BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005793
(677 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 89/365 (24%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F+ LK LG G G V L + T ++AMK++ TE +LQ+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R FSE ARFY AE++ AL+
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 262
Query: 396 YLHM-LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCV 454
YLH ++YRDLK EN+++ +DGHI ++DF L C +K T
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGAT----------- 305
Query: 455 QPACIEPTCVIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSAR 514
++ C P ++ PE++ + R
Sbjct: 306 ---------------MKTFCGTPEYLA----------------------PEVLEDNDYGR 328
Query: 515 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
++ + G G+ +YE++ G+ PF + ++ +
Sbjct: 329 AVDWWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFELILMEE 365
Query: 575 LRFPESPSVSFAARDLIRGLLVKEPQHRL-AYRRGATEVKRHPFFQSVNWALI--RCASP 631
+RFP ++ A+ L+ GLL K+P+ RL A E+ +H FF + W + + SP
Sbjct: 366 IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP 423
Query: 632 PDVPK 636
P P+
Sbjct: 424 PFKPQ 428
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 159/370 (42%), Gaps = 89/370 (24%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
M + +N F+ LK LG G G V L + T ++AMK++ TE +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEV 390
LQ+ HPFL L F+T C VME+ GG+L H R+R FSE ARFY AE+
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEI 118
Query: 391 LLALEYLHM-LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKN 449
+ AL+YLH ++YRDLK EN+++ +DGHI ++DF L C +K T
Sbjct: 119 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGAT------ 166
Query: 450 LSYCVQPACIEPTCVIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAE 509
++ C P ++ PE++ +
Sbjct: 167 --------------------MKXFCGTPEYLA----------------------PEVLED 184
Query: 510 PTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFN 569
R++ + G G+ +YE++ G+ PF +
Sbjct: 185 NDYGRAVDWWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFEL 221
Query: 570 VVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRL-AYRRGATEVKRHPFFQSVNWALI-- 626
++ + +RFP ++ A+ L+ GLL K+P+ RL A E+ +H FF + W +
Sbjct: 222 ILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYE 279
Query: 627 RCASPPDVPK 636
+ SPP P+
Sbjct: 280 KKLSPPFKPQ 289
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 89/365 (24%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F+ LK LG G G V L + T ++AMK++ TE +LQ+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R FSE ARFY AE++ AL+
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 265
Query: 396 YLHM-LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCV 454
YLH ++YRDLK EN+++ +DGHI ++DF L C +K T
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGAT----------- 308
Query: 455 QPACIEPTCVIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSAR 514
++ C P ++ PE++ + R
Sbjct: 309 ---------------MKTFCGTPEYLA----------------------PEVLEDNDYGR 331
Query: 515 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
++ + G G+ +YE++ G+ PF + ++ +
Sbjct: 332 AVDWWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFELILMEE 368
Query: 575 LRFPESPSVSFAARDLIRGLLVKEPQHRL-AYRRGATEVKRHPFFQSVNWALI--RCASP 631
+RFP ++ A+ L+ GLL K+P+ RL A E+ +H FF + W + + SP
Sbjct: 369 IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP 426
Query: 632 PDVPK 636
P P+
Sbjct: 427 PFKPQ 431
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 89/365 (24%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F+ LK LG G G V L + T ++AMK++ TE +LQ+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R FSE ARFY AE++ AL+
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 122
Query: 396 YLHM-LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCV 454
YLH ++YRDLK EN+++ +DGHI ++DF L C +K T
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGAT----------- 165
Query: 455 QPACIEPTCVIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSAR 514
++ C P ++ PE++ + R
Sbjct: 166 ---------------MKXFCGTPEYLA----------------------PEVLEDNDYGR 188
Query: 515 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
++ + G G+ +YE++ G+ PF + ++ +
Sbjct: 189 AVDWWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFELILMEE 225
Query: 575 LRFPESPSVSFAARDLIRGLLVKEPQHRL-AYRRGATEVKRHPFFQSVNWALI--RCASP 631
+RFP ++ A+ L+ GLL K+P+ RL A E+ +H FF + W + + SP
Sbjct: 226 IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP 283
Query: 632 PDVPK 636
P P+
Sbjct: 284 PFKPQ 288
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 89/365 (24%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F+ LK LG G G V L + T ++AMK++ TE +LQ+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R FSE ARFY AE++ AL+
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 124
Query: 396 YLHM-LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCV 454
