 tpL~~A~~~-g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~  342 (677)
                      ||||+|+.. ++.+++++|++.| ++++.+|..|.||||+|+.          .++.+++++|++.+     ++++..+.
T Consensus       343 TpLh~A~~~~~~~~iv~lLl~~g-adin~~d~~G~TpLh~Aa~----------~~~~~iv~~Ll~~g-----ad~~~~~~  406 (682)
T PHA02876        343 TPLHQASTLDRNKDIVITLLELG-ANVNARDYCDKTPIHYAAV----------RNNVVIINTLLDYG-----ADIEALSQ  406 (682)
T ss_pred             cHHHHHHHhCCcHHHHHHHHHcC-CCCccCCCCCCCHHHHHHH----------cCCHHHHHHHHHCC-----CCccccCC
Confidence            999999985 4788999999988 7899999999999999999          45567777777655     56888999


Q ss_pred             CCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCC-CCchHHHHHHHHHHcCCCCCCCcccCCchHH
Q 005790          343 DGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRP-QSASSDILIRHLISAGGIFGCQDYSARRAIA  421 (677)
Q Consensus       343 ~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~-~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~  421 (677)
                      .|.||||+|+..+....++++|++ .|+++|.+|..|+||||+|+..+ +.+    ++++|+++|+++|.+|..|.|||+
T Consensus       407 ~g~T~Lh~A~~~~~~~~~vk~Ll~-~gadin~~d~~G~TpLh~Aa~~~~~~~----iv~lLl~~Gad~n~~d~~g~tpl~  481 (682)
T PHA02876        407 KIGTALHFALCGTNPYMSVKTLID-RGANVNSKNKDLSTPLHYACKKNCKLD----VIEMLLDNGADVNAINIQNQYPLL  481 (682)
T ss_pred             CCCchHHHHHHcCCHHHHHHHHHh-CCCCCCcCCCCCChHHHHHHHhCCcHH----HHHHHHHCCCCCCCCCCCCCCHHH
Confidence            999999999987756788999999 99999999999999999999877 444    799999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCccchhhHHHHHHcCCCCCC
Q 005790          422 SHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSS  454 (677)
Q Consensus       422 ~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~  454 (677)
                      .|+..            .+++++|+..|++...
T Consensus       482 ~a~~~------------~~~v~~Ll~~~a~~~~  502 (682)
T PHA02876        482 IALEY------------HGIVNILLHYGAELRD  502 (682)
T ss_pred             HHHHh------------CCHHHHHHHCCCCCCc
Confidence            99863            2379999999998863


No 3  
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.7e-44  Score=410.64  Aligned_cols=392  Identities=13%  Similarity=0.046  Sum_probs=300.4

Q ss_pred             ccccCcHHHHHHHc---CCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHH----HHHHHhhhh
Q 005790           23 QWWYASPIDWAAAN---GHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVA----RKLFLECKS   95 (677)
Q Consensus        23 ~~~g~TpL~~Aa~~---G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v----~~lLl~~~~   95 (677)
                      +..|+||||+||..   |+.++|++||+.|++++.            ....+.||||+|+..++.++    +++|++   
T Consensus        29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~------------~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~---   93 (661)
T PHA02917         29 NQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLH------------KNWRQLTPLEEYTNSRHVKVNKDIAMALLE---   93 (661)
T ss_pred             CCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccc------------cCCCCCCHHHHHHHcCChhHHHHHHHHHHh---
Confidence            45688999998665   889999999999999864            36779999999999888554    456655   


Q ss_pred             cCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHH-HhcCCHHHHHHHHhcCCCcccccc
Q 005790           96 KNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAA-ARSKNCDVFRLIYDFAVSPRFLTA  174 (677)
Q Consensus        96 ~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA-~~~g~~evv~lLl~~Gad~~~~~~  174 (677)
                       .+..++..+  ..+++|+|+..|+.++|++|+++|+ +++..|..|.|||++++ +..|+.+++++|+++|++++..+.
T Consensus        94 -~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Ga-din~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~  169 (661)
T PHA02917         94 -ATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGF-DLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE  169 (661)
T ss_pred             -ccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCC-CCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc
Confidence             443344433  2377889999999999999999997 67788999999999654 467999999999999999986553


Q ss_pred             cCCcchhhhhcchhhhhhhccchHHHHHHh-----------cCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCH-
Q 005790          175 KGGELEEHIEEIPSVYKWEMMNRAVHAAAR-----------GGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQV-  242 (677)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~-----------~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~-  242 (677)
                      .+..     ......+....+.||||+|+.           .++.++|++|+++|+++ +..|..|.||||+|+.+|+. 
T Consensus       170 ~~~~-----g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadv-n~~d~~G~TpLh~A~~~g~~~  243 (661)
T PHA02917        170 DDEY-----GYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKP-SSIDKNYCTALQYYIKSSHID  243 (661)
T ss_pred             cccc-----ccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCc-ccCCCCCCcHHHHHHHcCCCc
Confidence            3211     000012233456799999986           46899999999999999 88999999999999999985 


Q ss_pred             -HHHHHHHhcCCCCC----CCCCCCCcHHHHHHHc---------CCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCc
Q 005790          243 -EVVKDLIASFDIIN----STDHQGNTPLHIAAYR---------GQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQ  308 (677)
Q Consensus       243 -eivk~Ll~~ga~in----~~d~~g~tpL~~A~~~---------g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~  308 (677)
                       ++|++|++ |++++    ..|..|.+|+|+|++-         .+.+++++||+.|+.       .+.++||+++..+.
T Consensus       244 ~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~-------~~~~~~~~~~~~~~  315 (661)
T PHA02917        244 IDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP-------HGIMCSIVPLWRND  315 (661)
T ss_pred             HHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC-------CceeEeeecccccc
Confidence             79999985 88775    3566788999999952         178999999999942       23344444444443


Q ss_pred             hHHHHHhh--------------------HHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCC
Q 005790          309 TYAFRRLD--------------------RQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAP  368 (677)
Q Consensus       309 ~~~~~~L~--------------------~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~  368 (677)
                      .+.+..+.                    ...+++++|++.|     +++|.++..|.|+.    ... ..+++++||...
T Consensus       316 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~G-----Advn~~~~~g~~~~----~~~-~~~~i~~LL~~~  385 (661)
T PHA02917        316 KETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYG-----AVVNKEAIHGYFRN----INI-DSYTMKYLLKKE  385 (661)
T ss_pred             hHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcC-----CCCCCCCccccchh----hcC-CHHHHHHHHHhc
Confidence            33222111                    1356889997776     66888889998865    234 778888888756


Q ss_pred             CCCccccCCCCCcHHHHHhhCCC--------------Cch-----HHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCC
Q 005790          369 SINVNVRDNDGMTTLDLLKQRPQ--------------SAS-----SDILIRHLISAGGIFGCQDYSARRAIASHIKMLGN  429 (677)
Q Consensus       369 Gadin~~d~~G~TpL~~A~~~~~--------------~~~-----~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~  429 (677)
                      |++++..+.+|+||||.|++.+.              .++     ...++++|+++|||+|.+|..|+||||+|+.... 
T Consensus       386 ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~-  464 (661)
T PHA02917        386 GGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNK-  464 (661)
T ss_pred             CCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCC-
Confidence            88888888889999999875433              222     2457899999999999999999999999986422 


Q ss_pred             CCCCCCccchhhHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 005790          430 GSSPGTSFRISDTEIFLYTGIDVSSDGNANSGSGGMSS  467 (677)
Q Consensus       430 ~~~~~~~~~~~~v~~LL~~Gad~~~~~~~g~t~~~~~~  467 (677)
                               .+++++|+++|||++..+..|.|+.....
T Consensus       465 ---------~~~v~~Ll~~GAdin~~d~~G~T~L~~A~  493 (661)
T PHA02917        465 ---------QSLVSLLLESGSDVNIRSNNGYTCIAIAI  493 (661)
T ss_pred             ---------HHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence                     77999999999999999999988766553


No 4  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=2.4e-44  Score=395.08  Aligned_cols=345  Identities=14%  Similarity=0.152  Sum_probs=255.2

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHH--hhchHHHHHHHHhhhhcCCCCchhhc
Q 005790           28 SPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVA--KCRSKVARKLFLECKSKNGKNSLIRA  105 (677)
Q Consensus        28 TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~--~~~~~~v~~lLl~~~~~~g~~~~~~d  105 (677)
                      -+|+.++..|+.+.++.+++....                 ....++||.++  ...+.+++++|++    .|++++.+|
T Consensus        11 ~sl~~~~~~~n~~~~~~~l~~~~~-----------------~g~~~~Lh~~~~~~~~~~~iv~~Ll~----~Gadvn~~d   69 (446)
T PHA02946         11 LSLYAKYNSKNLDVFRNMLQAIEP-----------------SGNYHILHAYCGIKGLDERFVEELLH----RGYSPNETD   69 (446)
T ss_pred             HHHHHHHccCcHHHHHHHHhccCC-----------------CCCChHHHHHHHhcCCCHHHHHHHHH----CcCCCCccC
Confidence            567778888888888888864211                 12356666654  3445677888887    788888888


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhc-CCHHHHHHHHhcCCCcccccccCCcchhhhh
Q 005790          106 GYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARS-KNCDVFRLIYDFAVSPRFLTAKGGELEEHIE  184 (677)
Q Consensus       106 ~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~-g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~  184 (677)
                      ..|.||||+|+..|+.++|++|+++|+ +++..|..|.||||+|+... +..+++++|+++|++++.....         
T Consensus        70 ~~G~TpLh~Aa~~g~~eiv~lLL~~GA-din~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~---------  139 (446)
T PHA02946         70 DDGNYPLHIASKINNNRIVAMLLTHGA-DPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDE---------  139 (446)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCcC-CCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCC---------
Confidence            888888888888888888888888876 45667888888888875432 2478888888888887743211         


Q ss_pred             cchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCC--HHHHHHHHhcCCCCCCCCCCC
Q 005790          185 EIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQ--VEVVKDLIASFDIINSTDHQG  262 (677)
Q Consensus       185 ~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~--~eivk~Ll~~ga~in~~d~~g  262 (677)
                               .|.|||| |+..|+.+++++|++.|+++ +..|..|+||||+|+..++  .+++++|+++|++++..|..|
T Consensus       140 ---------~g~tpL~-aa~~~~~~vv~~Ll~~gad~-~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G  208 (446)
T PHA02946        140 ---------EGCGPLL-ACTDPSERVFKKIMSIGFEA-RIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDG  208 (446)
T ss_pred             ---------CCCcHHH-HHHCCChHHHHHHHhccccc-cccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCC
Confidence                     1357886 55567888888888888887 7778888888888776544  578888888888888888888


Q ss_pred             CcHHHHHHHcC--CHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHccccc---------
Q 005790          263 NTPLHIAAYRG--QPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIF---------  331 (677)
Q Consensus       263 ~tpL~~A~~~g--~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~---------  331 (677)
                      .||||+|+..+  +.+++++|+. + ++++.+|..|.||||+|+..++.         .+++++|++.+..         
T Consensus       209 ~TpLH~Aa~~~~~~~~iv~lLl~-g-adin~~d~~G~TpLh~A~~~~~~---------~~~~~~Ll~~g~~~~~~~~~~a  277 (446)
T PHA02946        209 NTPLHIVCSKTVKNVDIINLLLP-S-TDVNKQNKFGDSPLTLLIKTLSP---------AHLINKLLSTSNVITDQTVNIC  277 (446)
T ss_pred             CCHHHHHHHcCCCcHHHHHHHHc-C-CCCCCCCCCCCCHHHHHHHhCCh---------HHHHHHHHhCCCCCCCcHHHHH
Confidence            88888888775  6778887774 4 67888888888888888875432         2333444443311         


Q ss_pred             ------chhhhhhcc-CCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHH
Q 005790          332 ------NMEDIINAK-NNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLIS  404 (677)
Q Consensus       332 ------~~~~~in~~-d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~  404 (677)
                            +.-..++.. +..|.||||+|+..| +.++|++||+ .|+       .|.||||+|+..++.+    ++++|+.
T Consensus       278 ~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g-~~eivk~Ll~-~~~-------~~~t~L~~A~~~~~~~----~v~~Ll~  344 (446)
T PHA02946        278 IFYDRDDVLEIINDKGKQYDSTDFKMAVEVG-SIRCVKYLLD-NDI-------ICEDAMYYAVLSEYET----MVDYLLF  344 (446)
T ss_pred             HHcCchHHHHHHHHcCcccCCCHHHHHHHcC-CHHHHHHHHH-CCC-------ccccHHHHHHHhCHHH----HHHHHHH
Confidence                  000112222 246889999999988 9999999999 664       5789999999999866    7999999


Q ss_pred             cCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcC
Q 005790          405 AGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTG  449 (677)
Q Consensus       405 ~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~G  449 (677)
                      +|+++|.. ..|.|||++|+....          .++++.||.+.
T Consensus       345 ~ga~~n~~-~~G~t~l~~a~~~~~----------~~~~~~ll~~~  378 (446)
T PHA02946        345 NHFSVDSV-VNGHTCMSECVRLNN----------PVILSKLMLHN  378 (446)
T ss_pred             CCCCCCCc-cccccHHHHHHHcCC----------HHHHHHHHhcC
Confidence            99999996 689999999997544          77999999843


No 5  
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.2e-44  Score=398.04  Aligned_cols=379  Identities=15%  Similarity=0.141  Sum_probs=300.0

Q ss_pred             ccccCcHHHHHHHcC---CHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhc--hHHHHHHHHhhhhcC
Q 005790           23 QWWYASPIDWAAANG---HYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCR--SKVARKLFLECKSKN   97 (677)
Q Consensus        23 ~~~g~TpL~~Aa~~G---~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~--~~~v~~lLl~~~~~~   97 (677)
                      ++.|+||||+|+..|   +.++|++||++||+++.            .+..|.||||.|+..+  +.+++++|++    .
T Consensus        38 d~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~------------kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~----~  101 (672)
T PHA02730         38 DRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLC------------RNNEGLTPLGVYSKRKYVKSQIVHLLIS----S  101 (672)
T ss_pred             CCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcc------------cCCCCCChHHHHHHcCCCcHHHHHHHHh----c
Confidence            456899999999997   59999999999999974            4778999999998866  7999999999    7


Q ss_pred             CC--CchhhcCCCChHHHHHHH--cCCHHHHHHHHHcCCCccccCC-----CCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 005790           98 GK--NSLIRAGYGGWLLYTAAS--AGDLGFVKQLLDKNPLLVFGEG-----EYGVTDIFYAAARSKNCDVFRLIYDFAVS  168 (677)
Q Consensus        98 g~--~~~~~d~~G~t~L~~Aa~--~g~~eivk~LL~~g~~~~~~~~-----~~g~tpL~~AA~~~g~~evv~lLl~~Gad  168 (677)
                      |+  +++..+..+.+|||.++.  .++.++|++|+..+..+++...     ..|.+|++++ ...++.+||++|+++|++
T Consensus       102 ~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~-~~~~~~eIvklLi~~g~~  180 (672)
T PHA02730        102 YSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVT-TPNPRPEVLLWLLKSECY  180 (672)
T ss_pred             CCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHh-cCCCchHHHHHHHHcCCc
Confidence            54  457778778899998888  9999999999975443433331     3789999988 488999999999999999


Q ss_pred             cccccccCCcchhhhhcchhhhhhhccchHHHHHH------hcCCHHHHHHHHhcCCCccccCCCCCCcHHHH--HHHhC
Q 005790          169 PRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAA------RGGNLKILKELLENCTDVLTYRDKQGSTILHA--AAGRG  240 (677)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~------~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~--A~~~g  240 (677)
                      ++-..-.+           ..+......|.||+++      ..++.|++++||++|+++ +.+|..|.||||+  |+..|
T Consensus       181 v~g~~~~~-----------~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadI-N~kd~~G~TpLh~~~~~~~~  248 (672)
T PHA02730        181 STGYVFRS-----------CMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSI-HGRDEGGSLPIQYYWSCSTI  248 (672)
T ss_pred             cccccccc-----------ccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCcc
Confidence            85111000           0012223346666444      456899999999999999 8899999999995  55667


Q ss_pred             CHHHHHHHHh--------------------------------cCCCCCC--------------------CCCCCCc----
Q 005790          241 QVEVVKDLIA--------------------------------SFDIINS--------------------TDHQGNT----  264 (677)
Q Consensus       241 ~~eivk~Ll~--------------------------------~ga~in~--------------------~d~~g~t----  264 (677)
                      +.|+|++|++                                +|+|+..                    .+..|.+    
T Consensus       249 ~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  328 (672)
T PHA02730        249 DIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYII  328 (672)
T ss_pred             cHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHH
Confidence            8999999999                                7888765                    4555654    


Q ss_pred             -----------------HHHHHHHcC---CHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHH
Q 005790          265 -----------------PLHIAAYRG---QPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQ  324 (677)
Q Consensus       265 -----------------pL~~A~~~g---~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~  324 (677)
                                       .||.-...+   +.+++++|+++| ++++.. ..|.||||+|+..+..      .-..+++++
T Consensus       329 ~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~G-AdIN~k-~~G~TpLH~Aa~~nnn------~i~~eIvel  400 (672)
T PHA02730        329 DNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNG-ATMDKT-TDNNYPLHDYFVNNNN------IVDVNVVRF  400 (672)
T ss_pred             HHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCC-CCCCcC-CCCCcHHHHHHHHcCC------cchHHHHHH
Confidence                             677767655   699999999999 778875 7999999999874210      012799999


Q ss_pred             HHcccccchhhhhhccCCCCchHHHH---HHhCCC--------cHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCc
Q 005790          325 LASGQIFNMEDIINAKNNDGRTALHM---AITGNV--------HLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSA  393 (677)
Q Consensus       325 Ll~~~~~~~~~~in~~d~~G~TpLh~---A~~~~~--------~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~  393 (677)
                      |+++|.   ..++|.+|..|.||||.   |...+.        ..+++++|++ +|+|+|.+|..|.||||+|+..++.+
T Consensus       401 LIs~Ga---~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs-~GADINakD~~G~TPLh~Aa~~~~~e  476 (672)
T PHA02730        401 IVENNG---HMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSK-YMDDIDMIDNENKTLLYYAVDVNNIQ  476 (672)
T ss_pred             HHHcCC---CccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHh-cccchhccCCCCCCHHHHHHHhCCHH
Confidence            998762   12488899999999994   332221        2357999999 99999999999999999999999876


Q ss_pred             hHHHHHHHHHHcCCCCCCCcc-cCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCC
Q 005790          394 SSDILIRHLISAGGIFGCQDY-SARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSS  454 (677)
Q Consensus       394 ~~~~lv~~Ll~~Gadin~~d~-~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~  454 (677)
                          ++++|+++||++|..|. .|.||||.|.....        ...+++++||++|+++..
T Consensus       477 ----ive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~--------~~~eIv~~LLs~ga~i~~  526 (672)
T PHA02730        477 ----FARRLLEYGASVNTTSRSIINTAIQKSSYRRE--------NKTKLVDLLLSYHPTLET  526 (672)
T ss_pred             ----HHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhc--------CcHHHHHHHHHcCCCHHH
Confidence                79999999999999997 59999999876321        127799999999999863


No 6  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=5.7e-43  Score=395.31  Aligned_cols=371  Identities=16%  Similarity=0.095  Sum_probs=288.1

Q ss_pred             HHcCCHHHHHHHHHhc-CCchhhhhhHHhhhhccccccccccHHHHHhh--chHHHHHHHHhhhhcCCCCchhhcCCCCh
Q 005790           34 AANGHYDLVRELLRID-GNHLIKLTSLRRIRRLETVWDDEEQFDDVAKC--RSKVARKLFLECKSKNGKNSLIRAGYGGW  110 (677)
Q Consensus        34 a~~G~~diV~~LL~~g-a~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~--~~~~v~~lLl~~~~~~g~~~~~~d~~G~t  110 (677)
                      .+.++.++|++|+++| +++|..           ....+.+|||+|+..  ++.+++++|++    .|++++.+|..|.|
T Consensus       150 ~~~v~leiVk~LLe~G~ADIN~~-----------~d~~G~TpLH~A~~n~~~~~eIVklLLe----~GADVN~kD~~G~T  214 (764)
T PHA02716        150 TRGIDLDLIKYMVDVGIVNLNYV-----------CKKTGYGILHAYLGNMYVDIDILEWLCN----NGVNVNLQNNHLIT  214 (764)
T ss_pred             ccCCCHHHHHHHHHCCCCCcccc-----------cCCCCCcHHHHHHHhccCCHHHHHHHHH----cCCCCCCCCCCCCC
Confidence            3569999999999999 998742           145689999988643  46799999999    99999999999999


Q ss_pred             HHHHHHHcCC--HHHHHHHHHcCCCccccCCCCCCCHHHHHHH--hcCCHHHHHHHHhcCCCcccccccCCcchhhhhcc
Q 005790          111 LLYTAASAGD--LGFVKQLLDKNPLLVFGEGEYGVTDIFYAAA--RSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEI  186 (677)
Q Consensus       111 ~L~~Aa~~g~--~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~--~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~  186 (677)
                      |||+|+..|+  .++|++|+++|+ +++..+..|.||||+|+.  ..++.+++++|++.+...... .            
T Consensus       215 PLH~Aa~~g~~~~eIVklLLe~GA-DVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~-~------------  280 (764)
T PHA02716        215 PLHTYLITGNVCASVIKKIIELGG-DMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK-N------------  280 (764)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc-c------------
Confidence            9999999995  599999999998 677889999999999853  568999999999865321110 0            


Q ss_pred             hhhhhhhccchHH---HHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHH--hCCHHHHHHHHhcCCCCCCCCCC
Q 005790          187 PSVYKWEMMNRAV---HAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAG--RGQVEVVKDLIASFDIINSTDHQ  261 (677)
Q Consensus       187 ~~~~~~~~~~t~L---h~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~--~g~~eivk~Ll~~ga~in~~d~~  261 (677)
                              ...++   ..|+..|+.+++++|+++|+++ +.+|..|+||||+|+.  .++.+++++|+++|++++.+|..
T Consensus       281 --------~~~~L~~~i~AA~~g~leiVklLLe~GAdI-N~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~  351 (764)
T PHA02716        281 --------IPMILHSYITLARNIDISVVYSFLQPGVKL-HYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNI  351 (764)
T ss_pred             --------chhhhHHHHHHHHcCCHHHHHHHHhCCCce-eccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCC
Confidence                    01233   4588999999999999999998 7899999999999875  46899999999999999999999


Q ss_pred             CCcHHHHHHH--------------cCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHc
Q 005790          262 GNTPLHIAAY--------------RGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLAS  327 (677)
Q Consensus       262 g~tpL~~A~~--------------~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~  327 (677)
                      |+||||+|+.              .++.+++++|+++| ++++.++..|.||||.++....      -....+++++|++
T Consensus       352 G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G-ADIn~kn~~G~TPLh~y~~~a~------n~~~~dIvklLis  424 (764)
T PHA02716        352 GNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG-ADITAVNCLGYTPLTSYICTAQ------NYMYYDIIDCLIS  424 (764)
T ss_pred             CCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC-CCCCCcCCCCCChHHHHHHHHH------hcChHHHHHHHHh
Confidence            9999999875              36899999999999 7899999999999994332100      0245778888877


Q ss_pred             ccccch------hhhhhccCCCCchHHHHHHhCCC----------------cHHHHHHHhhCCCCCccccCCCCCcHHHH
Q 005790          328 GQIFNM------EDIINAKNNDGRTALHMAITGNV----------------HLELVQLLMSAPSINVNVRDNDGMTTLDL  385 (677)
Q Consensus       328 ~~~~~~------~~~in~~d~~G~TpLh~A~~~~~----------------~~eiv~lLL~~~Gadin~~d~~G~TpL~~  385 (677)
                      .+....      +..++..+..+....|.+...+.                ..+++.+++. .++++|..|..|+||||+
T Consensus       425 ~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii-~~~nvN~~D~~G~TPLh~  503 (764)
T PHA02716        425 DKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAII-ERYNNAVCETSGMTPLHV  503 (764)
T ss_pred             CcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHH-hhccccccCCCCCCHHHH
Confidence            652211      11122233333334444433220                1234445555 678899999999999999


Q ss_pred             HhhCCCCchH-HHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCCC
Q 005790          386 LKQRPQSASS-DILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSD  455 (677)
Q Consensus       386 A~~~~~~~~~-~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~  455 (677)
                      |+..++.+.+ .+++++|++.|+|+|.+|..|+||||+|+.......     ...+++++||++|++++..
T Consensus       504 Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~-----~~~eIvk~LL~~ga~~~~~  569 (764)
T PHA02716        504 SIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSG-----HQWYIVKNILDKRPNVDIV  569 (764)
T ss_pred             HHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccc-----cHHHHHHHHHhcCCCcchH
Confidence            9999887643 346799999999999999999999999998543110     1258999999999999875


No 7  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=1.4e-42  Score=381.24  Aligned_cols=321  Identities=14%  Similarity=0.111  Sum_probs=265.7

Q ss_pred             HHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHH--cCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhc
Q 005790           76 DDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAAS--AGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARS  153 (677)
Q Consensus        76 ~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~--~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~  153 (677)
                      ..+...++.+.++.+++....         ..+.++||.++.  .++.++|++|+++|+ +++..|..|.||||+|| ..
T Consensus        14 ~~~~~~~n~~~~~~~l~~~~~---------~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Ga-dvn~~d~~G~TpLh~Aa-~~   82 (446)
T PHA02946         14 YAKYNSKNLDVFRNMLQAIEP---------SGNYHILHAYCGIKGLDERFVEELLHRGY-SPNETDDDGNYPLHIAS-KI   82 (446)
T ss_pred             HHHHccCcHHHHHHHHhccCC---------CCCChHHHHHHHhcCCCHHHHHHHHHCcC-CCCccCCCCCCHHHHHH-Hc
Confidence            345556666777777652211         124689998764  457899999999997 57788999999999995 77


Q ss_pred             CCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCC--HHHHHHHHhcCCCccccCCCCCCc
Q 005790          154 KNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGN--LKILKELLENCTDVLTYRDKQGST  231 (677)
Q Consensus       154 g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~--~eivk~LL~~ga~~~~~~d~~g~T  231 (677)
                      |+.+++++|+++|++++..+..+                   .||||+|+..++  .+++++|+++|++++...+..|.|
T Consensus        83 g~~eiv~lLL~~GAdin~~d~~g-------------------~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~t  143 (446)
T PHA02946         83 NNNRIVAMLLTHGADPNACDKQH-------------------KTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCG  143 (446)
T ss_pred             CCHHHHHHHHHCcCCCCCCCCCC-------------------CCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCc
Confidence            99999999999999999887664                   689999988764  899999999999996567999999


Q ss_pred             HHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC--HHHHHHHHHhCCCCccccCCCCCchhhhhhhcCch
Q 005790          232 ILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQ--PAVVEALILASPSMISVKNTSGETFLHSAVSGFQT  309 (677)
Q Consensus       232 pL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~--~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~  309 (677)
                      ||| |+..++.+++++|+++|++++..|..|+||||+|+..++  .+++++|++.| ++++.+|..|.||||+|+..+  
T Consensus       144 pL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~G-adin~~d~~G~TpLH~Aa~~~--  219 (446)
T PHA02946        144 PLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLG-ISPSKPDHDGNTPLHIVCSKT--  219 (446)
T ss_pred             HHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcC--
Confidence            997 667799999999999999999999999999999987654  68999999999 789999999999999999853  


Q ss_pred             HHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCcc----------------
Q 005790          310 YAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVN----------------  373 (677)
Q Consensus       310 ~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin----------------  373 (677)
                            ..+.+++++|+. +     +++|.+|..|.||||+|+..+...+++++|++ .|++++                
T Consensus       220 ------~~~~~iv~lLl~-g-----adin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~-~g~~~~~~~~~~a~~~~~~~~~  286 (446)
T PHA02946        220 ------VKNVDIINLLLP-S-----TDVNKQNKFGDSPLTLLIKTLSPAHLINKLLS-TSNVITDQTVNICIFYDRDDVL  286 (446)
T ss_pred             ------CCcHHHHHHHHc-C-----CCCCCCCCCCCCHHHHHHHhCChHHHHHHHHh-CCCCCCCcHHHHHHHcCchHHH
Confidence                  235677777775 2     45999999999999999998734689999999 787542                


Q ss_pred             ----cc-CCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHc
Q 005790          374 ----VR-DNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYT  448 (677)
Q Consensus       374 ----~~-d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~  448 (677)
                          .. +..|.||||+|+..|+.+    ++++|+++|+       .|+||||+|+....          .+++++|+++
T Consensus       287 e~l~~~g~~~~~TpLh~Aa~~g~~e----ivk~Ll~~~~-------~~~t~L~~A~~~~~----------~~~v~~Ll~~  345 (446)
T PHA02946        287 EIINDKGKQYDSTDFKMAVEVGSIR----CVKYLLDNDI-------ICEDAMYYAVLSEY----------ETMVDYLLFN  345 (446)
T ss_pred             HHHHHcCcccCCCHHHHHHHcCCHH----HHHHHHHCCC-------ccccHHHHHHHhCH----------HHHHHHHHHC
Confidence                11 135789999999999987    6889999885       46899999987533          7899999999


Q ss_pred             CCCCCCCCCCCCCCCCC
Q 005790          449 GIDVSSDGNANSGSGGM  465 (677)
Q Consensus       449 Gad~~~~~~~g~t~~~~  465 (677)
                      ||+++.+ ..|.|+...
T Consensus       346 ga~~n~~-~~G~t~l~~  361 (446)
T PHA02946        346 HFSVDSV-VNGHTCMSE  361 (446)
T ss_pred             CCCCCCc-cccccHHHH
Confidence            9999996 568876543


No 8  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=1.3e-41  Score=384.40  Aligned_cols=365  Identities=15%  Similarity=0.060  Sum_probs=278.9

Q ss_pred             ccCcHHHHHHH--cCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhch--HHHHHHHHhhhhcCCCC
Q 005790           25 WYASPIDWAAA--NGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRS--KVARKLFLECKSKNGKN  100 (677)
Q Consensus        25 ~g~TpL~~Aa~--~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~--~~v~~lLl~~~~~~g~~  100 (677)
                      .|.||||+|+.  .++.++|++|+++|+++|..            ...+.||||.|+..++  .+++++|++    .|++
T Consensus       176 ~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~k------------D~~G~TPLH~Aa~~g~~~~eIVklLLe----~GAD  239 (764)
T PHA02716        176 TGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQ------------NNHLITPLHTYLITGNVCASVIKKIIE----LGGD  239 (764)
T ss_pred             CCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCC------------CCCCCCHHHHHHHcCCCCHHHHHHHHH----cCCC
Confidence            48899999875  46899999999999999753            5679999999999885  589999999    9999


Q ss_pred             chhhcCCCChHHHHHH---HcCCHHHHHHHHHcCCCccccCCCCCCCHHH--HHHHhcCCHHHHHHHHhcCCCccccccc
Q 005790          101 SLIRAGYGGWLLYTAA---SAGDLGFVKQLLDKNPLLVFGEGEYGVTDIF--YAAARSKNCDVFRLIYDFAVSPRFLTAK  175 (677)
Q Consensus       101 ~~~~d~~G~t~L~~Aa---~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~--~AA~~~g~~evv~lLl~~Gad~~~~~~~  175 (677)
                      ++.+|..|.||||+|+   ..++.++++.|++.+.....   ....++++  ..|+..|+.+++++|+++|++++..+..
T Consensus       240 VN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~---~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~  316 (764)
T PHA02716        240 MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV---KNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSA  316 (764)
T ss_pred             CCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc---ccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCC
Confidence            9999999999999986   56899999999987532111   11112232  2346889999999999999998876554


Q ss_pred             CCcchhhhhcchhhhhhhccchHHHHHHh--cCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHH--------------h
Q 005790          176 GGELEEHIEEIPSVYKWEMMNRAVHAAAR--GGNLKILKELLENCTDVLTYRDKQGSTILHAAAG--------------R  239 (677)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~--~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~--------------~  239 (677)
                                         |+||||+|+.  .++.+++++|+++|+++ +.+|..|+||||+|+.              .
T Consensus       317 -------------------G~TPLH~Aaa~~~~~~eIVklLLe~GADI-N~kD~~G~TPLH~A~~~lav~~~ld~~~~~~  376 (764)
T PHA02716        317 -------------------GRTCLHQYILRHNISTDIIKLLHEYGNDL-NEPDNIGNTVLHTYLSMLSVVNILDPETDND  376 (764)
T ss_pred             -------------------CCCHHHHHHHHhCCCchHHHHHHHcCCCC-ccCCCCCCCHHHHHHHhhhhhcccccccccc
Confidence                               4799999874  46899999999999999 7899999999999875              3


Q ss_pred             CCHHHHHHHHhcCCCCCCCCCCCCcHHHH----HHHcCCHHHHHHHHHhCCCCcccc--------CCCCCch--hhhhhh
Q 005790          240 GQVEVVKDLIASFDIINSTDHQGNTPLHI----AAYRGQPAVVEALILASPSMISVK--------NTSGETF--LHSAVS  305 (677)
Q Consensus       240 g~~eivk~Ll~~ga~in~~d~~g~tpL~~----A~~~g~~~iv~~LL~~g~~~~~~~--------~~~g~tp--Lh~A~~  305 (677)
                      ++.+++++|+++|++++.+|..|.||||.    |...++.+++++|++.+.. ....        +..+.+|  +|.++.
T Consensus       377 ~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~-~~~~~~~~q~ll~~~d~~~~~lhh~~a  455 (764)
T PHA02716        377 IRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVL-NMVKHRILQDLLIRVDDTPCIIHHIIA  455 (764)
T ss_pred             ChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcch-hhhhhhhhhhhhhccCcchhhHHHHHH
Confidence            68999999999999999999999999994    2345789999999997732 1111        1223333  455554


Q ss_pred             cCchHHHHHhhH--------HHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcH-----HHHHHHhhCCCCCc
Q 005790          306 GFQTYAFRRLDR--------QVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHL-----ELVQLLMSAPSINV  372 (677)
Q Consensus       306 ~~~~~~~~~L~~--------~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~-----eiv~lLL~~~Gadi  372 (677)
                      .+.......+..        ...+...++..     +.++|..|..|+||||+|+..+ +.     +++++|++ .|+|+
T Consensus       456 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~-----~~nvN~~D~~G~TPLh~Aa~~g-~~~~v~~e~~k~LL~-~GADI  528 (764)
T PHA02716        456 KYNIPTDLYTDEYEPYDSTKIHDVYHCAIIE-----RYNNAVCETSGMTPLHVSIISH-TNANIVMDSFVYLLS-IQYNI  528 (764)
T ss_pred             hcCcchhhhhhhhhhccccccchhhHHHHHh-----hccccccCCCCCCHHHHHHHcC-CccchhHHHHHHHHh-CCCCC
Confidence            433332222211        11222222211     2337888999999999999877 55     56699999 99999


Q ss_pred             cccCCCCCcHHHHHhhCCCCch-HHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCC
Q 005790          373 NVRDNDGMTTLDLLKQRPQSAS-SDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGID  451 (677)
Q Consensus       373 n~~d~~G~TpL~~A~~~~~~~~-~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad  451 (677)
                      |.+|.+|+||||+|+++|+.+. ...++++|+++|++++..      .|+.+....          ..+.+.+|..+|+.
T Consensus       529 N~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~------~l~~~~~~~----------~~~~~~ll~~~~~~  592 (764)
T PHA02716        529 NIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV------IIFLDKCYA----------NGKFPSLLLSEDDI  592 (764)
T ss_pred             cccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH------HHHHHhhhh----------hhHHHHHHHHcchh
Confidence            9999999999999999998733 345899999999999875      455544321          15688888888886


Q ss_pred             C
Q 005790          452 V  452 (677)
Q Consensus       452 ~  452 (677)
                      +
T Consensus       593 ~  593 (764)
T PHA02716        593 I  593 (764)
T ss_pred             H
Confidence            5


No 9  
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.6e-41  Score=386.34  Aligned_cols=363  Identities=15%  Similarity=0.140  Sum_probs=283.9

Q ss_pred             CCccccCcHHHHHHHcCCHH----HHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhc
Q 005790           21 GDQWWYASPIDWAAANGHYD----LVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSK   96 (677)
Q Consensus        21 ~~~~~g~TpL~~Aa~~G~~d----iV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~   96 (677)
                      ..++.|.||||+|+..|+.+    +|+.|++.+..++..              +...++++|+.+++.+++++|++    
T Consensus        63 ~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~--------------~~~~~~~~a~~~~~~e~vk~Ll~----  124 (661)
T PHA02917         63 HKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIN--------------DFNIFSYMKSKNVDVDLIKVLVE----  124 (661)
T ss_pred             ccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCC--------------CcchHHHHHhhcCCHHHHHHHHH----
Confidence            34567889999999999954    568888875433322              12356788999999999999999    


Q ss_pred             CCCCchhhcCCCChHHHHHH--HcCCHHHHHHHHHcCCCccc--cCCCCC-----------CCHHHHHHHh---------
Q 005790           97 NGKNSLIRAGYGGWLLYTAA--SAGDLGFVKQLLDKNPLLVF--GEGEYG-----------VTDIFYAAAR---------  152 (677)
Q Consensus        97 ~g~~~~~~d~~G~t~L~~Aa--~~g~~eivk~LL~~g~~~~~--~~~~~g-----------~tpL~~AA~~---------  152 (677)
                      +|++++.+|..|.||||+|+  ..|+.++|++|+++|++...  ..+.+|           .||||+|+..         
T Consensus       125 ~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~  204 (661)
T PHA02917        125 HGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTR  204 (661)
T ss_pred             cCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhccccccccc
Confidence            99999999999999999654  57899999999999985532  223344           5999999752         


Q ss_pred             -cCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCH--HHHHHHHhcCCCccc---cCC
Q 005790          153 -SKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNL--KILKELLENCTDVLT---YRD  226 (677)
Q Consensus       153 -~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~--eivk~LL~~ga~~~~---~~d  226 (677)
                       .++.+++++|+++|++++..+..|                   .||||+|+..|+.  ++|++|++ |+++.+   ..|
T Consensus       205 ~~~~~eiv~~Li~~Gadvn~~d~~G-------------------~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~  264 (661)
T PHA02917        205 AYVRPEVVKCLINHGIKPSSIDKNY-------------------CTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDD  264 (661)
T ss_pred             ccCcHHHHHHHHHCCCCcccCCCCC-------------------CcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccC
Confidence             468999999999999999876654                   7999999999985  89999985 887632   456


Q ss_pred             CCCCcHHHHHHH-------h--CCHHHHHHHHhcCCCCCC-------CCC------------CCCcHHHHHH---HcCC-
Q 005790          227 KQGSTILHAAAG-------R--GQVEVVKDLIASFDIINS-------TDH------------QGNTPLHIAA---YRGQ-  274 (677)
Q Consensus       227 ~~g~TpL~~A~~-------~--g~~eivk~Ll~~ga~in~-------~d~------------~g~tpL~~A~---~~g~-  274 (677)
                      ..|.+|+++|+.       .  .+.++|++||+.|++...       .+.            .+.++||.+.   ..|. 
T Consensus       265 ~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~  344 (661)
T PHA02917        265 LTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDI  344 (661)
T ss_pred             cccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCC
Confidence            678899999984       1  178999999999987421       111            2334544433   4665 


Q ss_pred             -HHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHh
Q 005790          275 -PAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAIT  353 (677)
Q Consensus       275 -~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~  353 (677)
                       .+++++||++| ++++.++..|.++..              ....+++++|+...    |++++..+.+|.||||.|++
T Consensus       345 ~~~~v~~Ll~~G-Advn~~~~~g~~~~~--------------~~~~~~i~~LL~~~----ga~~~~~~~~G~TpL~~a~~  405 (661)
T PHA02917        345 DIPLVECMLEYG-AVVNKEAIHGYFRNI--------------NIDSYTMKYLLKKE----GGDAVNHLDDGEIPIGHLCK  405 (661)
T ss_pred             cHHHHHHHHHcC-CCCCCCCccccchhh--------------cCCHHHHHHHHHhc----CCCccccCCCCCChhHHHHH
Confidence             56999999999 778888888887541              23345667776531    13355567789999999975


Q ss_pred             CCC----------------------cHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCC
Q 005790          354 GNV----------------------HLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGC  411 (677)
Q Consensus       354 ~~~----------------------~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~  411 (677)
                      .+.                      ..+++++|++ +|+|+|.+|..|+||||+|+..++.+    ++++|+++|+++|.
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~-~GAdIN~kd~~G~TpLh~Aa~~~~~~----~v~~Ll~~GAdin~  480 (661)
T PHA02917        406 SNYGCYNFYTYTYKKGLCDMSYACPILSTINICLP-YLKDINMIDKRGETLLHKAVRYNKQS----LVSLLLESGSDVNI  480 (661)
T ss_pred             hcccchhhhhhhhhhccchhhhhhhhHHHHHHHHH-CCCCCCCCCCCCcCHHHHHHHcCCHH----HHHHHHHCcCCCCC
Confidence            331                      3578899999 99999999999999999999999876    78999999999999