YLH ++YRDLK EN+++ +DGHI ++DF L C +K T
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGAT----------- 167
Query: 455 QPACIEPTCVIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSAR 514
++ C P ++ PE++ + R
Sbjct: 168 ---------------MKXFCGTPEYLA----------------------PEVLEDNDYGR 190
Query: 515 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
++ + G G+ +YE++ G+ PF + ++ +
Sbjct: 191 AVDWWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFELILMEE 227
Query: 575 LRFPESPSVSFAARDLIRGLLVKEPQHRL-AYRRGATEVKRHPFFQSVNWALI--RCASP 631
+RFP ++ A+ L+ GLL K+P+ RL A E+ +H FF + W + + SP
Sbjct: 228 IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP 285
Query: 632 PDVPK 636
P P+
Sbjct: 286 PFKPQ 290
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
+A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 16/188 (8%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPA 457
H L +IYRDLKPEN+L+ + G+I ++DF + R ++ + + C P
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--------------VKGRTWTLCGTPE 204
Query: 458 CIEPTCVI 465
+ P ++
Sbjct: 205 YLAPEIIL 212
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K +G G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGGD+ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K +G G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGGD+ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
+A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 16/188 (8%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 143
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPA 457
H L +IYRDLKPEN+L+ + G+I ++DF + R ++ + + C P
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--------------VKGRTWTLCGTPE 189
Query: 458 CIEPTCVI 465
+ P ++
Sbjct: 190 YLAPEIIL 197
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 173 FAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 232
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 233 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 290
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 291 IYQRKVEAPFIPKFK 305
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + T HFAMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + T HFAMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K +G G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + T HFAMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 158
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+WE+ +H L+ F+ +K LG G G V L + T H+AMK++D
Sbjct: 30 KWESPAQNTAH-----LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E+ ILQ+++ PFL L F+ + +VME+ PGG++ + R+ G+ FSE
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEP 142
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
ARFY A+++L EYLH L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+WE+ +H L+ F+ +K LG G G V L + T H+AMK++D
Sbjct: 30 KWESPAQNTAH-----LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E+ ILQ+++ PFL L F+ + +VME+ PGG++ + R+ G+ FSE
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEP 142
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
ARFY A+++L EYLH L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++ H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 158
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+WE+ +H L+ F+ +K LG G G V L + T H+AMK++D
Sbjct: 30 KWESPAQNTAH-----LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E+ ILQ+++ PFL L F+ + +VME+ PGG++ + R+ G+ FSE
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEP 142
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
ARFY A+++L EYLH L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+WE+ +H L+ F+ +K LG G G V L + T H+AMK++D
Sbjct: 50 KWESPAQNTAH-----LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK 104
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E+ ILQ+++ PFL L F+ + +VME+ PGG++ + R+ G+ FSE
Sbjct: 105 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEP 162
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
ARFY A+++L EYLH L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 268 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 326 IYQRKVEAPFIPKFK 340
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+WE+ +H L+ F+ +K LG G G V L + T H+AMK++D
Sbjct: 22 KWESPAQNTAH-----LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK 76
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E+ ILQ+++ PFL L F+ + +VME+ PGG++ + R+ G+ FSE
Sbjct: 77 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEP 134
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
ARFY A+++L EYLH L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 240 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 298 IYQRKVEAPFIPKFK 312
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ PGG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+WE+ +H L+ F+ +K LG G G V L + T H+AMK++D