Q ss_pred             CcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCC
Q 005790          412 QDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSS  454 (677)
Q Consensus       412 ~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~  454 (677)
                      +|..|+|||+.|+....         ..+++++|+++|++++.
T Consensus       481 ~d~~G~T~L~~A~~~~~---------~~~iv~~LL~~ga~i~~  514 (661)
T PHA02917        481 RSNNGYTCIAIAINESR---------NIELLKMLLCHKPTLDC  514 (661)
T ss_pred             CCCCCCCHHHHHHHhCC---------CHHHHHHHHHcCCChhH
Confidence            99999999999985222         27899999999999974


No 10 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.7e-41  Score=372.78  Aligned_cols=383  Identities=14%  Similarity=0.076  Sum_probs=288.8

Q ss_pred             CHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhc---hHHHHHHHHhhhhcCCCCchhhcCCCChHHHH
Q 005790           38 HYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCR---SKVARKLFLECKSKNGKNSLIRAGYGGWLLYT  114 (677)
Q Consensus        38 ~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~---~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~  114 (677)
                      ..+.+++.++..+++|.           ..+..|.|+||+|+..+   +.+++++|++    +|++++.+|..|.||||+
T Consensus        19 ~~~~~~~~~~~~~~in~-----------~kd~~G~TaLh~A~~~~~~~~~eivklLLs----~GAdin~kD~~G~TPLh~   83 (672)
T PHA02730         19 TYKKIKLEIETCHNLSK-----------HIDRRGNNALHCYVSNKCDTDIKIVRLLLS----RGVERLCRNNEGLTPLGV   83 (672)
T ss_pred             hHHHHHHHHHHhcchhh-----------hcCCCCCcHHHHHHHcCCcCcHHHHHHHHh----CCCCCcccCCCCCChHHH
Confidence            35677888888777762           24567999999999987   5899999999    999999999999999999


Q ss_pred             HHHcC--CHHHHHHHHHcCCCc-cccCCCCCCCHHHHHHH-hcCCHHHHHHHHh-cCCCcccccccCCcchhhhhcchhh
Q 005790          115 AASAG--DLGFVKQLLDKNPLL-VFGEGEYGVTDIFYAAA-RSKNCDVFRLIYD-FAVSPRFLTAKGGELEEHIEEIPSV  189 (677)
Q Consensus       115 Aa~~g--~~eivk~LL~~g~~~-~~~~~~~g~tpL~~AA~-~~g~~evv~lLl~-~Gad~~~~~~~~~~~~~~~~~~~~~  189 (677)
                      |+..+  +.++|++|++.|+.. ++..+..+.+||+.+++ .+++.++|++|+. .+++|+......             
T Consensus        84 Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~-------------  150 (672)
T PHA02730         84 YSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYY-------------  150 (672)
T ss_pred             HHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhh-------------
Confidence            99977  799999999997533 45567778999988864 3789999999996 778887542210             


Q ss_pred             hhhhccchHHHHHHhcCCHHHHHHHHhcCCCcccc------CCCCCC-cHHHHH------HHhCCHHHHHHHHhcCCCCC
Q 005790          190 YKWEMMNRAVHAAARGGNLKILKELLENCTDVLTY------RDKQGS-TILHAA------AGRGQVEVVKDLIASFDIIN  256 (677)
Q Consensus       190 ~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~------~d~~g~-TpL~~A------~~~g~~eivk~Ll~~ga~in  256 (677)
                       ....+.+|+++|...++.|+|++|+++|+++...      .+..+. |.||++      ..+++.|++++|+++||++|
T Consensus       151 -~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN  229 (672)
T PHA02730        151 -IHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIH  229 (672)
T ss_pred             -ccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCC
Confidence             0012468999999999999999999999998411      333444 455544      35578999999999999999


Q ss_pred             CCCCCCCcHHHH--HHHcCCHHHHHHHHH--------------------------------hCCCCccccC--CCCCchh
Q 005790          257 STDHQGNTPLHI--AAYRGQPAVVEALIL--------------------------------ASPSMISVKN--TSGETFL  300 (677)
Q Consensus       257 ~~d~~g~tpL~~--A~~~g~~~iv~~LL~--------------------------------~g~~~~~~~~--~~g~tpL  300 (677)
                      .+|..|.||||+  |...|+.|+|++|++                                .| ++....+  -.|.-++
T Consensus       230 ~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~  308 (672)
T PHA02730        230 GRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYN-VDMEIVNLLIEGRHTL  308 (672)
T ss_pred             CCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCC-cchHHHHHHhhccCcc
Confidence            999999999995  556678999999998                                33 3332200  0111121


Q ss_pred             hhhhh-------cC-c---------------hHHHH-----Hh----hHHHHHHHHHHcccccchhhhhhccCCCCchHH
Q 005790          301 HSAVS-------GF-Q---------------TYAFR-----RL----DRQVKLMKQLASGQIFNMEDIINAKNNDGRTAL  348 (677)
Q Consensus       301 h~A~~-------~~-~---------------~~~~~-----~L----~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpL  348 (677)
                      |....       .+ +               ...++     .+    .-..+++++|+++|     +++|.. ..|.|||
T Consensus       309 ~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~G-----AdIN~k-~~G~TpL  382 (672)
T PHA02730        309 IDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNG-----ATMDKT-TDNNYPL  382 (672)
T ss_pred             hhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCC-----CCCCcC-CCCCcHH
Confidence            11111       00 1               01111     11    14588999998887     557875 7899999


Q ss_pred             HHHHhCCCc---HHHHHHHhhCCCC--CccccCCCCCcHHHH---HhhCCC----Cch-HHHHHHHHHHcCCCCCCCccc
Q 005790          349 HMAITGNVH---LELVQLLMSAPSI--NVNVRDNDGMTTLDL---LKQRPQ----SAS-SDILIRHLISAGGIFGCQDYS  415 (677)
Q Consensus       349 h~A~~~~~~---~eiv~lLL~~~Ga--din~~d~~G~TpL~~---A~~~~~----~~~-~~~lv~~Ll~~Gadin~~d~~  415 (677)
                      |+|+..+.+   .+++++|++ +|+  |+|.+|..|.||||.   |...+.    .+. ...++++|+++|||+|.+|..
T Consensus       383 H~Aa~~nnn~i~~eIvelLIs-~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~  461 (672)
T PHA02730        383 HDYFVNNNNIVDVNVVRFIVE-NNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNE  461 (672)
T ss_pred             HHHHHHcCCcchHHHHHHHHH-cCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCC
Confidence            999887622   899999999 887  699999999999994   332321    122 224699999999999999999


Q ss_pred             CCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCCCCC-CCCCCCCCCC
Q 005790          416 ARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSDGN-ANSGSGGMSS  467 (677)
Q Consensus       416 G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~~~-~g~t~~~~~~  467 (677)
                      |+||||+|+....          .+++++|+++||+++..+. .|.|+....+
T Consensus       462 G~TPLh~Aa~~~~----------~eive~LI~~GAdIN~~d~~~g~TaL~~Aa  504 (672)
T PHA02730        462 NKTLLYYAVDVNN----------IQFARRLLEYGASVNTTSRSIINTAIQKSS  504 (672)
T ss_pred             CCCHHHHHHHhCC----------HHHHHHHHHCCCCCCCCCCcCCcCHHHHHH
Confidence            9999999988533          7899999999999999996 5777665443


No 11 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.7e-41  Score=369.63  Aligned_cols=322  Identities=22%  Similarity=0.300  Sum_probs=279.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhcCC-chhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcC
Q 005790           28 SPIDWAAANGHYDLVRELLRIDGN-HLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAG  106 (677)
Q Consensus        28 TpL~~Aa~~G~~diV~~LL~~ga~-~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~  106 (677)
                      .-|..|+..|++++|+.|++.+.. ++.            ....+.|||+.|+..++.+++++|++    .|++++..+.
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~------------~~~~~~tpL~~A~~~g~~~iv~~Ll~----~Ga~~n~~~~   66 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINI------------SVDETTTPLIDAIRSGDAKIVELFIK----HGADINHINT   66 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCC------------cCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCCCC
Confidence            358899999999999999986544 332            24467899999999999999999999    9999999999


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcc
Q 005790          107 YGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEI  186 (677)
Q Consensus       107 ~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~  186 (677)
                      .|.||||+|+..|+.++|++|+++|+...         .+.   ......+++++|++.|++++..+..           
T Consensus        67 ~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~---------~~~---~~~~~~~~i~~ll~~g~d~n~~~~~-----------  123 (434)
T PHA02874         67 KIPHPLLTAIKIGAHDIIKLLIDNGVDTS---------ILP---IPCIEKDMIKTILDCGIDVNIKDAE-----------  123 (434)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCCCC---------cch---hccCCHHHHHHHHHCcCCCCCCCCC-----------
Confidence            99999999999999999999999987431         111   2446789999999999999876544           


Q ss_pred             hhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 005790          187 PSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPL  266 (677)
Q Consensus       187 ~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL  266 (677)
                              |.||||+|+..|+.++|++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus       124 --------g~T~Lh~A~~~~~~~~v~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL  194 (434)
T PHA02874        124 --------LKTFLHYAIKKGDLESIKMLFEYGADV-NIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPL  194 (434)
T ss_pred             --------CccHHHHHHHCCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence                    379999999999999999999999999 78999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCch
Q 005790          267 HIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRT  346 (677)
Q Consensus       267 ~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~T  346 (677)
                      |+|+..|+.+++++|++.| ++++..+..|.||||+|+..+.           +.+.+|+.+      +++|.+|..|.|
T Consensus       195 ~~A~~~g~~~iv~~Ll~~g-~~i~~~~~~g~TpL~~A~~~~~-----------~~i~~Ll~~------~~in~~d~~G~T  256 (434)
T PHA02874        195 HNAAEYGDYACIKLLIDHG-NHIMNKCKNGFTPLHNAIIHNR-----------SAIELLINN------ASINDQDIDGST  256 (434)
T ss_pred             HHHHHcCCHHHHHHHHhCC-CCCcCCCCCCCCHHHHHHHCCh-----------HHHHHHHcC------CCCCCcCCCCCC
Confidence            9999999999999999999 6788899999999999998542           344555542      448889999999


Q ss_pred             HHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCch
Q 005790          347 ALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRA  419 (677)
Q Consensus       347 pLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~  419 (677)
                      |||+|+..+.+.+++++|++ .|+|++.+|..|.||||+|+..++...   +++.|+..++.++..+..+.+.
T Consensus       257 pLh~A~~~~~~~~iv~~Ll~-~gad~n~~d~~g~TpL~~A~~~~~~~~---~ik~ll~~~~~~~~~~~~~~~~  325 (434)
T PHA02874        257 PLHHAINPPCDIDIIDILLY-HKADISIKDNKGENPIDTAFKYINKDP---VIKDIIANAVLIKEADKLKDSD  325 (434)
T ss_pred             HHHHHHhcCCcHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHhCCccH---HHHHHHHhcCchhhccccchhH
Confidence            99999987658999999999 999999999999999999999884432   6888999998887766655333


No 12 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=1.8e-41  Score=366.22  Aligned_cols=362  Identities=20%  Similarity=0.204  Sum_probs=310.1

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcC
Q 005790           27 ASPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAG  106 (677)
Q Consensus        27 ~TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~  106 (677)
                      .++++.+...   |.+.++++....+..+            ...+++++|.++..+..      +.    .-......|.
T Consensus        32 ~~~~~~~~~d---D~~tli~~kns~~~~~------------~~~gd~~~~~~~~~~y~------~~----~~~~~~a~D~   86 (929)
T KOG0510|consen   32 DSQALADTLD---DRHTLILEKNSSTPGK------------RAFGDTELHHASARNYI------LS----KLAISYAKDS   86 (929)
T ss_pred             hHHHHHhhHH---HHHHHHHHhccccchh------------hhhchhHHHHHHhhcch------hh----hhhhhhhhhc
Confidence            3555555553   7888888876554322            34578888888877644      11    3345566788


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcc
Q 005790          107 YGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEI  186 (677)
Q Consensus       107 ~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~  186 (677)
                      .|.||||+|+.....+.|++|++.|+ +....+.++.+|+|+|+ ..+..+++++|+++|+|+|..+..+          
T Consensus        87 ~~n~~l~~a~~~~~~~~i~~Lls~ga-d~~~~n~~~~aplh~A~-~~~~~s~L~~Ll~~~~dvnl~de~~----------  154 (929)
T KOG0510|consen   87 ADNTPLHAAVEYNQGDKIQVLLSYGA-DTPLRNLNKNAPLHLAA-DSGNYSCLKLLLDYGADVNLEDENG----------  154 (929)
T ss_pred             ccCchhHHHhhcchHHHHHHHHhcCC-CCChhhhhccCchhhcc-ccchHHHHHHHHHhcCCccccccCC----------
Confidence            99999999999999999999999998 56678899999999995 8899999999999999999776554          


Q ss_pred             hhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHh-----cCCCCCCCCCC
Q 005790          187 PSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIA-----SFDIINSTDHQ  261 (677)
Q Consensus       187 ~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~-----~ga~in~~d~~  261 (677)
                               .||||.|+..++.|+.+.|++.|+++ ...|..|.+|+|.|+.+|..++.+..+.     .+..+|..+..
T Consensus       155 ---------~TpLh~A~~~~~~E~~k~Li~~~a~~-~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~  224 (929)
T KOG0510|consen  155 ---------FTPLHLAARKNKVEAKKELINKGADP-CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNE  224 (929)
T ss_pred             ---------CchhhHHHhcChHHHHHHHHhcCCCC-CcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCC
Confidence                     79999999999999999999999999 7889999999999999999999999998     67789999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCC--------------ccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHc
Q 005790          262 GNTPLHIAAYRGQPAVVEALILASPSM--------------ISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLAS  327 (677)
Q Consensus       262 g~tpL~~A~~~g~~~iv~~LL~~g~~~--------------~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~  327 (677)
                      +.||||.|+..|++++++.+|+.+..+              ++..|.+|.||||+|++.|+.          +.+..|+.
T Consensus       225 ~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~----------~svd~Ll~  294 (929)
T KOG0510|consen  225 KATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGP----------ESVDNLLG  294 (929)
T ss_pred             CCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCCh----------hHHHHHHH
Confidence            999999999999999999999987544              456789999999999996555          44555544


Q ss_pred             ccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhh-CCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcC
Q 005790          328 GQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMS-APSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAG  406 (677)
Q Consensus       328 ~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~-~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~G  406 (677)
                      .     |++++.++.++.||||.|+..| +.++|+-||+ ..-...|..|..|+||||+|+..|+..    ++++|++.|
T Consensus       295 ~-----Ga~I~~kn~d~~spLH~AA~yg-~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~----v~qlLl~~G  364 (929)
T KOG0510|consen  295 F-----GASINSKNKDEESPLHFAAIYG-RINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDR----VVQLLLNKG  364 (929)
T ss_pred             c-----CCcccccCCCCCCchHHHHHcc-cHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHH----HHHHHHhcC
Confidence            4     4779999999999999999998 9999999998 444678888999999999999999977    799999999


Q ss_pred             CCCC---CCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCCCCCCCCCCCCC
Q 005790          407 GIFG---CQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSDGNANSGSGGM  465 (677)
Q Consensus       407 adin---~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~~~~g~t~~~~  465 (677)
                      |+..   ..|.+|.||||.|+....          ..+|++|+.+||++..++..|.++...
T Consensus       365 A~~~~~~e~D~dg~TaLH~Aa~~g~----------~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  365 ALFLNMSEADSDGNTALHLAAKYGN----------TSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             hhhhcccccccCCchhhhHHHHhcc----------HHHHHHHHHcCCceeeccccccccccc
Confidence            9988   569999999999988533          679999999999999999999988886


No 13 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.9e-40  Score=366.02  Aligned_cols=315  Identities=21%  Similarity=0.244  Sum_probs=273.8

Q ss_pred             cHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhc
Q 005790           74 QFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARS  153 (677)
Q Consensus        74 ~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~  153 (677)
                      .+..|+..|+.++++.|++   ..+..++..+..|.||||.|+..|+.++|++|++.|+ +++..+..|.|||++|+ ..
T Consensus         4 ~l~~ai~~gd~~~v~~ll~---~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga-~~n~~~~~~~t~L~~A~-~~   78 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIK---NKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGA-DINHINTKIPHPLLTAI-KI   78 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHH---cCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHH-Hc
Confidence            4778899999999988886   2456678888899999999999999999999999997 55677888999999985 77


Q ss_pred             CCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHH
Q 005790          154 KNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTIL  233 (677)
Q Consensus       154 g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL  233 (677)
                      |+.+++++|+++|+++...                             ++.....+++++|++.|+++ +.++..|.|||
T Consensus        79 ~~~~iv~~Ll~~g~~~~~~-----------------------------~~~~~~~~~i~~ll~~g~d~-n~~~~~g~T~L  128 (434)
T PHA02874         79 GAHDIIKLLIDNGVDTSIL-----------------------------PIPCIEKDMIKTILDCGIDV-NIKDAELKTFL  128 (434)
T ss_pred             CCHHHHHHHHHCCCCCCcc-----------------------------hhccCCHHHHHHHHHCcCCC-CCCCCCCccHH
Confidence            9999999999999876422                             12234678999999999999 78899999999


Q ss_pred             HHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHH
Q 005790          234 HAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFR  313 (677)
Q Consensus       234 ~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~  313 (677)
                      |+|+..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|++.| ++++..+..|.||||+|+..       
T Consensus       129 h~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-~~~n~~~~~g~tpL~~A~~~-------  200 (434)
T PHA02874        129 HYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG-AYANVKDNNGESPLHNAAEY-------  200 (434)
T ss_pred             HHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHc-------
Confidence            9999999999999999999999999999999999999999999999999999 67889999999999999994       


Q ss_pred             HhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCC-CC
Q 005790          314 RLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRP-QS  392 (677)
Q Consensus       314 ~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~-~~  392 (677)
                         ++.+++++|++.+     ++++.++..|.||||+|+..+  .+++++|+.  |+++|.+|..|+||||+|+..+ +.
T Consensus       201 ---g~~~iv~~Ll~~g-----~~i~~~~~~g~TpL~~A~~~~--~~~i~~Ll~--~~~in~~d~~G~TpLh~A~~~~~~~  268 (434)
T PHA02874        201 ---GDYACIKLLIDHG-----NHIMNKCKNGFTPLHNAIIHN--RSAIELLIN--NASINDQDIDGSTPLHHAINPPCDI  268 (434)
T ss_pred             ---CCHHHHHHHHhCC-----CCCcCCCCCCCCHHHHHHHCC--hHHHHHHHc--CCCCCCcCCCCCCHHHHHHhcCCcH
Confidence               5567777777665     458888999999999999865  467777774  8999999999999999999876 44


Q ss_pred             chHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCCCC
Q 005790          393 ASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSDG  456 (677)
Q Consensus       393 ~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~~  456 (677)
                      +    ++++|+++|++++.+|..|+|||+.|++...         ..++++.|+.+++.++..+
T Consensus       269 ~----iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~---------~~~~ik~ll~~~~~~~~~~  319 (434)
T PHA02874        269 D----IIDILLYHKADISIKDNKGENPIDTAFKYIN---------KDPVIKDIIANAVLIKEAD  319 (434)
T ss_pred             H----HHHHHHHCcCCCCCCCCCCCCHHHHHHHhCC---------ccHHHHHHHHhcCchhhcc
Confidence            4    7999999999999999999999999987432         1568999999998776543


No 14 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=4e-41  Score=363.53  Aligned_cols=335  Identities=25%  Similarity=0.326  Sum_probs=289.6

Q ss_pred             ccccCcHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCch
Q 005790           23 QWWYASPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSL  102 (677)
Q Consensus        23 ~~~g~TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~  102 (677)
                      +-+|+|++|.|+..+.. .-+.....                 ..+..+.++||+|++.+..+.++.|++    .|+++.
T Consensus        58 ~~~gd~~~~~~~~~~y~-~~~~~~~~-----------------a~D~~~n~~l~~a~~~~~~~~i~~Lls----~gad~~  115 (929)
T KOG0510|consen   58 RAFGDTELHHASARNYI-LSKLAISY-----------------AKDSADNTPLHAAVEYNQGDKIQVLLS----YGADTP  115 (929)
T ss_pred             hhhchhHHHHHHhhcch-hhhhhhhh-----------------hhhcccCchhHHHhhcchHHHHHHHHh----cCCCCC
Confidence            34688999999998876 11111111                 234568899999999999999999999    999999


Q ss_pred             hhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhh
Q 005790          103 IRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEH  182 (677)
Q Consensus       103 ~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~  182 (677)
                      ..+.++.+|+|+|+..|+.++++.|+++++ +++..|+.|.||||.|| ..++.|..+.|++.|++|...+..+      
T Consensus       116 ~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~-dvnl~de~~~TpLh~A~-~~~~~E~~k~Li~~~a~~~K~~~~~------  187 (929)
T KOG0510|consen  116 LRNLNKNAPLHLAADSGNYSCLKLLLDYGA-DVNLEDENGFTPLHLAA-RKNKVEAKKELINKGADPCKSDIDG------  187 (929)
T ss_pred             hhhhhccCchhhccccchHHHHHHHHHhcC-CccccccCCCchhhHHH-hcChHHHHHHHHhcCCCCCcccCcC------
Confidence            999999999999999999999999999994 88889999999999996 5588888899999999988666554      


Q ss_pred             hhcchhhhhhhccchHHHHHHhcCCHHHHHHHHh-----cCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCC---
Q 005790          183 IEEIPSVYKWEMMNRAVHAAARGGNLKILKELLE-----NCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDI---  254 (677)
Q Consensus       183 ~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~-----~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~---  254 (677)
                                   ++|+|.|++.|..|+.+.++.     ++..+ +..+..+.||||.|+..|++++++.+|+.|..   
T Consensus       188 -------------~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~i-n~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~  253 (929)
T KOG0510|consen  188 -------------NFPIHEAARSGSKECMEIFLPEHGYERQTHI-NFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIAD  253 (929)
T ss_pred             -------------CchHHHHHHhcchhhhhhhhccccchhhccc-ccccCCCCcchhhhhhcCCHHHHHHHHhCccccch
Confidence                         679999999999999999998     66677 77889999999999999999999999998764   


Q ss_pred             ------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHH
Q 005790          255 ------------INSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLM  322 (677)
Q Consensus       255 ------------in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv  322 (677)
                                  +|..|.+|.||||+|++.|+++.++.|+..| ++++.++.++.||||.|+++|+..+++.|       
T Consensus       254 ~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~G-a~I~~kn~d~~spLH~AA~yg~~ntv~rL-------  325 (929)
T KOG0510|consen  254 VQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFG-ASINSKNKDEESPLHFAAIYGRINTVERL-------  325 (929)
T ss_pred             hhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcC-CcccccCCCCCCchHHHHHcccHHHHHHH-------
Confidence                        4556889999999999999999999999999 77999999999999999997666555544       


Q ss_pred             HHHHc-ccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCcc---ccCCCCCcHHHHHhhCCCCchHHHH
Q 005790          323 KQLAS-GQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVN---VRDNDGMTTLDLLKQRPQSASSDIL  398 (677)
Q Consensus       323 ~~Ll~-~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin---~~d~~G~TpL~~A~~~~~~~~~~~l  398 (677)
                         ++ .+    -.++|..|..|.||||+|+..| |..++++||+ .||+.+   ..|.+|.||||+|+..|+..    .
T Consensus       326 ---L~~~~----~rllne~D~~g~tpLHlaa~~g-H~~v~qlLl~-~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~----a  392 (929)
T KOG0510|consen  326 ---LQESD----TRLLNESDLHGMTPLHLAAKSG-HDRVVQLLLN-KGALFLNMSEADSDGNTALHLAAKYGNTS----A  392 (929)
T ss_pred             ---HhCcC----ccccccccccCCCchhhhhhcC-HHHHHHHHHh-cChhhhcccccccCCchhhhHHHHhccHH----H
Confidence               44 22    1347888999999999999888 9999999999 999988   56999999999999999988    5


Q ss_pred             HHHHHHcCCCCCCCcccCCchHHH
Q 005790          399 IRHLISAGGIFGCQDYSARRAIAS  422 (677)
Q Consensus       399 v~~Ll~~Gadin~~d~~G~T~L~~  422 (677)
                      ++.|+.+||++...+..|.+++++
T Consensus       393 v~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  393 VQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             HHHHHHcCCceeeccccccccccc
Confidence            899999999999999999999874


No 15 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=1.7e-41  Score=388.98  Aligned_cols=399  Identities=22%  Similarity=0.227  Sum_probs=298.4

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhc
Q 005790           26 YASPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRA  105 (677)
Q Consensus        26 g~TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d  105 (677)
                      +.||||.||..+.++++++++.+|+++.-            .+..+.+++|.|+..++..++.+++.    +|+.++..+
T Consensus       209 ~~tpl~~a~~~nri~~~eLll~~gadv~a------------~d~~gl~~lh~a~~~g~~~i~~~l~~----~ga~~~~~~  272 (1143)
T KOG4177|consen  209 GFTPLHIACKKNRIKVVELLLKHGADVSA------------KDESGLTPLHVAAFMGHLDIVKLLLQ----HGASVNVST  272 (1143)
T ss_pred             CCCchhhhccccccceeeeeeeccCcCCc------------ccccCccHHHHHHhccchhHHHHHHh----cccccCccc
Confidence            44666666666666666666666666532            34455666666666666666666665    666666666


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhc
Q 005790          106 GYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEE  185 (677)
Q Consensus       106 ~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~  185 (677)
                      -.|.||+|.|++.+..+++++|+++|+ ++...+....||++.+ ...|..++++++++.++.++..+..+.........
T Consensus       273 vr~~tplh~AA~~~~~e~~~~ll~~ga-~~~~~~~~~kt~l~~a-~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~  350 (1143)
T KOG4177|consen  273 VRGETPLHMAARAGQVEVCKLLLQNGA-DVLAKARDDQTPLHIA-SRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAK  350 (1143)
T ss_pred             ccccCcchhhhccchhhhHhhhhccCc-ccccccccccChhhhh-cccchHHHHHHHhhccCCccccCcCCcccccHhhh
Confidence            666666666666666666666666654 3444455555666655 34456666666666666555544443322221111


Q ss_pred             ch--------------hhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhc
Q 005790          186 IP--------------SVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIAS  251 (677)
Q Consensus       186 ~~--------------~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~  251 (677)
                      ..              ...-.+.+.+|+|.|+..|..+++++++.+|+++ +..+..|.||||.|+..++..+|+.++++
T Consensus       351 ~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~-~~~gk~gvTplh~aa~~~~~~~v~l~l~~  429 (1143)
T KOG4177|consen  351 EGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADP-NSAGKNGVTPLHVAAHYGNPRVVKLLLKR  429 (1143)
T ss_pred             hhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCCc-ccCCCCCcceeeehhhccCcceEEEEecc
Confidence            10              1123344578999999999999999999999997 88899999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHh---------------
Q 005790          252 FDIINSTDHQGNTPLHIAAYRG-QPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRL---------------  315 (677)
Q Consensus       252 ga~in~~d~~g~tpL~~A~~~g-~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L---------------  315 (677)
                      |++++..+..|.||+|+|+..| ..++...+++.+ .+++.....|.||||.|+..|+.+.+..+               
T Consensus       430 gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g-~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l  508 (1143)
T KOG4177|consen  430 GASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYG-ADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGL  508 (1143)
T ss_pred             CCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcC-CCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhcc
Confidence            9999999999999999999999 788888888777 77899999999999999998888777666               


Q ss_pred             --------hHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHh
Q 005790          316 --------DRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLK  387 (677)
Q Consensus       316 --------~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~  387 (677)
                              .....+++.+++++     ++++.++..|.||||+||..| +..+|++||+ +|+|++.+++.|+||||.||
T Consensus       509 ~~lhla~~~~~v~~~~~l~~~g-----a~v~~~~~r~~TpLh~A~~~g-~v~~VkfLLe-~gAdv~ak~~~G~TPLH~Aa  581 (1143)
T KOG4177|consen  509 TPLHLAADEDTVKVAKILLEHG-----ANVDLRTGRGYTPLHVAVHYG-NVDLVKFLLE-HGADVNAKDKLGYTPLHQAA  581 (1143)
T ss_pred             chhhhhhhhhhHHHHHHHhhcC-----CceehhcccccchHHHHHhcC-CchHHHHhhh-CCccccccCCCCCChhhHHH
Confidence                    23344555555554     558888999999999999999 9999999999 99999999999999999999


Q ss_pred             hCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCC-----CCCCCCCCCCC
Q 005790          388 QRPQSASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGID-----VSSDGNANSGS  462 (677)
Q Consensus       388 ~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad-----~~~~~~~g~t~  462 (677)
                      ..|+.+    ++++|+++||++|..|.+|.|||+.|.....          ++++++|+..|++     .......|.++
T Consensus       582 ~~G~~~----i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~----------~~~~k~l~~~~~~~~~~~~~~e~~~g~~p  647 (1143)
T KOG4177|consen  582 QQGHND----IAELLLKHGASVNAADLDGFTPLHIAVRLGY----------LSVVKLLKVVTATPAATDPVKENRKGAVP  647 (1143)
T ss_pred             HcChHH----HHHHHHHcCCCCCcccccCcchhHHHHHhcc----------cchhhHHHhccCccccccchhhhhcccCh
Confidence            999877    7999999999999999999999999988533          7799999999999     54445555555


Q ss_pred             CCC
Q 005790          463 GGM  465 (677)
Q Consensus       463 ~~~  465 (677)
                      .+.
T Consensus       648 ~~v  650 (1143)
T KOG4177|consen  648 EDV  650 (1143)
T ss_pred             hhH
Confidence            443


No 16 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.4e-40  Score=367.52  Aligned_cols=292  Identities=22%  Similarity=0.187  Sum_probs=260.4

Q ss_pred             HHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcC---CHHHHHHHHHcCCCccccCCCCCCCHHHHHHHh
Q 005790           76 DDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAG---DLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAAR  152 (677)
Q Consensus        76 ~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g---~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~  152 (677)
                      ..++.....+++++|++    .|++++.++..|.||||+|+..+   +.++|++|++.|+ +++..+..|.||||+|+ .
T Consensus        19 ~~~~~~~~~~~v~~Ll~----~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Ga-din~~~~~g~TpLh~A~-~   92 (471)
T PHA03095         19 LLNASNVTVEEVRRLLA----AGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGA-DVNAPERCGFTPLHLYL-Y   92 (471)
T ss_pred             HHcCCCCCHHHHHHHHH----cCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCC-CCCCCCCCCCCHHHHHH-H
Confidence            34556777899999998    99999999999999999999999   9999999999998 67778889999999996 5


Q ss_pred             cC-CHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHH--hcCCHHHHHHHHhcCCCccccCCCCC
Q 005790          153 SK-NCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAA--RGGNLKILKELLENCTDVLTYRDKQG  229 (677)
Q Consensus       153 ~g-~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~--~~g~~eivk~LL~~ga~~~~~~d~~g  229 (677)
                      .| +.+++++|+++|++++..+..                   |+||||+|+  ..++.+++++|+++|+++ +..+..|
T Consensus        93 ~~~~~~iv~lLl~~ga~in~~~~~-------------------g~tpLh~a~~~~~~~~~iv~~Ll~~gad~-~~~d~~g  152 (471)
T PHA03095         93 NATTLDVIKLLIKAGADVNAKDKV-------------------GRTPLHVYLSGFNINPKVIRLLLRKGADV-NALDLYG  152 (471)
T ss_pred             cCCcHHHHHHHHHcCCCCCCCCCC-------------------CCCHHHHHhhCCcCCHHHHHHHHHcCCCC-CccCCCC
Confidence            56 699999999999999876654                   379999999  567899999999999999 7899999


Q ss_pred             CcHHHHHHHhC--CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHHhCCCCccccCCCCCchhhhhhh
Q 005790          230 STILHAAAGRG--QVEVVKDLIASFDIINSTDHQGNTPLHIAAYR--GQPAVVEALILASPSMISVKNTSGETFLHSAVS  305 (677)
Q Consensus       230 ~TpL~~A~~~g--~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~--g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~  305 (677)
                      .||||+|+..+  +.+++++|+++|++++..|..|.||||+|+..  ++.++++.|++.| ++++.+|..|.||||+|+.
T Consensus       153 ~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g-~~~~~~d~~g~tpLh~Aa~  231 (471)
T PHA03095        153 MTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAG-CDPAATDMLGNTPLHSMAT  231 (471)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHh
Confidence            99999999876  68999999999999999999999999999875  7889999999999 7899999999999999998


Q ss_pred             cCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHH
Q 005790          306 GFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDL  385 (677)
Q Consensus       306 ~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~  385 (677)
                      .+..        ...++..|+..+     +++|.+|..|.||||+|+..| +.++|++||+ .|+|+|.+|..|.||||+
T Consensus       232 ~~~~--------~~~~v~~ll~~g-----~din~~d~~g~TpLh~A~~~~-~~~~v~~LL~-~gad~n~~~~~g~tpl~~  296 (471)
T PHA03095        232 GSSC--------KRSLVLPLLIAG-----ISINARNRYGQTPLHYAAVFN-NPRACRRLIA-LGADINAVSSDGNTPLSL  296 (471)
T ss_pred             cCCc--------hHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHH-cCCCCcccCCCCCCHHHH
Confidence            6642        234566666655     569999999999999999988 9999999999 999999999999999999


Q ss_pred             HhhCCCCchHHHHHHHHHHcCCCCCCCc
Q 005790          386 LKQRPQSASSDILIRHLISAGGIFGCQD  413 (677)
Q Consensus       386 A~~~~~~~~~~~lv~~Ll~~Gadin~~d  413 (677)
                      |+..++.+    +++.|++.+++++..+
T Consensus       297 A~~~~~~~----~v~~LL~~~~~~~~~~  320 (471)
T PHA03095        297 MVRNNNGR----AVRAALAKNPSAETVA  320 (471)
T ss_pred             HHHhCCHH----HHHHHHHhCCCHHHHH
Confidence            99999987    7899999999987544


No 17 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.3e-39  Score=361.65  Aligned_cols=292  Identities=21%  Similarity=0.212  Sum_probs=259.8

Q ss_pred             HHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcC---CHHHHHHHHhcCCCcccccccCCcchhhhhcchhh
Q 005790          113 YTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSK---NCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSV  189 (677)
Q Consensus       113 ~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g---~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~  189 (677)
                      ..|+..+++++|++|++.|+ +++..+..|.||||+|+ ..+   +.+++++|+++|++++..+..              
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga-~vn~~~~~g~t~Lh~a~-~~~~~~~~~iv~~Ll~~Gadin~~~~~--------------   82 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGA-DVNFRGEYGKTPLHLYL-HYSSEKVKDIVRLLLEAGADVNAPERC--------------   82 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCC-CcccCCCCCCCHHHHHH-HhcCCChHHHHHHHHHCCCCCCCCCCC--------------
Confidence            56778899999999999997 56788999999999996 546   999999999999999977654              


Q ss_pred             hhhhccchHHHHHHhcC-CHHHHHHHHhcCCCccccCCCCCCcHHHHHH--HhCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 005790          190 YKWEMMNRAVHAAARGG-NLKILKELLENCTDVLTYRDKQGSTILHAAA--GRGQVEVVKDLIASFDIINSTDHQGNTPL  266 (677)
Q Consensus       190 ~~~~~~~t~Lh~A~~~g-~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~--~~g~~eivk~Ll~~ga~in~~d~~g~tpL  266 (677)
                           |.||||+|+..| +.+++++|+++|+++ +..+..|.||||+|+  ..++.+++++|+++|++++..|..|.|||
T Consensus        83 -----g~TpLh~A~~~~~~~~iv~lLl~~ga~i-n~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL  156 (471)
T PHA03095         83 -----GFTPLHLYLYNATTLDVIKLLIKAGADV-NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPL  156 (471)
T ss_pred             -----CCCHHHHHHHcCCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence                 479999999999 599999999999998 889999999999999  56789999999999999999999999999


Q ss_pred             HHHHHcC--CHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCC
Q 005790          267 HIAAYRG--QPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDG  344 (677)
Q Consensus       267 ~~A~~~g--~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G  344 (677)
                      |+|+..+  +.+++++|++.| ++++..+..|.||||+++...        ....++++.|++.+     ++++.+|..|
T Consensus       157 ~~a~~~~~~~~~iv~~Ll~~g-~~~~~~d~~g~t~Lh~~~~~~--------~~~~~i~~~Ll~~g-----~~~~~~d~~g  222 (471)
T PHA03095        157 AVLLKSRNANVELLRLLIDAG-ADVYAVDDRFRSLLHHHLQSF--------KPRARIVRELIRAG-----CDPAATDMLG  222 (471)
T ss_pred             HHHHHcCCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHHC--------CCcHHHHHHHHHcC-----CCCcccCCCC
Confidence            9999876  689999999999 566667999999999998743        34567788887766     5689999999


Q ss_pred             chHHHHHHhCCCcH--HHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHH
Q 005790          345 RTALHMAITGNVHL--ELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIAS  422 (677)
Q Consensus       345 ~TpLh~A~~~~~~~--eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~  422 (677)
                      .||||+|+..+ +.  .+++.|++ .|+++|.+|..|+||||+|+..|+.+    ++++|+++|||+|.+|..|+|||+.
T Consensus       223 ~tpLh~Aa~~~-~~~~~~v~~ll~-~g~din~~d~~g~TpLh~A~~~~~~~----~v~~LL~~gad~n~~~~~g~tpl~~  296 (471)
T PHA03095        223 NTPLHSMATGS-SCKRSLVLPLLI-AGISINARNRYGQTPLHYAAVFNNPR----ACRRLIALGADINAVSSDGNTPLSL  296 (471)
T ss_pred             CCHHHHHHhcC-CchHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCCHHHH
Confidence            99999999977 43  68899999 99999999999999999999999987    6899999999999999999999999


Q ss_pred             HHHHhCCCCCCCCccchhhHHHHHHcCCCCCCCC
Q 005790          423 HIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSDG  456 (677)
Q Consensus       423 al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~~  456 (677)
                      |+....          .+++++||++|++++..+
T Consensus       297 A~~~~~----------~~~v~~LL~~~~~~~~~~  320 (471)
T PHA03095        297 MVRNNN----------GRAVRAALAKNPSAETVA  320 (471)
T ss_pred             HHHhCC----------HHHHHHHHHhCCCHHHHH
Confidence            988644          789999999999986543


No 18 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=1.3e-40  Score=381.80  Aligned_cols=403  Identities=23%  Similarity=0.236  Sum_probs=326.3

Q ss_pred             HHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCC
Q 005790           29 PIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYG  108 (677)
Q Consensus        29 pL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G  108 (677)
                      +++.|+..++.+++++|+...++.+.            ....+.+|+|.|+..+...++++++.    +|+++...|..|
T Consensus       179 ~~~~~~~~~~~~~~~ll~~~~~~~~a------------~~~~~~tpl~~a~~~nri~~~eLll~----~gadv~a~d~~g  242 (1143)
T KOG4177|consen  179 RLHVAAHCGHARVAKLLLDKKADPNA------------SALNGFTPLHIACKKNRIKVVELLLK----HGADVSAKDESG  242 (1143)
T ss_pred             hhhHHhhcchHHHHhhhhcccCCccc------------cccCCCCchhhhccccccceeeeeee----ccCcCCcccccC
Confidence            78999999999999999999999864            36679999999999999999999998    999999999999


Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcch-
Q 005790          109 GWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIP-  187 (677)
Q Consensus       109 ~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~-  187 (677)
                      .||||.|+..|+++++.+|+.+++ .++..+..|.||+|+|| ..+..+++++|+++|+++.................. 
T Consensus       243 l~~lh~a~~~g~~~i~~~l~~~ga-~~~~~~vr~~tplh~AA-~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~  320 (1143)
T KOG4177|consen  243 LTPLHVAAFMGHLDIVKLLLQHGA-SVNVSTVRGETPLHMAA-RAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGH  320 (1143)
T ss_pred             ccHHHHHHhccchhHHHHHHhccc-ccCcccccccCcchhhh-ccchhhhHhhhhccCcccccccccccChhhhhcccch
Confidence            999999999999999999999997 66778899999999996 779999999999999999877665433222211111 


Q ss_pred             -------------hhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Q 005790          188 -------------SVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDI  254 (677)
Q Consensus       188 -------------~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~  254 (677)
                                   ..-....+.+|||+++..++.+++.+|...+... ...+..|.||+|.|+..|..+++++|+.+|++
T Consensus       321 ~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~-~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~  399 (1143)
T KOG4177|consen  321 EEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQR-RQAEEKGFTPLHLAVKSGRVSVVELLLEAGAD  399 (1143)
T ss_pred             HHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhcccccc-CcccccCCcchhhhcccCchhHHHhhhhccCC
Confidence                         1223445678888888888888777777777766 66788889999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCc-hHHHHHh------------------
Q 005790          255 INSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQ-TYAFRRL------------------  315 (677)
Q Consensus       255 in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~-~~~~~~L------------------  315 (677)
                      ++.....|.||||.|+..++..+++.+++.+ ++.+..+..|.||+|+|+..+. .+....+                  
T Consensus       400 ~~~~gk~gvTplh~aa~~~~~~~v~l~l~~g-A~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~L  478 (1143)
T KOG4177|consen  400 PNSAGKNGVTPLHVAAHYGNPRVVKLLLKRG-ASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPL  478 (1143)
T ss_pred             cccCCCCCcceeeehhhccCcceEEEEeccC-CChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcch
Confidence            9999999999999999999999999999888 6788899999999999998652 2222111                  


Q ss_pred             -----hHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCC
Q 005790          316 -----DRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRP  390 (677)
Q Consensus       316 -----~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~  390 (677)
                           .++.+++..|++.+     +..+.....|.|+||.|...+ ...+++.+++ .|++++.++..|.||||+|+.+|
T Consensus       479 hlaaq~Gh~~~~~llle~~-----~~~~~~~~~~l~~lhla~~~~-~v~~~~~l~~-~ga~v~~~~~r~~TpLh~A~~~g  551 (1143)
T KOG4177|consen  479 HLAAQEGHTEVVQLLLEGG-----ANDNLDAKKGLTPLHLAADED-TVKVAKILLE-HGANVDLRTGRGYTPLHVAVHYG  551 (1143)
T ss_pred             hhhhccCCchHHHHhhhcC-----CccCccchhccchhhhhhhhh-hHHHHHHHhh-cCCceehhcccccchHHHHHhcC
Confidence                 23344444444333     113333444555555555555 5566666666 68999999999999999999999


Q ss_pred             CCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCCCCCCCCCCCCCCCCCc
Q 005790          391 QSASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSDGNANSGSGGMSSSST  470 (677)
Q Consensus       391 ~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~~~~g~t~~~~~~~~~  470 (677)
                      +.+    +|++|+++|||++.+++.|+||||.|+..-.          .+|+++|+++||++|+.+..|.|+.......+
T Consensus       552 ~v~----~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~----------~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg  617 (1143)
T KOG4177|consen  552 NVD----LVKFLLEHGADVNAKDKLGYTPLHQAAQQGH----------NDIAELLLKHGASVNAADLDGFTPLHIAVRLG  617 (1143)
T ss_pred             Cch----HHHHhhhCCccccccCCCCCChhhHHHHcCh----------HHHHHHHHHcCCCCCcccccCcchhHHHHHhc
Confidence            998    7999999999999999999999999998532          78999999999999999999998876665444


Q ss_pred             cC
Q 005790          471 EL  472 (677)
Q Consensus       471 ~~  472 (677)
                      -.
T Consensus       618 ~~  619 (1143)
T KOG4177|consen  618 YL  619 (1143)
T ss_pred             cc
Confidence            43


No 19 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=5.6e-39  Score=359.46  Aligned_cols=281  Identities=23%  Similarity=0.262  Sum_probs=203.0

Q ss_pred             HHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHH-----HHHhcCCHHH
Q 005790           84 KVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFY-----AAARSKNCDV  158 (677)
Q Consensus        84 ~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~-----AA~~~g~~ev  158 (677)
                      ..+++.+++    .+...+..+..+.||||.|+..|+.++|++|++.|+ +++..+..+.||||+     |+ ..++.++
T Consensus        15 ~~~~~~~~~----~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~-~~~~~~~~~~t~L~~~~~~~a~-~~~~~~i   88 (480)
T PHA03100         15 VKNIKYIIM----EDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGA-DINSSTKNNSTPLHYLSNIKYN-LTDVKEI   88 (480)
T ss_pred             HHHHHHHHh----cCccchhhhcccchhhhhhhccCCHHHHHHHHHcCC-CCCCccccCcCHHHHHHHHHHH-hhchHHH
Confidence            344555555    566666778889999999999999999999999997 556677889999999     84 7799999


Q ss_pred             HHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHH--hcCCHHHHHHHHhcCCCccccCCCCCCcHHHHH
Q 005790          159 FRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAA--RGGNLKILKELLENCTDVLTYRDKQGSTILHAA  236 (677)
Q Consensus       159 v~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~--~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A  236 (677)
                      +++|+++|++++..+..                   |.||||+|+  ..|+.+++++|+++|+++ +..+..|.||||+|
T Consensus        89 v~~Ll~~ga~i~~~d~~-------------------g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A  148 (480)
T PHA03100         89 VKLLLEYGANVNAPDNN-------------------GITPLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENLLHLY  148 (480)
T ss_pred             HHHHHHCCCCCCCCCCC-------------------CCchhhHHHhcccChHHHHHHHHHcCCCC-CccCCCCCcHHHHH
Confidence            99999999988765544                   368999999  999999999999999998 77899999999999


Q ss_pred             HHhC--CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCC------CchhhhhhhcCc
Q 005790          237 AGRG--QVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSG------ETFLHSAVSGFQ  308 (677)
Q Consensus       237 ~~~g--~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g------~tpLh~A~~~~~  308 (677)
                      +..|  +.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++| ++++..+..|      .||||+|+..++
T Consensus       149 ~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~~~~~t~l~~a~~~~~  227 (480)
T PHA03100        149 LESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNG-ADINAGDIETLLFTIFETPLHIAACYNE  227 (480)
T ss_pred             HHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcC-CCccCCCCCCCcHHHHHhHHHHHHHhCc
Confidence            9999  999999999999999999999999999999999999999999998 6677777777      444444444211


Q ss_pred             hHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhh
Q 005790          309 TYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQ  388 (677)
Q Consensus       309 ~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~  388 (677)
                              ...+++++|++.|     +++|.+|..|.||||+|+..+ +.+++++|++ .|+|+|.+|..|.|||++|+.
T Consensus       228 --------~~~~iv~~Ll~~g-----~din~~d~~g~TpL~~A~~~~-~~~iv~~Ll~-~gad~n~~d~~g~tpl~~A~~  292 (480)
T PHA03100        228 --------ITLEVVNYLLSYG-----VPINIKDVYGFTPLHYAVYNN-NPEFVKYLLD-LGANPNLVNKYGDTPLHIAIL  292 (480)
T ss_pred             --------CcHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHH-cCCCCCccCCCCCcHHHHHHH
Confidence                    0033333333332     224444444444444444444 4444444444 444444444444444444444


Q ss_pred             CCCCchHHHHHHHHHHcCCCCC
Q 005790          389 RPQSASSDILIRHLISAGGIFG  410 (677)
Q Consensus       389 ~~~~~~~~~lv~~Ll~~Gadin  410 (677)
                      .++.+    ++++|+++|++++
T Consensus       293 ~~~~~----iv~~Ll~~g~~i~  310 (480)
T PHA03100        293 NNNKE----IFKLLLNNGPSIK  310 (480)
T ss_pred             hCCHH----HHHHHHhcCCCHH
Confidence            44433    3444444444443


No 20 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.5e-38  Score=353.25  Aligned_cols=270  Identities=19%  Similarity=0.206  Sum_probs=187.1

Q ss_pred             cccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHH
Q 005790           70 DDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYA  149 (677)
Q Consensus        70 ~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~A  149 (677)
                      .+.+|||.|+..++.+++++|++    .|++++.+|..|.||||+||..|+.+++++|++.+.....   .++.++++.|
T Consensus        36 ~~~tPLh~A~~~g~~e~vk~Ll~----~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~l~~a  108 (477)
T PHA02878         36 IPFIPLHQAVEARNLDVVKSLLT----RGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV---FYTLVAIKDA  108 (477)
T ss_pred             cCcchHHHHHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc---ccchhhHHHH
Confidence            35556666666666666666666    6667777788888888888888888888888887653321   4567888887


Q ss_pred             HHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhc--CCHHHHHHHHhcCCCccccCCC
Q 005790          150 AARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARG--GNLKILKELLENCTDVLTYRDK  227 (677)
Q Consensus       150 A~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~--g~~eivk~LL~~ga~~~~~~d~  227 (677)
                      + ..++.+++++|+..+++.....    .                 ...+..+...  .+.+++++|+++|+++ +..+.
T Consensus       109 ~-~~~~~ei~~~Ll~~~~~~~~~~----~-----------------~~~~~~~~~~~~~~~~iv~~Ll~~gadi-n~~~~  165 (477)
T PHA02878        109 F-NNRNVEIFKIILTNRYKNIQTI----D-----------------LVYIDKKSKDDIIEAEITKLLLSYGADI-NMKDR  165 (477)
T ss_pred             H-HcCCHHHHHHHHhCcccCcccC----c-----------------HHHHhhccchhhHHHHHHHHHHHcCCCC-CccCC
Confidence            4 6688888888888765322110    0                 0011111111  2245888888888888 66666


Q ss_pred             C-CCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhc
Q 005790          228 Q-GSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSG  306 (677)
Q Consensus       228 ~-g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~  306 (677)
                      . |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.| ++                  
T Consensus       166 ~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-a~------------------  226 (477)
T PHA02878        166 HKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG-AS------------------  226 (477)
T ss_pred             CCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC-CC------------------
Confidence            6 888888888888888888888888888888888888888888888888888888877 33                  


Q ss_pred             CchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCC-CCCcHHHH
Q 005790          307 FQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDN-DGMTTLDL  385 (677)
Q Consensus       307 ~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~-~G~TpL~~  385 (677)
                                                    ++.+|..|.||||+|+..+.+.+++++|++ .|+++|.++. .|.||||+
T Consensus       227 ------------------------------in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~-~gadvn~~~~~~g~TpLh~  275 (477)
T PHA02878        227 ------------------------------TDARDKCGNTPLHISVGYCKDYDILKLLLE-HGVDVNAKSYILGLTALHS  275 (477)
T ss_pred             ------------------------------CCCCCCCCCCHHHHHHHhcCCHHHHHHHHH-cCCCCCccCCCCCCCHHHH
Confidence                                          444455666666666654336677777777 6777776654 56777777


Q ss_pred             HhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHH
Q 005790          386 LKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASHIK  425 (677)
Q Consensus       386 A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~  425 (677)
                      |+  ++.+    ++++|+++|||+|.+|..|.|||+.|+.
T Consensus       276 A~--~~~~----~v~~Ll~~gadin~~d~~g~TpL~~A~~  309 (477)
T PHA02878        276 SI--KSER----KLKLLLEYGADINSLNSYKLTPLSSAVK  309 (477)
T ss_pred             Hc--cCHH----HHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            73  2322    5666777777777777777777777665


No 21 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.3e-37  Score=348.53  Aligned_cols=287  Identities=24%  Similarity=0.260  Sum_probs=258.2

Q ss_pred             cCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHH-
Q 005790           36 NGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYT-  114 (677)
Q Consensus        36 ~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~-  114 (677)
                      ....++++++++.+-..+            ...+.+.+|||.|+..++.+++++|++    .|++++..+..|.||||+ 
T Consensus        12 ~~~~~~~~~~~~~~~~~~------------~~~~~~~t~L~~A~~~~~~~ivk~Ll~----~g~~~~~~~~~~~t~L~~~   75 (480)
T PHA03100         12 IIKVKNIKYIIMEDDLND------------YSYKKPVLPLYLAKEARNIDVVKILLD----NGADINSSTKNNSTPLHYL   75 (480)
T ss_pred             HHHHHHHHHHHhcCccch------------hhhcccchhhhhhhccCCHHHHHHHHH----cCCCCCCccccCcCHHHHH
Confidence            345688899998763332            246678999999999999999999999    999999999999999999 


Q ss_pred             ----HHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHH-hcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhh
Q 005790          115 ----AASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAA-RSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSV  189 (677)
Q Consensus       115 ----Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~-~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~  189 (677)
                          |+..|+.+++++|++.|+.. +..+..|.||||+|+. ..|+.+++++|+++|++++..+..              
T Consensus        76 ~~~~a~~~~~~~iv~~Ll~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~--------------  140 (480)
T PHA03100         76 SNIKYNLTDVKEIVKLLLEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSD--------------  140 (480)
T ss_pred             HHHHHHhhchHHHHHHHHHCCCCC-CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCC--------------
Confidence                99999999999999999855 8889999999999853 779999999999999998876554              


Q ss_pred             hhhhccchHHHHHHhcC--CHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCC-----
Q 005790          190 YKWEMMNRAVHAAARGG--NLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQG-----  262 (677)
Q Consensus       190 ~~~~~~~t~Lh~A~~~g--~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g-----  262 (677)
                           |.||||+|+..|  +.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++..+..|     
T Consensus       141 -----g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~  214 (480)
T PHA03100        141 -----GENLLHLYLESNKIDLKILKLLIDKGVDI-NAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTI  214 (480)
T ss_pred             -----CCcHHHHHHHcCCChHHHHHHHHHCCCCc-ccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHH
Confidence                 378999999999  999999999999998 7788899999999999999999999999999999999888     


Q ss_pred             -CcHHHHHHHcCC--HHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhc
Q 005790          263 -NTPLHIAAYRGQ--PAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINA  339 (677)
Q Consensus       263 -~tpL~~A~~~g~--~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~  339 (677)
                       .||||+|+..|+  .+++++|++.| ++++.+|..|.||||+|+..          ++.+++++|++.|     ++++.
T Consensus       215 ~~t~l~~a~~~~~~~~~iv~~Ll~~g-~din~~d~~g~TpL~~A~~~----------~~~~iv~~Ll~~g-----ad~n~  278 (480)
T PHA03100        215 FETPLHIAACYNEITLEVVNYLLSYG-VPINIKDVYGFTPLHYAVYN----------NNPEFVKYLLDLG-----ANPNL  278 (480)
T ss_pred             HHhHHHHHHHhCcCcHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHc----------CCHHHHHHHHHcC-----CCCCc
Confidence             899999999999  99999999998 78999999999999999995          4566777776655     56999


Q ss_pred             cCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCC
Q 005790          340 KNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDN  377 (677)
Q Consensus       340 ~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~  377 (677)
                      +|..|.||||+|+..+ +.+++++|++ .|++++..+.
T Consensus       279 ~d~~g~tpl~~A~~~~-~~~iv~~Ll~-~g~~i~~i~~  314 (480)
T PHA03100        279 VNKYGDTPLHIAILNN-NKEIFKLLLN-NGPSIKTIIE  314 (480)
T ss_pred             cCCCCCcHHHHHHHhC-CHHHHHHHHh-cCCCHHHHHH
Confidence            9999999999999988 9999999999 9999987653


No 22 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.2e-36  Score=340.88  Aligned_cols=284  Identities=19%  Similarity=0.203  Sum_probs=206.5

Q ss_pred             hchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHc--CCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHh-----c
Q 005790           81 CRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASA--GDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAAR-----S  153 (677)
Q Consensus        81 ~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~--g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~-----~  153 (677)
                      ....+++++|++    .|+++|.. ..|.||||.++..  ++.++|++|+++|++ ++..+ .+.||||.|+..     .
T Consensus        13 ~~~~~~v~~LL~----~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAd-vn~~~-~~~tpL~~a~~~~~~~~~   85 (494)
T PHA02989         13 TVDKNALEFLLR----TGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGAD-VNYKG-YIETPLCAVLRNREITSN   85 (494)
T ss_pred             cCcHHHHHHHHH----cCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCC-ccCCC-CCCCcHHHHHhccCcchh
Confidence            356777888887    78888877 5677877665544  367888888888874 44443 467888876421     2


Q ss_pred             CCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhc---CCHHHHHHHHhcCCCccccCCCCCC
Q 005790          154 KNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARG---GNLKILKELLENCTDVLTYRDKQGS  230 (677)
Q Consensus       154 g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~---g~~eivk~LL~~ga~~~~~~d~~g~  230 (677)
                      ++.+++++|+++|++++..+..|                   .||||.|+..   ++.++|++|+++|+++++..|..|.
T Consensus        86 ~~~~iv~~Ll~~Gadin~~d~~g-------------------~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~  146 (494)
T PHA02989         86 KIKKIVKLLLKFGADINLKTFNG-------------------VSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGY  146 (494)
T ss_pred             hHHHHHHHHHHCCCCCCCCCCCC-------------------CcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCC
Confidence            34678888888888887665443                   5788877654   5678888888888887556778888


Q ss_pred             cHHHHHHHh--CCHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcC----CHHHHHHHHHhCCCCccccCCCCCchhhhh
Q 005790          231 TILHAAAGR--GQVEVVKDLIASFDIINS-TDHQGNTPLHIAAYRG----QPAVVEALILASPSMISVKNTSGETFLHSA  303 (677)
Q Consensus       231 TpL~~A~~~--g~~eivk~Ll~~ga~in~-~d~~g~tpL~~A~~~g----~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A  303 (677)
                      ||||+|+..  ++.++|++|+++|++++. .+..|.||||+|+..+    +.+++++|++.| ++++..+..+.|+||.+
T Consensus       147 tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~G-a~vn~~~~~~~t~l~~~  225 (494)
T PHA02989        147 NLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKG-VNIETNNNGSESVLESF  225 (494)
T ss_pred             CHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCC-CCccccCCccccHHHHH
Confidence            888887654  577888888888888877 5677888888877654    788888888887 56777777788888877


Q ss_pred             hhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHH
Q 005790          304 VSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTL  383 (677)
Q Consensus       304 ~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL  383 (677)
                      +..+..    ......+++++|+.+      +++|.+|..|.||||+|+..+ +.++|++||+ .|+|+|.+|..|.|||
T Consensus       226 ~~~~~~----~~~~~~~il~~l~~~------advn~~d~~G~TpL~~Aa~~~-~~~~v~~LL~-~Gadin~~d~~G~TpL  293 (494)
T PHA02989        226 LDNNKI----LSKKEFKVLNFILKY------IKINKKDKKGFNPLLISAKVD-NYEAFNYLLK-LGDDIYNVSKDGDTVL  293 (494)
T ss_pred             HHhchh----hcccchHHHHHHHhC------CCCCCCCCCCCCHHHHHHHhc-CHHHHHHHHH-cCCCccccCCCCCCHH
Confidence            764321    113456677766543      347888888888888888877 8888888888 7888888888888888


Q ss_pred             HHHhhCCCCchHHHHHHHHHHcCC
Q 005790          384 DLLKQRPQSASSDILIRHLISAGG  407 (677)
Q Consensus       384 ~~A~~~~~~~~~~~lv~~Ll~~Ga  407 (677)
                      |+|+..++.+    +++.|++.+.
T Consensus       294 ~~A~~~~~~~----iv~~LL~~~p  313 (494)
T PHA02989        294 TYAIKHGNID----MLNRILQLKP  313 (494)
T ss_pred             HHHHHcCCHH----HHHHHHhcCC
Confidence            8888888766    5666666654


No 23 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.5e-36  Score=340.14  Aligned_cols=269  Identities=16%  Similarity=0.148  Sum_probs=229.7

Q ss_pred             cCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhc-CCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccc
Q 005790          118 AGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARS-KNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMN  196 (677)
Q Consensus       118 ~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~-g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (677)
                      ..+.++|++||++|++ ++.. ..|.|||+++++.. ++.++|++|+++||++|..+. +                   .
T Consensus        13 ~~~~~~v~~LL~~Gad-vN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~~-~-------------------~   70 (494)
T PHA02989         13 TVDKNALEFLLRTGFD-VNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGY-I-------------------E   70 (494)
T ss_pred             cCcHHHHHHHHHcCCC-cccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCCC-C-------------------C
Confidence            4789999999999985 5555 56889987765554 479999999999999997642 1                   4


Q ss_pred             hHHHHHHh------cCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHh---CCHHHHHHHHhcCCCC-CCCCCCCCcHH
Q 005790          197 RAVHAAAR------GGNLKILKELLENCTDVLTYRDKQGSTILHAAAGR---GQVEVVKDLIASFDII-NSTDHQGNTPL  266 (677)
Q Consensus       197 t~Lh~A~~------~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~---g~~eivk~Ll~~ga~i-n~~d~~g~tpL  266 (677)
                      ||||.|+.      .++.+++++|+++|+++ +.++..|.||||.|+..   ++.+++++|+++|+++ +..|..|.|||
T Consensus        71 tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpL  149 (494)
T PHA02989         71 TPLCAVLRNREITSNKIKKIVKLLLKFGADI-NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLL  149 (494)
T ss_pred             CcHHHHHhccCcchhhHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHH
Confidence            89999875      57899999999999999 88999999999988765   6799999999999999 88999999999


Q ss_pred             HHHHHc--CCHHHHHHHHHhCCCCccc-cCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCC
Q 005790          267 HIAAYR--GQPAVVEALILASPSMISV-KNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNND  343 (677)
Q Consensus       267 ~~A~~~--g~~~iv~~LL~~g~~~~~~-~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~  343 (677)
                      |+|+..  ++.+++++|+++| ++++. .+..|.||||+|+..+..      ..+.+++++|++.|     ++++.+|..
T Consensus       150 h~a~~~~~~~~~iv~~Ll~~G-adi~~~~~~~g~tpL~~a~~~~~~------~~~~~iv~~Ll~~G-----a~vn~~~~~  217 (494)
T PHA02989        150 HMYLESFSVKKDVIKILLSFG-VNLFEKTSLYGLTPMNIYLRNDID------VISIKVIKYLIKKG-----VNIETNNNG  217 (494)
T ss_pred             HHHHHhccCCHHHHHHHHHcC-CCccccccccCCChHHHHHhcccc------cccHHHHHHHHhCC-----CCccccCCc
Confidence            998764  6899999999999 56666 688999999999875432      46689999999999     348888889


Q ss_pred             CchHHHHHHhCC-----CcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCc
Q 005790          344 GRTALHMAITGN-----VHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARR  418 (677)
Q Consensus       344 G~TpLh~A~~~~-----~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T  418 (677)
                      |.|+||.++..+     ...+++++|+.  |+|+|.+|..|+||||+|+..++.+    ++++|+++|||+|.+|..|+|
T Consensus       218 ~~t~l~~~~~~~~~~~~~~~~il~~l~~--~advn~~d~~G~TpL~~Aa~~~~~~----~v~~LL~~Gadin~~d~~G~T  291 (494)
T PHA02989        218 SESVLESFLDNNKILSKKEFKVLNFILK--YIKINKKDKKGFNPLLISAKVDNYE----AFNYLLKLGDDIYNVSKDGDT  291 (494)
T ss_pred             cccHHHHHHHhchhhcccchHHHHHHHh--CCCCCCCCCCCCCHHHHHHHhcCHH----HHHHHHHcCCCccccCCCCCC
Confidence            999999877533     25788888775  6999999999999999999999977    689999999999999999999


Q ss_pred             hHHHHHHHh
Q 005790          419 AIASHIKML  427 (677)
Q Consensus       419 ~L~~al~~~  427 (677)
                      |||+|+...
T Consensus       292 pL~~A~~~~  300 (494)
T PHA02989        292 VLTYAIKHG  300 (494)
T ss_pred             HHHHHHHcC
Confidence            999998643


No 24 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.3e-36  Score=308.29  Aligned_cols=237  Identities=16%  Similarity=0.169  Sum_probs=197.2

Q ss_pred             cCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccch
Q 005790          118 AGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNR  197 (677)
Q Consensus       118 ~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t  197 (677)
                      .++.+++++|+++++.   ..|..|.||||+|+ ..|+.+++++|+++|++++..+                     +.|
T Consensus         9 ~~~~~~~~~Lis~~a~---~~D~~G~TpLh~Aa-~~g~~eiv~~Ll~~ga~~n~~d---------------------~~T   63 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF---KADVHGHSALYYAI-ADNNVRLVCTLLNAGALKNLLE---------------------NEF   63 (284)
T ss_pred             cCHHHHHHHHHhCCCC---CCCCCCCcHHHHHH-HcCCHHHHHHHHHCcCCCcCCC---------------------CCC
Confidence            4678888888888763   46788889998885 6688999999999888776432                     258


Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCC-cHHHHHHHcCCHH
Q 005790          198 AVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGN-TPLHIAAYRGQPA  276 (677)
Q Consensus       198 ~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~-tpL~~A~~~g~~~  276 (677)
                      |||+|+..|+.++|++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++..+..|+ ||||+|+..|+.+
T Consensus        64 pLh~Aa~~g~~eiV~lLL~~Gadv-n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~e  142 (284)
T PHA02791         64 PLHQAATLEDTKIVKILLFSGMDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVS  142 (284)
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHH
Confidence            999999999999999999999888 77888899999999999999999999999999888888774 8999999999999


Q ss_pred             HHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccC-CCCchHHHHHHhCC
Q 005790          277 VVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKN-NDGRTALHMAITGN  355 (677)
Q Consensus       277 iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d-~~G~TpLh~A~~~~  355 (677)
                      ++++|+++++..                                                   .| ..|.||||+|+..|
T Consensus       143 ivk~LL~~~~~~---------------------------------------------------~d~~~g~TpLh~Aa~~g  171 (284)
T PHA02791        143 IVSYFLSEIPST---------------------------------------------------FDLAILLSCIHITIKNG  171 (284)
T ss_pred             HHHHHHhcCCcc---------------------------------------------------cccccCccHHHHHHHcC
Confidence            999998775321                                                   11 24789999999988


Q ss_pred             CcHHHHHHHhhCCCCCccccCCCCCcH-HHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCC
Q 005790          356 VHLELVQLLMSAPSINVNVRDNDGMTT-LDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPG  434 (677)
Q Consensus       356 ~~~eiv~lLL~~~Gadin~~d~~G~Tp-L~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~  434 (677)
                       +.++|++||+ +|+|+|.+|..|.|| ||+|+..++.+    ++++|+++||++|.+|..| ++|.             
T Consensus       172 -~~eiv~lLL~-~gAd~n~~d~~g~t~~L~~Aa~~~~~e----~v~lLl~~Ga~in~~~~~~-~~l~-------------  231 (284)
T PHA02791        172 -HVDMMILLLD-YMTSTNTNNSLLFIPDIKLAIDNKDLE----MLQALFKYDINIYSVNLEN-VLLD-------------  231 (284)
T ss_pred             -CHHHHHHHHH-CCCCCCcccCCCCChHHHHHHHcCCHH----HHHHHHHCCCCCccCcccC-ccCC-------------
Confidence             9999999999 899999999999987 99999999987    6899999999999999854 6651             


Q ss_pred             CccchhhHHHHHHcCCCCCC
Q 005790          435 TSFRISDTEIFLYTGIDVSS  454 (677)
Q Consensus       435 ~~~~~~~v~~LL~~Gad~~~  454 (677)
                         ..|++++||++-++...
T Consensus       232 ---~~e~~~~ll~~~~~~~~  248 (284)
T PHA02791        232 ---DAEIAKMIIEKHVEYKS  248 (284)
T ss_pred             ---CHHHHHHHHHhhhhhcc
Confidence               17799999999988654


No 25 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=1.4e-36  Score=309.96  Aligned_cols=195  Identities=23%  Similarity=0.235  Sum_probs=171.5

Q ss_pred             ccCcHHHHHHHcCCHHHHHHHHH-hcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchh
Q 005790           25 WYASPIDWAAANGHYDLVRELLR-IDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLI  103 (677)
Q Consensus        25 ~g~TpL~~Aa~~G~~diV~~LL~-~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~  103 (677)
                      .|.|||.+||++||.++|++|++ .++++...    ...+.-...+.+.+||-.|+..|+.+|+++|++    .|+++|.
T Consensus        41 ~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~----GsV~FDge~IegappLWaAsaAGHl~vVk~L~~----~ga~VN~  112 (615)
T KOG0508|consen   41 NGGTPLLIAARNGHADVVEYLLEHCRASPEQG----GSVRFDGETIEGAPPLWAASAAGHLEVVKLLLR----RGASVND  112 (615)
T ss_pred             CCCCceeeehhcCcHHHHHHHHHHhcCCccCC----ceEEeCCcccCCCchhhHHhccCcHHHHHHHHH----hcCcccc
Confidence            47799999999999999999999 57766321    001111235678889999999999999999999    9999999


Q ss_pred             hcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhh
Q 005790          104 RAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHI  183 (677)
Q Consensus       104 ~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~  183 (677)
                      ......|||-.||..|++++|++|+++++ +....+..|.|.||+|| ..|+.+|+++|++.|+|+|..+..|       
T Consensus       113 tT~TNStPLraACfDG~leivKyLvE~ga-d~~IanrhGhTcLmIa~-ykGh~~I~qyLle~gADvn~ks~kG-------  183 (615)
T KOG0508|consen  113 TTRTNSTPLRAACFDGHLEIVKYLVEHGA-DPEIANRHGHTCLMIAC-YKGHVDIAQYLLEQGADVNAKSYKG-------  183 (615)
T ss_pred             ccccCCccHHHHHhcchhHHHHHHHHcCC-CCcccccCCCeeEEeee-ccCchHHHHHHHHhCCCcchhcccC-------
Confidence            99999999999999999999999999998 67778999999999996 6699999999999999999776664       


Q ss_pred             hcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHh
Q 005790          184 EEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIA  250 (677)
Q Consensus       184 ~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~  250 (677)
                                  +|+||.+++.|+++++++|+.+|+.+ . .|..|.|||..|+..|+.++|++|++
T Consensus       184 ------------NTALH~caEsG~vdivq~Ll~~ga~i-~-~d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  184 ------------NTALHDCAESGSVDIVQLLLKHGAKI-D-VDGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             ------------chHHHhhhhcccHHHHHHHHhCCcee-e-ecCCCCchHHHHhhhcchHHHHHHhc
Confidence                        89999999999999999999999987 3 67889999999999999999999995


No 26 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=8.1e-35  Score=319.46  Aligned_cols=242  Identities=20%  Similarity=0.238  Sum_probs=205.1

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcch
Q 005790          108 GGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIP  187 (677)
Q Consensus       108 G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~  187 (677)
                      .+++||.|+..|+.++|++|++.|+ +++..+..|.||||+|+ ..|+.+++++|+++|++++..+..            
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~-~~n~~~~~g~tpL~~A~-~~~~~~~v~~Ll~~ga~~~~~~~~------------   67 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGI-NPNFEIYDGISPIKLAM-KFRDSEAIKLLMKHGAIPDVKYPD------------   67 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCC-CCCccCCCCCCHHHHHH-HcCCHHHHHHHHhCCCCccccCCC------------
Confidence            4688999999999999999999987 45567778999999985 779999999999999988755332            


Q ss_pred             hhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 005790          188 SVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLH  267 (677)
Q Consensus       188 ~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~  267 (677)
                             +.||||.|+..|+.++|++|++.|+++.+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||
T Consensus        68 -------~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh  140 (413)
T PHA02875         68 -------IESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLH  140 (413)
T ss_pred             -------cccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence                   3689999999999999999999999876777788999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchH
Q 005790          268 IAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTA  347 (677)
Q Consensus       268 ~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~Tp  347 (677)
                      +|+..|+.+++++|+++|+ +                                                ++.+|..|.||
T Consensus       141 ~A~~~~~~~~v~~Ll~~g~-~------------------------------------------------~~~~d~~g~Tp  171 (413)
T PHA02875        141 LAVMMGDIKGIELLIDHKA-C------------------------------------------------LDIEDCCGCTP  171 (413)
T ss_pred             HHHHcCCHHHHHHHHhcCC-C------------------------------------------------CCCCCCCCCCH
Confidence            9999999999999998873 2                                                44556778888


Q ss_pred             HHHHHhCCCcHHHHHHHhhCCCCCccccCCCCC-cHHHHHhhCCCCchHHHHHHHHHHcCCCCCCC---cccCCchHHHH
Q 005790          348 LHMAITGNVHLELVQLLMSAPSINVNVRDNDGM-TTLDLLKQRPQSASSDILIRHLISAGGIFGCQ---DYSARRAIASH  423 (677)
Q Consensus       348 Lh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~-TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~---d~~G~T~L~~a  423 (677)
                      ||+|+..+ +.+++++|++ .|+++|..+..|. ||+|+|+..++.+    ++++|+++|+|+|..   +..+.||++..
T Consensus       172 L~~A~~~g-~~eiv~~Ll~-~ga~~n~~~~~~~~t~l~~A~~~~~~~----iv~~Ll~~gad~n~~~~~~~~~~t~l~~~  245 (413)
T PHA02875        172 LIIAMAKG-DIAICKMLLD-SGANIDYFGKNGCVAALCYAIENNKID----IVRLFIKRGADCNIMFMIEGEECTILDMI  245 (413)
T ss_pred             HHHHHHcC-CHHHHHHHHh-CCCCCCcCCCCCCchHHHHHHHcCCHH----HHHHHHHCCcCcchHhhcCCCchHHHHHH
Confidence            88888877 8888888888 8888888877764 7788888888876    688888888888765   56677888765


Q ss_pred             HH
Q 005790          424 IK  425 (677)
Q Consensus       424 l~  425 (677)
                      ..
T Consensus       246 ~~  247 (413)
T PHA02875        246 CN  247 (413)
T ss_pred             Hh
Confidence            54


No 27 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.5e-35  Score=325.78  Aligned_cols=272  Identities=20%  Similarity=0.192  Sum_probs=224.9

Q ss_pred             hhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchh
Q 005790          102 LIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEE  181 (677)
Q Consensus       102 ~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~  181 (677)
                      +..+..+.||||+||..|+.++|++|+++|+ +++..+..|.||||+|| ..|+.+++++|++.+.+.+..         
T Consensus        31 ~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~ga-dvn~~d~~g~TpLh~A~-~~g~~~~v~~Ll~~~~~~~~~---------   99 (477)
T PHA02878         31 TSASLIPFIPLHQAVEARNLDVVKSLLTRGH-NVNQPDHRDLTPLHIIC-KEPNKLGMKEMIRSINKCSVF---------   99 (477)
T ss_pred             CcccccCcchHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHH-HCccHhHHHHHHHHHhccccc---------
Confidence            3345578899999999999999999999997 66788999999999985 779999999999987644321         


Q ss_pred             hhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHh--CCHHHHHHHHhcCCCCCCCC
Q 005790          182 HIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGR--GQVEVVKDLIASFDIINSTD  259 (677)
Q Consensus       182 ~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~--g~~eivk~Ll~~ga~in~~d  259 (677)
                                  .+.++|+.|+..++.+++++|+..+.+.....+   ...+..+...  .+.+++++|+++|++++..+
T Consensus       100 ------------~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~  164 (477)
T PHA02878        100 ------------YTLVAIKDAFNNRNVEIFKIILTNRYKNIQTID---LVYIDKKSKDDIIEAEITKLLLSYGADINMKD  164 (477)
T ss_pred             ------------cchhhHHHHHHcCCHHHHHHHHhCcccCcccCc---HHHHhhccchhhHHHHHHHHHHHcCCCCCccC
Confidence                        125799999999999999999988654311111   1111111122  23569999999999999999


Q ss_pred             CC-CCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhh
Q 005790          260 HQ-GNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIIN  338 (677)
Q Consensus       260 ~~-g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in  338 (677)
                      .. |.||||+|+..|+.+++++|++.|+ +                                                ++
T Consensus       165 ~~~g~tpLh~A~~~~~~~iv~~Ll~~ga-d------------------------------------------------~n  195 (477)
T PHA02878        165 RHKGNTALHYATENKDQRLTELLLSYGA-N------------------------------------------------VN  195 (477)
T ss_pred             CCCCCCHHHHHHhCCCHHHHHHHHHCCC-C------------------------------------------------CC
Confidence            88 9999999999999999999998883 2                                                55


Q ss_pred             ccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhC-CCCchHHHHHHHHHHcCCCCCCCcc-cC
Q 005790          339 AKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQR-PQSASSDILIRHLISAGGIFGCQDY-SA  416 (677)
Q Consensus       339 ~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~-~~~~~~~~lv~~Ll~~Gadin~~d~-~G  416 (677)
                      .+|..|.||||+|+..+ +.+++++|++ .|+++|.+|..|.||||+|+.. ++.+    ++++|+++|+++|.++. .|
T Consensus       196 ~~d~~g~tpLh~A~~~~-~~~iv~~Ll~-~ga~in~~d~~g~TpLh~A~~~~~~~~----iv~~Ll~~gadvn~~~~~~g  269 (477)
T PHA02878        196 IPDKTNNSPLHHAVKHY-NKPIVHILLE-NGASTDARDKCGNTPLHISVGYCKDYD----ILKLLLEHGVDVNAKSYILG  269 (477)
T ss_pred             CcCCCCCCHHHHHHHhC-CHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhcCCHH----HHHHHHHcCCCCCccCCCCC
Confidence            56788999999999988 9999999999 9999999999999999999976 5555    79999999999999986 89


Q ss_pred             CchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCCCCCCCCCCCCCC
Q 005790          417 RRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSDGNANSGSGGMS  466 (677)
Q Consensus       417 ~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~~~~g~t~~~~~  466 (677)
                      .||||.|..            ..+++++|+++|||++..+..|.|+...+
T Consensus       270 ~TpLh~A~~------------~~~~v~~Ll~~gadin~~d~~g~TpL~~A  307 (477)
T PHA02878        270 LTALHSSIK------------SERKLKLLLEYGADINSLNSYKLTPLSSA  307 (477)
T ss_pred             CCHHHHHcc------------CHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence            999999832            15789999999999999999999876554


No 28 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.2e-34  Score=315.13  Aligned_cols=394  Identities=12%  Similarity=0.044  Sum_probs=282.6

Q ss_pred             cHHHHHHHcCCHHH--HHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHH-HHHHHhhhhcCCCCchhh
Q 005790           28 SPIDWAAANGHYDL--VRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVA-RKLFLECKSKNGKNSLIR  104 (677)
Q Consensus        28 TpL~~Aa~~G~~di--V~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v-~~lLl~~~~~~g~~~~~~  104 (677)
                      +.|+-.|..=+.+.  .+.||+.|+++.             ..|.+.|||+.-....+..+ +++++.    -+..++..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~-------------~~~~~~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   67 (631)
T PHA02792          5 KILYDSCKTFNIDACSAQSLIESGANPL-------------YEYDGETPLKAYVTKKNNNIKNDVVIL----LLSSVDYK   67 (631)
T ss_pred             hHHHhHhhccchhHHHHHHHHHcCCCcc-------------cccCCCccHHHHHhhhhhhHHHHHHHH----HHhCCCcC
Confidence            55666666655554  578999999974             25788899998876666332 234433    34456667


Q ss_pred             cCCCChHHHH-HHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCc-----
Q 005790          105 AGYGGWLLYT-AASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGE-----  178 (677)
Q Consensus       105 d~~G~t~L~~-Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~-----  178 (677)
                      +-+|.+++|+ |...|++|+|++|+++|+ +++..+..+.||+++|+...++.||+++|+++||++......|-.     
T Consensus        68 n~~~~~~~~~~~s~n~~lElvk~LI~~GA-dvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~  146 (631)
T PHA02792         68 NINDFDIFEYLCSDNIDIELLKLLISKGL-EINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQ  146 (631)
T ss_pred             ccCCccHHHHHHHhcccHHHHHHHHHcCC-CcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhh
Confidence            7778889975 667899999999999998 566677778999999987789999999999999997654443332     


Q ss_pred             --------chhh----hhcchhhhhhhccchHHHHHHhcC-------CHHHHHHHHhcCCCccccCCCCCCcHHHHHHHh
Q 005790          179 --------LEEH----IEEIPSVYKWEMMNRAVHAAARGG-------NLKILKELLENCTDVLTYRDKQGSTILHAAAGR  239 (677)
Q Consensus       179 --------~~~~----~~~~~~~~~~~~~~t~Lh~A~~~g-------~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~  239 (677)
                              +.+.    ......++++..|+||||+|+..+       +.|+++.||++|+++ +..|..|.||||+|+.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~-~~~d~~g~t~l~~~~~~  225 (631)
T PHA02792        147 ITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM-RYYTYREHTTLYYYVDK  225 (631)
T ss_pred             cccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc-CccCCCCChHHHHHHHc
Confidence                    1111    011122467778999999999999       899999999999999 77888999999999999


Q ss_pred             C--CHHHHHHHHhcCCCCCCCCCCCCcHHHHHH--Hc----C--CHHHHHHHHHhCCC-C-ccccCCC-C-Cchhhhhhh
Q 005790          240 G--QVEVVKDLIASFDIINSTDHQGNTPLHIAA--YR----G--QPAVVEALILASPS-M-ISVKNTS-G-ETFLHSAVS  305 (677)
Q Consensus       240 g--~~eivk~Ll~~ga~in~~d~~g~tpL~~A~--~~----g--~~~iv~~LL~~g~~-~-~~~~~~~-g-~tpLh~A~~  305 (677)
                      .  ..|++++|++.-.+.    .+-...|+.-.  +.    +  +..+|..||+.+.. + ....... . .+..-.-.+
T Consensus       226 ~~i~~ei~~~L~~~~~~~----~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~  301 (631)
T PHA02792        226 CDIKREIFDALFDSNYSG----NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKR  301 (631)
T ss_pred             ccchHHHHHHHHhccccc----cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHH
Confidence            9  889999999841111    11122222221  22    1  24489999886531 1 1111111 1 111111111


Q ss_pred             cCchHHHHHh--------hHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCC
Q 005790          306 GFQTYAFRRL--------DRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDN  377 (677)
Q Consensus       306 ~~~~~~~~~L--------~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~  377 (677)
                      ..  ..++.+        .-..+++++|++.|.       +........+++.|+..+ +.++|++|++ +|||+|.+|.
T Consensus       302 ~~--~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga-------~~~r~~~~n~~~~Aa~~g-n~eIVelLIs-~GADIN~kD~  370 (631)
T PHA02792        302 YT--DSIQDLLSEYVSYHTVYINVIKCMIDEGA-------TLYRFKHINKYFQKFDNR-DPKVVEYILK-NGNVVVEDDD  370 (631)
T ss_pred             Hh--HHHHHHHHHHHhcCCccHHHHHHHHHCCC-------ccccCCcchHHHHHHHcC-CHHHHHHHHH-cCCchhhhcC
Confidence            11  222222        346889999999883       221233566799998878 9999999999 9999999998


Q ss_pred             CC--CcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCCC
Q 005790          378 DG--MTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSD  455 (677)
Q Consensus       378 ~G--~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~  455 (677)
                      +|  .||||+|+.....+ +..++++|+++|||+|.+|..|+||||+|+....          .+++++|+++|||++.+
T Consensus       371 ~g~~~TpLh~A~~n~~~~-v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n----------~eivelLLs~GADIN~k  439 (631)
T PHA02792        371 NIINIMPLFPTLSIHESD-VLSILKLCKPYIDDINKIDKHGRSILYYCIESHS----------VSLVEWLIDNGADINIT  439 (631)
T ss_pred             CCCChhHHHHHHHhccHh-HHHHHHHHHhcCCccccccccCcchHHHHHHcCC----------HHHHHHHHHCCCCCCCc
Confidence            75  69999977766543 4457899999999999999999999999987433          78999999999999999


Q ss_pred             CCCCCCCCCCC
Q 005790          456 GNANSGSGGMS  466 (677)
Q Consensus       456 ~~~g~t~~~~~  466 (677)
                      +..|.|+...+
T Consensus       440 D~~G~TpL~~A  450 (631)
T PHA02792        440 TKYGSTCIGIC  450 (631)
T ss_pred             CCCCCCHHHHH
Confidence            99999877654


No 29 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.2e-35  Score=325.27  Aligned_cols=282  Identities=16%  Similarity=0.148  Sum_probs=153.0

Q ss_pred             HHHHHHHHHcCCCccccCCCCCCCHHH-HHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHH
Q 005790          121 LGFVKQLLDKNPLLVFGEGEYGVTDIF-YAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAV  199 (677)
Q Consensus       121 ~eivk~LL~~g~~~~~~~~~~g~tpL~-~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L  199 (677)
                      .++|+.|++.+. +...  ..+.|+++ +.....++.++|++|+++|++++..+..|                   .|||
T Consensus        18 ~~~v~~ll~~~~-~~~~--~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g-------------------~TpL   75 (489)
T PHA02798         18 LSTVKLLIKSCN-PNEI--VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEY-------------------STPL   75 (489)
T ss_pred             HHHHHHHHhcCC-hhhh--cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCC-------------------CChH
Confidence            455666665432 1111  23444444 22222335566666666666655444332                   4566


Q ss_pred             HHHHhc-----CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC---CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 005790          200 HAAARG-----GNLKILKELLENCTDVLTYRDKQGSTILHAAAGRG---QVEVVKDLIASFDIINSTDHQGNTPLHIAAY  271 (677)
Q Consensus       200 h~A~~~-----g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g---~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~  271 (677)
                      |.|+..     +..+++++|+++|+++ +..|..|.||||+|+..+   +.+++++|+++|++++..|..|.||||+|++
T Consensus        76 ~~~~~n~~~~~~~~~iv~~Ll~~Gadi-N~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~  154 (489)
T PHA02798         76 CTILSNIKDYKHMLDIVKILIENGADI-NKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQ  154 (489)
T ss_pred             HHHHHhHHhHHhHHHHHHHHHHCCCCC-CCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHH
Confidence            655542     4456666666666665 555666666666666553   4566666666666666666666666666666


Q ss_pred             cCC---HHHHHHHHHhCCCCccccC-CCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchH
Q 005790          272 RGQ---PAVVEALILASPSMISVKN-TSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTA  347 (677)
Q Consensus       272 ~g~---~~iv~~LL~~g~~~~~~~~-~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~Tp  347 (677)
                      .++   .+++++|++.| ++++..+ ..|.||||.++..+..      ..+.+++++|++.|     ++++..+..|.|+
T Consensus       155 ~~~~~~~~vv~~Ll~~g-adin~~~~~~~~t~Lh~~~~~~~~------~~~~~ivk~Li~~G-----a~i~~~~~~~~~~  222 (489)
T PHA02798        155 SNHHIDIEIIKLLLEKG-VDINTHNNKEKYDTLHCYFKYNID------RIDADILKLFVDNG-----FIINKENKSHKKK  222 (489)
T ss_pred             cCCcchHHHHHHHHHhC-CCcccccCcCCCcHHHHHHHhccc------cCCHHHHHHHHHCC-----CCcccCCccccch
Confidence            555   56666666665 4444442 3455666655542100      12345555555544     3355555555555


Q ss_pred             HHH-------HHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchH
Q 005790          348 LHM-------AITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAI  420 (677)
Q Consensus       348 Lh~-------A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L  420 (677)
                      ++.       +...+ +.+++++|+.  |+|+|.+|..|+||||+|+..++.+    ++++|+++|||+|.+|..|+|||
T Consensus       223 ~~~~l~~l~~~~~~~-~~~i~~~l~~--~~dvN~~d~~G~TPL~~A~~~~~~~----~v~~LL~~GAdin~~d~~G~TpL  295 (489)
T PHA02798        223 FMEYLNSLLYDNKRF-KKNILDFIFS--YIDINQVDELGFNPLYYSVSHNNRK----IFEYLLQLGGDINIITELGNTCL  295 (489)
T ss_pred             HHHHHHHHHhhcccc-hHHHHHHHHh--cCCCCCcCcCCccHHHHHHHcCcHH----HHHHHHHcCCcccccCCCCCcHH
Confidence            541       22222 5556655554  4666666666666666666666654    46666666666666666666666


Q ss_pred             HHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCC
Q 005790          421 ASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSS  454 (677)
Q Consensus       421 ~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~  454 (677)
                      +.|+....          .++++.||++|++++.
T Consensus       296 ~~A~~~~~----------~~iv~~lL~~~~~~~~  319 (489)
T PHA02798        296 FTAFENES----------KFIFNSILNKKPNKNT  319 (489)
T ss_pred             HHHHHcCc----------HHHHHHHHccCCCHHH
Confidence            66655322          4566666666666653


No 30 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.1e-34  Score=312.53  Aligned_cols=242  Identities=21%  Similarity=0.201  Sum_probs=220.9

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhc
Q 005790           26 YASPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRA  105 (677)
Q Consensus        26 g~TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d  105 (677)
                      .+++||.|+..|+.++|++|+++|++++..            ...+.||||.|+..++.+++++|++    .|++++..+
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~------------~~~g~tpL~~A~~~~~~~~v~~Ll~----~ga~~~~~~   65 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFE------------IYDGISPIKLAMKFRDSEAIKLLMK----HGAIPDVKY   65 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCcc------------CCCCCCHHHHHHHcCCHHHHHHHHh----CCCCccccC
Confidence            358999999999999999999999998753            4578999999999999999999999    899999999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhc
Q 005790          106 GYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEE  185 (677)
Q Consensus       106 ~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~  185 (677)
                      ..+.||||+|+..|+.++|++|++.++......+..|.||||+|| ..|+.+++++|+++|++++..+..          
T Consensus        66 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~-~~~~~~iv~~Ll~~gad~~~~~~~----------  134 (413)
T PHA02875         66 PDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLAT-ILKKLDIMKLLIARGADPDIPNTD----------  134 (413)
T ss_pred             CCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHH-HhCCHHHHHHHHhCCCCCCCCCCC----------
Confidence            999999999999999999999999998776777788999999986 679999999999999999876544          


Q ss_pred             chhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCC-Cc
Q 005790          186 IPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQG-NT  264 (677)
Q Consensus       186 ~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g-~t  264 (677)
                               |.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|++++..+..| .|
T Consensus       135 ---------g~tpLh~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t  204 (413)
T PHA02875        135 ---------KFSPLHLAVMMGDIKGIELLIDHKACL-DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVA  204 (413)
T ss_pred             ---------CCCHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCch
Confidence                     379999999999999999999999998 7899999999999999999999999999999999998887 48


Q ss_pred             HHHHHHHcCCHHHHHHHHHhCCCCcccc---CCCCCchhhhhhh
Q 005790          265 PLHIAAYRGQPAVVEALILASPSMISVK---NTSGETFLHSAVS  305 (677)
Q Consensus       265 pL~~A~~~g~~~iv~~LL~~g~~~~~~~---~~~g~tpLh~A~~  305 (677)
                      |+|+|+..|+.+++++|+++| ++++..   +..+.|||+.++.
T Consensus       205 ~l~~A~~~~~~~iv~~Ll~~g-ad~n~~~~~~~~~~t~l~~~~~  247 (413)
T PHA02875        205 ALCYAIENNKIDIVRLFIKRG-ADCNIMFMIEGEECTILDMICN  247 (413)
T ss_pred             HHHHHHHcCCHHHHHHHHHCC-cCcchHhhcCCCchHHHHHHHh
Confidence            999999999999999999999 556654   6678899998764


No 31 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=1e-33  Score=290.66  Aligned_cols=234  Identities=16%  Similarity=0.100  Sum_probs=205.7

Q ss_pred             cCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHH
Q 005790           36 NGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTA  115 (677)
Q Consensus        36 ~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~A  115 (677)
                      .++.+++++|+++|++.              .+..+.||||+|+..++.+++++|++    .|++++..+  |.||||+|
T Consensus         9 ~~~~~~~~~Lis~~a~~--------------~D~~G~TpLh~Aa~~g~~eiv~~Ll~----~ga~~n~~d--~~TpLh~A   68 (284)
T PHA02791          9 WKSKQLKSFLSSKDAFK--------------ADVHGHSALYYAIADNNVRLVCTLLN----AGALKNLLE--NEFPLHQA   68 (284)
T ss_pred             cCHHHHHHHHHhCCCCC--------------CCCCCCcHHHHHHHcCCHHHHHHHHH----CcCCCcCCC--CCCHHHHH
Confidence            46899999999999863              45679999999999999999999999    888888765  68999999


Q ss_pred             HHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhcc
Q 005790          116 ASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMM  195 (677)
Q Consensus       116 a~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (677)
                      +..|+.++|++|++.|+ +++..+..|.||||+|| ..|+.+++++|+++|++++..+..+.                  
T Consensus        69 a~~g~~eiV~lLL~~Ga-dvn~~d~~G~TpLh~Aa-~~g~~eivk~Ll~~gadin~~~~~g~------------------  128 (284)
T PHA02791         69 ATLEDTKIVKILLFSGM-DDSQFDDKGNTALYYAV-DSGNMQTVKLFVKKNWRLMFYGKTGW------------------  128 (284)
T ss_pred             HHCCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHH-HcCCHHHHHHHHHCCCCcCccCCCCC------------------
Confidence            99999999999999997 56778899999999996 77999999999999999886654431                  


Q ss_pred             chHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcH-HHHHHHcCC
Q 005790          196 NRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTP-LHIAAYRGQ  274 (677)
Q Consensus       196 ~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tp-L~~A~~~g~  274 (677)
                      .||||+|+..|+.++|++|++++++..+  ...|.||||+|+..|+.+++++|+++|++++..|..|.|| ||+|+..|+
T Consensus       129 ~TpL~~Aa~~g~~eivk~LL~~~~~~~d--~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~  206 (284)
T PHA02791        129 KTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKD  206 (284)
T ss_pred             cHHHHHHHHcCCHHHHHHHHhcCCcccc--cccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCC
Confidence            4899999999999999999999876422  1358999999999999999999999999999999999987 999999999


Q ss_pred             HHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHccc
Q 005790          275 PAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQ  329 (677)
Q Consensus       275 ~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~  329 (677)
                      .+++++|+++| ++++.+|..+ ++|                ++.|++++|+++.
T Consensus       207 ~e~v~lLl~~G-a~in~~~~~~-~~l----------------~~~e~~~~ll~~~  243 (284)
T PHA02791        207 LEMLQALFKYD-INIYSVNLEN-VLL----------------DDAEIAKMIIEKH  243 (284)
T ss_pred             HHHHHHHHHCC-CCCccCcccC-ccC----------------CCHHHHHHHHHhh
Confidence            99999999999 7789888854 554                4567888998876


No 32 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=8.9e-34  Score=317.33  Aligned_cols=288  Identities=16%  Similarity=0.150  Sum_probs=236.6

Q ss_pred             HHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHH--cCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHh----cCCHH
Q 005790           84 KVARKLFLECKSKNGKNSLIRAGYGGWLLYTAAS--AGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAAR----SKNCD  157 (677)
Q Consensus        84 ~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~--~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~----~g~~e  157 (677)
                      .+++++|++    .+ +++.. ..|.|+++.+..  .++.++|++|+++|+ +++..+..|.||||+++..    .++.+
T Consensus        18 ~~~v~~ll~----~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Ga-dvn~~d~~g~TpL~~~~~n~~~~~~~~~   90 (489)
T PHA02798         18 LSTVKLLIK----SC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGA-NVNGLDNEYSTPLCTILSNIKDYKHMLD   90 (489)
T ss_pred             HHHHHHHHh----cC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCC-CCCCCCCCCCChHHHHHHhHHhHHhHHH
Confidence            467777876    43 34433 346677664444  458999999999998 6778889999999998532    36789


Q ss_pred             HHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcC---CHHHHHHHHhcCCCccccCCCCCCcHHH
Q 005790          158 VFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGG---NLKILKELLENCTDVLTYRDKQGSTILH  234 (677)
Q Consensus       158 vv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g---~~eivk~LL~~ga~~~~~~d~~g~TpL~  234 (677)
                      ++++|+++|+++|..+..|                   .||||+|+..+   +.+++++|+++|+++ +..|..|.||||
T Consensus        91 iv~~Ll~~GadiN~~d~~G-------------------~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~tpL~  150 (489)
T PHA02798         91 IVKILIENGADINKKNSDG-------------------ETPLYCLLSNGYINNLEILLFMIENGADT-TLLDKDGFTMLQ  150 (489)
T ss_pred             HHHHHHHCCCCCCCCCCCc-------------------CcHHHHHHHcCCcChHHHHHHHHHcCCCc-cccCCCCCcHHH
Confidence            9999999999999876654                   79999999876   789999999999999 889999999999


Q ss_pred             HHHHhCC---HHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHc----CCHHHHHHHHHhCCCCccccCCCCCchhhhhhhc
Q 005790          235 AAAGRGQ---VEVVKDLIASFDIINSTD-HQGNTPLHIAAYR----GQPAVVEALILASPSMISVKNTSGETFLHSAVSG  306 (677)
Q Consensus       235 ~A~~~g~---~eivk~Ll~~ga~in~~d-~~g~tpL~~A~~~----g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~  306 (677)
                      +|+..++   .+++++|+++|++++..+ ..|.||||.++..    ++.+++++|+++| ++++..+..|.++++.....
T Consensus       151 ~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~G-a~i~~~~~~~~~~~~~~l~~  229 (489)
T PHA02798        151 VYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNG-FIINKENKSHKKKFMEYLNS  229 (489)
T ss_pred             HHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCC-CCcccCCccccchHHHHHHH
Confidence            9999998   999999999999999885 5789999998764    4899999999999 67888888888887722110


Q ss_pred             CchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHH
Q 005790          307 FQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLL  386 (677)
Q Consensus       307 ~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A  386 (677)
                      -   .........+++.+|+.+      +++|.+|..|.||||+|+..+ +.+++++||+ .|||+|.+|..|+||||+|
T Consensus       230 l---~~~~~~~~~~i~~~l~~~------~dvN~~d~~G~TPL~~A~~~~-~~~~v~~LL~-~GAdin~~d~~G~TpL~~A  298 (489)
T PHA02798        230 L---LYDNKRFKKNILDFIFSY------IDINQVDELGFNPLYYSVSHN-NRKIFEYLLQ-LGGDINIITELGNTCLFTA  298 (489)
T ss_pred             H---HhhcccchHHHHHHHHhc------CCCCCcCcCCccHHHHHHHcC-cHHHHHHHHH-cCCcccccCCCCCcHHHHH
Confidence            0   000013446677776653      459999999999999999988 9999999999 9999999999999999999


Q ss_pred             hhCCCCchHHHHHHHHHHcCCCCCCCcc
Q 005790          387 KQRPQSASSDILIRHLISAGGIFGCQDY  414 (677)
Q Consensus       387 ~~~~~~~~~~~lv~~Ll~~Gadin~~d~  414 (677)
                      +..++.+    +++.|+++|++++....
T Consensus       299 ~~~~~~~----iv~~lL~~~~~~~~i~~  322 (489)
T PHA02798        299 FENESKF----IFNSILNKKPNKNTISY  322 (489)
T ss_pred             HHcCcHH----HHHHHHccCCCHHHHHH
Confidence            9999977    78899999999886543


No 33 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=8.7e-34  Score=289.67  Aligned_cols=219  Identities=26%  Similarity=0.302  Sum_probs=186.1

Q ss_pred             HHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCc--------hh
Q 005790           32 WAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNS--------LI  103 (677)
Q Consensus        32 ~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~--------~~  103 (677)
                      -|++.|.+..+..|+-...+..       -...+..+.++.+||..|+++|+..++++|++.   .++++        +-
T Consensus        10 naa~~g~l~~l~~ll~~~s~~e-------i~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~---~~a~~e~~GsV~FDg   79 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEE-------IISLIGEVQNGGTPLLIAARNGHADVVEYLLEH---CRASPEQGGSVRFDG   79 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHH-------HHHHhccccCCCCceeeehhcCcHHHHHHHHHH---hcCCccCCceEEeCC
Confidence            6888888888888876543321       123345667889999999999999999999982   23333        22


Q ss_pred             hcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhh
Q 005790          104 RAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHI  183 (677)
Q Consensus       104 ~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~  183 (677)
                      ....|-+||..|+..||+++|+.|+++|+ .+|......-|||--|| .-|++++|++|+++|+||+..+..|       
T Consensus        80 e~IegappLWaAsaAGHl~vVk~L~~~ga-~VN~tT~TNStPLraAC-fDG~leivKyLvE~gad~~IanrhG-------  150 (615)
T KOG0508|consen   80 ETIEGAPPLWAASAAGHLEVVKLLLRRGA-SVNDTTRTNSTPLRAAC-FDGHLEIVKYLVEHGADPEIANRHG-------  150 (615)
T ss_pred             cccCCCchhhHHhccCcHHHHHHHHHhcC-ccccccccCCccHHHHH-hcchhHHHHHHHHcCCCCcccccCC-------
Confidence            33468899999999999999999999996 56666666779988775 7799999999999999999887765       


Q ss_pred             hcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCC
Q 005790          184 EEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGN  263 (677)
Q Consensus       184 ~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~  263 (677)
                                  .|.||+|+..||.+|+++|++.|+|+ +.++..|.|+||.|++.|+++++++|+.+|+.++. |..|.
T Consensus       151 ------------hTcLmIa~ykGh~~I~qyLle~gADv-n~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-d~~Gm  216 (615)
T KOG0508|consen  151 ------------HTCLMIACYKGHVDIAQYLLEQGADV-NAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-DGHGM  216 (615)
T ss_pred             ------------CeeEEeeeccCchHHHHHHHHhCCCc-chhcccCchHHHhhhhcccHHHHHHHHhCCceeee-cCCCC
Confidence                        68999999999999999999999999 88999999999999999999999999999998864 66699


Q ss_pred             cHHHHHHHcCCHHHHHHHHH
Q 005790          264 TPLHIAAYRGQPAVVEALIL  283 (677)
Q Consensus       264 tpL~~A~~~g~~~iv~~LL~  283 (677)
                      |||..|+..|+.++|++|++
T Consensus       217 tPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  217 TPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             chHHHHhhhcchHHHHHHhc
Confidence            99999999999999999994


No 34 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=1.9e-33  Score=254.28  Aligned_cols=178  Identities=31%  Similarity=0.344  Sum_probs=165.8

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhc-CCCcccccccCCcchhhh
Q 005790          105 AGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDF-AVSPRFLTAKGGELEEHI  183 (677)
Q Consensus       105 d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~-Gad~~~~~~~~~~~~~~~  183 (677)
                      |.+|+|||||||+.|+.++|.+|+..-...++..|..||||||+|| ..|+.++|+-|+.+ |+|+|..+..|       
T Consensus        35 dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~-s~g~~evVk~Ll~r~~advna~tn~G-------  106 (226)
T KOG4412|consen   35 DQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAA-SNGNDEVVKELLNRSGADVNATTNGG-------  106 (226)
T ss_pred             cccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhh-hcCcHHHHHHHhcCCCCCcceecCCC-------
Confidence            4489999999999999999999997655677888999999999996 77999999999999 99999887765       


Q ss_pred             hcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCC
Q 005790          184 EEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGN  263 (677)
Q Consensus       184 ~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~  263 (677)
                                  +|+||+|+..|.+||+++|+++|+.+ +.+|..|.||||.|+.-|.++++++|+..|+.+|..|..|+
T Consensus       107 ------------~T~LHyAagK~r~eIaqlLle~ga~i-~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~  173 (226)
T KOG4412|consen  107 ------------QTCLHYAAGKGRLEIAQLLLEKGALI-RIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGF  173 (226)
T ss_pred             ------------cceehhhhcCChhhHHHHHHhcCCCC-cccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCc
Confidence                        79999999999999999999999998 89999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhh
Q 005790          264 TPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS  305 (677)
Q Consensus       264 tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~  305 (677)
                      ||||.|...|+.++..+|+++| +++...|+.| ||+..|+-
T Consensus       174 TpL~~al~e~~~d~a~lLV~~g-Ad~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  174 TPLHHALAEGHPDVAVLLVRAG-ADTDREDKEG-TALRIACN  213 (226)
T ss_pred             cHHHHHHhccCchHHHHHHHhc-cceeeccccC-chHHHHHH
Confidence            9999999999999999999999 8899999988 99888874


No 35 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=2.2e-33  Score=253.80  Aligned_cols=206  Identities=27%  Similarity=0.342  Sum_probs=185.6

Q ss_pred             chHHHHHHhcCCHHHHHHHHhcCCCccccCC-CCCCcHHHHHHHhCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHHcC
Q 005790          196 NRAVHAAARGGNLKILKELLENCTDVLTYRD-KQGSTILHAAAGRGQVEVVKDLI-ASFDIINSTDHQGNTPLHIAAYRG  273 (677)
Q Consensus       196 ~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d-~~g~TpL~~A~~~g~~eivk~Ll-~~ga~in~~d~~g~tpL~~A~~~g  273 (677)
                      .++.+.++......-|+.|++....-.+.++ .+|+|||||||..|+.++|.+|+ +.+..+|.+|..|+||||+|+..|
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g   83 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNG   83 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcC
Confidence            4678888888888889999998884445555 49999999999999999999999 678889999999999999999999


Q ss_pred             CHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHh
Q 005790          274 QPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAIT  353 (677)
Q Consensus       274 ~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~  353 (677)
                      +.++|+.|+.+..++++..+..|+|+||||+.          .+..++..+|++++     +.++.+|..|.||||.|+.
T Consensus        84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAag----------K~r~eIaqlLle~g-----a~i~~kD~~~qtplHRAAa  148 (226)
T KOG4412|consen   84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAG----------KGRLEIAQLLLEKG-----ALIRIKDKQGQTPLHRAAA  148 (226)
T ss_pred             cHHHHHHHhcCCCCCcceecCCCcceehhhhc----------CChhhHHHHHHhcC-----CCCcccccccCchhHHHHh
Confidence            99999999999668999999999999999999          67788888888877     5599999999999999999


Q ss_pred             CCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHH
Q 005790          354 GNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASH  423 (677)
Q Consensus       354 ~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~a  423 (677)
                      -| .++++++|+. .|+.+|.+|..|+||||.|...++.+    ...+|+++||+++..|+.| ||+-.+
T Consensus       149 vG-klkvie~Li~-~~a~~n~qDk~G~TpL~~al~e~~~d----~a~lLV~~gAd~~~edke~-t~~~~a  211 (226)
T KOG4412|consen  149 VG-KLKVIEYLIS-QGAPLNTQDKYGFTPLHHALAEGHPD----VAVLLVRAGADTDREDKEG-TALRIA  211 (226)
T ss_pred             cc-chhhHHHHHh-cCCCCCcccccCccHHHHHHhccCch----HHHHHHHhccceeeccccC-chHHHH
Confidence            88 9999999999 99999999999999999998888888    5778889999999999988 996544


No 36 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.1e-31  Score=293.02  Aligned_cols=365  Identities=13%  Similarity=0.091  Sum_probs=264.9

Q ss_pred             cccCcHHHHHHHcCCH-HHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHH-HhhchHHHHHHHHhhhhcCCCCc
Q 005790           24 WWYASPIDWAAANGHY-DLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDV-AKCRSKVARKLFLECKSKNGKNS  101 (677)
Q Consensus        24 ~~g~TpL~~Aa~~G~~-diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A-~~~~~~~v~~lLl~~~~~~g~~~  101 (677)
                      |.+.||||.=....|. .=++.++..|-.++.            ...++.+++++. ..+++.+++++|+.    +|+|+
T Consensus        35 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~n~~~~~~~~~~~s~n~~lElvk~LI~----~GAdv   98 (631)
T PHA02792         35 YDGETPLKAYVTKKNNNIKNDVVILLLSSVDY------------KNINDFDIFEYLCSDNIDIELLKLLIS----KGLEI   98 (631)
T ss_pred             cCCCccHHHHHhhhhhhHHHHHHHHHHhCCCc------------CccCCccHHHHHHHhcccHHHHHHHHH----cCCCc
Confidence            5577999988665552 223344443333331            233466677665 45778899999999    89999


Q ss_pred             hhhcCCCChHHHHHHH-cCCHHHHHHHHHcCCCc-----------------------------------cccCCCCCCCH
Q 005790          102 LIRAGYGGWLLYTAAS-AGDLGFVKQLLDKNPLL-----------------------------------VFGEGEYGVTD  145 (677)
Q Consensus       102 ~~~d~~G~t~L~~Aa~-~g~~eivk~LL~~g~~~-----------------------------------~~~~~~~g~tp  145 (677)
                      +.++..|.+|||+|+. .+++|+|++||++|++.                                   ++..+..|.||
T Consensus        99 N~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~  178 (631)
T PHA02792         99 NSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTV  178 (631)
T ss_pred             ccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCch
Confidence            9999988999999966 69999999999999741                                   12345669999


Q ss_pred             HHHHHHhcC-------CHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcC--CHHHHHHHHh
Q 005790          146 IFYAAARSK-------NCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGG--NLKILKELLE  216 (677)
Q Consensus       146 L~~AA~~~g-------~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g--~~eivk~LL~  216 (677)
                      ||+++ .++       +.|++++|+++|++++..+..                   |.||||+|+...  ..|++++|++
T Consensus       179 L~~~i-~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~-------------------g~t~l~~~~~~~~i~~ei~~~L~~  238 (631)
T PHA02792        179 LYYYI-ITRSQDGYATSLDVINYLISHEKEMRYYTYR-------------------EHTTLYYYVDKCDIKREIFDALFD  238 (631)
T ss_pred             HHHHH-hhCCcccccCCHHHHHHHHhCCCCcCccCCC-------------------CChHHHHHHHcccchHHHHHHHHh
Confidence            99996 556       799999999999999877665                   379999999999  8999999998


Q ss_pred             cCCCccccCCCCCCcHHHHHH--Hh----C--CHHHHHHHHhcCCC--C----CCCCCC-------------CCcHHHHH
Q 005790          217 NCTDVLTYRDKQGSTILHAAA--GR----G--QVEVVKDLIASFDI--I----NSTDHQ-------------GNTPLHIA  269 (677)
Q Consensus       217 ~ga~~~~~~d~~g~TpL~~A~--~~----g--~~eivk~Ll~~ga~--i----n~~d~~-------------g~tpL~~A  269 (677)
                      . +..  ..+  -...|+.-.  ..    .  +..+|..|++.+..  +    ...+..             -+-.||.-
T Consensus       239 ~-~~~--~~~--~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Y  313 (631)
T PHA02792        239 S-NYS--GNE--LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEY  313 (631)
T ss_pred             c-ccc--ccc--hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHH
Confidence            4 221  111  123333222  11    1  24599999987662  1    111111             11345555


Q ss_pred             HHcC--CHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCC--c
Q 005790          270 AYRG--QPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDG--R  345 (677)
Q Consensus       270 ~~~g--~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G--~  345 (677)
                      ...+  +.+++++|+++|.. ..  .......++.|+.          .+..+++++|+++|     ++++.+|..|  .
T Consensus       314 l~~~~v~ieiIK~LId~Ga~-~~--r~~~~n~~~~Aa~----------~gn~eIVelLIs~G-----ADIN~kD~~g~~~  375 (631)
T PHA02792        314 VSYHTVYINVIKCMIDEGAT-LY--RFKHINKYFQKFD----------NRDPKVVEYILKNG-----NVVVEDDDNIINI  375 (631)
T ss_pred             HhcCCccHHHHHHHHHCCCc-cc--cCCcchHHHHHHH----------cCCHHHHHHHHHcC-----CchhhhcCCCCCh
Confidence            6666  78999999999954 32  2234556777877          56678888888776     5588888775  6


Q ss_pred             hHHHHHHhCCCcH---HHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHH
Q 005790          346 TALHMAITGNVHL---ELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIAS  422 (677)
Q Consensus       346 TpLh~A~~~~~~~---eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~  422 (677)
                      ||||+|+..+ ..   +++++|++ +|+|+|.+|..|.||||+|+..++.+    ++++|+++|+++|.+|..|+|||+.
T Consensus       376 TpLh~A~~n~-~~~v~~IlklLIs-~GADIN~kD~~G~TPLh~Aa~~~n~e----ivelLLs~GADIN~kD~~G~TpL~~  449 (631)
T PHA02792        376 MPLFPTLSIH-ESDVLSILKLCKP-YIDDINKIDKHGRSILYYCIESHSVS----LVEWLIDNGADINITTKYGSTCIGI  449 (631)
T ss_pred             hHHHHHHHhc-cHhHHHHHHHHHh-cCCccccccccCcchHHHHHHcCCHH----HHHHHHHCCCCCCCcCCCCCCHHHH
Confidence            9999987754 43   46899999 99999999999999999999999977    7899999999999999999999999


Q ss_pred             HHHHhCCCCCCCCccchhhHHHHHHcCCCCC
Q 005790          423 HIKMLGNGSSPGTSFRISDTEIFLYTGIDVS  453 (677)
Q Consensus       423 al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~  453 (677)
                      |................+++++||++|.++.
T Consensus       450 A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        450 CVILAHACIPEIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence            9874332221111222567999999998875


No 37 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=1.5e-30  Score=277.82  Aligned_cols=212  Identities=31%  Similarity=0.409  Sum_probs=178.7

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcch
Q 005790          108 GGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIP  187 (677)
Q Consensus       108 G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~  187 (677)
                      -.+-++.|+..|.++.|+.|++.....++..|.+|.|+||||| .+++.+++++|+++|+++|......           
T Consensus        44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAA-iNNrl~v~r~li~~gadvn~~gG~l-----------  111 (600)
T KOG0509|consen   44 SLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAA-INNRLDVARYLISHGADVNAIGGVL-----------  111 (600)
T ss_pred             hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHH-HcCcHHHHHHHHHcCCCccccCCCC-----------
Confidence            3567899999999999999999944577888899999999997 6699999999999999999876543           


Q ss_pred             hhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 005790          188 SVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLH  267 (677)
Q Consensus       188 ~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~  267 (677)
                             +.||||+|+++|++.+|++|+++|+++ +.+|.+|.+|||.|++.|+.-+|-+||.+|+++|.+|..|+||||
T Consensus       112 -------~stPLHWAar~G~~~vv~lLlqhGAdp-t~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLm  183 (600)
T KOG0509|consen  112 -------GSTPLHWAARNGHISVVDLLLQHGADP-TLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLM  183 (600)
T ss_pred             -------CCCcchHHHHcCcHHHHHHHHHcCCCC-ceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHH
Confidence                   359999999999999999999999999 899999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchH
Q 005790          268 IAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTA  347 (677)
Q Consensus       268 ~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~Tp  347 (677)
                      +|+..|+...+..||.-++. +...|                                               |..|.||
T Consensus       184 wAaykg~~~~v~~LL~f~a~-~~~~d-----------------------------------------------~~~g~Tp  215 (600)
T KOG0509|consen  184 WAAYKGFALFVRRLLKFGAS-LLLTD-----------------------------------------------DNHGNTP  215 (600)
T ss_pred             HHHHhcccHHHHHHHHhccc-ccccc-----------------------------------------------cccCCch
Confidence            99999998889999988843 32222                                               2567777


Q ss_pred             HHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhC
Q 005790          348 LHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQR  389 (677)
Q Consensus       348 Lh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~  389 (677)
                      ||+|+..| +..++.+|++ .|++.+.+|.+|.||+++|.+.
T Consensus       216 LHwa~~~g-N~~~v~Ll~~-g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  216 LHWAVVGG-NLTAVKLLLE-GGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             HHHHHhcC-CcceEehhhh-cCCcccccccCCCCHHHHHHHh
Confidence            77777766 6776665555 6677777777777777777555


No 38 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=2.8e-30  Score=275.71  Aligned_cols=208  Identities=26%  Similarity=0.306  Sum_probs=188.9

Q ss_pred             chHHHHHHhcCCHHHHHHHHhc-CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcC
Q 005790          196 NRAVHAAARGGNLKILKELLEN-CTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTD-HQGNTPLHIAAYRG  273 (677)
Q Consensus       196 ~t~Lh~A~~~g~~eivk~LL~~-ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d-~~g~tpL~~A~~~g  273 (677)
                      ..-++.|++.|.++.|+.|++. |.++ +..|.+|.|+||+|+.+++++++++|+++|+++|..+ .-+.||||+|+++|
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v-~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G  123 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESV-NNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG  123 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCC-CCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence            4578899999999999999999 8888 7789999999999999999999999999999999998 66899999999999


Q ss_pred             CHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHh
Q 005790          274 QPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAIT  353 (677)
Q Consensus       274 ~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~  353 (677)
                      +..+|++|+++| ++++.+|.+|.+|||.|+..++          .-++.+|+..+     +++|.+|.+|+||||+|+.
T Consensus       124 ~~~vv~lLlqhG-Adpt~~D~~G~~~lHla~~~~~----------~~~vayll~~~-----~d~d~~D~~grTpLmwAay  187 (600)
T KOG0509|consen  124 HISVVDLLLQHG-ADPTLKDKQGLTPLHLAAQFGH----------TALVAYLLSKG-----ADIDLRDNNGRTPLMWAAY  187 (600)
T ss_pred             cHHHHHHHHHcC-CCCceecCCCCcHHHHHHHhCc----------hHHHHHHHHhc-----ccCCCcCCCCCCHHHHHHH
Confidence            999999999999 7899999999999999999554          45555665554     6799999999999999999


Q ss_pred             CCCcHHHHHHHhhCCCCCccccC-CCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHHH
Q 005790          354 GNVHLELVQLLMSAPSINVNVRD-NDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASHIKM  426 (677)
Q Consensus       354 ~~~~~eiv~lLL~~~Gadin~~d-~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~  426 (677)
                      ++ +...+++||+ .|+.++.+| ..|.||||+|+..|+..+    +.+|++.|++.+.+|.+|.||+..|..+
T Consensus       188 kg-~~~~v~~LL~-f~a~~~~~d~~~g~TpLHwa~~~gN~~~----v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  188 KG-FALFVRRLLK-FGASLLLTDDNHGNTPLHWAVVGGNLTA----VKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             hc-ccHHHHHHHH-hcccccccccccCCchHHHHHhcCCcce----EehhhhcCCcccccccCCCCHHHHHHHh
Confidence            98 6666999999 999999998 899999999999999985    5578889999999999999999988664


No 39 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.95  E-value=6.3e-29  Score=273.05  Aligned_cols=321  Identities=19%  Similarity=0.122  Sum_probs=271.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhh-c
Q 005790           27 ASPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIR-A  105 (677)
Q Consensus        27 ~TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~-d  105 (677)
                      .|+|..||..||.|+|++|+.+|+++..            .+..+.++|..|+..++..+++.|+.    +.+++..+ |
T Consensus       758 ~t~LT~acaggh~e~vellv~rganieh------------rdkkgf~plImaatagh~tvV~~llk----~ha~veaQsd  821 (2131)
T KOG4369|consen  758 KTNLTSACAGGHREEVELLVVRGANIEH------------RDKKGFVPLIMAATAGHITVVQDLLK----AHADVEAQSD  821 (2131)
T ss_pred             cccccccccCccHHHHHHHHHhcccccc------------cccccchhhhhhcccCchHHHHHHHh----hhhhhhhhcc
Confidence            4999999999999999999999999854            36678899999999999999999998    77777754 5


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhc
Q 005790          106 GYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEE  185 (677)
Q Consensus       106 ~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~  185 (677)
                      ..+.|+|-+||..|..++|++||..|+.. ..++-..+|||-+|+ ..|..++|.+||.+|+.+|......-        
T Consensus       822 rtkdt~lSlacsggr~~vvelLl~~gank-ehrnvsDytPlsla~-Sggy~~iI~~llS~GseInSrtgSkl--------  891 (2131)
T KOG4369|consen  822 RTKDTMLSLACSGGRTRVVELLLNAGANK-EHRNVSDYTPLSLAR-SGGYTKIIHALLSSGSEINSRTGSKL--------  891 (2131)
T ss_pred             cccCceEEEecCCCcchHHHHHHHhhccc-cccchhhcCchhhhc-CcchHHHHHHHhhccccccccccccc--------
Confidence            67889999999999999999999999743 446677889999984 78999999999999998887655432        


Q ss_pred             chhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcH
Q 005790          186 IPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTP  265 (677)
Q Consensus       186 ~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tp  265 (677)
                               |-.||++|...||.+.++.|++.|.|++.....+-+|+|-+|+..|..++|.+||.+.+++..+-..|.||
T Consensus       892 ---------gisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltp  962 (2131)
T KOG4369|consen  892 ---------GISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTP  962 (2131)
T ss_pred             ---------CcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcc
Confidence                     35799999999999999999999999977777788899999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHhCCCCcccc--CCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCC
Q 005790          266 LHIAAYRGQPAVVEALILASPSMISVK--NTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNND  343 (677)
Q Consensus       266 L~~A~~~g~~~iv~~LL~~g~~~~~~~--~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~  343 (677)
                      |+-++..|..|+=.+||..| +|++..  .....|+|.+++..          ++...+..|+++.     +-+..+|.+
T Consensus       963 lme~AsgGyvdvg~~li~~g-ad~nasPvp~T~dtalti~a~k----------Gh~kfv~~lln~~-----atv~v~Nkk 1026 (2131)
T KOG4369|consen  963 LMEMASGGYVDVGNLLIAAG-ADTNASPVPNTWDTALTIPANK----------GHTKFVPKLLNGD-----ATVRVPNKK 1026 (2131)
T ss_pred             cchhhcCCccccchhhhhcc-cccccCCCCCcCCccceeecCC----------CchhhhHHhhCCc-----cceecccCC
Confidence            99999999999999999999 555542  33456888888884          4445555555443     447788999


Q ss_pred             CchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHH
Q 005790          344 GRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIR  400 (677)
Q Consensus       344 G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~  400 (677)
                      |+|+|.+|+..+ ++..+.+|++ .++|++..|+...++++.|...|+.+++++++.
T Consensus      1027 G~T~Lwla~~Gg-~lss~~il~~-~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1027 GCTVLWLASAGG-ALSSCPILVS-SVADADQQDNRTNSRTMAAFRKGHFAIVKKMVP 1081 (2131)
T ss_pred             CCcccchhccCC-ccccchHHhh-cccChhhhhcccccccHHHHHhchhheeccccC
Confidence            999999999866 9999999999 899999999999999999999999886655443


No 40 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95  E-value=1.2e-26  Score=247.03  Aligned_cols=237  Identities=14%  Similarity=0.056  Sum_probs=195.2

Q ss_pred             HHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccc------cCCCCCCcH
Q 005790          159 FRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLT------YRDKQGSTI  232 (677)
Q Consensus       159 v~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~------~~d~~g~Tp  232 (677)
                      -++++.+|+++|....                        --+|+..+..|++++|+.+|+++ +      .++..++|+
T Consensus        65 ~~~~~~~~~~i~~~~~------------------------~~~~~~~~~k~~~~~l~s~~~~~-~~~~~~~~~~~~~~~~  119 (437)
T PHA02795         65 YDYFRIHRDNIDQYIV------------------------DRLFAYITYKDIISALVSKNYME-DIFSIIIKNCNSVQDL  119 (437)
T ss_pred             HHHHHHcCcchhhhhh------------------------hhHHhhcchHHHHHHHHhccccc-chhhhhhhccccccHH
Confidence            4788999998774432                        12889999999999999999997 4      578889999


Q ss_pred             HHHHHH--hCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccc-----CCCCCchhhhhhh
Q 005790          233 LHAAAG--RGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVK-----NTSGETFLHSAVS  305 (677)
Q Consensus       233 L~~A~~--~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~-----~~~g~tpLh~A~~  305 (677)
                      ||+++.  .|+.++|++|+++||+++..  .+.||||.|+..++.+++++|+++|+.+.+..     +..+.+++|.|..
T Consensus       120 L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~  197 (437)
T PHA02795        120 LLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDE  197 (437)
T ss_pred             HHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHh
Confidence            999999  89999999999999999985  45899999999999999999999996443333     2346788888887


Q ss_pred             cCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHH
Q 005790          306 GFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDL  385 (677)
Q Consensus       306 ~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~  385 (677)
                                .+..+++++|+++|     +++|.+|..|.||||+|+..| +.++|++|++ .|+++|.+|..|+||||+
T Consensus       198 ----------~~~~eIve~LIs~G-----ADIN~kD~~G~TpLh~Aa~~g-~~eiVelLL~-~GAdIN~~d~~G~TpLh~  260 (437)
T PHA02795        198 ----------PTVLEIYKLCIPYI-----EDINQLDAGGRTLLYRAIYAG-YIDLVSWLLE-NGANVNAVMSNGYTCLDV  260 (437)
T ss_pred             ----------cCHHHHHHHHHhCc-----CCcCcCCCCCCCHHHHHHHcC-CHHHHHHHHH-CCCCCCCcCCCCCCHHHH
Confidence                      56788889998776     669999999999999999988 9999999999 999999999999999999


Q ss_pred             HhhCCCC----chHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCC
Q 005790          386 LKQRPQS----ASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSS  454 (677)
Q Consensus       386 A~~~~~~----~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~  454 (677)
                      |+..|+.    ..-..++++|+++|+++++.+..+   +..            .....++++.|+.+++-++.
T Consensus       261 Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~~~---~~~------------~~~n~~~ik~lI~y~~~ldy  318 (437)
T PHA02795        261 AVDRGSVIARRETHLKILEILLREPLSIDCIKLAI---LNN------------TIENHDVIKLCIKYFMMVDY  318 (437)
T ss_pred             HHHcCCcccccccHHHHHHHHHhCCCCCCchhHHh---hhc------------ccchHHHHHHHHHHHHhccc
Confidence            9999953    111348999999999998754322   110            11137799999999987753


No 41 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94  E-value=2.2e-26  Score=227.88  Aligned_cols=177  Identities=18%  Similarity=0.184  Sum_probs=128.7

Q ss_pred             hhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC--CHHHHHHHHhcCCCCCCCC-CCCCcHHHH
Q 005790          192 WEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRG--QVEVVKDLIASFDIINSTD-HQGNTPLHI  268 (677)
Q Consensus       192 ~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g--~~eivk~Ll~~ga~in~~d-~~g~tpL~~  268 (677)
                      ++...+|||+|+..|+.++|+.|++.+    +..+..|.||||+|+..+  +.+++++|+++|++++..+ ..|.||||+
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~~----n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~   93 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKFV----NDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHH   93 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHhh----hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHH
Confidence            334578999999999999999999762    456788999999999854  8999999999999999987 479999999


Q ss_pred             HHHc---CCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCc
Q 005790          269 AAYR---GQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGR  345 (677)
Q Consensus       269 A~~~---g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~  345 (677)
                      |+..   ++.+++++|+++| ++++.                                                +|..|.
T Consensus        94 a~~~~~~~~~eiv~~Ll~~g-adin~------------------------------------------------~d~~G~  124 (209)
T PHA02859         94 YLSFNKNVEPEILKILIDSG-SSITE------------------------------------------------EDEDGK  124 (209)
T ss_pred             HHHhCccccHHHHHHHHHCC-CCCCC------------------------------------------------cCCCCC
Confidence            8753   4788999998887 44444                                                455555


Q ss_pred             hHHHHHHhC-CCcHHHHHHHhhCCCCCccccCCCCCcHHHH-HhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHH
Q 005790          346 TALHMAITG-NVHLELVQLLMSAPSINVNVRDNDGMTTLDL-LKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASH  423 (677)
Q Consensus       346 TpLh~A~~~-~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~-A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~a  423 (677)
                      ||||+|+.. .++.+++++|++ .|+|++.+|..|.||||. |+..++.+    ++++|+++|++++.+|..|+|||++|
T Consensus       125 TpLh~a~~~~~~~~~iv~~Li~-~gadin~~d~~g~t~Lh~~a~~~~~~~----iv~~Ll~~Gadi~~~d~~g~tpl~la  199 (209)
T PHA02859        125 NLLHMYMCNFNVRINVIKLLID-SGVSFLNKDFDNNNILYSYILFHSDKK----IFDFLTSLGIDINETNKSGYNCYDLI  199 (209)
T ss_pred             CHHHHHHHhccCCHHHHHHHHH-cCCCcccccCCCCcHHHHHHHhcCCHH----HHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence            555555432 125677777776 677777777777777764 34444443    56666777777777777777777766


Q ss_pred             HHH
Q 005790          424 IKM  426 (677)
Q Consensus       424 l~~  426 (677)
                      ...
T Consensus       200 ~~~  202 (209)
T PHA02859        200 KFR  202 (209)
T ss_pred             hhh
Confidence            654


No 42 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94  E-value=4.9e-26  Score=242.46  Aligned_cols=190  Identities=17%  Similarity=0.046  Sum_probs=155.2

Q ss_pred             HHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCcc-----ccCCCCCCCHHHHHHH-hcCCHHH
Q 005790           85 VARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLV-----FGEGEYGVTDIFYAAA-RSKNCDV  158 (677)
Q Consensus        85 ~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~-----~~~~~~g~tpL~~AA~-~~g~~ev  158 (677)
                      ...++|+.    +|++++.+...|     +|+..+..|++++|+.+|+..+     ...+..+.|+||+++. ..|+.++
T Consensus        63 ~~~~~~~~----~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~ei  133 (437)
T PHA02795         63 VLYDYFRI----HRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDI  133 (437)
T ss_pred             HHHHHHHH----cCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHH
Confidence            33455555    999999888777     8999999999999999998633     1467779999999964 1599999


Q ss_pred             HHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccC-----CCCCCcHH
Q 005790          159 FRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYR-----DKQGSTIL  233 (677)
Q Consensus       159 v~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~-----d~~g~TpL  233 (677)
                      |++|+++||+++..+.                     .||||.|+..++.+++++|+++|++..+..     +..+.|++
T Consensus       134 V~~LI~~GADIn~~~~---------------------~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l  192 (437)
T PHA02795        134 VDFMVDHGAVIYKIEC---------------------LNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRG  192 (437)
T ss_pred             HHHHHHCCCCCCCCCC---------------------CCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchh
Confidence            9999999999986321                     489999999999999999999998553333     23477899


Q ss_pred             HHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhh
Q 005790          234 HAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS  305 (677)
Q Consensus       234 ~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~  305 (677)
                      |.|+..++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+.
T Consensus       193 ~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G-AdIN~~d~~G~TpLh~Aa~  263 (437)
T PHA02795        193 FLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENG-ANVNAVMSNGYTCLDVAVD  263 (437)
T ss_pred             HHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998 5555555555555555544


No 43 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.94  E-value=2e-27  Score=261.30  Aligned_cols=317  Identities=21%  Similarity=0.176  Sum_probs=277.1

Q ss_pred             cccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCH
Q 005790           66 ETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTD  145 (677)
Q Consensus        66 ~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tp  145 (677)
                      .+..+-.++|..|+.+++.+++++|+.    +|+++..+|..|.+||..|+..||..+|+.|+.+.+.+....|..+.|+
T Consensus       752 ~Te~n~~t~LT~acaggh~e~vellv~----rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~  827 (2131)
T KOG4369|consen  752 LTEPNIKTNLTSACAGGHREEVELLVV----RGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTM  827 (2131)
T ss_pred             ccCccccccccccccCccHHHHHHHHH----hcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCce
Confidence            344456789999999999999999998    9999999999999999999999999999999999988888889999999


Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccC
Q 005790          146 IFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYR  225 (677)
Q Consensus       146 L~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~  225 (677)
                      |.+|| ..|+.++|++||.+|++-....-.                   ..|||.+|...|..+||+.|+..|++++...
T Consensus       828 lSlac-sggr~~vvelLl~~gankehrnvs-------------------DytPlsla~Sggy~~iI~~llS~GseInSrt  887 (2131)
T KOG4369|consen  828 LSLAC-SGGRTRVVELLLNAGANKEHRNVS-------------------DYTPLSLARSGGYTKIIHALLSSGSEINSRT  887 (2131)
T ss_pred             EEEec-CCCcchHHHHHHHhhccccccchh-------------------hcCchhhhcCcchHHHHHHHhhccccccccc
Confidence            99985 889999999999999864433222                   1589999999999999999999999984433


Q ss_pred             -CCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhh
Q 005790          226 -DKQGSTILHAAAGRGQVEVVKDLIASFDIINSTD-HQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSA  303 (677)
Q Consensus       226 -d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d-~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A  303 (677)
                       ..-|..||++|..+||.+.++.|++.|.|+|..- -+.+|+|-+|+..|+.+++.+||... +++..+-..|.|||+-+
T Consensus       888 gSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~-anvehRaktgltplme~  966 (2131)
T KOG4369|consen  888 GSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQ-ANVEHRAKTGLTPLMEM  966 (2131)
T ss_pred             ccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHh-hhhhhhcccCCcccchh
Confidence             4678999999999999999999999999999764 34689999999999999999999988 77888999999999999


Q ss_pred             hhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccC--CCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCc
Q 005790          304 VSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKN--NDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMT  381 (677)
Q Consensus       304 ~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d--~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~T  381 (677)
                      +.+|..++-+          +|     ++.|+|+|..-  ....|+|-+++..| |...|++|+. ..|-+..+|.+|.|
T Consensus       967 AsgGyvdvg~----------~l-----i~~gad~nasPvp~T~dtalti~a~kG-h~kfv~~lln-~~atv~v~NkkG~T 1029 (2131)
T KOG4369|consen  967 ASGGYVDVGN----------LL-----IAAGADTNASPVPNTWDTALTIPANKG-HTKFVPKLLN-GDATVRVPNKKGCT 1029 (2131)
T ss_pred             hcCCccccch----------hh-----hhcccccccCCCCCcCCccceeecCCC-chhhhHHhhC-CccceecccCCCCc
Confidence            9976555444          44     45556666532  24569999999988 9999999999 89999999999999


Q ss_pred             HHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHHHHHHHhC
Q 005790          382 TLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIASHIKMLG  428 (677)
Q Consensus       382 pL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~  428 (677)
                      +|.+|+.-|+..    .+.+|+++++|++.+|+.-.++++.|++...
T Consensus      1030 ~Lwla~~Gg~ls----s~~il~~~~ad~d~qdnr~~S~~maafRKgh 1072 (2131)
T KOG4369|consen 1030 VLWLASAGGALS----SCPILVSSVADADQQDNRTNSRTMAAFRKGH 1072 (2131)
T ss_pred             ccchhccCCccc----cchHHhhcccChhhhhcccccccHHHHHhch
Confidence            999999999988    4888999999999999999999999887644


No 44 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94  E-value=7.1e-26  Score=224.23  Aligned_cols=178  Identities=20%  Similarity=0.153  Sum_probs=155.3

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHh-cCCHHHHHHHHhcCCCcccccccCCcchhhh
Q 005790          105 AGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAAR-SKNCDVFRLIYDFAVSPRFLTAKGGELEEHI  183 (677)
Q Consensus       105 d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~-~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~  183 (677)
                      ...+.||||+|+..|+.++|+.|++.    ++..+..|.||||+|+.. .++.+++++|+++|++++..+..        
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~--------   85 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRD--------   85 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCC--------
Confidence            45678999999999999999999975    345688899999998643 35899999999999999876532        


Q ss_pred             hcchhhhhhhccchHHHHHHhc---CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHH--hCCHHHHHHHHhcCCCCCCC
Q 005790          184 EEIPSVYKWEMMNRAVHAAARG---GNLKILKELLENCTDVLTYRDKQGSTILHAAAG--RGQVEVVKDLIASFDIINST  258 (677)
Q Consensus       184 ~~~~~~~~~~~~~t~Lh~A~~~---g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~--~g~~eivk~Ll~~ga~in~~  258 (677)
                                .|.||||+|+..   ++.+++++|+++|+++ +.+|..|.||||+|+.  .++.+++++|+++|++++.+
T Consensus        86 ----------~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~  154 (209)
T PHA02859         86 ----------NNLSALHHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNK  154 (209)
T ss_pred             ----------CCCCHHHHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc
Confidence                      136999998764   4799999999999999 7899999999999886  46899999999999999999


Q ss_pred             CCCCCcHHHH-HHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhc
Q 005790          259 DHQGNTPLHI-AAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSG  306 (677)
Q Consensus       259 d~~g~tpL~~-A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~  306 (677)
                      |..|.||||. |+..++.+++++|++.| ++++.++..|.|||++|...
T Consensus       155 d~~g~t~Lh~~a~~~~~~~iv~~Ll~~G-adi~~~d~~g~tpl~la~~~  202 (209)
T PHA02859        155 DFDNNNILYSYILFHSDKKIFDFLTSLG-IDINETNKSGYNCYDLIKFR  202 (209)
T ss_pred             cCCCCcHHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhh
Confidence            9999999995 56788999999999999 68999999999999999863


No 45 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93  E-value=2.8e-26  Score=213.62  Aligned_cols=238  Identities=21%  Similarity=0.249  Sum_probs=204.9

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhh
Q 005790          105 AGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIE  184 (677)
Q Consensus       105 d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~  184 (677)
                      +..|...+-.|...|+.+++..++.-.+..+...+.+|+..++.++ -+++.+.+..+|.+|+..|..+..         
T Consensus        59 ~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~a-p~~s~~k~sttltN~~rgnevs~~---------  128 (296)
T KOG0502|consen   59 NALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAA-PCGSVDKVSTTLTNGARGNEVSLM---------  128 (296)
T ss_pred             HhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcC-CCCCcceeeeeecccccCCccccc---------
Confidence            3456667788899999999999988888777788888999999885 778999999999999877755443         


Q ss_pred             cchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCc
Q 005790          185 EIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNT  264 (677)
Q Consensus       185 ~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~t  264 (677)
                                +.+|+.+++...+++.+..+.++.   .|..|+.|.|||+||+..|++++|++||+.|++++...+...+
T Consensus       129 ----------p~s~~slsVhql~L~~~~~~~~n~---VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~res  195 (296)
T KOG0502|consen  129 ----------PWSPLSLSVHQLHLDVVDLLVNNK---VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRES  195 (296)
T ss_pred             ----------cCChhhHHHHHHHHHHHHHHhhcc---ccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhh
Confidence                      367999999988888877776643   3678999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCC
Q 005790          265 PLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDG  344 (677)
Q Consensus       265 pL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G  344 (677)
                      +|++|++.|..++|++||..+.+                                                 +|.-|.+|
T Consensus       196 ALsLAt~ggytdiV~lLL~r~vd-------------------------------------------------VNvyDwNG  226 (296)
T KOG0502|consen  196 ALSLATRGGYTDIVELLLTREVD-------------------------------------------------VNVYDWNG  226 (296)
T ss_pred             hHhHHhcCChHHHHHHHHhcCCC-------------------------------------------------cceeccCC
Confidence            99999999999999999988832                                                 66778889


Q ss_pred             chHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHH
Q 005790          345 RTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIA  421 (677)
Q Consensus       345 ~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~  421 (677)
                      .|||.||++.| |.++|+.||. .|||++..+..|.+++.+|+..|+.     +++..|++-++.+++|..-+||+|
T Consensus       227 gTpLlyAvrgn-hvkcve~Ll~-sGAd~t~e~dsGy~~mdlAValGyr-----~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  227 GTPLLYAVRGN-HVKCVESLLN-SGADVTQEDDSGYWIMDLAVALGYR-----IVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             CceeeeeecCC-hHHHHHHHHh-cCCCcccccccCCcHHHHHHHhhhH-----HHHHHHHHHHHHHhhcccCCCCCC
Confidence            99999999977 9999999999 9999999999999999999999985     477777888888888888888864


No 46 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.92  E-value=1.3e-25  Score=209.15  Aligned_cols=235  Identities=23%  Similarity=0.214  Sum_probs=201.1

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhc
Q 005790           26 YASPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRA  105 (677)
Q Consensus        26 g~TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d  105 (677)
                      |.+-+-.|...|+.+++..++...++.++.           ....+...++.++-+++...+..++.    +|+..|..+
T Consensus        62 ge~~~~~~~~s~nsd~~v~s~~~~~~~~~~-----------t~p~g~~~~~v~ap~~s~~k~sttlt----N~~rgnevs  126 (296)
T KOG0502|consen   62 GESLLTVAVRSGNSDVAVQSAQLDPDAIDE-----------TDPEGWSALLVAAPCGSVDKVSTTLT----NGARGNEVS  126 (296)
T ss_pred             CCcccchhhhcCCcHHHHHhhccCCCCCCC-----------CCchhhhhhhhcCCCCCcceeeeeec----ccccCCccc
Confidence            445566777788888888887776665443           45557788888998998888888888    889899999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhc
Q 005790          106 GYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEE  185 (677)
Q Consensus       106 ~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~  185 (677)
                      -.+.+|+.+++...+++++..+.+.   .++..|+.|.|||+||| ..|+.++|++||+.|++|+......         
T Consensus       127 ~~p~s~~slsVhql~L~~~~~~~~n---~VN~~De~GfTpLiWAa-a~G~i~vV~fLL~~GAdp~~lgk~r---------  193 (296)
T KOG0502|consen  127 LMPWSPLSLSVHQLHLDVVDLLVNN---KVNACDEFGFTPLIWAA-AKGHIPVVQFLLNSGADPDALGKYR---------  193 (296)
T ss_pred             cccCChhhHHHHHHHHHHHHHHhhc---cccCccccCchHhHHHH-hcCchHHHHHHHHcCCChhhhhhhh---------
Confidence            9999999999999999988877764   67889999999999997 5599999999999999998764332         


Q ss_pred             chhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcH
Q 005790          186 IPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTP  265 (677)
Q Consensus       186 ~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tp  265 (677)
                                .++|.+|++.|..+||++||+++.|+ |..|-+|-|||.+|+..|+.+||+.||+.|++++..+..|+++
T Consensus       194 ----------esALsLAt~ggytdiV~lLL~r~vdV-NvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~  262 (296)
T KOG0502|consen  194 ----------ESALSLATRGGYTDIVELLLTREVDV-NVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWI  262 (296)
T ss_pred             ----------hhhHhHHhcCChHHHHHHHHhcCCCc-ceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcH
Confidence                      48999999999999999999999999 8899999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhh
Q 005790          266 LHIAAYRGQPAVVEALILASPSMISVKNTSGETFLH  301 (677)
Q Consensus       266 L~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh  301 (677)
                      +..|+..|+. +|+..|+.. .+....+..-.+|+|
T Consensus       263 mdlAValGyr-~Vqqvie~h-~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  263 MDLAVALGYR-IVQQVIEKH-ALKLCQDSEKRTPLH  296 (296)
T ss_pred             HHHHHHhhhH-HHHHHHHHH-HHHHhhcccCCCCCC
Confidence            9999999988 888888876 566677777777775


No 47 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.92  E-value=1.9e-24  Score=233.21  Aligned_cols=247  Identities=23%  Similarity=0.225  Sum_probs=197.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHcC------------CCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCc
Q 005790          111 LLYTAASAGDLGFVKQLLDKN------------PLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGE  178 (677)
Q Consensus       111 ~L~~Aa~~g~~eivk~LL~~g------------~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~  178 (677)
                      =|--|+..|+++.|..||+..            .+.++..|.+|.|.||+|| .+|+.+++++|+++.+-.+..+..   
T Consensus         6 el~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~-Lng~~~is~llle~ea~ldl~d~k---   81 (854)
T KOG0507|consen    6 ELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAV-LNGQNQISKLLLDYEALLDLCDTK---   81 (854)
T ss_pred             hHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHH-hcCchHHHHHHhcchhhhhhhhcc---
Confidence            367789999999999999862            2445667888999999985 679999999999987755555433   


Q ss_pred             chhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCC
Q 005790          179 LEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINST  258 (677)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~  258 (677)
                                      |.+|||+|+..|+.|+++.|+..+..+ +.....|.||||.|++.|+.+++.+|+.+|+++-.+
T Consensus        82 ----------------g~~plhlaaw~g~~e~vkmll~q~d~~-na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~  144 (854)
T KOG0507|consen   82 ----------------GILPLHLAAWNGNLEIVKMLLLQTDIL-NAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIR  144 (854)
T ss_pred             ----------------CcceEEehhhcCcchHHHHHHhcccCC-CcccccCcCccchhhhhcchHHHHHHHhcCCCcccc
Confidence                            468999999999999999999999555 888999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhh
Q 005790          259 DHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIIN  338 (677)
Q Consensus       259 d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in  338 (677)
                      +..+.|+|.+|++.|..++|+.|++.. .+...                                 +...     +  -.
T Consensus       145 nns~~t~ldlA~qfgr~~Vvq~ll~~~-~~~~~---------------------------------~~~~-----~--~~  183 (854)
T KOG0507|consen  145 NNSKETVLDLASRFGRAEVVQMLLQKK-FPVQS---------------------------------SLRV-----G--DI  183 (854)
T ss_pred             CcccccHHHHHHHhhhhHHHHHHhhhc-cchhh---------------------------------cccC-----C--CC
Confidence            999999999999999999999999762 11110                                 0000     0  12


Q ss_pred             ccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCc
Q 005790          339 AKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARR  418 (677)
Q Consensus       339 ~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T  418 (677)
                      .++..+-+|||.|+.+| |.++++.|++ .|.|+|.....| |+||.|+.+|..+    ++.+|++.|+....++.+|+|
T Consensus       184 ~~~~~~~~plHlaakng-h~~~~~~ll~-ag~din~~t~~g-talheaalcgk~e----vvr~ll~~gin~h~~n~~~qt  256 (854)
T KOG0507|consen  184 KRPFPAIYPLHLAAKNG-HVECMQALLE-AGFDINYTTEDG-TALHEAALCGKAE----VVRFLLEIGINTHIKNQHGQT  256 (854)
T ss_pred             CCCCCCcCCcchhhhcc-hHHHHHHHHh-cCCCcccccccc-hhhhhHhhcCcch----hhhHHHhhccccccccccchH
Confidence            34566778888888877 8888888888 888888776665 8888888888877    577888888888888888888


Q ss_pred             hHHHHHHH
Q 005790          419 AIASHIKM  426 (677)
Q Consensus       419 ~L~~al~~  426 (677)
                      +|-...+.
T Consensus       257 aldil~d~  264 (854)
T KOG0507|consen  257 ALDIIIDL  264 (854)
T ss_pred             HHHHHHhc
Confidence            87665554


No 48 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91  E-value=9.2e-24  Score=248.23  Aligned_cols=255  Identities=22%  Similarity=0.185  Sum_probs=176.3

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcc
Q 005790          108 GGWLLYTAASAGDLGFVKQLLDKN-PLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEI  186 (677)
Q Consensus       108 G~t~L~~Aa~~g~~eivk~LL~~g-~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~  186 (677)
                      +...|+.||..|+.+.|+.+++.+ ..+++..|..|.||||++|+.+++.+++++|+++|+    .              
T Consensus        17 ~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~--------------   78 (743)
T TIGR00870        17 EEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----R--------------   78 (743)
T ss_pred             HHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----C--------------
Confidence            456788888888888888888762 235566777788888866677788888888888775    1              


Q ss_pred             hhhhhhhccchHHHHHHhcC---CHHHHHHHHhcCCC------c---cccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Q 005790          187 PSVYKWEMMNRAVHAAARGG---NLKILKELLENCTD------V---LTYRDKQGSTILHAAAGRGQVEVVKDLIASFDI  254 (677)
Q Consensus       187 ~~~~~~~~~~t~Lh~A~~~g---~~eivk~LL~~ga~------~---~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~  254 (677)
                           +..|.||||.|+..+   ...+++.+...+.+      +   .......|.||||+|+.+|+.++|++|+++|++
T Consensus        79 -----~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAd  153 (743)
T TIGR00870        79 -----GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGAS  153 (743)
T ss_pred             -----CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCC
Confidence                 112467888877622   22344444444322      1   011234688999999999999999999999998


Q ss_pred             CCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHH--HHHhhHH
Q 005790          255 INSTD--------------HQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYA--FRRLDRQ  318 (677)
Q Consensus       255 in~~d--------------~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~--~~~L~~~  318 (677)
                      ++..+              ..|.||||+|+..|+.+++++|+++| ++++..|..|+||||+|+..+....  .+.....
T Consensus       154 v~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~g-adin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~  232 (743)
T TIGR00870       154 VPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDP-ADILTADSLGNTLLHLLVMENEFKAEYEELSCQM  232 (743)
T ss_pred             CCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCC-cchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHH
Confidence            88653              25889999999999999999999988 6789999999999999998652211  1111122


Q ss_pred             HHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhC
Q 005790          319 VKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQR  389 (677)
Q Consensus       319 ~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~  389 (677)
                      .+.+..++... .+.....+..|.+|.||||+|+..+ +.+++++|++ .+++..........|.+.+...
T Consensus       233 ~~~l~~ll~~~-~~~~el~~i~N~~g~TPL~~A~~~g-~~~l~~lLL~-~~~~~kk~~a~~~~~~~~~~~~  300 (743)
T TIGR00870       233 YNFALSLLDKL-RDSKELEVILNHQGLTPLKLAAKEG-RIVLFRLKLA-IKYKQKKFVAWPNGQQLLSLYW  300 (743)
T ss_pred             HHHHHHHHhcc-CChHhhhhhcCCCCCCchhhhhhcC-CccHHHHHHH-HHHhcceeeccCcchHhHhhhc
Confidence            22232222222 1112223677999999999999988 9999999999 6666555556667777766543


No 49 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89  E-value=1.4e-22  Score=239.65  Aligned_cols=191  Identities=23%  Similarity=0.283  Sum_probs=161.9

Q ss_pred             CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 005790          206 GNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILAS  285 (677)
Q Consensus       206 g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g  285 (677)
                      ...++-.++.+.+...   .+..+.++|+.||..|+.++++.|++.|+++|..|..|.||||+|+..|+.+++++|+++|
T Consensus       505 ~~l~v~~ll~~~~~~~---~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g  581 (823)
T PLN03192        505 HDLNVGDLLGDNGGEH---DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHA  581 (823)
T ss_pred             ccccHHHHHhhccccc---CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcC
Confidence            3344555555554432   4456779999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHh
Q 005790          286 PSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLM  365 (677)
Q Consensus       286 ~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL  365 (677)
                       ++++.+|.+|.||||+|+..+          +.+++++|++.+.     ..  ....|.++||.|+..| +.+++++|+
T Consensus       582 -adin~~d~~G~TpL~~A~~~g----------~~~iv~~L~~~~~-----~~--~~~~~~~~L~~Aa~~g-~~~~v~~Ll  642 (823)
T PLN03192        582 -CNVHIRDANGNTALWNAISAK----------HHKIFRILYHFAS-----IS--DPHAAGDLLCTAAKRN-DLTAMKELL  642 (823)
T ss_pred             -CCCCCcCCCCCCHHHHHHHhC----------CHHHHHHHHhcCc-----cc--CcccCchHHHHHHHhC-CHHHHHHHH
Confidence             789999999999999999954          4556666665442     11  2346789999999988 999999999


Q ss_pred             hCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccC-CchHHHH
Q 005790          366 SAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSA-RRAIASH  423 (677)
Q Consensus       366 ~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G-~T~L~~a  423 (677)
                      + +|+|+|.+|.+|.||||+|+..|+.+    ++++|+++|||++..|..| .||+..+
T Consensus       643 ~-~Gadin~~d~~G~TpLh~A~~~g~~~----iv~~Ll~~GAdv~~~~~~g~~t~~~l~  696 (823)
T PLN03192        643 K-QGLNVDSEDHQGATALQVAMAEDHVD----MVRLLIMNGADVDKANTDDDFSPTELR  696 (823)
T ss_pred             H-CCCCCCCCCCCCCCHHHHHHHCCcHH----HHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence            9 99999999999999999999999987    7999999999999999988 8886544


No 50 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.89  E-value=4.3e-23  Score=222.79  Aligned_cols=252  Identities=23%  Similarity=0.182  Sum_probs=211.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhcCCch-hhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcC
Q 005790           28 SPIDWAAANGHYDLVRELLRIDGNHL-IKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAG  106 (677)
Q Consensus        28 TpL~~Aa~~G~~diV~~LL~~ga~~n-~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~  106 (677)
                      +=|.-|+..|+++.|..||+.----- ..+...+....-..+.++.|.||+|+.+++..+.++|++    +.+-+++.|.
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle----~ea~ldl~d~   80 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLD----YEALLDLCDT   80 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhc----chhhhhhhhc
Confidence            34778999999999999998521100 000111111122345589999999999999999999999    7888888999


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcc
Q 005790          107 YGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEI  186 (677)
Q Consensus       107 ~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~  186 (677)
                      .|.+|||+|+..|+.++|++||..+ +..+.....|.||||.|| ..|+.+++.+|+.+|+||-..+..+          
T Consensus        81 kg~~plhlaaw~g~~e~vkmll~q~-d~~na~~~e~~tplhlaa-qhgh~dvv~~Ll~~~adp~i~nns~----------  148 (854)
T KOG0507|consen   81 KGILPLHLAAWNGNLEIVKMLLLQT-DILNAVNIENETPLHLAA-QHGHLEVVFYLLKKNADPFIRNNSK----------  148 (854)
T ss_pred             cCcceEEehhhcCcchHHHHHHhcc-cCCCcccccCcCccchhh-hhcchHHHHHHHhcCCCccccCccc----------
Confidence            9999999999999999999999998 567778889999999996 6699999999999999998777664          


Q ss_pred             hhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCc-------cccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCC
Q 005790          187 PSVYKWEMMNRAVHAAARGGNLKILKELLENCTDV-------LTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTD  259 (677)
Q Consensus       187 ~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~-------~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d  259 (677)
                               .|+|..|++.|..++|+.|+...-++       ...++..+.+|||.|+++|+.++++.|+++|.++|...
T Consensus       149 ---------~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t  219 (854)
T KOG0507|consen  149 ---------ETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTT  219 (854)
T ss_pred             ---------ccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCccccc
Confidence                     68999999999999999999873222       13456678899999999999999999999999999988


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhc
Q 005790          260 HQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSG  306 (677)
Q Consensus       260 ~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~  306 (677)
                      ..| |+||.|+..|..++|.+|++.| .....++.+|+|+|.+....
T Consensus       220 ~~g-talheaalcgk~evvr~ll~~g-in~h~~n~~~qtaldil~d~  264 (854)
T KOG0507|consen  220 EDG-TALHEAALCGKAEVVRFLLEIG-INTHIKNQHGQTALDIIIDL  264 (854)
T ss_pred             ccc-hhhhhHhhcCcchhhhHHHhhc-cccccccccchHHHHHHHhc
Confidence            776 9999999999999999999999 67899999999999887653


No 51 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.89  E-value=1e-22  Score=239.42  Aligned_cols=231  Identities=20%  Similarity=0.142  Sum_probs=179.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHHh--cCCchhhhhhHHhhhhccccccccccHH-HHHhhchHHHHHHHHhhhhcCCCCchhh
Q 005790           28 SPIDWAAANGHYDLVRELLRI--DGNHLIKLTSLRRIRRLETVWDDEEQFD-DVAKCRSKVARKLFLECKSKNGKNSLIR  104 (677)
Q Consensus        28 TpL~~Aa~~G~~diV~~LL~~--ga~~n~~~~~~~~~~~l~~~~~~~~~l~-~A~~~~~~~v~~lLl~~~~~~g~~~~~~  104 (677)
                      .+|+.||+.|+.+.|+.+++.  +.++|.            .+..+.+||| .|+.+++.+++++|++    .|.    .
T Consensus        19 ~~~l~A~~~g~~~~v~~lL~~~~~~~in~------------~d~~G~t~Lh~~A~~~~~~eiv~lLl~----~g~----~   78 (743)
T TIGR00870        19 KAFLPAAERGDLASVYRDLEEPKKLNINC------------PDRLGRSALFVAAIENENLELTELLLN----LSC----R   78 (743)
T ss_pred             HHHHHHHHcCCHHHHHHHhccccccCCCC------------cCccchhHHHHHHHhcChHHHHHHHHh----CCC----C
Confidence            899999999999999999999  777653            3557899999 9999999999999998    555    5


Q ss_pred             cCCCChHHHHHHHc---CCHHHHHHHHHcCCCc-----c----ccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccc
Q 005790          105 AGYGGWLLYTAASA---GDLGFVKQLLDKNPLL-----V----FGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFL  172 (677)
Q Consensus       105 d~~G~t~L~~Aa~~---g~~eivk~LL~~g~~~-----~----~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~  172 (677)
                      +..|.||||.|+..   +..++++.++..++..     +    ......|.||||+|| ..|+.++|++|+++|++++..
T Consensus        79 ~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa-~~~~~eiVklLL~~GAdv~~~  157 (743)
T TIGR00870        79 GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAA-HRQNYEIVKLLLERGASVPAR  157 (743)
T ss_pred             CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHH-HhCCHHHHHHHHhCCCCCCcC
Confidence            77899999999972   2233444444444221     1    112356999999996 669999999999999999955


Q ss_pred             cccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC---------CHH
Q 005790          173 TAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRG---------QVE  243 (677)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g---------~~e  243 (677)
                      .......     ..........|.+|||.|+..|+.+++++|+++|+++ +..|..|+||||+|+..+         ...
T Consensus       158 ~~~~~~~-----~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi-n~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~  231 (743)
T TIGR00870       158 ACGDFFV-----KSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI-LTADSLGNTLLHLLVMENEFKAEYEELSCQ  231 (743)
T ss_pred             cCCchhh-----cCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch-hhHhhhhhHHHHHHHhhhhhhHHHHHHHHH
Confidence            4322110     0000111235789999999999999999999999998 789999999999999987         234


Q ss_pred             HHHHHHhcCCCC-------CCCCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 005790          244 VVKDLIASFDII-------NSTDHQGNTPLHIAAYRGQPAVVEALILAS  285 (677)
Q Consensus       244 ivk~Ll~~ga~i-------n~~d~~g~tpL~~A~~~g~~~iv~~LL~~g  285 (677)
                      +.+++++.++..       +..|.+|.||||+|+..|+.+++++|++.+
T Consensus       232 ~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~  280 (743)
T TIGR00870       232 MYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK  280 (743)
T ss_pred             HHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence            666777666654       567899999999999999999999999853


No 52 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.89  E-value=1.1e-22  Score=213.13  Aligned_cols=215  Identities=24%  Similarity=0.287  Sum_probs=182.9

Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 005790          198 AVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAV  277 (677)
Q Consensus       198 ~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~i  277 (677)
                      .+..|+..|..+-|+.|+..|+.+ +..+.+|.|+||.+|...+.+||++|+++|++||..|..|+||||.|+..|+..+
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~-~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASP-NLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCc-cccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence            566788999999999999999998 8899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHh----------------hHHHHHHHHHHcccccchhhhhhccC
Q 005790          278 VEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRL----------------DRQVKLMKQLASGQIFNMEDIINAKN  341 (677)
Q Consensus       278 v~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L----------------~~~~eiv~~Ll~~~~~~~~~~in~~d  341 (677)
                      +++|+.+| +++...+.+|..|+..+..-....+....                ...+.-+...+.     .|.+.++++
T Consensus       122 ~~~li~~g-A~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~-----~G~~~d~~~  195 (527)
T KOG0505|consen  122 VEYLIQHG-ANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLN-----AGAELDARH  195 (527)
T ss_pred             HHHHHHhh-hhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHh-----ccccccccc
Confidence            99999999 67888899999998877653322222111                001111222222     234467777


Q ss_pred             CCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHH
Q 005790          342 NDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIA  421 (677)
Q Consensus       342 ~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~  421 (677)
                      ..|.|+||.|+..| ..++.++||+ .|.+++++|.+|+||||.|+.++..+    ++++|+++|++++.....|.||+.
T Consensus       196 ~rG~T~lHvAaa~G-y~e~~~lLl~-ag~~~~~~D~dgWtPlHAAA~Wg~~~----~~elL~~~ga~~d~~t~~g~~p~d  269 (527)
T KOG0505|consen  196 ARGATALHVAAANG-YTEVAALLLQ-AGYSVNIKDYDGWTPLHAAAHWGQED----ACELLVEHGADMDAKTKMGETPLD  269 (527)
T ss_pred             cccchHHHHHHhhh-HHHHHHHHHH-hccCcccccccCCCcccHHHHhhhHh----HHHHHHHhhcccchhhhcCCCCcc
Confidence            78999999999988 9999999999 99999999999999999999999988    688999999999999999999987


Q ss_pred             HHHH
Q 005790          422 SHIK  425 (677)
Q Consensus       422 ~al~  425 (677)
                      .+-.
T Consensus       270 v~de  273 (527)
T KOG0505|consen  270 VADE  273 (527)
T ss_pred             chhh
Confidence            6654


No 53 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.88  E-value=6.4e-22  Score=234.09  Aligned_cols=174  Identities=25%  Similarity=0.344  Sum_probs=156.6

Q ss_pred             ccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 005790          194 MMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRG  273 (677)
Q Consensus       194 ~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g  273 (677)
                      .+.++||.|+..|+.++++.|++.|+++ +..|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|
T Consensus       524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g  602 (823)
T PLN03192        524 NMASNLLTVASTGNAALLEELLKAKLDP-DIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAK  602 (823)
T ss_pred             cchhHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhC
Confidence            3568999999999999999999999998 889999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHh
Q 005790          274 QPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAIT  353 (677)
Q Consensus       274 ~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~  353 (677)
                      +.+++++|++.+. ..  ....+.++||.|+.          .++.+++++|++.+     +++|.+|.+|.||||+|+.
T Consensus       603 ~~~iv~~L~~~~~-~~--~~~~~~~~L~~Aa~----------~g~~~~v~~Ll~~G-----adin~~d~~G~TpLh~A~~  664 (823)
T PLN03192        603 HHKIFRILYHFAS-IS--DPHAAGDLLCTAAK----------RNDLTAMKELLKQG-----LNVDSEDHQGATALQVAMA  664 (823)
T ss_pred             CHHHHHHHHhcCc-cc--CcccCchHHHHHHH----------hCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHH
Confidence            9999999998763 22  23567899999999          45667777777665     5699999999999999999


Q ss_pred             CCCcHHHHHHHhhCCCCCccccCCCC-CcHHHHHhh
Q 005790          354 GNVHLELVQLLMSAPSINVNVRDNDG-MTTLDLLKQ  388 (677)
Q Consensus       354 ~~~~~eiv~lLL~~~Gadin~~d~~G-~TpL~~A~~  388 (677)
                      .| +.+++++|++ +|+|++..|..| .||++++..
T Consensus       665 ~g-~~~iv~~Ll~-~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        665 ED-HVDMVRLLIM-NGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             CC-cHHHHHHHHH-cCCCCCCCCCCCCCCHHHHHHH
Confidence            88 9999999999 999999999988 899987643


No 54 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.87  E-value=5.5e-22  Score=197.85  Aligned_cols=165  Identities=27%  Similarity=0.282  Sum_probs=128.5

Q ss_pred             CchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHh----cCCHHHHHHHHhcCCCccccccc
Q 005790          100 NSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAAR----SKNCDVFRLIYDFAVSPRFLTAK  175 (677)
Q Consensus       100 ~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~----~g~~evv~lLl~~Gad~~~~~~~  175 (677)
                      -+|+.|.+|+|+||||+..++.++|+.||+.|-.+++..+.-|+||++.+|.-    ..+.++|.-|+.-| |+|.....
T Consensus       260 vVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ  338 (452)
T KOG0514|consen  260 VVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQ  338 (452)
T ss_pred             HhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhh
Confidence            46788999999999999999999999999999999999999999999998743    24566777777765 45544333


Q ss_pred             CCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHh-cCCC
Q 005790          176 GGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIA-SFDI  254 (677)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~-~ga~  254 (677)
                      .                  |+|+|++|+.+|..++|+.||..|+|+ |.+|.+|.|+|++||.+||.|+|++||. .++|
T Consensus       339 ~------------------gQTALMLAVSHGr~d~vk~LLacgAdV-NiQDdDGSTALMCA~EHGhkEivklLLA~p~cd  399 (452)
T KOG0514|consen  339 H------------------GQTALMLAVSHGRVDMVKALLACGADV-NIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCD  399 (452)
T ss_pred             h------------------cchhhhhhhhcCcHHHHHHHHHccCCC-ccccCCccHHHhhhhhhChHHHHHHHhccCccc
Confidence            2                  467777777777777777777777777 6777777777777777777777777776 4567


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q 005790          255 INSTDHQGNTPLHIAAYRGQPAVVEALILA  284 (677)
Q Consensus       255 in~~d~~g~tpL~~A~~~g~~~iv~~LL~~  284 (677)
                      +...|.+|.|+|++|...|+.+|.-+|..+
T Consensus       400 ~sLtD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  400 ISLTDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             ceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence            777777777777777777777777666543


No 55 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84  E-value=7.1e-21  Score=189.94  Aligned_cols=160  Identities=30%  Similarity=0.397  Sum_probs=138.3

Q ss_pred             cccCCCCCCcHHHHHHHhCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHc-----CCHHHHHHHHHhCCCCcccc-CC
Q 005790          222 LTYRDKQGSTILHAAAGRGQVEVVKDLIASF-DIINSTDHQGNTPLHIAAYR-----GQPAVVEALILASPSMISVK-NT  294 (677)
Q Consensus       222 ~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~g-a~in~~d~~g~tpL~~A~~~-----g~~~iv~~LL~~g~~~~~~~-~~  294 (677)
                      .|..|.+|+|+||||+.++|+++|+.||+.| +++|..+.-|+||+|+|+..     .+.++|..|...|  ++|.+ ..
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg--nVNaKAsQ  338 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG--DVNAKASQ  338 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc--Ccchhhhh
Confidence            3778999999999999999999999999988 58999999999999999853     4678899999888  34544 45


Q ss_pred             CCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccc
Q 005790          295 SGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNV  374 (677)
Q Consensus       295 ~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~  374 (677)
                      .|+|+|++|+..|+.+.          ++.|     +..++|+|.+|.+|.|+|++||++| |.|||++||...++|+..
T Consensus       339 ~gQTALMLAVSHGr~d~----------vk~L-----LacgAdVNiQDdDGSTALMCA~EHG-hkEivklLLA~p~cd~sL  402 (452)
T KOG0514|consen  339 HGQTALMLAVSHGRVDM----------VKAL-----LACGADVNIQDDDGSTALMCAAEHG-HKEIVKLLLAVPSCDISL  402 (452)
T ss_pred             hcchhhhhhhhcCcHHH----------HHHH-----HHccCCCccccCCccHHHhhhhhhC-hHHHHHHHhccCccccee
Confidence            69999999999655554          4444     5566889999999999999999999 999999999999999999


Q ss_pred             cCCCCCcHHHHHhhCCCCchHHHHH
Q 005790          375 RDNDGMTTLDLLKQRPQSASSDILI  399 (677)
Q Consensus       375 ~d~~G~TpL~~A~~~~~~~~~~~lv  399 (677)
                      .|.+|-|+|.+|...|+.++.-.|.
T Consensus       403 tD~DgSTAl~IAleagh~eIa~mlY  427 (452)
T KOG0514|consen  403 TDVDGSTALSIALEAGHREIAVMLY  427 (452)
T ss_pred             ecCCCchhhhhHHhcCchHHHHHHH
Confidence            9999999999999999998654443


No 56 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.84  E-value=2.3e-20  Score=195.96  Aligned_cols=230  Identities=25%  Similarity=0.227  Sum_probs=157.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCC
Q 005790           29 PIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYG  108 (677)
Q Consensus        29 pL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G  108 (677)
                      -+.-|+..|.++-|+.||..|+++|.            ...++.|++|.++...+.+++++|++    +|++||..|..|
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~~------------~n~DglTalhq~~id~~~e~v~~l~e----~ga~Vn~~d~e~  106 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPNL------------CNVDGLTALHQACIDDNLEMVKFLVE----NGANVNAQDNEG  106 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCccc------------cCCccchhHHHHHhcccHHHHHHHHH----hcCCcccccccc
Confidence            35677888899999999988877643            34556666666666666666666666    666666666666


Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHh-cCCCcccccccCCcchhhhhcch
Q 005790          109 GWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYD-FAVSPRFLTAKGGELEEHIEEIP  187 (677)
Q Consensus       109 ~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~-~Gad~~~~~~~~~~~~~~~~~~~  187 (677)
                      +||||.|+.+|++.+|++|+..|+.. ...+..|..|+..+- ..-..+++..-.. .|++++..-.             
T Consensus       107 wtPlhaaascg~~~i~~~li~~gA~~-~avNsdg~~P~dl~e-~ea~~~~l~~~~~r~gi~iea~R~-------------  171 (527)
T KOG0505|consen  107 WTPLHAAASCGYLNIVEYLIQHGANL-LAVNSDGNMPYDLAE-DEATLDVLETEMARQGIDIEAARK-------------  171 (527)
T ss_pred             CCcchhhcccccHHHHHHHHHhhhhh-hhccCCCCCcccccc-CcchhHHHHHHHHHhcccHHHHhh-------------
Confidence            66666666666666666666666532 233444545544431 1112222221111 1111100000             


Q ss_pred             hhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 005790          188 SVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLH  267 (677)
Q Consensus       188 ~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~  267 (677)
                           ...++-|         .-++..+..|... +.++..|.|.||.|+.+|..++.++|+++|.+++..|.+|+||||
T Consensus       172 -----~~e~~ml---------~D~~q~l~~G~~~-d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlH  236 (527)
T KOG0505|consen  172 -----AEEQTML---------DDARQWLNAGAEL-DARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLH  236 (527)
T ss_pred             -----hhHHHHH---------HHHHHHHhccccc-cccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCccc
Confidence                 0001111         2233344477776 777777999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhh
Q 005790          268 IAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS  305 (677)
Q Consensus       268 ~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~  305 (677)
                      .|+.-|+.+++++|+++| ++.+..+..|.||+.+|..
T Consensus       237 AAA~Wg~~~~~elL~~~g-a~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  237 AAAHWGQEDACELLVEHG-ADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             HHHHhhhHhHHHHHHHhh-cccchhhhcCCCCccchhh
Confidence            999999999999999999 7899999999999999985


No 57 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.83  E-value=6.2e-20  Score=175.00  Aligned_cols=140  Identities=19%  Similarity=0.259  Sum_probs=88.7

Q ss_pred             cCCCCCCcHHHHHHHhCCH----HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH---HHHHHHhCCCCccccCCCC
Q 005790          224 YRDKQGSTILHAAAGRGQV----EVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAV---VEALILASPSMISVKNTSG  296 (677)
Q Consensus       224 ~~d~~g~TpL~~A~~~g~~----eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~i---v~~LL~~g~~~~~~~~~~g  296 (677)
                      ..+..+.++||.||+.|+.    +++++|++.|++++..|..|+||||+|+..|+.++   +++|++.| ++        
T Consensus        15 ~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-ad--------   85 (166)
T PHA02743         15 EIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG-AD--------   85 (166)
T ss_pred             hhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC-CC--------
Confidence            3445555666666666665    44455566666666666666666666666665443   55555555 22        


Q ss_pred             CchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccC-CCCchHHHHHHhCCCcHHHHHHHhhCCCCCcccc
Q 005790          297 ETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKN-NDGRTALHMAITGNVHLELVQLLMSAPSINVNVR  375 (677)
Q Consensus       297 ~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d-~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~  375 (677)
                                                              +|.++ ..|.||||+|+..+ +.+++++|+...|++++.+
T Consensus        86 ----------------------------------------in~~d~~~g~TpLh~A~~~g-~~~iv~~Ll~~~gad~~~~  124 (166)
T PHA02743         86 ----------------------------------------INARELGTGNTLLHIAASTK-NYELAEWLCRQLGVNLGAI  124 (166)
T ss_pred             ----------------------------------------CCCCCCCCCCcHHHHHHHhC-CHHHHHHHHhccCCCccCc
Confidence                                                    44445 35677777777766 7777777773257777777


Q ss_pred             CCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCC
Q 005790          376 DNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSAR  417 (677)
Q Consensus       376 d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~  417 (677)
                      |..|.||||+|+..++.+    ++++|+++|++++.++..|.
T Consensus       125 d~~g~tpL~~A~~~~~~~----iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743        125 NYQHETAYHIAYKMRDRR----MMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCCCcccCCc
Confidence            777777777777777655    56777777777776665553


No 58 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.81  E-value=2.5e-19  Score=170.83  Aligned_cols=148  Identities=13%  Similarity=0.044  Sum_probs=118.4

Q ss_pred             hcCCCCchhhcCCCChHHHHHHHcCCH----HHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHH---HHHHHHhcCC
Q 005790           95 SKNGKNSLIRAGYGGWLLYTAASAGDL----GFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCD---VFRLIYDFAV  167 (677)
Q Consensus        95 ~~~g~~~~~~d~~G~t~L~~Aa~~g~~----eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~e---vv~lLl~~Ga  167 (677)
                      -.++++++..+..+.++||+||+.|++    +++++|++.++ .++..|..|+||||+|| ..|+.+   ++++|+++|+
T Consensus         7 ~~~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~-~~~~~d~~g~t~Lh~Aa-~~g~~~~~~~i~~Ll~~Ga   84 (166)
T PHA02743          7 AGNNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGH-LLHRYDHHGRQCTHMVA-WYDRANAVMKIELLVNMGA   84 (166)
T ss_pred             cccchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcch-hhhccCCCCCcHHHHHH-HhCccCHHHHHHHHHHcCC
Confidence            346788888899999999999999998    56667777775 56677889999999986 546544   4788999998


Q ss_pred             CcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHh-cCCCccccCCCCCCcHHHHHHHhCCHHHHH
Q 005790          168 SPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLE-NCTDVLTYRDKQGSTILHAAAGRGQVEVVK  246 (677)
Q Consensus       168 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~-~ga~~~~~~d~~g~TpL~~A~~~g~~eivk  246 (677)
                      +++..+..                  .|+||||+|+..|+.+++++|+. .|+++ +..+..|.||||+|+..++.++++
T Consensus        85 din~~d~~------------------~g~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~~g~tpL~~A~~~~~~~iv~  145 (166)
T PHA02743         85 DINARELG------------------TGNTLLHIAASTKNYELAEWLCRQLGVNL-GAINYQHETAYHIAYKMRDRRMME  145 (166)
T ss_pred             CCCCCCCC------------------CCCcHHHHHHHhCCHHHHHHHHhccCCCc-cCcCCCCCCHHHHHHHcCCHHHHH
Confidence            88765421                  13688888888888888888885 78887 668888888888888888888888


Q ss_pred             HHHhcCCCCCCCCCCCC
Q 005790          247 DLIASFDIINSTDHQGN  263 (677)
Q Consensus       247 ~Ll~~ga~in~~d~~g~  263 (677)
                      +|+++|++++.++..|.
T Consensus       146 ~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743        146 ILRANGAVCDDPLSIGL  162 (166)
T ss_pred             HHHHcCCCCCCcccCCc
Confidence            88888888888876653


No 59 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.80  E-value=8.9e-19  Score=180.23  Aligned_cols=159  Identities=15%  Similarity=0.095  Sum_probs=125.3

Q ss_pred             cCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHh
Q 005790          137 GEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLE  216 (677)
Q Consensus       137 ~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~  216 (677)
                      ..|..|.|+++++|++.|+.+++++|+++|++++..+..               .+..|.||||+|+..++.+++++|++
T Consensus        27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~---------------sd~~g~TpLh~Aa~~~~~eivklLL~   91 (300)
T PHA02884         27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPL---------------SENSKTNPLIYAIDCDNDDAAKLLIR   91 (300)
T ss_pred             ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcc---------------cCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            367888899888888989999999999999998865320               01124789999999999999999999


Q ss_pred             cCCCcccc-CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCC
Q 005790          217 NCTDVLTY-RDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTS  295 (677)
Q Consensus       217 ~ga~~~~~-~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~  295 (677)
                      +|+++ +. .+..|.||||+|+..++.+++++|+++|++++..|..|.||||+|+..++.+++..+...      ..+..
T Consensus        92 ~GADV-N~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~------~~~~~  164 (300)
T PHA02884         92 YGADV-NRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN------EISNF  164 (300)
T ss_pred             cCCCc-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC------ccccc
Confidence            99998 55 356799999999999999999999999999999999999999999998888887665421      14566


Q ss_pred             CCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccc
Q 005790          296 GETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQI  330 (677)
Q Consensus       296 g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~  330 (677)
                      +.+|++++.             +.+++++|+++..
T Consensus       165 ~~~~~~~~~-------------n~ei~~~Lish~v  186 (300)
T PHA02884        165 YKHPKKILI-------------NFDILKILVSHFI  186 (300)
T ss_pred             ccChhhhhc-------------cHHHHHHHHHHHH
Confidence            677777642             2456666666553


No 60 
>PHA02741 hypothetical protein; Provisional
Probab=99.78  E-value=1.3e-18  Score=166.54  Aligned_cols=131  Identities=24%  Similarity=0.404  Sum_probs=97.0

Q ss_pred             cCCCCCCcHHHHHHHhCCHHHHHHHHh------cCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHHhCCCCccccC
Q 005790          224 YRDKQGSTILHAAAGRGQVEVVKDLIA------SFDIINSTDHQGNTPLHIAAYRGQ----PAVVEALILASPSMISVKN  293 (677)
Q Consensus       224 ~~d~~g~TpL~~A~~~g~~eivk~Ll~------~ga~in~~d~~g~tpL~~A~~~g~----~~iv~~LL~~g~~~~~~~~  293 (677)
                      .++..|.||||+|+..|+.+++++|+.      .|++++.+|..|.||||+|+..|+    .+++++|++.|+       
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ga-------   88 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGA-------   88 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCC-------
Confidence            456677788888888888888877753      356777777777777777777777    366666666552       


Q ss_pred             CCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCC-CCchHHHHHHhCCCcHHHHHHHhhCCCCCc
Q 005790          294 TSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNN-DGRTALHMAITGNVHLELVQLLMSAPSINV  372 (677)
Q Consensus       294 ~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~-~G~TpLh~A~~~~~~~eiv~lLL~~~Gadi  372 (677)
                                                                ++|.++. .|.||||+|+..+ +.+++++|+...|+++
T Consensus        89 ------------------------------------------din~~~~~~g~TpLh~A~~~~-~~~iv~~Ll~~~g~~~  125 (169)
T PHA02741         89 ------------------------------------------DINAQEMLEGDTALHLAAHRR-DHDLAEWLCCQPGIDL  125 (169)
T ss_pred             ------------------------------------------CCCCCCcCCCCCHHHHHHHcC-CHHHHHHHHhCCCCCC
Confidence                                                      2555564 7888888888887 8899999986358899


Q ss_pred             cccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCC
Q 005790          373 NVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGI  408 (677)
Q Consensus       373 n~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gad  408 (677)
                      +..|..|+||||+|+..++.+    ++++|++.++-
T Consensus       126 ~~~n~~g~tpL~~A~~~~~~~----iv~~L~~~~~~  157 (169)
T PHA02741        126 HFCNADNKSPFELAIDNEDVA----MMQILREIVAT  157 (169)
T ss_pred             CcCCCCCCCHHHHHHHCCCHH----HHHHHHHHHHH
Confidence            988889999999999988876    45555555443


No 61 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.77  E-value=3.7e-18  Score=154.03  Aligned_cols=146  Identities=24%  Similarity=0.300  Sum_probs=120.6

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 005790          197 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPA  276 (677)
Q Consensus       197 t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~  276 (677)
                      ..+.+|+..+.+..|+.||+..++..+.+|.+|.||||.|+.+|+.+||+.|+..||+++.+...|+||||.||.-.+.+
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence            46789999999999999999999988999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCC
Q 005790          277 VVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNV  356 (677)
Q Consensus       277 iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~  356 (677)
                      ++-+||++| ++++.....                                                ..||||+||....
T Consensus       145 va~~LLqhg-aDVnA~t~g------------------------------------------------~ltpLhlaa~~rn  175 (228)
T KOG0512|consen  145 VAGRLLQHG-ADVNAQTKG------------------------------------------------LLTPLHLAAGNRN  175 (228)
T ss_pred             HHHHHHhcc-Ccccccccc------------------------------------------------cchhhHHhhcccc
Confidence            999999999 555554444                                                4455555554443


Q ss_pred             cHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCC
Q 005790          357 HLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQ  391 (677)
Q Consensus       357 ~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~  391 (677)
                      ....+.+|+...++++...+..+.||+++|...+-
T Consensus       176 ~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~  210 (228)
T KOG0512|consen  176 SRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM  210 (228)
T ss_pred             hHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence            55666666665677777777777777777766543


No 62 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.77  E-value=4.3e-18  Score=175.16  Aligned_cols=148  Identities=17%  Similarity=0.144  Sum_probs=125.4

Q ss_pred             chHHHHHHhcCCHHHHHHHHhcCCCccccC----CCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCC-CCCCCcHHHHHH
Q 005790          196 NRAVHAAARGGNLKILKELLENCTDVLTYR----DKQGSTILHAAAGRGQVEVVKDLIASFDIINST-DHQGNTPLHIAA  270 (677)
Q Consensus       196 ~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~----d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~-d~~g~tpL~~A~  270 (677)
                      .++||.|+..|+.+++++|+++|+++ +.+    +..|.||||+|+..++.+++++|+++|++++.. +..|.||||+|+
T Consensus        34 ~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa  112 (300)
T PHA02884         34 ANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISV  112 (300)
T ss_pred             CHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHH
Confidence            46888899999999999999999999 555    468999999999999999999999999999986 467999999999


Q ss_pred             HcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHH
Q 005790          271 YRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHM  350 (677)
Q Consensus       271 ~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~  350 (677)
                      ..++.+++++|++.| ++++.++..|.||||+|+..++..          ++..+..          +..+..+.+|+++
T Consensus       113 ~~~~~eivklLL~~G-Adin~kd~~G~TpL~~A~~~~~~~----------~~~~~~~----------~~~~~~~~~~~~~  171 (300)
T PHA02884        113 LHGCLKCLEILLSYG-ADINIQTNDMVTPIELALMICNNF----------LAFMICD----------NEISNFYKHPKKI  171 (300)
T ss_pred             HcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHhCChh----------HHHHhcC----------CcccccccChhhh
Confidence            999999999999999 789999999999999999854443          2222221          1236678889987


Q ss_pred             HHhCCCcHHHHHHHhhCCCC
Q 005790          351 AITGNVHLELVQLLMSAPSI  370 (677)
Q Consensus       351 A~~~~~~~eiv~lLL~~~Ga  370 (677)
                      +   + +.+++++|++ +++
T Consensus       172 ~---~-n~ei~~~Lis-h~v  186 (300)
T PHA02884        172 L---I-NFDILKILVS-HFI  186 (300)
T ss_pred             h---c-cHHHHHHHHH-HHH
Confidence            6   3 7899999999 776


No 63 
>PHA02741 hypothetical protein; Provisional
Probab=99.76  E-value=8.3e-18  Score=160.97  Aligned_cols=129  Identities=19%  Similarity=0.197  Sum_probs=73.1

Q ss_pred             hhcCCCChHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCC
Q 005790          103 IRAGYGGWLLYTAASAGDLGFVKQLLDKN-----PLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGG  177 (677)
Q Consensus       103 ~~d~~G~t~L~~Aa~~g~~eivk~LL~~g-----~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~  177 (677)
                      .++..|.||||+|+..|+.++|+.|+...     ...++..|..|.||||+|                            
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A----------------------------   67 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIA----------------------------   67 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHH----------------------------
Confidence            35566777777777777777777765421     113444455555555555                            


Q ss_pred             cchhhhhcchhhhhhhccchHHHHHHhcCC----HHHHHHHHhcCCCccccCCC-CCCcHHHHHHHhCCHHHHHHHHh-c
Q 005790          178 ELEEHIEEIPSVYKWEMMNRAVHAAARGGN----LKILKELLENCTDVLTYRDK-QGSTILHAAAGRGQVEVVKDLIA-S  251 (677)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~----~eivk~LL~~ga~~~~~~d~-~g~TpL~~A~~~g~~eivk~Ll~-~  251 (677)
                                               +..|+    .+++++|++.|+++ +.++. .|+||||+|+..++.+++++|+. .
T Consensus        68 -------------------------~~~g~~~~~~~ii~~Ll~~gadi-n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~  121 (169)
T PHA02741         68 -------------------------AEKHEAQLAAEIIDHLIELGADI-NAQEMLEGDTALHLAAHRRDHDLAEWLCCQP  121 (169)
T ss_pred             -------------------------HHcCChHHHHHHHHHHHHcCCCC-CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence                                     44444    34555555555555 33442 55566666666666666666554 3


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 005790          252 FDIINSTDHQGNTPLHIAAYRGQPAVVEALILAS  285 (677)
Q Consensus       252 ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g  285 (677)
                      |++++..|..|.||||+|+..++.+++++|++.+
T Consensus       122 g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~  155 (169)
T PHA02741        122 GIDLHFCNADNKSPFELAIDNEDVAMMQILREIV  155 (169)
T ss_pred             CCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence            5555555555666666666666666666555543


No 64 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.75  E-value=3.3e-18  Score=161.26  Aligned_cols=136  Identities=21%  Similarity=0.251  Sum_probs=95.1

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHhCC------CCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHccc
Q 005790          256 NSTDHQGNTPLHIAAYRGQPAVVEALILASP------SMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQ  329 (677)
Q Consensus       256 n~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~------~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~  329 (677)
                      +..|..|.||||+|++.|+.  +++++..+.      ..++..|..|.||||+|+..+..+       ..+++++|++.+
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~-------~~e~v~~Ll~~g   81 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKAD-------PQEKLKLLMEWG   81 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchh-------HHHHHHHHHHcC
Confidence            34455666666666666652  222221110      112345667777777777654321       234556665554


Q ss_pred             ccchhhhhhccC-CCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCC
Q 005790          330 IFNMEDIINAKN-NDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGI  408 (677)
Q Consensus       330 ~~~~~~~in~~d-~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gad  408 (677)
                           +++|.++ ..|.||||+|+..+ +.+++++|+...|++++.+|..|+||||+|+..++.+    ++++|+++|++
T Consensus        82 -----adin~~~~~~g~T~Lh~A~~~~-~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~----i~~~Ll~~ga~  151 (154)
T PHA02736         82 -----ADINGKERVFGNTPLHIAVYTQ-NYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAK----MMNILRAKGAQ  151 (154)
T ss_pred             -----CCccccCCCCCCcHHHHHHHhC-CHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHH----HHHHHHHcCCC
Confidence                 4477787 48999999999988 9999999997459999999999999999999999876    68889999988


Q ss_pred             CC
Q 005790          409 FG  410 (677)
Q Consensus       409 in  410 (677)
                      ++
T Consensus       152 ~~  153 (154)
T PHA02736        152 CK  153 (154)
T ss_pred             CC
Confidence            75


No 65 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.73  E-value=1.7e-17  Score=156.37  Aligned_cols=134  Identities=15%  Similarity=0.074  Sum_probs=70.5

Q ss_pred             CchhhcCCCChHHHHHHHcCCHHHHHHHHHcCC------CccccCCCCCCCHHHHHHHhcCCH---HHHHHHHhcCCCcc
Q 005790          100 NSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNP------LLVFGEGEYGVTDIFYAAARSKNC---DVFRLIYDFAVSPR  170 (677)
Q Consensus       100 ~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~------~~~~~~~~~g~tpL~~AA~~~g~~---evv~lLl~~Gad~~  170 (677)
                      ..+.+|..|.||||+||..|+.  +.+++..+.      ..+...+..|.||||+|| ..|+.   +++++|+++|++++
T Consensus         9 ~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~-~~~~~~~~e~v~~Ll~~gadin   85 (154)
T PHA02736          9 FASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVS-NPDKADPQEKLKLLMEWGADIN   85 (154)
T ss_pred             HHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeec-ccCchhHHHHHHHHHHcCCCcc
Confidence            3455677888899988888873  333332221      112234556666666664 44443   34555555555554


Q ss_pred             cccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHh-cCCCccccCCCCCCcHHHHHHHhCCHHHHHHHH
Q 005790          171 FLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLE-NCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLI  249 (677)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~-~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll  249 (677)
                      ..+..                  .|+||||+|+..|+.+++++|+. .|+++ +..+..|.||||+|+..|+.+++++|+
T Consensus        86 ~~~~~------------------~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~-n~~~~~g~tpL~~A~~~~~~~i~~~Ll  146 (154)
T PHA02736         86 GKERV------------------FGNTPLHIAVYTQNYELATWLCNQPGVNM-EILNYAFKTPYYVACERHDAKMMNILR  146 (154)
T ss_pred             ccCCC------------------CCCcHHHHHHHhCCHHHHHHHHhCCCCCC-ccccCCCCCHHHHHHHcCCHHHHHHHH
Confidence            33211                  12455555555555555555554 24444 445555555555555555555555555


Q ss_pred             hcCCCC
Q 005790          250 ASFDII  255 (677)
Q Consensus       250 ~~ga~i  255 (677)
                      ++|+++
T Consensus       147 ~~ga~~  152 (154)
T PHA02736        147 AKGAQC  152 (154)
T ss_pred             HcCCCC
Confidence            555543


No 66 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.72  E-value=6.9e-17  Score=145.90  Aligned_cols=142  Identities=24%  Similarity=0.221  Sum_probs=110.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhh
Q 005790          111 LLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVY  190 (677)
Q Consensus       111 ~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~  190 (677)
                      .+.+|+..+.+..|+.||+..+..++.+|.+|+||||.|+ ++|+.+||+.|+..||+++.....|              
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAa-Yn~h~div~~ll~~gAn~~a~T~~G--------------  130 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAA-YNGHLDIVHELLLSGANKEAKTNEG--------------  130 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHH-hcCchHHHHHHHHccCCcccccccC--------------
Confidence            4778999999999999999999999999999999999984 8888888888888888877665543              


Q ss_pred             hhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCC-HHHHHHHHh-cCCCCCCCCCCCCcHHHH
Q 005790          191 KWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQ-VEVVKDLIA-SFDIINSTDHQGNTPLHI  268 (677)
Q Consensus       191 ~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~-~eivk~Ll~-~ga~in~~d~~g~tpL~~  268 (677)
                           +||||-||...+.+++-+||++|+|+ +......+||||+||...+ ...+.+|+. .+..+...+..+.||+.+
T Consensus       131 -----WTPLhSAckWnN~~va~~LLqhgaDV-nA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~i  204 (228)
T KOG0512|consen  131 -----WTPLHSACKWNNFEVAGRLLQHGADV-NAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDI  204 (228)
T ss_pred             -----ccchhhhhcccchhHHHHHHhccCcc-cccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHH
Confidence                 67888888888888888888888877 6666677788887776554 344555543 556666667777777777


Q ss_pred             HHHcC
Q 005790          269 AAYRG  273 (677)
Q Consensus       269 A~~~g  273 (677)
                      |-+.+
T Consensus       205 ARRT~  209 (228)
T KOG0512|consen  205 ARRTS  209 (228)
T ss_pred             HHHhh
Confidence            77665


No 67 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.70  E-value=1.1e-17  Score=162.16  Aligned_cols=156  Identities=30%  Similarity=0.353  Sum_probs=126.0

Q ss_pred             HhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 005790          203 ARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALI  282 (677)
Q Consensus       203 ~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL  282 (677)
                      |+.|+.--|++.|+.-...++..|..|.+|||+||+.|+..+|+.|+..|+.+|..+....||||+|+.+|+.++|+.||
T Consensus         8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll   87 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLL   87 (448)
T ss_pred             hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHH
Confidence            44555444555555444444888999999999999999999999999999999999998899999999999999999999


Q ss_pred             HhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHH
Q 005790          283 LASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQ  362 (677)
Q Consensus       283 ~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~  362 (677)
                      +..+ +                                                +|..+..|.|||||||..| ...+.+
T Consensus        88 ~~ka-d------------------------------------------------vnavnehgntplhyacfwg-ydqiae  117 (448)
T KOG0195|consen   88 SRKA-D------------------------------------------------VNAVNEHGNTPLHYACFWG-YDQIAE  117 (448)
T ss_pred             HHhc-c------------------------------------------------cchhhccCCCchhhhhhhc-HHHHHH
Confidence            8772 2                                                6677888999999999998 999999


Q ss_pred             HHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCc
Q 005790          363 LLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQD  413 (677)
Q Consensus       363 lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d  413 (677)
                      -|+. .||.+++.+.+|+|||..|.-.-    -+.|.+.--++|-.+|...
T Consensus       118 dli~-~ga~v~icnk~g~tpldkakp~l----~~~l~e~aek~gq~~nrip  163 (448)
T KOG0195|consen  118 DLIS-CGAAVNICNKKGMTPLDKAKPML----KNTLLEIAEKHGQSPNRIP  163 (448)
T ss_pred             HHHh-ccceeeecccCCCCchhhhchHH----HHHHHHHHHHhCCCCCccc
Confidence            9999 99999999999999999874321    2235555567787777543


No 68 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.69  E-value=3.8e-16  Score=171.86  Aligned_cols=240  Identities=18%  Similarity=0.142  Sum_probs=177.1

Q ss_pred             ccHHHHHhhchHHHHHHHHhhhhc-----CCCCchhhcCCCChHHHHHHH---cCCHHHHHHHHHcCCCcccc----CCC
Q 005790           73 EQFDDVAKCRSKVARKLFLECKSK-----NGKNSLIRAGYGGWLLYTAAS---AGDLGFVKQLLDKNPLLVFG----EGE  140 (677)
Q Consensus        73 ~~l~~A~~~~~~~v~~lLl~~~~~-----~g~~~~~~d~~G~t~L~~Aa~---~g~~eivk~LL~~g~~~~~~----~~~  140 (677)
                      ..+..+...+......-|.....+     ..-+++.+...|.|.||.|..   .++.++++.||+..+..++.    ..-
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY  182 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY  182 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence            445555555554444444432211     124667778889999999997   45679999999998765553    345


Q ss_pred             CCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhh----hcchhhhhhhccchHHHHHHhcCCHHHHHHHHh
Q 005790          141 YGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHI----EEIPSVYKWEMMNRAVHAAARGGNLKILKELLE  216 (677)
Q Consensus       141 ~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~----~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~  216 (677)
                      +|.||||+| +.+.+.++|++|++.|||++..........+..    ...+.......|..||-+||..++.|++++|++
T Consensus       183 ~GqSaLHiA-Iv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  183 YGQSALHIA-IVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             cCcchHHHH-HHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            699999998 566999999999999999996543211110000    111112224567899999999999999999999


Q ss_pred             cCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHHh-CCC------
Q 005790          217 NCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDI--INSTDHQGNTPLHIAAYRGQPAVVEALILA-SPS------  287 (677)
Q Consensus       217 ~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~--in~~d~~g~tpL~~A~~~g~~~iv~~LL~~-g~~------  287 (677)
                      +|+|+ +.+|..|+|.||..+..-..++..+++++|++  ...++.+|.|||.+|++-|..++.+.+++. ...      
T Consensus       262 ~gAd~-~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGp  340 (782)
T KOG3676|consen  262 HGADP-NAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGP  340 (782)
T ss_pred             cCCCC-CccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecc
Confidence            99999 89999999999999999999999999999999  888999999999999999999999999998 211      


Q ss_pred             ------CccccCC--CCCchhhhhhhcCchHHHHH
Q 005790          288 ------MISVKNT--SGETFLHSAVSGFQTYAFRR  314 (677)
Q Consensus       288 ------~~~~~~~--~g~tpLh~A~~~~~~~~~~~  314 (677)
                            +.+..|.  +..++|...+.+...+....
T Consensus       341 vtsslYpL~~iDT~~n~~SvLeivvyg~~~eHl~L  375 (782)
T KOG3676|consen  341 VTSSLYPLNSIDTIGNENSVLEIVVYGIKNEHLEL  375 (782)
T ss_pred             cccccccchhcccccchhhhhhhhhcCCcHHHHHH
Confidence                  1122222  45678888887744433333


No 69 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.65  E-value=2.7e-16  Score=152.54  Aligned_cols=159  Identities=25%  Similarity=0.274  Sum_probs=125.3

Q ss_pred             HHhCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHh
Q 005790          237 AGRGQVEVVKDLI-ASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRL  315 (677)
Q Consensus       237 ~~~g~~eivk~Ll-~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L  315 (677)
                      |+.|+.--|++-| +...|.|.-|..|.+|||+|++.|+..+++.||..|+.                            
T Consensus         8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgar----------------------------   59 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR----------------------------   59 (448)
T ss_pred             hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccc----------------------------
Confidence            3344433333333 34557777888888888888888888888888888832                            


Q ss_pred             hHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchH
Q 005790          316 DRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASS  395 (677)
Q Consensus       316 ~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~  395 (677)
                                           +|..+....||||+|+..| |-++|+.||+ ..+|+|+.+..|+|||||||.+|...  
T Consensus        60 ---------------------vn~tnmgddtplhlaaahg-hrdivqkll~-~kadvnavnehgntplhyacfwgydq--  114 (448)
T KOG0195|consen   60 ---------------------VNSTNMGDDTPLHLAAAHG-HRDIVQKLLS-RKADVNAVNEHGNTPLHYACFWGYDQ--  114 (448)
T ss_pred             ---------------------cccccCCCCcchhhhhhcc-cHHHHHHHHH-HhcccchhhccCCCchhhhhhhcHHH--
Confidence                                 6666777789999999988 9999999999 99999999999999999999999855  


Q ss_pred             HHHHHHHHHcCCCCCCCcccCCchHHHHHHHhCCCCCCCCccchhhHHHHHHcCCCCCCCCCCCC
Q 005790          396 DILIRHLISAGGIFGCQDYSARRAIASHIKMLGNGSSPGTSFRISDTEIFLYTGIDVSSDGNANS  460 (677)
Q Consensus       396 ~~lv~~Ll~~Gadin~~d~~G~T~L~~al~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~~~~g~  460 (677)
                        +.+-|+..||-++.-+++|.|||..|-.+..          ..+.++--++|-+++.....+.
T Consensus       115 --iaedli~~ga~v~icnk~g~tpldkakp~l~----------~~l~e~aek~gq~~nripfkdt  167 (448)
T KOG0195|consen  115 --IAEDLISCGAAVNICNKKGMTPLDKAKPMLK----------NTLLEIAEKHGQSPNRIPFKDT  167 (448)
T ss_pred             --HHHHHHhccceeeecccCCCCchhhhchHHH----------HHHHHHHHHhCCCCCccccccc
Confidence              7899999999999999999999987654422          3345555678999886554443


No 70 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.65  E-value=1.2e-15  Score=167.86  Aligned_cols=199  Identities=22%  Similarity=0.164  Sum_probs=158.9

Q ss_pred             CchhhcCCCChHHHHHHHcCCHHHHHHHHHcC--------CCccccCCCCCCCHHHHHHH--hcCCHHHHHHHHhcCCCc
Q 005790          100 NSLIRAGYGGWLLYTAASAGDLGFVKQLLDKN--------PLLVFGEGEYGVTDIFYAAA--RSKNCDVFRLIYDFAVSP  169 (677)
Q Consensus       100 ~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g--------~~~~~~~~~~g~tpL~~AA~--~~g~~evv~lLl~~Gad~  169 (677)
                      .++..+...+.++..|...+.++....|+..+        ...++.++.-|.|.||.|..  ..++.++++.|++.-  |
T Consensus        93 ~p~~l~~~d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~--p  170 (782)
T KOG3676|consen   93 GPNILKRFDRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIF--P  170 (782)
T ss_pred             CcchhhhcchhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHh--H
Confidence            33434434447889999999999988888765        24566778889999999876  567789999999852  2


Q ss_pred             ccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCcccc--------C--------------CC
Q 005790          170 RFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTY--------R--------------DK  227 (677)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~--------~--------------d~  227 (677)
                      ....            .........|+||||+|+.+.+.++|++|++.|||+...        .              -.
T Consensus       171 ~lin------------d~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~Y  238 (782)
T KOG3676|consen  171 KLIN------------DIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFY  238 (782)
T ss_pred             HHhh------------hhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceee
Confidence            2211            122234456899999999999999999999999998311        1              12


Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCC--ccccCCCCCchhhhhhh
Q 005790          228 QGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSM--ISVKNTSGETFLHSAVS  305 (677)
Q Consensus       228 ~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~--~~~~~~~g~tpLh~A~~  305 (677)
                      .|..||-+||..++.+++++|+++|||++.+|..|+|.||..+..-..++..+++++| +.  ...+|..|.|||.+|+.
T Consensus       239 fGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~g-a~~l~~v~N~qgLTPLtLAak  317 (782)
T KOG3676|consen  239 FGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELG-ANALEHVRNNQGLTPLTLAAK  317 (782)
T ss_pred             eccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcC-CCccccccccCCCChHHHHHH
Confidence            4789999999999999999999999999999999999999999999999999999998 45  77899999999999999


Q ss_pred             cCchHHHH
Q 005790          306 GFQTYAFR  313 (677)
Q Consensus       306 ~~~~~~~~  313 (677)
                      -|..++++
T Consensus       318 lGk~emf~  325 (782)
T KOG3676|consen  318 LGKKEMFQ  325 (782)
T ss_pred             hhhHHHHH
Confidence            44444433


No 71 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.63  E-value=1.8e-15  Score=128.40  Aligned_cols=89  Identities=44%  Similarity=0.606  Sum_probs=80.7

Q ss_pred             HHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 005790          199 VHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVV  278 (677)
Q Consensus       199 Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv  278 (677)
                      ||+|++.|+.+++++|++.+.++ +.    |.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~-~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~   75 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADI-NL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV   75 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTT-TS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCC-CC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence            79999999999999999999887 33    88999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCccccC
Q 005790          279 EALILASPSMISVKN  293 (677)
Q Consensus       279 ~~LL~~g~~~~~~~~  293 (677)
                      ++|+++| .+++.+|
T Consensus        76 ~~Ll~~g-~~~~~~n   89 (89)
T PF12796_consen   76 KLLLEHG-ADVNIRN   89 (89)
T ss_dssp             HHHHHTT-T-TTSS-
T ss_pred             HHHHHcC-CCCCCcC
Confidence            9999998 5666543


No 72 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.59  E-value=8.3e-15  Score=124.31  Aligned_cols=89  Identities=40%  Similarity=0.583  Sum_probs=53.8

Q ss_pred             HHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHH
Q 005790          233 LHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAF  312 (677)
Q Consensus       233 L~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~  312 (677)
                      ||+||+.|+++++++|++.+.+++.    |.||||+|+..|+.+++++|++.|. +                        
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~-~------------------------   51 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGA-D------------------------   51 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTT-C------------------------
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcc-c------------------------
Confidence            5666666666666666666665555    5566666666666666666666552 1                        


Q ss_pred             HHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccC
Q 005790          313 RRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRD  376 (677)
Q Consensus       313 ~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d  376 (677)
                                              ++.+|..|.||||+|+..+ +.+++++|++ .|+++|.+|
T Consensus        52 ------------------------~~~~~~~g~t~L~~A~~~~-~~~~~~~Ll~-~g~~~~~~n   89 (89)
T PF12796_consen   52 ------------------------INSQDKNGNTALHYAAENG-NLEIVKLLLE-HGADVNIRN   89 (89)
T ss_dssp             ------------------------TT-BSTTSSBHHHHHHHTT-HHHHHHHHHH-TTT-TTSS-
T ss_pred             ------------------------ccccCCCCCCHHHHHHHcC-CHHHHHHHHH-cCCCCCCcC
Confidence                                    3444556666666666655 6666666666 566666553


No 73 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.56  E-value=8.7e-14  Score=124.66  Aligned_cols=85  Identities=46%  Similarity=0.640  Sum_probs=51.1

Q ss_pred             chHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCH
Q 005790          196 NRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQP  275 (677)
Q Consensus       196 ~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~  275 (677)
                      .+|||.|+..++.+++++|++.|+++ +..+..|.||+|+|+..++.+++++|++.|.+++..+..+.||+++|+..++.
T Consensus        41 ~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~  119 (126)
T cd00204          41 RTPLHLAAKNGHLEIVKLLLEKGADV-NARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHL  119 (126)
T ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCH
Confidence            35555555555555666666655544 44455566666666666666666666666666666666666666666666666


Q ss_pred             HHHHHH
Q 005790          276 AVVEAL  281 (677)
Q Consensus       276 ~iv~~L  281 (677)
                      +++++|
T Consensus       120 ~~~~~L  125 (126)
T cd00204         120 EVVKLL  125 (126)
T ss_pred             HHHHHh
Confidence            666655


No 74 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.54  E-value=9.7e-14  Score=124.36  Aligned_cols=120  Identities=37%  Similarity=0.490  Sum_probs=109.1

Q ss_pred             hccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 005790          193 EMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYR  272 (677)
Q Consensus       193 ~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~  272 (677)
                      ..|.||||+|+..++.+++++|++.+.+. +..+..|.||||+|+..++.+++++|++.|++++..+..|.||+|+|+..
T Consensus         5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~   83 (126)
T cd00204           5 EDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN   83 (126)
T ss_pred             cCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence            44689999999999999999999999987 77899999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHH
Q 005790          273 GQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRR  314 (677)
Q Consensus       273 g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~  314 (677)
                      ++.+++++|++.+ .+.+..+..+.||+++|+..++.+.+++
T Consensus        84 ~~~~~~~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~  124 (126)
T cd00204          84 GNLDVVKLLLKHG-ADVNARDKDGRTPLHLAAKNGHLEVVKL  124 (126)
T ss_pred             CcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCHHHHHH
Confidence            9999999999988 6688889999999999999655444443


No 75 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.46  E-value=2.2e-13  Score=110.60  Aligned_cols=105  Identities=24%  Similarity=0.312  Sum_probs=94.5

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 005790          197 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPA  276 (677)
Q Consensus       197 t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~  276 (677)
                      .-+.+++.+|.++-|+..+..|-+++.  -..|++|||+|+-.|+++++++|+..|++++.+|+.|.|||-.|+..||.+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~--~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNE--IYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHH--HhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence            457899999999999999999988743  348999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCccccCCCCCchhhhhh
Q 005790          277 VVEALILASPSMISVKNTSGETFLHSAV  304 (677)
Q Consensus       277 iv~~LL~~g~~~~~~~~~~g~tpLh~A~  304 (677)
                      +|++||+.| ++-.....+|.+.+..+-
T Consensus        82 cVklLL~~G-Adrt~~~PdG~~~~eate  108 (117)
T KOG4214|consen   82 CVKLLLQNG-ADRTIHAPDGTALIEATE  108 (117)
T ss_pred             HHHHHHHcC-cccceeCCCchhHHhhcc
Confidence            999999999 667788888887766543


No 76 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.45  E-value=2.6e-12  Score=127.68  Aligned_cols=132  Identities=29%  Similarity=0.318  Sum_probs=119.1

Q ss_pred             ccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCC-----H
Q 005790          134 LVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGN-----L  208 (677)
Q Consensus       134 ~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~-----~  208 (677)
                      .....+..+.+++++++ ..+..+++++|++.|++++..+..|                   .||||+|+..++     .
T Consensus        65 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~g-------------------~t~l~~a~~~~~~~~~~~  124 (235)
T COG0666          65 HLAARDLDGRLPLHSAA-SKGDDKIVKLLLASGADVNAKDADG-------------------DTPLHLAALNGNPPEGNI  124 (235)
T ss_pred             ccccCCccccCHHHHHH-HcCcHHHHHHHHHcCCCcccccCCC-------------------CcHHHHHHhcCCcccchH
Confidence            34456677889999985 6699999999999999987666554                   689999999999     9


Q ss_pred             HHHHHHHhcCC--CccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 005790          209 KILKELLENCT--DVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILAS  285 (677)
Q Consensus       209 eivk~LL~~ga--~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g  285 (677)
                      +++++|++.|+  ++.+..+..|.||||+|+..|+.+++++|++.|++++..+..|.|++++|+..++.+++..++..+
T Consensus       125 ~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         125 EVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             HHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999  676888999999999999999999999999999999999999999999999999999999999875


No 77 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.44  E-value=1.8e-12  Score=128.78  Aligned_cols=132  Identities=35%  Similarity=0.528  Sum_probs=114.4

Q ss_pred             ccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHHhCCCCccccCCCCC
Q 005790          223 TYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQ-----PAVVEALILASPSMISVKNTSGE  297 (677)
Q Consensus       223 ~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~-----~~iv~~LL~~g~~~~~~~~~~g~  297 (677)
                      ...+..+.++++.++..+..+++++|+..|++++..+..|.||||+|+..++     .+++++|++.|..          
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~----------  136 (235)
T COG0666          67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD----------  136 (235)
T ss_pred             ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCC----------
Confidence            5567788999999999999999999999999999999999999999999999     8999999988842          


Q ss_pred             chhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCC
Q 005790          298 TFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDN  377 (677)
Q Consensus       298 tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~  377 (677)
                                                          ..+.+.+|..|.||||+|+..+ +.+++++|++ .|++++.++.
T Consensus       137 ------------------------------------~~~~~~~~~~g~tpl~~A~~~~-~~~~~~~ll~-~~~~~~~~~~  178 (235)
T COG0666         137 ------------------------------------LDVNNLRDEDGNTPLHWAALNG-DADIVELLLE-AGADPNSRNS  178 (235)
T ss_pred             ------------------------------------CCCccccCCCCCchhHHHHHcC-chHHHHHHHh-cCCCCccccc
Confidence                                                0114556888999999999988 8899999999 8999999999


Q ss_pred             CCCcHHHHHhhCCCCchHHHHHHHHHHcC
Q 005790          378 DGMTTLDLLKQRPQSASSDILIRHLISAG  406 (677)
Q Consensus       378 ~G~TpL~~A~~~~~~~~~~~lv~~Ll~~G  406 (677)
                      .|.|++++|+..++.+    +++.+++.+
T Consensus       179 ~g~t~l~~a~~~~~~~----~~~~l~~~~  203 (235)
T COG0666         179 YGVTALDPAAKNGRIE----LVKLLLDKG  203 (235)
T ss_pred             CCCcchhhhcccchHH----HHHHHHhcC
Confidence            9999999999999987    466666654


No 78 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35  E-value=2.7e-12  Score=134.08  Aligned_cols=120  Identities=25%  Similarity=0.274  Sum_probs=103.6

Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 005790          198 AVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAV  277 (677)
Q Consensus       198 ~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~i  277 (677)
                      .|.-|+..|.+++|+..+..-.|+ ...+..|.|+||-|+..||++||++||+.|+++|..|.+|+||||+|+..++..+
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~Dp-SqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~  631 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDP-SQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM  631 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCC-CCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence            455688999999999999988888 7789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHH
Q 005790          278 VEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLA  326 (677)
Q Consensus       278 v~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll  326 (677)
                      ++.|++.|++.....-.++.|+..-+-.        +-.+...+.++|.
T Consensus       632 ckqLVe~GaavfAsTlSDmeTa~eKCee--------~eeGY~~CsqyL~  672 (752)
T KOG0515|consen  632 CKQLVESGAAVFASTLSDMETAAEKCEE--------MEEGYDQCSQYLY  672 (752)
T ss_pred             HHHHHhccceEEeeecccccchhhhcch--------hhhhHHHHHHHHH
Confidence            9999999988777777788887765433        1245556666653


No 79 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.35  E-value=3.9e-12  Score=103.37  Aligned_cols=103  Identities=19%  Similarity=0.183  Sum_probs=88.8

Q ss_pred             HHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCcccc
Q 005790          145 DIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTY  224 (677)
Q Consensus       145 pL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~  224 (677)
                      .+.|+ +++|..+-|+-.+..|.++|..-                    .|++|||+|+..|.++++++|+..|+++ +.
T Consensus         5 ~~~W~-vkNG~~DeVk~~v~~g~nVn~~~--------------------ggR~plhyAAD~GQl~ilefli~iGA~i-~~   62 (117)
T KOG4214|consen    5 SVAWN-VKNGEIDEVKQSVNEGLNVNEIY--------------------GGRTPLHYAADYGQLSILEFLISIGANI-QD   62 (117)
T ss_pred             hHhhh-hccCcHHHHHHHHHccccHHHHh--------------------CCcccchHhhhcchHHHHHHHHHhcccc-CC
Confidence            35666 68899999988888887666332                    2579999999999999999999999999 88


Q ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 005790          225 RDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIA  269 (677)
Q Consensus       225 ~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A  269 (677)
                      +|.+|.|||..|+..||.++|++||+.|++-.....+|.+.+..+
T Consensus        63 kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   63 KDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             ccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            999999999999999999999999999999888888887665543


No 80 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.27  E-value=9e-12  Score=94.93  Aligned_cols=54  Identities=44%  Similarity=0.573  Sum_probs=36.8

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 005790          229 GSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALI  282 (677)
Q Consensus       229 g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL  282 (677)
                      |+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            567777777777777777777777777777777777777777777777777775


No 81 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.27  E-value=2.1e-11  Score=140.77  Aligned_cols=106  Identities=26%  Similarity=0.261  Sum_probs=96.9

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 005790          197 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPA  276 (677)
Q Consensus       197 t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~  276 (677)
                      ..|+.|+..|+.++++.|++.|+++ +..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence            5799999999999999999999998 788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHh-------CCCCccccCCCCCchhhhhh
Q 005790          277 VVEALILA-------SPSMISVKNTSGETFLHSAV  304 (677)
Q Consensus       277 iv~~LL~~-------g~~~~~~~~~~g~tpLh~A~  304 (677)
                      ++++|+.+       + ++.+..+..|.+|+..+.
T Consensus       163 iv~~Ll~~~~~~~~~g-a~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        163 VVQLLSRHSQCHFELG-ANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHhCCCcccccC-CCCCccccCCCCccchhh
Confidence            99999998       4 556667777777766554


No 82 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.24  E-value=2.6e-11  Score=139.97  Aligned_cols=107  Identities=22%  Similarity=0.237  Sum_probs=77.2

Q ss_pred             HHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHH
Q 005790          232 ILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYA  311 (677)
Q Consensus       232 pL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~  311 (677)
                      .|+.|+..|+.+++++|+++|+++|..|..|.||||+|+..|+.+++++|++.| ++++..|..|.||||+|+.      
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-advn~~d~~G~TpLh~A~~------  157 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFG-ADPTLLDKDGKTPLELAEE------  157 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHH------
Confidence            588999999999999999999999999999999999999999999999999998 5566666666666666665      


Q ss_pred             HHHhhHHHHHHHHHHccc--ccchhhhhhccCCCCchHHH
Q 005790          312 FRRLDRQVKLMKQLASGQ--IFNMEDIINAKNNDGRTALH  349 (677)
Q Consensus       312 ~~~L~~~~eiv~~Ll~~~--~~~~~~~in~~d~~G~TpLh  349 (677)
                          .++.+++++|+.++  ..+.+++++..+..|.+|+.
T Consensus       158 ----~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~  193 (664)
T PTZ00322        158 ----NGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSL  193 (664)
T ss_pred             ----CCcHHHHHHHHhCCCcccccCCCCCccccCCCCccc
Confidence                33344444444431  12223344444455555544


No 83 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.23  E-value=4.9e-11  Score=116.44  Aligned_cols=130  Identities=21%  Similarity=0.228  Sum_probs=115.6

Q ss_pred             chHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCC-CCCCCcHHHHHHHcCC
Q 005790          196 NRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINST-DHQGNTPLHIAAYRGQ  274 (677)
Q Consensus       196 ~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~-d~~g~tpL~~A~~~g~  274 (677)
                      +.+|..++..|..+....||..-.++ +.+|..|.++|..|+..|+.++|++||+.|+|+|.. +..+.||||+|+..|+
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~vr~v-n~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLSTVRQV-NQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHHhhhh-hccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence            57999999999999999999986666 889999999999999999999999999999999965 4568999999999999


Q ss_pred             HHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHH--HHHHHHHHc
Q 005790          275 PAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQ--VKLMKQLAS  327 (677)
Q Consensus       275 ~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~--~eiv~~Ll~  327 (677)
                      .++..+|++.| +.....+.-|+|+-.+|+.-|+.+++..++++  .+.++++.+
T Consensus        92 ~dvcrllldaG-a~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~t~~~leyyt~  145 (396)
T KOG1710|consen   92 QDVCRLLLDAG-ARMYLVNSVGRTAAQMAAFVGHHECVAIINNHITIDVLEYYTR  145 (396)
T ss_pred             chHHHHHHhcc-CccccccchhhhHHHHHHHhcchHHHHHHhccccHHHHHHhcc
Confidence            99999999999 66888999999999999999999999888665  445566554


No 84 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.23  E-value=1e-11  Score=95.26  Aligned_cols=55  Identities=47%  Similarity=0.565  Sum_probs=28.7

Q ss_pred             HHhcC-CCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 005790          214 LLENC-TDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIA  269 (677)
Q Consensus       214 LL~~g-a~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A  269 (677)
                      ||++| .++ +..|..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|
T Consensus         1 LL~~~~~~~-n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADV-NAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--T-T---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCC-cCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56777 444 77888888888888888888888888888888888888888888876


No 85 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22  E-value=3.1e-11  Score=126.23  Aligned_cols=119  Identities=24%  Similarity=0.208  Sum_probs=99.8

Q ss_pred             HHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCcccc
Q 005790          145 DIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTY  224 (677)
Q Consensus       145 pL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~  224 (677)
                      +|+.-|+..|.+|+|+-.+..--||...+..                   |.|+||-|+..||.+||++||+.|+++ |.
T Consensus       552 aLLLDaaLeGEldlVq~~i~ev~DpSqpNdE-------------------GITaLHNAiCaghyeIVkFLi~~ganV-Na  611 (752)
T KOG0515|consen  552 ALLLDAALEGELDLVQRIIYEVTDPSQPNDE-------------------GITALHNAICAGHYEIVKFLIEFGANV-NA  611 (752)
T ss_pred             HHHHhhhhcchHHHHHHHHHhhcCCCCCCcc-------------------chhHHhhhhhcchhHHHHHHHhcCCcc-cC
Confidence            4555567789999999998876666544433                   579999999999999999999999999 88


Q ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHH--HHcCCHHHHHHHHH
Q 005790          225 RDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTD-HQGNTPLHIA--AYRGQPAVVEALIL  283 (677)
Q Consensus       225 ~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d-~~g~tpL~~A--~~~g~~~iv~~LL~  283 (677)
                      .|.+||||||+|+..+++.+++.|+++|+-|-+.. .++.||..-+  ...|..++.+||-.
T Consensus       612 ~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  612 ADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             ccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            99999999999999999999999999999876544 5677887665  46788899999964


No 86 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.17  E-value=1.4e-10  Score=113.22  Aligned_cols=119  Identities=20%  Similarity=0.151  Sum_probs=101.9

Q ss_pred             CHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccc
Q 005790          144 TDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLT  223 (677)
Q Consensus       144 tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~  223 (677)
                      .||+-+ +-.+..+-+..||.---++|+.|                   +.|.++|..|+..|+.++|++||+.|+|++.
T Consensus        14 ~~Lle~-i~Kndt~~a~~LLs~vr~vn~~D-------------------~sGMs~LahAaykGnl~~v~lll~~gaDvN~   73 (396)
T KOG1710|consen   14 SPLLEA-IDKNDTEAALALLSTVRQVNQRD-------------------PSGMSVLAHAAYKGNLTLVELLLELGADVND   73 (396)
T ss_pred             hHHHHH-HccCcHHHHHHHHHHhhhhhccC-------------------CCcccHHHHHHhcCcHHHHHHHHHhCCCcCc
Confidence            567766 34577777777776433344444                   4458999999999999999999999999998


Q ss_pred             cCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 005790          224 YRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALI  282 (677)
Q Consensus       224 ~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL  282 (677)
                      ..+..+.||||+|+.+|+.++.++|++.|+.+...+.-|+|+-..|+.-|+-++|..+-
T Consensus        74 ~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   74 KQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             ccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999888764


No 87 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.17  E-value=5.6e-11  Score=90.55  Aligned_cols=54  Identities=44%  Similarity=0.629  Sum_probs=45.7

Q ss_pred             cchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHH
Q 005790          195 MNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLI  249 (677)
Q Consensus       195 ~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll  249 (677)
                      |.||||+|+..|+.+++++|+++|.++ +.+|.+|.||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            469999999999999999999999998 777999999999999999999999996


No 88 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.17  E-value=1.5e-11  Score=94.39  Aligned_cols=50  Identities=36%  Similarity=0.507  Sum_probs=23.8

Q ss_pred             hhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHH
Q 005790          335 DIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLL  386 (677)
Q Consensus       335 ~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A  386 (677)
                      .++|.+|..|.||||+||..| +.++|++||+ .|+|++.+|..|+||||+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g-~~~~v~~Ll~-~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYG-HSEVVRLLLQ-NGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT--HHHHHHHHH-CT--TT---TTS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcC-cHHHHHHHHH-CcCCCCCCcCCCCCHHHhC
Confidence            456666777777777777766 7777777775 6777777777777777665


No 89 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.64  E-value=3e-08  Score=65.17  Aligned_cols=29  Identities=28%  Similarity=0.385  Sum_probs=27.0

Q ss_pred             ccCcHHHHHHHcCCHHHHHHHHHhcCCch
Q 005790           25 WYASPIDWAAANGHYDLVRELLRIDGNHL   53 (677)
Q Consensus        25 ~g~TpL~~Aa~~G~~diV~~LL~~ga~~n   53 (677)
                      +|+||||+||+.|+.|+|++||++|+++|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            36799999999999999999999999986


No 90 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.58  E-value=2.7e-08  Score=109.51  Aligned_cols=84  Identities=24%  Similarity=0.292  Sum_probs=48.1

Q ss_pred             hhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 005790          188 SVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLH  267 (677)
Q Consensus       188 ~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~  267 (677)
                      .+.++..|+++||+|+..+..+++++||++|.+++-...+.|+||||.|+..|+++++-.||.+|+.+...|.+|..||.
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq  124 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ  124 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence            34455555666666666666666666666666553333345566666666666666666666666555555666666655


Q ss_pred             HHHH
Q 005790          268 IAAY  271 (677)
Q Consensus       268 ~A~~  271 (677)
                      .-++
T Consensus       125 ~~~r  128 (1267)
T KOG0783|consen  125 FLSR  128 (1267)
T ss_pred             HHhh
Confidence            5443


No 91 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.54  E-value=2.7e-07  Score=96.53  Aligned_cols=88  Identities=27%  Similarity=0.332  Sum_probs=82.3

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 005790          197 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPA  276 (677)
Q Consensus       197 t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~  276 (677)
                      .-||..++.|++++.-.||..|++++......|.||||.|++.|+.--+++|+-+|||++..|..|+||+.+|-..||-+
T Consensus       135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~  214 (669)
T KOG0818|consen  135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE  214 (669)
T ss_pred             HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence            46999999999999999999999997777789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHh
Q 005790          277 VVEALILA  284 (677)
Q Consensus       277 iv~~LL~~  284 (677)
                      +.+.|++.
T Consensus       215 laeRl~e~  222 (669)
T KOG0818|consen  215 LAERLVEI  222 (669)
T ss_pred             HHHHHHHH
Confidence            98888764


No 92 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.49  E-value=1.6e-07  Score=61.66  Aligned_cols=29  Identities=41%  Similarity=0.547  Sum_probs=22.0

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHhcCCCCC
Q 005790          228 QGSTILHAAAGRGQVEVVKDLIASFDIIN  256 (677)
Q Consensus       228 ~g~TpL~~A~~~g~~eivk~Ll~~ga~in  256 (677)
                      +|+||||+||..|+.++|++||++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            46777777777777777777777777776


No 93 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.41  E-value=8.5e-07  Score=94.01  Aligned_cols=88  Identities=31%  Similarity=0.401  Sum_probs=63.4

Q ss_pred             chHHHHHHhcCCHHHHHHHHhcCC-CccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 005790          196 NRAVHAAARGGNLKILKELLENCT-DVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQ  274 (677)
Q Consensus       196 ~t~Lh~A~~~g~~eivk~LL~~ga-~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~  274 (677)
                      .+.||+|+..|+-|||+++|++|+ ++.+..|..|.|+||.|+..++..+.++|++.|+.+...|..|.||-.-|-+.|+
T Consensus       900 ~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d  979 (1004)
T KOG0782|consen  900 CSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGD  979 (1004)
T ss_pred             hhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCC
Confidence            567777777777777777777776 3445566777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHHHH
Q 005790          275 PAVVEALIL  283 (677)
Q Consensus       275 ~~iv~~LL~  283 (677)
                      .++..+|-.
T Consensus       980 ~dlaayle~  988 (1004)
T KOG0782|consen  980 PDLAAYLES  988 (1004)
T ss_pred             chHHHHHhh
Confidence            777777654


No 94 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.39  E-value=2.2e-07  Score=102.55  Aligned_cols=95  Identities=21%  Similarity=0.273  Sum_probs=85.6

Q ss_pred             HHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHHhCCCC
Q 005790          210 ILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQ-GNTPLHIAAYRGQPAVVEALILASPSM  288 (677)
Q Consensus       210 ivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~-g~tpL~~A~~~g~~~iv~~LL~~g~~~  288 (677)
                      +--++-+.+.+..+..|..|+|+||+|+..+..+++++||++|++++..|.+ |+||||-|++.|+++++-+||.+| ..
T Consensus        33 lk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g-~S  111 (1267)
T KOG0783|consen   33 LKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG-RS  111 (1267)
T ss_pred             HHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcC-Cc
Confidence            3344555666666889999999999999999999999999999999999965 999999999999999999999999 67


Q ss_pred             ccccCCCCCchhhhhhh
Q 005790          289 ISVKNTSGETFLHSAVS  305 (677)
Q Consensus       289 ~~~~~~~g~tpLh~A~~  305 (677)
                      ..+.|.+|..||.+.++
T Consensus       112 L~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  112 LRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             eEEecccCCCHHHHHhh
Confidence            89999999999999887


No 95 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.37  E-value=1.3e-06  Score=92.71  Aligned_cols=118  Identities=20%  Similarity=0.242  Sum_probs=91.6

Q ss_pred             HHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhcCchHHH
Q 005790          233 LHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSGFQTYAF  312 (677)
Q Consensus       233 L~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~  312 (677)
                      |..|+..+++--++.+-.+|.++-..+.+..+.||+|+..|+-++|+++|++++.                         
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~-------------------------  924 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS-------------------------  924 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH-------------------------
Confidence            4455556655555555566777777777777788888888888888888877753                         


Q ss_pred             HHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCC
Q 005790          313 RRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQS  392 (677)
Q Consensus       313 ~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~  392 (677)
                                            ..++..|..|.|+||.|+..+ +-.+.++|++ .|+.+-..|..|.||-..|-+.++.
T Consensus       925 ----------------------elld~~de~get~lhkaa~~~-~r~vc~~lvd-agasl~ktd~kg~tp~eraqqa~d~  980 (1004)
T KOG0782|consen  925 ----------------------ELLDMADETGETALHKAACQR-NRAVCQLLVD-AGASLRKTDSKGKTPQERAQQAGDP  980 (1004)
T ss_pred             ----------------------HHHHHHhhhhhHHHHHHHHhc-chHHHHHHHh-cchhheecccCCCChHHHHHhcCCc
Confidence                                  114455788999999999888 8999999999 9999999999999999999999998


Q ss_pred             chHHHHHHHHH
Q 005790          393 ASSDILIRHLI  403 (677)
Q Consensus       393 ~~~~~lv~~Ll  403 (677)
                      +    |..+|-
T Consensus       981 d----laayle  987 (1004)
T KOG0782|consen  981 D----LAAYLE  987 (1004)
T ss_pred             h----HHHHHh
Confidence            8    455543


No 96 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.37  E-value=4e-07  Score=94.99  Aligned_cols=87  Identities=34%  Similarity=0.344  Sum_probs=56.3

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHcCCH
Q 005790          197 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIA-SFDIINSTDHQGNTPLHIAAYRGQP  275 (677)
Q Consensus       197 t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~-~ga~in~~d~~g~tpL~~A~~~g~~  275 (677)
                      ..+++|+..|++..++.+.-.|.|+ ...|.+.+|+||.|+..|+++++++|++ .+.+++.+|.+|+|||.-|...+|.
T Consensus       508 i~~~~aa~~GD~~alrRf~l~g~D~-~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~  586 (622)
T KOG0506|consen  508 INVMYAAKNGDLSALRRFALQGMDL-ETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHK  586 (622)
T ss_pred             hhhhhhhhcCCHHHHHHHHHhcccc-cccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcH
Confidence            4566666666666666666666666 5566666666666666666666666665 4556666666666666666666666


Q ss_pred             HHHHHHHHh
Q 005790          276 AVVEALILA  284 (677)
Q Consensus       276 ~iv~~LL~~  284 (677)
                      +++++|-+.
T Consensus       587 ~v~k~L~~~  595 (622)
T KOG0506|consen  587 EVVKLLEEA  595 (622)
T ss_pred             HHHHHHHHH
Confidence            666666543


No 97 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.36  E-value=5.5e-07  Score=60.76  Aligned_cols=32  Identities=44%  Similarity=0.514  Sum_probs=25.2

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCC
Q 005790          228 QGSTILHAAAGRGQVEVVKDLIASFDIINSTD  259 (677)
Q Consensus       228 ~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d  259 (677)
                      +|.||||+|+..|+.+++++|+++|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            47788888888888888888888888877765


No 98 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.34  E-value=6.1e-07  Score=60.54  Aligned_cols=32  Identities=41%  Similarity=0.701  Sum_probs=24.7

Q ss_pred             CCchHHHHHHhCCCcHHHHHHHhhCCCCCccccC
Q 005790          343 DGRTALHMAITGNVHLELVQLLMSAPSINVNVRD  376 (677)
Q Consensus       343 ~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d  376 (677)
                      +|.||||+|+..+ +.+++++||+ .|++++.+|
T Consensus         1 dG~TpLh~A~~~~-~~~~v~~Ll~-~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRG-HPDIVKLLLK-HGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTT-CHHHHHHHHH-TTSCTTCBC
T ss_pred             CcccHHHHHHHHH-HHHHHHHHHH-CcCCCCCCC
Confidence            4778888888777 7888888888 788877765


No 99 
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.31  E-value=1.5e-06  Score=92.86  Aligned_cols=89  Identities=25%  Similarity=0.238  Sum_probs=79.9

Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCCc---cccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 005790          198 AVHAAARGGNLKILKELLENCTDV---LTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQ  274 (677)
Q Consensus       198 ~Lh~A~~~g~~eivk~LL~~ga~~---~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~  274 (677)
                      -|..|+...++..+-+||.+|...   ....+.+|+|+||+||..|++.+.++|+-+|+|+..+|..|+|+|.||-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            466788888899999999999743   23456788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC
Q 005790          275 PAVVEALILASP  286 (677)
Q Consensus       275 ~~iv~~LL~~g~  286 (677)
                      -+++..|+++|-
T Consensus       707 qec~d~llq~gc  718 (749)
T KOG0705|consen  707 QECIDVLLQYGC  718 (749)
T ss_pred             HHHHHHHHHcCC
Confidence            999999999983


No 100
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.30  E-value=2.2e-06  Score=89.88  Aligned_cols=95  Identities=20%  Similarity=0.260  Sum_probs=83.1

Q ss_pred             CCCCCCCH-----HHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHH
Q 005790          138 EGEYGVTD-----IFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILK  212 (677)
Q Consensus       138 ~~~~g~tp-----L~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk  212 (677)
                      +|.+|.+.     -++++++.|+.++.--||..||++|+.....                  |.||||.|++.|+.--++
T Consensus       123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpek------------------g~TpLHvAAk~Gq~~Q~E  184 (669)
T KOG0818|consen  123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEK------------------GNTPLHVAAKAGQILQAE  184 (669)
T ss_pred             CCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCccc------------------CCchhHHHHhccchhhhh
Confidence            45555543     3556789999999999999999999887654                  469999999999999999


Q ss_pred             HHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhc
Q 005790          213 ELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIAS  251 (677)
Q Consensus       213 ~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~  251 (677)
                      +|+-+|+|+ ...|.+|+||+.+|-..||-++.+.|++.
T Consensus       185 lL~vYGAD~-~a~d~~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  185 LLAVYGADP-GAQDSSGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             HHhhccCCC-CCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence            999999999 88999999999999999999999998874


No 101
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.25  E-value=1.2e-06  Score=91.63  Aligned_cols=90  Identities=22%  Similarity=0.182  Sum_probs=80.5

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhh
Q 005790          226 DKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS  305 (677)
Q Consensus       226 d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~  305 (677)
                      +..+..++++|+..|++..++.+.-.|.|++..|.+.+|+||+|+..|+.+++++||+....+++.+|.+|+|||.-|..
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            34566789999999999999999999999999999999999999999999999999998889999999999999999999


Q ss_pred             cCchHHHHHh
Q 005790          306 GFQTYAFRRL  315 (677)
Q Consensus       306 ~~~~~~~~~L  315 (677)
                      .++.++++.|
T Consensus       583 F~h~~v~k~L  592 (622)
T KOG0506|consen  583 FKHKEVVKLL  592 (622)
T ss_pred             cCcHHHHHHH
Confidence            5554444444


No 102
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.20  E-value=3.4e-06  Score=89.83  Aligned_cols=89  Identities=25%  Similarity=0.343  Sum_probs=75.8

Q ss_pred             hHHHHHHhcCCHHHHHHHH-hcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCH
Q 005790          197 RAVHAAARGGNLKILKELL-ENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQP  275 (677)
Q Consensus       197 t~Lh~A~~~g~~eivk~LL-~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~  275 (677)
                      .|+|+++.....+-+..++ ..-+.+.+..|..|.||||+|+.-|+.+.++.|+.+|+++..++..|++|||.|+..|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            3699999888766555533 333334488999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhC
Q 005790          276 AVVEALILAS  285 (677)
Q Consensus       276 ~iv~~LL~~g  285 (677)
                      +++..+|.+.
T Consensus       102 q~i~~vlr~~  111 (560)
T KOG0522|consen  102 QIITEVLRHL  111 (560)
T ss_pred             HHHHHHHHHh
Confidence            9998888654


No 103
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.15  E-value=4.7e-06  Score=89.05  Aligned_cols=86  Identities=28%  Similarity=0.284  Sum_probs=70.4

Q ss_pred             hHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchH
Q 005790          316 DRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASS  395 (677)
Q Consensus       316 ~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~  395 (677)
                      ...+..+-+|+.++. ....+-...+.+|+|+||+||..+ ++.+.++|+= +|+|+-.+|..|+|+|.||-+.|..+  
T Consensus       634 ~~Dl~t~~lLLAhg~-~~e~~~t~~~~~grt~LHLa~~~g-nVvl~QLLiW-yg~dv~~rda~g~t~l~yar~a~sqe--  708 (749)
T KOG0705|consen  634 AEDLQTAILLLAHGS-REEVNETCGEGDGRTALHLAARKG-NVVLAQLLIW-YGVDVMARDAHGRTALFYARQAGSQE--  708 (749)
T ss_pred             HHHHHHHHHHHhccC-chhhhccccCCCCcchhhhhhhhc-chhHHHHHHH-hCccceecccCCchhhhhHhhcccHH--
Confidence            566777778888773 222223344667899999999998 9999999997 99999999999999999999999987  


Q ss_pred             HHHHHHHHHcCCC
Q 005790          396 DILIRHLISAGGI  408 (677)
Q Consensus       396 ~~lv~~Ll~~Gad  408 (677)
                        .+..|+++|.-
T Consensus       709 --c~d~llq~gcp  719 (749)
T KOG0705|consen  709 --CIDVLLQYGCP  719 (749)
T ss_pred             --HHHHHHHcCCC
Confidence              57888888864


No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.13  E-value=4.4e-06  Score=88.99  Aligned_cols=66  Identities=27%  Similarity=0.499  Sum_probs=59.7

Q ss_pred             hhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHH
Q 005790          335 DIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHL  402 (677)
Q Consensus       335 ~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~L  402 (677)
                      ..++.+|..|+||||+|+..| +.+.+++||. .|||+..+|+.|++|||.|+..|+..++..+++.+
T Consensus        46 ~~id~~D~~g~TpLhlAV~Lg-~~~~a~~Ll~-a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~  111 (560)
T KOG0522|consen   46 LVIDRRDPPGRTPLHLAVRLG-HVEAARILLS-AGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHL  111 (560)
T ss_pred             ceeccccCCCCccHHHHHHhc-CHHHHHHHHh-cCCCccccccccccHHHHHHHcCCHHHHHHHHHHh
Confidence            347888999999999999999 9999999999 99999999999999999999999998776665553


No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.09  E-value=1.2e-05  Score=90.39  Aligned_cols=133  Identities=19%  Similarity=0.108  Sum_probs=92.2

Q ss_pred             ccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHH
Q 005790           71 DEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAA  150 (677)
Q Consensus        71 ~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA  150 (677)
                      ++..+..|+..|+...++-.++.......++|..|.-|.++|+.|+.+.+.|++++|+++.-..        ..+|++| 
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~a-   95 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLA-   95 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHH-
Confidence            4556777888887777766666444466788889999999999999999999999999875311        2456766 


Q ss_pred             HhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCc
Q 005790          151 ARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDV  221 (677)
Q Consensus       151 ~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~  221 (677)
                      +..|..++|++++.+-........         ...........+.|||.+||..++.||++.||++|+.+
T Consensus        96 I~~~~v~~VE~ll~~~~~~~~~~~---------~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i  157 (822)
T KOG3609|consen   96 IAVGSVPLVELLLVHFVDAPYLER---------SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI  157 (822)
T ss_pred             HHHHHHHHHHHHHhcccccchhcc---------ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence            566899999999886443221111         11111122334468888888888888888888888887


No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.91  E-value=2e-05  Score=88.70  Aligned_cols=132  Identities=17%  Similarity=0.093  Sum_probs=86.3

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhh
Q 005790          108 GGWLLYTAASAGDLGFVKQLLDKNPL---LVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIE  184 (677)
Q Consensus       108 G~t~L~~Aa~~g~~eivk~LL~~g~~---~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~  184 (677)
                      +.--...|+..|+.-.|+..++....   .++..|.-|.++|+.| +.+.+.|++++|+++....      |.-+..-+.
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~ia-i~nenle~~eLLl~~~~~~------gdALL~aI~   97 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIA-IDNENLELQELLLDTSSEE------GDALLLAIA   97 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecc-cccccHHHHHHHhcCcccc------chHHHHHHH
Confidence            44457889999999999999988654   4677889999999998 6999999999999987543      111111111


Q ss_pred             cchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCC
Q 005790          185 EIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINS  257 (677)
Q Consensus       185 ~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~  257 (677)
                      ..         .-.+-.+... +.+....+-..+ +.+...-..+.|||++||..+++||++.||.+|+.+-.
T Consensus        98 ~~---------~v~~VE~ll~-~~~~~~~~~~~~-d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen   98 VG---------SVPLVELLLV-HFVDAPYLERSG-DANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             HH---------HHHHHHHHHh-cccccchhcccc-ccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            10         0111111111 001111111122 22234456778999999999999999999999997543


No 107
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.91  E-value=0.0001  Score=75.35  Aligned_cols=67  Identities=25%  Similarity=0.296  Sum_probs=48.8

Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcH
Q 005790          198 AVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTP  265 (677)
Q Consensus       198 ~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tp  265 (677)
                      -|..||+.|+++.|+.|++.|.++ |..|.....||.+|+..||.++|++|+++||-...-..+|.-.
T Consensus        39 elceacR~GD~d~v~~LVetgvnV-N~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC  105 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVETGVNV-NAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC  105 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHhCCCc-chhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh
Confidence            477777777777777777777777 6677777777777777777777777777777665544555444


No 108
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.84  E-value=4.5e-05  Score=71.09  Aligned_cols=66  Identities=27%  Similarity=0.287  Sum_probs=61.6

Q ss_pred             CCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 005790          219 TDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASF-DIINSTDHQGNTPLHIAAYRGQPAVVEALILAS  285 (677)
Q Consensus       219 a~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~g-a~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g  285 (677)
                      .++ +.+|..|||+|+.|+..|+.+.+.+|+.+| +.+...|..+.+++.+|-+.|..+++..|.+..
T Consensus         3 ~~i-n~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~   69 (223)
T KOG2384|consen    3 GNI-NARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND   69 (223)
T ss_pred             CCc-cchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence            355 889999999999999999999999999999 899999999999999999999999999998864


No 109
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.78  E-value=4.7e-05  Score=77.83  Aligned_cols=70  Identities=24%  Similarity=0.302  Sum_probs=60.5

Q ss_pred             CcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchh
Q 005790          230 STILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFL  300 (677)
Q Consensus       230 ~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpL  300 (677)
                      .--|..||+.|+.+.|++|++.|.++|.+|....+||.+|+..||.++|++||++| +....-.-+|.-.+
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenG-AiC~rdtf~G~RC~  106 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENG-AICSRDTFDGDRCH  106 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcC-CcccccccCcchhh
Confidence            44689999999999999999999999999999999999999999999999999999 44544444555443


No 110
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.67  E-value=4e-05  Score=88.79  Aligned_cols=78  Identities=27%  Similarity=0.383  Sum_probs=40.1

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCchhhhhhhc
Q 005790          228 QGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSG  306 (677)
Q Consensus       228 ~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~tpLh~A~~~  306 (677)
                      .|.|+||.|+..+..-++++|+++|+++|..|..|++|||.+...|+...+..|++++ ++.+..+.+|.+||++|...
T Consensus       655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~-a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRG-ADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccc-ccccccCccCcchhhHHhhh
Confidence            3445555555555555555555555555555555555555555555555555555544 34445555555555555443


No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.59  E-value=0.00022  Score=66.63  Aligned_cols=64  Identities=27%  Similarity=0.255  Sum_probs=57.4

Q ss_pred             hhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCC-CCccccCCCCCcHHHHHhhCCCCchHHHHHHH
Q 005790          336 IINAKNNDGRTALHMAITGNVHLELVQLLMSAPS-INVNVRDNDGMTTLDLLKQRPQSASSDILIRH  401 (677)
Q Consensus       336 ~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~G-adin~~d~~G~TpL~~A~~~~~~~~~~~lv~~  401 (677)
                      +||.+|..|+|||++|+..| ..+.|.+|+. .| ++|.+.|..|.+++.+|-+.|..+.+..|.+.
T Consensus         4 ~in~rD~fgWTalmcaa~eg-~~eavsyllg-rg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEG-SNEAVSYLLG-RGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CccchhhhcchHHHHHhhhc-chhHHHHHhc-cCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            48999999999999999988 9999999999 89 99999999999999999999998854444444


No 112
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.58  E-value=7.2e-05  Score=86.74  Aligned_cols=79  Identities=20%  Similarity=0.246  Sum_probs=74.1

Q ss_pred             CCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCCCcccCCchHH
Q 005790          342 NDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGCQDYSARRAIA  421 (677)
Q Consensus       342 ~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~~d~~G~T~L~  421 (677)
                      ..|.|+||.|+..+ ..-++++||+ .|+++|..|..|+||||.+...|+..    ...+|++.||+.+..+..|+++|.
T Consensus       654 ~~~~s~lh~a~~~~-~~~~~e~ll~-~ga~vn~~d~~g~~plh~~~~~g~~~----~~~~ll~~~a~~~a~~~~~~~~l~  727 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTG-DSGAVELLLQ-NGADVNALDSKGRTPLHHATASGHTS----IACLLLKRGADPNAFDPDGKLPLD  727 (785)
T ss_pred             hcccchhhhhhccc-hHHHHHHHHh-cCCcchhhhccCCCcchhhhhhcccc----hhhhhccccccccccCccCcchhh
Confidence            46899999999988 9999999999 99999999999999999999999988    577788899999999999999999


Q ss_pred             HHHHH
Q 005790          422 SHIKM  426 (677)
Q Consensus       422 ~al~~  426 (677)
                      .+...
T Consensus       728 ~a~~~  732 (785)
T KOG0521|consen  728 IAMEA  732 (785)
T ss_pred             HHhhh
Confidence            99886


No 113
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.22  E-value=0.00034  Score=80.77  Aligned_cols=91  Identities=25%  Similarity=0.220  Sum_probs=72.2

Q ss_pred             cchHHHHHHhcCCHHHHHHHHhc-CCCccccCCCCCCcHHHHHHHhCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHHc
Q 005790          195 MNRAVHAAARGGNLKILKELLEN-CTDVLTYRDKQGSTILHAAAGRGQVEVVKDLI-ASFDIINSTDHQGNTPLHIAAYR  272 (677)
Q Consensus       195 ~~t~Lh~A~~~g~~eivk~LL~~-ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll-~~ga~in~~d~~g~tpL~~A~~~  272 (677)
                      +++.+|+++..+..-+++.+++. |... ...|..|.-.+|+ |..++++.+-+|+ -.|..++.+|..|+||||+|+.+
T Consensus       574 ~~lllhL~a~~lyawLie~~~e~~~~~~-~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~  651 (975)
T KOG0520|consen  574 DMLLLHLLAELLYAWLIEKVIEWAGSGD-LELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFR  651 (975)
T ss_pred             chHHHHHHHHHhHHHHHHHHhcccccCc-hhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhc
Confidence            57899999999999999999986 5444 5567777778888 4455566555554 47888999999999999999999


Q ss_pred             CCHHHHHHHHHhCCC
Q 005790          273 GQPAVVEALILASPS  287 (677)
Q Consensus       273 g~~~iv~~LL~~g~~  287 (677)
                      |+..++..|++.|+.
T Consensus       652 G~e~l~a~l~~lga~  666 (975)
T KOG0520|consen  652 GREKLVASLIELGAD  666 (975)
T ss_pred             CHHHHHHHHHHhccc
Confidence            999999999987743


No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.10  E-value=0.00049  Score=79.54  Aligned_cols=124  Identities=17%  Similarity=-0.033  Sum_probs=100.1

Q ss_pred             ccCcHHHHHHHcCCHHHHHHHHHh-cCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchh
Q 005790           25 WYASPIDWAAANGHYDLVRELLRI-DGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLI  103 (677)
Q Consensus        25 ~g~TpL~~Aa~~G~~diV~~LL~~-ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~  103 (677)
                      -|.|-||+|+..|..-+++.+++- |-..            .+...++...+|.++..+...++.++.-    .|..+++
T Consensus       573 r~~lllhL~a~~lyawLie~~~e~~~~~~------------~eld~d~qgV~hfca~lg~ewA~ll~~~----~~~ai~i  636 (975)
T KOG0520|consen  573 RDMLLLHLLAELLYAWLIEKVIEWAGSGD------------LELDRDGQGVIHFCAALGYEWAFLPISA----DGVAIDI  636 (975)
T ss_pred             cchHHHHHHHHHhHHHHHHHHhcccccCc------------hhhcccCCChhhHhhhcCCceeEEEEee----ccccccc
Confidence            355999999999999999999985 3322            2455667778888888888888877776    8999999


Q ss_pred             hcCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc-----CCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 005790          104 RAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFG-----EGEYGVTDIFYAAARSKNCDVFRLIYDF  165 (677)
Q Consensus       104 ~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~-----~~~~g~tpL~~AA~~~g~~evv~lLl~~  165 (677)
                      +|..|+||||||+..|+..++..|++.|+.....     ....|.|+...|. .+|+..+.-+|-+.
T Consensus       637 ~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~-s~g~~gia~~lse~  702 (975)
T KOG0520|consen  637 RDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLAR-ANGHKGIAGYLSEK  702 (975)
T ss_pred             ccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhh-cccccchHHHHhhh
Confidence            9999999999999999999999999887644332     3345888887774 66888888888775


No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.51  E-value=0.0034  Score=39.29  Aligned_cols=28  Identities=29%  Similarity=0.411  Sum_probs=25.3

Q ss_pred             cCcHHHHHHHcCCHHHHHHHHHhcCCch
Q 005790           26 YASPIDWAAANGHYDLVRELLRIDGNHL   53 (677)
Q Consensus        26 g~TpL~~Aa~~G~~diV~~LL~~ga~~n   53 (677)
                      |.||||+|+..|+.+++++|++.|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            5699999999999999999999988753


No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.91  E-value=0.013  Score=36.40  Aligned_cols=26  Identities=46%  Similarity=0.455  Sum_probs=13.5

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHhcCCC
Q 005790          229 GSTILHAAAGRGQVEVVKDLIASFDI  254 (677)
Q Consensus       229 g~TpL~~A~~~g~~eivk~Ll~~ga~  254 (677)
                      |.||||+|+..++.+++++|+++|.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            34555555555555555555555443


No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.13  E-value=0.036  Score=59.32  Aligned_cols=73  Identities=27%  Similarity=0.255  Sum_probs=57.6

Q ss_pred             CHHHHHHHHhcCCCcc-----ccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 005790          207 NLKILKELLENCTDVL-----TYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEAL  281 (677)
Q Consensus       207 ~~eivk~LL~~ga~~~-----~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~iv~~L  281 (677)
                      -...|++|.+++.+.+     ...+..-.|+||+|+..|..++|.+||+.|+|+...|..|.||..++.   +.++-..+
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F  479 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIF  479 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHH
Confidence            3678888888887662     122344569999999999999999999999999999999999999876   44554444


Q ss_pred             H
Q 005790          282 I  282 (677)
Q Consensus       282 L  282 (677)
                      +
T Consensus       480 ~  480 (591)
T KOG2505|consen  480 I  480 (591)
T ss_pred             H
Confidence            4


No 118
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.91  E-value=0.27  Score=46.44  Aligned_cols=144  Identities=17%  Similarity=0.151  Sum_probs=92.0

Q ss_pred             ccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHH
Q 005790           69 WDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFY  148 (677)
Q Consensus        69 ~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~  148 (677)
                      .+-.-.+..|++.+-..+.+.+-+.....       -....+.+-.||+..+.|+|+|+-+.-.       .+..+.++-
T Consensus        44 c~~~CLl~HAVk~nmL~ILqkyke~L~~~-------~~~~q~LFElAC~~qkydiV~WI~qnL~-------i~~~~~iFd  109 (192)
T PF03158_consen   44 CDMWCLLYHAVKYNMLSILQKYKEDLENE-------RYLNQELFELACEEQKYDIVKWIGQNLH-------IYNPEDIFD  109 (192)
T ss_pred             CCHHHHHHHHHHcCcHHHHHHHHHHhhcc-------hhHHHHHHHHHHHHccccHHHHHhhccC-------CCCchhhhh
Confidence            34455678888888888887776633321       1234577889999999999999954322       222344555


Q ss_pred             HHHhcCCHHHH----HHHHhcCCCcccccccCCcchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCcccc
Q 005790          149 AAARSKNCDVF----RLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTY  224 (677)
Q Consensus       149 AA~~~g~~evv----~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~  224 (677)
                      .|...++.++.    .+++++...-     ...+            ....-..-|..|+..|-+..+...+++|.++.  
T Consensus       110 IA~~~kDlsLyslGY~l~~~~~~~~-----~~~d------------~~~ll~~hl~~a~~kgll~F~letlkygg~~~--  170 (192)
T PF03158_consen  110 IAFAKKDLSLYSLGYKLLFNRMMSE-----HNED------------PTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD--  170 (192)
T ss_pred             hhhhccchhHHHHHHHHHHhhcccc-----cccC------------HHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc--
Confidence            55666666652    2233332111     0000            01111245788999999999988999988872  


Q ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHh
Q 005790          225 RDKQGSTILHAAAGRGQVEVVKDLIA  250 (677)
Q Consensus       225 ~d~~g~TpL~~A~~~g~~eivk~Ll~  250 (677)
                           .++|..|+..++..++.+++.
T Consensus       171 -----~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  171 -----IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             -----HHHHHHHHHhhHHHHHHHhhc
Confidence                 278899999999988888764


No 119
>PLN03218 maturation of RBCL 1; Provisional
Probab=93.79  E-value=1.4  Score=54.18  Aligned_cols=189  Identities=11%  Similarity=0.057  Sum_probs=88.6

Q ss_pred             hHHHHHHhcCCHHHHHH----HHhcCCCccccCCCCC-CcHHHHHHHhCCHHHH----HHHHhcCCCCCCCCCCCCcHHH
Q 005790          197 RAVHAAARGGNLKILKE----LLENCTDVLTYRDKQG-STILHAAAGRGQVEVV----KDLIASFDIINSTDHQGNTPLH  267 (677)
Q Consensus       197 t~Lh~A~~~g~~eivk~----LL~~ga~~~~~~d~~g-~TpL~~A~~~g~~eiv----k~Ll~~ga~in~~d~~g~tpL~  267 (677)
                      +.+...++.|.++-+..    +.+.|...    +..- .+.+...++.|+.+-+    +.+.+.|..++...  -.+.+.
T Consensus       584 aLI~ay~k~G~ldeA~elf~~M~e~gi~p----~~~tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~T--ynsLI~  657 (1060)
T PLN03218        584 ALMKACANAGQVDRAKEVYQMIHEYNIKG----TPEVYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVF--FSALVD  657 (1060)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHcCCCC----ChHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHH
Confidence            45666667777554443    34444322    1112 2344555667775443    34445666555321  124455


Q ss_pred             HHHHcCCHHHHHHHHH----hCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCC
Q 005790          268 IAAYRGQPAVVEALIL----ASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNND  343 (677)
Q Consensus       268 ~A~~~g~~~iv~~LL~----~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~  343 (677)
                      ..+..|+.+-+..+++    .| ..++.  ....+.+...+..+..+.      -.++.+.+.+.+.        .+|..
T Consensus       658 a~~k~G~~eeA~~l~~eM~k~G-~~pd~--~tynsLI~ay~k~G~~ee------A~~lf~eM~~~g~--------~Pdvv  720 (1060)
T PLN03218        658 VAGHAGDLDKAFEILQDARKQG-IKLGT--VSYSSLMGACSNAKNWKK------ALELYEDIKSIKL--------RPTVS  720 (1060)
T ss_pred             HHHhCCCHHHHHHHHHHHHHcC-CCCCH--HHHHHHHHHHHhCCCHHH------HHHHHHHHHHcCC--------CCCHH
Confidence            5667777665444443    22 11110  011122333333333322      2223333322221        11222


Q ss_pred             CchHHHHHHhCCCcHH----HHHHHhhCCCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCC
Q 005790          344 GRTALHMAITGNVHLE----LVQLLMSAPSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGC  411 (677)
Q Consensus       344 G~TpLh~A~~~~~~~e----iv~lLL~~~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~  411 (677)
                      -++.|..+....+..+    +++.+.+ .|..+|....  .+-|...+..|..+....+++.+++.|..+|.
T Consensus       721 tyN~LI~gy~k~G~~eeAlelf~eM~~-~Gi~Pd~~Ty--~sLL~a~~k~G~le~A~~l~~~M~k~Gi~pd~  789 (1060)
T PLN03218        721 TMNALITALCEGNQLPKALEVLSEMKR-LGLCPNTITY--SILLVASERKDDADVGLDLLSQAKEDGIKPNL  789 (1060)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHH-cCCCCCHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCCH
Confidence            2444544443232543    3333334 5666664322  24455667778888788888888888887764


No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.69  E-value=0.087  Score=56.53  Aligned_cols=41  Identities=22%  Similarity=0.099  Sum_probs=29.1

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHH
Q 005790          108 GGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYA  149 (677)
Q Consensus       108 G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~A  149 (677)
                      -.|+||+|+..|.-++|.+||+.+ .+....|..|.||...+
T Consensus       430 tsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~kd~~Grtpy~ls  470 (591)
T KOG2505|consen  430 TSTFLHYAAAQGARKCVKYFLEEG-CDPSTKDGAGRTPYSLS  470 (591)
T ss_pred             cchHHHHHHhcchHHHHHHHHHhc-CCchhcccCCCCccccc
Confidence            456777777777777777777777 35566677777776665


No 121
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.66  E-value=0.61  Score=44.08  Aligned_cols=138  Identities=16%  Similarity=0.151  Sum_probs=90.2

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhh
Q 005790          110 WLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSV  189 (677)
Q Consensus       110 t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~  189 (677)
                      ..|..|+..+.+.+++.+-+.....     ..-..-|+.-|++..+.|+|+++-+.-.   ..+                
T Consensus        48 CLl~HAVk~nmL~ILqkyke~L~~~-----~~~~q~LFElAC~~qkydiV~WI~qnL~---i~~----------------  103 (192)
T PF03158_consen   48 CLLYHAVKYNMLSILQKYKEDLENE-----RYLNQELFELACEEQKYDIVKWIGQNLH---IYN----------------  103 (192)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHccccHHHHHhhccC---CCC----------------
Confidence            4688999999999999887664311     1112346666778899999999944211   110                


Q ss_pred             hhhhccchHHHHHHhcCCHHHHH----HHHhcCCCccccCCC--CCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCC
Q 005790          190 YKWEMMNRAVHAAARGGNLKILK----ELLENCTDVLTYRDK--QGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGN  263 (677)
Q Consensus       190 ~~~~~~~t~Lh~A~~~g~~eivk----~LL~~ga~~~~~~d~--~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~  263 (677)
                           -.+.+-.|....++++..    +++++...- ...|.  --..-|..|+..|-+..+...+++|.+++.      
T Consensus       104 -----~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~-~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------  171 (192)
T PF03158_consen  104 -----PEDIFDIAFAKKDLSLYSLGYKLLFNRMMSE-HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------  171 (192)
T ss_pred             -----chhhhhhhhhccchhHHHHHHHHHHhhcccc-cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------
Confidence                 024667788887766522    222221111 00000  001236789999999999999999988764      


Q ss_pred             cHHHHHHHcCCHHHHHHHHH
Q 005790          264 TPLHIAAYRGQPAVVEALIL  283 (677)
Q Consensus       264 tpL~~A~~~g~~~iv~~LL~  283 (677)
                      ++|..|+..++..++.+++.
T Consensus       172 ~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  172 IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHHhhHHHHHHHhhc
Confidence            78999999999999988864


No 122
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=92.24  E-value=0.84  Score=44.45  Aligned_cols=123  Identities=17%  Similarity=0.305  Sum_probs=75.0

Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 005790          198 AVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAV  277 (677)
Q Consensus       198 ~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~g~~~i  277 (677)
                      .|--|+..-+++-+.-++....+.        .++|.+|+.++..+++-+|+..-- +...|        +|-....+.=
T Consensus       156 sledAV~AsN~~~i~~~VtdKkdA--------~~Am~~si~~~K~dva~~lls~f~-ft~~d--------v~~~~~~~yd  218 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDKKDA--------HQAMWLSIGNAKEDVALYLLSKFN-FTKQD--------VASMEKELYD  218 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcchHHH--------HHHHHHHhcccHHHHHHHHHhhcc-eecch--------hhhcCcchhh
Confidence            466677777777777766644332        367778887777788888876421 11111        2222224445


Q ss_pred             HHHHHHhCCCCccccCCCCCchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhhhhhccCCCCchHHHHHHhCCCc
Q 005790          278 VEALILASPSMISVKNTSGETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMEDIINAKNNDGRTALHMAITGNVH  357 (677)
Q Consensus       278 v~~LL~~g~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~  357 (677)
                      ++++|+...+                              ...++++.++.|.+++..-. .+-..|.|.|--|+..+ +
T Consensus       219 ieY~LS~h~a------------------------------~~kvL~~Fi~~Glv~vN~~F-~~~NSGdtMLDNA~Ky~-~  266 (284)
T PF06128_consen  219 IEYLLSEHSA------------------------------SYKVLEYFINRGLVDVNKKF-QKVNSGDTMLDNAMKYK-N  266 (284)
T ss_pred             HHHHHhhcCC------------------------------cHHHHHHHHhccccccchhh-hccCCcchHHHhHHhcC-c
Confidence            6666654422                              24566677777765532221 12356888888888887 8


Q ss_pred             HHHHHHHhhCCCC
Q 005790          358 LELVQLLMSAPSI  370 (677)
Q Consensus       358 ~eiv~lLL~~~Ga  370 (677)
                      .+++.+||+ +||
T Consensus       267 ~emi~~Llk-~GA  278 (284)
T PF06128_consen  267 SEMIAFLLK-YGA  278 (284)
T ss_pred             HHHHHHHHH-cCc
Confidence            888888888 787


No 123
>PLN03218 maturation of RBCL 1; Provisional
Probab=92.24  E-value=5.8  Score=48.80  Aligned_cols=260  Identities=12%  Similarity=0.073  Sum_probs=121.6

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHH----HHHHHHhcCCCcccccccCCcchhhhhc
Q 005790          110 WLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCD----VFRLIYDFAVSPRFLTAKGGELEEHIEE  185 (677)
Q Consensus       110 t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~e----vv~lLl~~Gad~~~~~~~~~~~~~~~~~  185 (677)
                      +.|...+..|+.+.+..+++.-...-...|..-++.|..+.++.|..+    +++.+.+.|..||...            
T Consensus       477 sLI~~y~k~G~vd~A~~vf~eM~~~Gv~PdvvTynaLI~gy~k~G~~eeAl~lf~~M~~~Gv~PD~vT------------  544 (1060)
T PLN03218        477 TLISTCAKSGKVDAMFEVFHEMVNAGVEANVHTFGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVV------------  544 (1060)
T ss_pred             HHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHHH------------
Confidence            445556666776655555543211001122333445555556666653    3344444555444221            


Q ss_pred             chhhhhhhccchHHHHHHhcCCHHHHHHHHhc----CCCccccCCC-CCCcHHHHHHHhCCHHHHHHH----HhcCCCCC
Q 005790          186 IPSVYKWEMMNRAVHAAARGGNLKILKELLEN----CTDVLTYRDK-QGSTILHAAAGRGQVEVVKDL----IASFDIIN  256 (677)
Q Consensus       186 ~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~----ga~~~~~~d~-~g~TpL~~A~~~g~~eivk~L----l~~ga~in  256 (677)
                               .++.|...++.|..+-+..+++.    +..+  ..|. .-.+.+...++.|+++-+..+    .+.|..++
T Consensus       545 ---------YnsLI~a~~k~G~~deA~~lf~eM~~~~~gi--~PD~vTynaLI~ay~k~G~ldeA~elf~~M~e~gi~p~  613 (1060)
T PLN03218        545 ---------FNALISACGQSGAVDRAFDVLAEMKAETHPI--DPDHITVGALMKACANAGQVDRAKEVYQMIHEYNIKGT  613 (1060)
T ss_pred             ---------HHHHHHHHHHCCCHHHHHHHHHHHHHhcCCC--CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCC
Confidence                     13566666777776655444432    1111  1121 122445566677876644444    44554433


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCC-CchhhhhhhcCchHHHHHhhHHHHHHHHHHcccccchhh
Q 005790          257 STDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSG-ETFLHSAVSGFQTYAFRRLDRQVKLMKQLASGQIFNMED  335 (677)
Q Consensus       257 ~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g-~tpLh~A~~~~~~~~~~~L~~~~eiv~~Ll~~~~~~~~~  335 (677)
                      ..  ...+.+...++.|+.+-+..+++.-...--..|..- .+.+...+..+..      ..-.++++.+.+.+. .   
T Consensus       614 ~~--tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~TynsLI~a~~k~G~~------eeA~~l~~eM~k~G~-~---  681 (1060)
T PLN03218        614 PE--VYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVFFSALVDVAGHAGDL------DKAFEILQDARKQGI-K---  681 (1060)
T ss_pred             hH--HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCH------HHHHHHHHHHHHcCC-C---
Confidence            21  123455566778887655555432100000011111 1223333333332      222334444444331 1   


Q ss_pred             hhhccCCCCchHHHHH-HhCCCcHHHHHHHhhC---CCCCccccCCCCCcHHHHHhhCCCCchHHHHHHHHHHcCCCCCC
Q 005790          336 IINAKNNDGRTALHMA-ITGNVHLELVQLLMSA---PSINVNVRDNDGMTTLDLLKQRPQSASSDILIRHLISAGGIFGC  411 (677)
Q Consensus       336 ~in~~d~~G~TpLh~A-~~~~~~~eiv~lLL~~---~Gadin~~d~~G~TpL~~A~~~~~~~~~~~lv~~Ll~~Gadin~  411 (677)
                          .|..-.+.|..+ +..+ ..+-+..+++.   .|..++...  -.+-+...+..|+.+-+..+++.+.+.|..+|.
T Consensus       682 ----pd~~tynsLI~ay~k~G-~~eeA~~lf~eM~~~g~~Pdvvt--yN~LI~gy~k~G~~eeAlelf~eM~~~Gi~Pd~  754 (1060)
T PLN03218        682 ----LGTVSYSSLMGACSNAK-NWKKALELYEDIKSIKLRPTVST--MNALITALCEGNQLPKALEVLSEMKRLGLCPNT  754 (1060)
T ss_pred             ----CCHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCCH
Confidence                122223444444 4444 55544333321   455555432  123445557888888888888888888988765


No 124
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.33  E-value=1.2  Score=43.53  Aligned_cols=119  Identities=15%  Similarity=0.140  Sum_probs=68.0

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhh
Q 005790          111 LLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVY  190 (677)
Q Consensus       111 ~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~  190 (677)
                      .|--|+..-+++.+.-++....        .-.+++.++ +.++..+++-+|+.+=   ++....-..+       +.  
T Consensus       156 sledAV~AsN~~~i~~~VtdKk--------dA~~Am~~s-i~~~K~dva~~lls~f---~ft~~dv~~~-------~~--  214 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDKK--------DAHQAMWLS-IGNAKEDVALYLLSKF---NFTKQDVASM-------EK--  214 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcchH--------HHHHHHHHH-hcccHHHHHHHHHhhc---ceecchhhhc-------Cc--
Confidence            4677888888888877775432        123555555 5667788888888731   1111100000       00  


Q ss_pred             hhhccchHHHHHH--hcCCHHHHHHHHhcCC-Cccc--cCCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Q 005790          191 KWEMMNRAVHAAA--RGGNLKILKELLENCT-DVLT--YRDKQGSTILHAAAGRGQVEVVKDLIASFDI  254 (677)
Q Consensus       191 ~~~~~~t~Lh~A~--~~g~~eivk~LL~~ga-~~~~--~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~  254 (677)
                          +.--+.++.  ...+..+++++|++|- +++.  .+-..|.|-|--|++.++.+++.+||++||.
T Consensus       215 ----~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  215 ----ELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             ----chhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence                000122222  2234677777777774 3321  2345677778888888888888888887774


No 125
>PLN03077 Protein ECB2; Provisional
Probab=90.27  E-value=37  Score=41.17  Aligned_cols=57  Identities=18%  Similarity=0.191  Sum_probs=30.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHH----HHHHHHhcCCCcc
Q 005790          110 WLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCD----VFRLIYDFAVSPR  170 (677)
Q Consensus       110 t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~e----vv~lLl~~Gad~~  170 (677)
                      +.+...+..|+++-+..+++.-.    ..|..-++.+..+.++.|..+    +++.+.+.|..|+
T Consensus       328 ~Li~~y~k~g~~~~A~~vf~~m~----~~d~~s~n~li~~~~~~g~~~~A~~lf~~M~~~g~~Pd  388 (857)
T PLN03077        328 SLIQMYLSLGSWGEAEKVFSRME----TKDAVSWTAMISGYEKNGLPDKALETYALMEQDNVSPD  388 (857)
T ss_pred             HHHHHHHhcCCHHHHHHHHhhCC----CCCeeeHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCC
Confidence            34555556666666666665432    133444566666666666543    3333344555554


No 126
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.96  E-value=1.1  Score=36.38  Aligned_cols=46  Identities=13%  Similarity=0.383  Sum_probs=31.6

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHh
Q 005790           28 SPIDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLE   92 (677)
Q Consensus        28 TpL~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~   92 (677)
                      .-|..|+..|+.||++.+++.+ .+                  ....+..|+..++.+++++|++
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~------------------~~~~l~~AI~~H~n~i~~~l~~   53 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KP------------------DNDCLEYAIKSHNNEIADWLIE   53 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-cc------------------HHHHHHHHHHHhhHHHHHHHHH
Confidence            4588999999999999999765 22                  1233566666666666666665


No 127
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=86.30  E-value=41  Score=39.65  Aligned_cols=90  Identities=14%  Similarity=0.082  Sum_probs=54.6

Q ss_pred             HHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcC
Q 005790           75 FDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSK  154 (677)
Q Consensus        75 l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g  154 (677)
                      +...++.+......-+.......|..++..  .....+..-+..|+++-+..+++.-+.    +|..-++.|..+.++.|
T Consensus       130 l~a~~~~~~~~~a~~l~~~m~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~----~~~~t~n~li~~~~~~g  203 (697)
T PLN03081        130 VEACIALKSIRCVKAVYWHVESSGFEPDQY--MMNRVLLMHVKCGMLIDARRLFDEMPE----RNLASWGTIIGGLVDAG  203 (697)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHhCCCcchH--HHHHHHHHHhcCCCHHHHHHHHhcCCC----CCeeeHHHHHHHHHHCc
Confidence            444445555444444444444466665432  234567777888999999998877542    45556777887777888


Q ss_pred             CHH----HHHHHHhcCCCcc
Q 005790          155 NCD----VFRLIYDFAVSPR  170 (677)
Q Consensus       155 ~~e----vv~lLl~~Gad~~  170 (677)
                      ..+    +++-+++.|..|+
T Consensus       204 ~~~~A~~lf~~M~~~g~~p~  223 (697)
T PLN03081        204 NYREAFALFREMWEDGSDAE  223 (697)
T ss_pred             CHHHHHHHHHHHHHhCCCCC
Confidence            754    4444455566554


No 128
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=84.22  E-value=1.9  Score=34.95  Aligned_cols=48  Identities=23%  Similarity=0.278  Sum_probs=37.0

Q ss_pred             chHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhc
Q 005790          196 NRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIAS  251 (677)
Q Consensus       196 ~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~  251 (677)
                      ...+..|+.+|+.||++.+++.+. + +      ...|..|+..-+.+++++|++.
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~~-~-~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKNK-P-D------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHhc-c-H------HHHHHHHHHHhhHHHHHHHHHh
Confidence            356788888999999988887652 2 1      3568888888888888888885


No 129
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=83.61  E-value=64  Score=38.04  Aligned_cols=310  Identities=12%  Similarity=0.040  Sum_probs=160.3

Q ss_pred             CcHHHHHHHcCCHHHHHHHH----HhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCch
Q 005790           27 ASPIDWAAANGHYDLVRELL----RIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSL  102 (677)
Q Consensus        27 ~TpL~~Aa~~G~~diV~~LL----~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~  102 (677)
                      .+.|...+..|..+..+.+.    +.|...+.              ......+...++.+..+-..-+++....      
T Consensus       228 ~~ll~a~~~~~~~~~~~~l~~~~~~~g~~~d~--------------~~~n~Li~~y~k~g~~~~A~~vf~~m~~------  287 (697)
T PLN03081        228 VVMLRASAGLGSARAGQQLHCCVLKTGVVGDT--------------FVSCALIDMYSKCGDIEDARCVFDGMPE------  287 (697)
T ss_pred             HHHHHHHhcCCcHHHHHHHHHHHHHhCCCccc--------------eeHHHHHHHHHHCCCHHHHHHHHHhCCC------
Confidence            35666667778877777663    44544321              2233445555666665444444432111      


Q ss_pred             hhcCCC-ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHH----HHHHHHhcCCCcccccccCC
Q 005790          103 IRAGYG-GWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCD----VFRLIYDFAVSPRFLTAKGG  177 (677)
Q Consensus       103 ~~d~~G-~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~e----vv~lLl~~Gad~~~~~~~~~  177 (677)
                       +|..- .+.+..-+..|+.+-+..+++.-...-...|..-++.+..+++..|..+    +.+.+++.|..++....   
T Consensus       288 -~~~vt~n~li~~y~~~g~~~eA~~lf~~M~~~g~~pd~~t~~~ll~a~~~~g~~~~a~~i~~~m~~~g~~~d~~~~---  363 (697)
T PLN03081        288 -KTTVAWNSMLAGYALHGYSEEALCLYYEMRDSGVSIDQFTFSIMIRIFSRLALLEHAKQAHAGLIRTGFPLDIVAN---  363 (697)
T ss_pred             -CChhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHhCCCCCeeeh---
Confidence             12222 2455566677877665555533100011134445666777777777764    55666777877664332   


Q ss_pred             cchhhhhcchhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHH-HHHhCCH----HHHHHHHhcC
Q 005790          178 ELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHA-AAGRGQV----EVVKDLIASF  252 (677)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~-A~~~g~~----eivk~Ll~~g  252 (677)
                                        ++.+..-+..|.++-...+++.-..    +|..-++.|.. .+..|+.    ++++.+.+.|
T Consensus       364 ------------------~~Li~~y~k~G~~~~A~~vf~~m~~----~d~~t~n~lI~~y~~~G~~~~A~~lf~~M~~~g  421 (697)
T PLN03081        364 ------------------TALVDLYSKWGRMEDARNVFDRMPR----KNLISWNALIAGYGNHGRGTKAVEMFERMIAEG  421 (697)
T ss_pred             ------------------HHHHHHHHHCCCHHHHHHHHHhCCC----CCeeeHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence                              3566777788998888888775432    33344555544 4566764    4455555677


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCC--chhhhhh------hcCchHHHHHhhHHHHHHHH
Q 005790          253 DIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGE--TFLHSAV------SGFQTYAFRRLDRQVKLMKQ  324 (677)
Q Consensus       253 a~in~~d~~g~tpL~~A~~~g~~~iv~~LL~~g~~~~~~~~~~g~--tpLh~A~------~~~~~~~~~~L~~~~eiv~~  324 (677)
                      ..+|...  -.+.|...+..|..+-...+++.-..      ..|.  +..|+++      +.|..         .+..++
T Consensus       422 ~~Pd~~T--~~~ll~a~~~~g~~~~a~~~f~~m~~------~~g~~p~~~~y~~li~~l~r~G~~---------~eA~~~  484 (697)
T PLN03081        422 VAPNHVT--FLAVLSACRYSGLSEQGWEIFQSMSE------NHRIKPRAMHYACMIELLGREGLL---------DEAYAM  484 (697)
T ss_pred             CCCCHHH--HHHHHHHHhcCCcHHHHHHHHHHHHH------hcCCCCCccchHhHHHHHHhcCCH---------HHHHHH
Confidence            7766543  12344445566766655544432100      0111  1123332      22221         122222


Q ss_pred             HHcccccchhhhhhccCCCCchHHHHHHhCCCcHHHHHHHhhCCCCCccccCCCCC-cHHHHHhhCCCCchHHHHHHHHH
Q 005790          325 LASGQIFNMEDIINAKNNDGRTALHMAITGNVHLELVQLLMSAPSINVNVRDNDGM-TTLDLLKQRPQSASSDILIRHLI  403 (677)
Q Consensus       325 Ll~~~~~~~~~~in~~d~~G~TpLh~A~~~~~~~eiv~lLL~~~Gadin~~d~~G~-TpL~~A~~~~~~~~~~~lv~~Ll  403 (677)
                      +-+.. .       ..+..-++.|.-|+...++.+..+...+ .-..+...+.... .-+...+..|+.+-+..+++.+.
T Consensus       485 ~~~~~-~-------~p~~~~~~~Ll~a~~~~g~~~~a~~~~~-~l~~~~p~~~~~y~~L~~~y~~~G~~~~A~~v~~~m~  555 (697)
T PLN03081        485 IRRAP-F-------KPTVNMWAALLTACRIHKNLELGRLAAE-KLYGMGPEKLNNYVVLLNLYNSSGRQAEAAKVVETLK  555 (697)
T ss_pred             HHHCC-C-------CCCHHHHHHHHHHHHHcCCcHHHHHHHH-HHhCCCCCCCcchHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            21111 1       1122224566666654448887766655 2222222122222 34445678888888888899998


Q ss_pred             HcCCC
Q 005790          404 SAGGI  408 (677)
Q Consensus       404 ~~Gad  408 (677)
                      +.|..
T Consensus       556 ~~g~~  560 (697)
T PLN03081        556 RKGLS  560 (697)
T ss_pred             HcCCc
Confidence            88874


No 130
>PLN03077 Protein ECB2; Provisional
Probab=78.09  E-value=1.7e+02  Score=35.49  Aligned_cols=60  Identities=17%  Similarity=0.179  Sum_probs=41.1

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHH----HHHHHHhcCCCccc
Q 005790          108 GGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCD----VFRLIYDFAVSPRF  171 (677)
Q Consensus       108 G~t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~e----vv~lLl~~Gad~~~  171 (677)
                      +.+.|..-+..|+.+.+..+++.-+.    .|..-++.+..+.++.|..+    +++.+...|..|+.
T Consensus       124 ~n~li~~~~~~g~~~~A~~~f~~m~~----~d~~~~n~li~~~~~~g~~~~A~~~f~~M~~~g~~Pd~  187 (857)
T PLN03077        124 GNAMLSMFVRFGELVHAWYVFGKMPE----RDLFSWNVLVGGYAKAGYFDEALCLYHRMLWAGVRPDV  187 (857)
T ss_pred             HHHHHHHHHhCCChHHHHHHHhcCCC----CCeeEHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCh
Confidence            34566666889999988888876542    45566778888877888764    34444556777763


No 131
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=63.18  E-value=1.9e+02  Score=30.16  Aligned_cols=114  Identities=11%  Similarity=0.081  Sum_probs=58.9

Q ss_pred             hhccchHHHHHHhcCCHHHHHHHHh----cCCCccccCCCCCCcHHHHHHHhCCHHH----HHHHHhcCCCCCCCCCCCC
Q 005790          192 WEMMNRAVHAAARGGNLKILKELLE----NCTDVLTYRDKQGSTILHAAAGRGQVEV----VKDLIASFDIINSTDHQGN  263 (677)
Q Consensus       192 ~~~~~t~Lh~A~~~g~~eivk~LL~----~ga~~~~~~d~~g~TpL~~A~~~g~~ei----vk~Ll~~ga~in~~d~~g~  263 (677)
                      +..|+..+..+...+..+..+.+++    +-.++  ..+..|...+.........+.    ++.|+.+-. .-..|..|+
T Consensus       126 d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l--~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~-~L~~d~~Gn  202 (322)
T cd07920         126 DQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVAL--STHPYGCRVIQRCLEHCSEEQREPLLEEILEHAL-ELVQDQFGN  202 (322)
T ss_pred             cccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHH--HcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHH-HHhcCCchh
Confidence            3445556666666555444444333    22222  245677777776666655443    333333211 123467788


Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCC--CCccccCCCCCchhhhhhhcCc
Q 005790          264 TPLHIAAYRGQPAVVEALILASP--SMISVKNTSGETFLHSAVSGFQ  308 (677)
Q Consensus       264 tpL~~A~~~g~~~iv~~LL~~g~--~~~~~~~~~g~tpLh~A~~~~~  308 (677)
                      ..+..+...+..+..+.+++.-.  ...-..+..|...+..+...+.
T Consensus       203 ~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~~~~  249 (322)
T cd07920         203 YVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLKHAS  249 (322)
T ss_pred             hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHCC
Confidence            88888888877654444443211  1112345666666666655443


No 132
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=50.79  E-value=56  Score=36.19  Aligned_cols=105  Identities=18%  Similarity=0.104  Sum_probs=53.2

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhh
Q 005790          110 WLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSV  189 (677)
Q Consensus       110 t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~  189 (677)
                      +=+..|...|+++.+..+...-.      +..-|.-|--+|...|+.++++.-+.+.-|..                   
T Consensus       323 ~rFeLAl~lg~L~~A~~~a~~~~------~~~~W~~Lg~~AL~~g~~~lAe~c~~k~~d~~-------------------  377 (443)
T PF04053_consen  323 HRFELALQLGNLDIALEIAKELD------DPEKWKQLGDEALRQGNIELAEECYQKAKDFS-------------------  377 (443)
T ss_dssp             HHHHHHHHCT-HHHHHHHCCCCS------THHHHHHHHHHHHHTTBHHHHHHHHHHCT-HH-------------------
T ss_pred             HHhHHHHhcCCHHHHHHHHHhcC------cHHHHHHHHHHHHHcCCHHHHHHHHHhhcCcc-------------------
Confidence            34677777787777776664432      12234445555666677777666666543221                   


Q ss_pred             hhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCH-HHHHHHHhc
Q 005790          190 YKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQV-EVVKDLIAS  251 (677)
Q Consensus       190 ~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~-eivk~Ll~~  251 (677)
                             ..+.+....|+.+-++.|.+...     ....-..+++.+...|+. +++++|++.
T Consensus       378 -------~L~lLy~~~g~~~~L~kl~~~a~-----~~~~~n~af~~~~~lgd~~~cv~lL~~~  428 (443)
T PF04053_consen  378 -------GLLLLYSSTGDREKLSKLAKIAE-----ERGDINIAFQAALLLGDVEECVDLLIET  428 (443)
T ss_dssp             -------HHHHHHHHCT-HHHHHHHHHHHH-----HTT-HHHHHHHHHHHT-HHHHHHHHHHT
T ss_pred             -------ccHHHHHHhCCHHHHHHHHHHHH-----HccCHHHHHHHHHHcCCHHHHHHHHHHc
Confidence                   34555556666666666654211     011112455555555553 455555554


No 133
>PF01671 ASFV_360:  African swine fever virus multigene family 360 protein;  InterPro: IPR002595 The multigene family 360 protein are found within the African swine fever virus (ASFV) genome which consist of dsDNA and has similar structural features to the poxviruses []. The biological function of this family is not known [], although Q65137 from SWISSPROT is a major structural protein [].; GO: 0042330 taxis
Probab=36.21  E-value=1.2e+02  Score=29.44  Aligned_cols=123  Identities=11%  Similarity=-0.014  Sum_probs=63.4

Q ss_pred             HHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccccCCcchhhhhcchhhhhhh
Q 005790          114 TAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWE  193 (677)
Q Consensus       114 ~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~~~~~~~~~~~~~~~~~~~~  193 (677)
                      .|+..+-.+.++++-++.+...      .| -|..|...++-.|+-+.--+..++.+.                      
T Consensus        91 ~Av~ynL~~AI~Yfyq~y~hl~------~W-RL~CaL~fNnvfdlHe~y~~eki~mdi----------------------  141 (215)
T PF01671_consen   91 IAVQYNLKEAIQYFYQKYPHLN------DW-RLICALYFNNVFDLHEIYNKEKIRMDI----------------------  141 (215)
T ss_pred             HHHHhhhHHHHHHHHHhccchh------hH-HHHHHHHhCCHHHHHHHHHHhhcCCCH----------------------
Confidence            4777777788888887765221      11 144443333333444444333222210                      


Q ss_pred             ccchHHHHHHhcC-CHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 005790          194 MMNRAVHAAARGG-NLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYR  272 (677)
Q Consensus       194 ~~~t~Lh~A~~~g-~~eivk~LL~~ga~~~~~~d~~g~TpL~~A~~~g~~eivk~Ll~~ga~in~~d~~g~tpL~~A~~~  272 (677)
                        .--+.+||... +.-.+-+..--|+|++        .++...++..+..=+=+-++-||+.-.      -....|.+.
T Consensus       142 --neMM~lAC~~d~N~ltIYYCf~LGAdIN--------~AM~~si~~~n~~N~fFCIDLGAnafe------e~~~lA~q~  205 (215)
T PF01671_consen  142 --NEMMRLACMYDNNFLTIYYCFALGADIN--------QAMLTSIQNYNIGNMFFCIDLGANAFE------EAKALAEQK  205 (215)
T ss_pred             --HHHHHHHHcCCCCchHHHHHHHhcccHH--------HHHHHHHHhcccccEEeeeccCCChHH------HHHHHHHHh
Confidence              12355555443 4555556666666662        456666666665555555666665432      235556666


Q ss_pred             CCHHHHHHH
Q 005790          273 GQPAVVEAL  281 (677)
Q Consensus       273 g~~~iv~~L  281 (677)
                      ++..++..|
T Consensus       206 ~~~~i~~iL  214 (215)
T PF01671_consen  206 NYYNISNIL  214 (215)
T ss_pred             cHHHHHHHh
Confidence            555555443


No 134
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.39  E-value=2e+02  Score=34.26  Aligned_cols=174  Identities=18%  Similarity=0.093  Sum_probs=88.2

Q ss_pred             HHHHHHcCCHHHHHHHHHhcCCchhhhhhHHhhhhccccccccccHHHHHhhchHHHHHHHHhhhhcCCCCchhhcCCCC
Q 005790           30 IDWAAANGHYDLVRELLRIDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGG  109 (677)
Q Consensus        30 L~~Aa~~G~~diV~~LL~~ga~~n~~~~~~~~~~~l~~~~~~~~~l~~A~~~~~~~v~~lLl~~~~~~g~~~~~~d~~G~  109 (677)
                      +-.|..+.++|-|--|++.+--                  -|..++.+..+.+..++..-+++              +..
T Consensus       600 FKlALi~k~ydeVl~lI~ns~L------------------vGqaiIaYLqKkgypeiAL~FVk--------------D~~  647 (1202)
T KOG0292|consen  600 FKLALLNKKYDEVLHLIKNSNL------------------VGQAIIAYLQKKGYPEIALHFVK--------------DER  647 (1202)
T ss_pred             HHHHHHhhhhHHHHHHHHhcCc------------------ccHHHHHHHHhcCCcceeeeeec--------------Ccc
Confidence            4467777777777777764321                  23444444444444443333322              234


Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCcccccc---cCCcchhhhhcc
Q 005790          110 WLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTA---KGGELEEHIEEI  186 (677)
Q Consensus       110 t~L~~Aa~~g~~eivk~LL~~g~~~~~~~~~~g~tpL~~AA~~~g~~evv~lLl~~Gad~~~~~~---~~~~~~~~~~~~  186 (677)
                      |=+-.|...|++|++-....+..      +.+-|.-|-.+|...|+..|+++..+.--+.+...-   ..++.+......
T Consensus       648 tRF~LaLe~gnle~ale~akkld------d~d~w~rLge~Al~qgn~~IaEm~yQ~~knfekLsfLYliTgn~eKL~Km~  721 (1202)
T KOG0292|consen  648 TRFELALECGNLEVALEAAKKLD------DKDVWERLGEEALRQGNHQIAEMCYQRTKNFEKLSFLYLITGNLEKLSKMM  721 (1202)
T ss_pred             hheeeehhcCCHHHHHHHHHhcC------cHHHHHHHHHHHHHhcchHHHHHHHHHhhhhhheeEEEEEeCCHHHHHHHH
Confidence            55667777888777665554432      334455566677777888888887775443331110   011111111111


Q ss_pred             hhhhhhhccchHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCCcHHHH--HHHhCCHHHHHHHHhc
Q 005790          187 PSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHA--AAGRGQVEVVKDLIAS  251 (677)
Q Consensus       187 ~~~~~~~~~~t~Lh~A~~~g~~eivk~LL~~ga~~~~~~d~~g~TpL~~--A~~~g~~eivk~Ll~~  251 (677)
                      ......+...+-++.|...|+.+--.-+++.          .|..||-|  |+.+|..+..+.|.+.
T Consensus       722 ~iae~r~D~~~~~qnalYl~dv~ervkIl~n----------~g~~~laylta~~~G~~~~ae~l~ee  778 (1202)
T KOG0292|consen  722 KIAEIRNDATGQFQNALYLGDVKERVKILEN----------GGQLPLAYLTAAAHGLEDQAEKLGEE  778 (1202)
T ss_pred             HHHHhhhhhHHHHHHHHHhccHHHHHHHHHh----------cCcccHHHHHHhhcCcHHHHHHHHHh
Confidence            1111111223345556666665433333332          34455544  5567777777777764


No 135
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=29.75  E-value=4.6e+02  Score=32.90  Aligned_cols=26  Identities=31%  Similarity=0.166  Sum_probs=23.5

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhcCCch
Q 005790           28 SPIDWAAANGHYDLVRELLRIDGNHL   53 (677)
Q Consensus        28 TpL~~Aa~~G~~diV~~LL~~ga~~n   53 (677)
                      .++.-|......|.|++||++|.+..
T Consensus       427 ~aM~dALv~DR~dFV~LLlEnGv~m~  452 (1381)
T KOG3614|consen  427 SAMDDALVLDRPDFVRLLLENGVSMQ  452 (1381)
T ss_pred             HHHHHHHHhCcHHHHHHHHHcCcchh
Confidence            67888999999999999999998864


No 136
>KOG4032 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.55  E-value=3.4e+02  Score=25.90  Aligned_cols=21  Identities=29%  Similarity=0.638  Sum_probs=15.8

Q ss_pred             HHHHHHcCCHHHHHHHHHcCC
Q 005790          112 LYTAASAGDLGFVKQLLDKNP  132 (677)
Q Consensus       112 L~~Aa~~g~~eivk~LL~~g~  132 (677)
                      ++..|.+++...++.|+.+-+
T Consensus        97 ~f~~~~~~N~~~ieells~l~  117 (184)
T KOG4032|consen   97 LFHDIQNGNYAIIEELLSKLP  117 (184)
T ss_pred             HHHHHHcccHHHHHHHHHHcc
Confidence            667777888888888887654


Done!