Sbjct: 30 KWESPAQNTAH-----LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E+ ILQ+++ PFL L F+ + +VME+ PGG++ + R+ G+ FSE
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEP 142
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
ARFY A+++L EYLH L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F+ +K LG G G V L + M T H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+WE+ +H L+ F+ +K LG G G V L + T H+AMK++D
Sbjct: 22 KWESPAQNTAH-----LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK 76
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E+ ILQ+++ PFL L F+ + +VME+ PGG++ + R+ G++ H
Sbjct: 77 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGRFXEPH 135
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
A RFY A+++L EYLH L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 136 A-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 240 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 298 IYQRKVEAPFIPKFK 312
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 17/198 (8%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMG---TKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
+ F+LLK LG G G V+L + + + +AMKV+ + ER+IL
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDILVE 83
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
++HPF+ L+ F+T+ L+++F GGDL ++ F+E +FY+AE+ LAL+
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 141
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQ 455
+LH LGIIYRDLKPEN+L+ E+GHI L+DF LS + E K S+C
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS-----------KESIDHEKKAYSFCGT 190
Query: 456 PACIEPTCVIQPDCIQPA 473
+ P V + Q A
Sbjct: 191 VEYMAPEVVNRRGHTQSA 208
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + T+ ++
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRL-AYRRGATEVKRHPFFQSVNWALI--RCAS 630
L P+ +S A+ L+R L + P +RL A G E+KRH FF +++W + R
Sbjct: 243 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 300
Query: 631 PPDVP 635
PP P
Sbjct: 301 PPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 107/198 (54%), Gaps = 17/198 (8%)
Query: 279 NHFKLLKRLGCGDIGSVYL-SELMGTKTH--FAMKVMDXXXXXXXXXXXXXQTEREILQS 335
+ F+LLK LG G G V+L ++ G+ +AMKV+ + ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDILVE 82
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
++HPF+ L+ F+T+ L+++F GGDL ++ F+E +FY+AE+ LAL+
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 140
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQ 455
+LH LGIIYRDLKPEN+L+ E+GHI L+DF LS + E K S+C
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS-----------KESIDHEKKAYSFCGT 189
Query: 456 PACIEPTCVIQPDCIQPA 473
+ P V + Q A
Sbjct: 190 VEYMAPEVVNRRGHTQSA 207
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + T+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRL-AYRRGATEVKRHPFFQSVNWALI--RCAS 630
L P+ +S A+ L+R L + P +RL A G E+KRH FF +++W + R
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 631 PPDVP 635
PP P
Sbjct: 300 PPFKP 304
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 16/188 (8%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPA 457
H L +IYRDLKPEN+L+ + G+I ++DF + R VK + +L C P
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-------VKGATWTL-------CGTPE 224
Query: 458 CIEPTCVI 465
+ P ++
Sbjct: 225 YLAPEIIL 232
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ + + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 208 FAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 268 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 326 IYQRKVEAPFIPKFK 340
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 144
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ E G+I ++DF + R
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 174 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 233
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 234 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 291
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 292 IYQRKVEAPFIPKFK 306
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 107/198 (54%), Gaps = 17/198 (8%)
Query: 279 NHFKLLKRLGCGDIGSVYL-SELMGTKTH--FAMKVMDXXXXXXXXXXXXXQTEREILQS 335
+ F+LLK LG G G V+L ++ G+ +AMKV+ + ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDILVE 82
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
++HPF+ L+ F+T+ L+++F GGDL ++ F+E +FY+AE+ LAL+
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 140
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQ 455
+LH LGIIYRDLKPEN+L+ E+GHI L+DF LS + E K S+C
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS-----------KESIDHEKKAYSFCGT 189
Query: 456 PACIEPTCVIQPDCIQPA 473
+ P V + Q A
Sbjct: 190 VEYMAPEVVNRRGHTQSA 207
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + T+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRL-AYRRGATEVKRHPFFQSVNWALI--RCAS 630
L P+ +S A+ L+R L + P +RL A G E+KRH FF +++W + R
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 631 PPDVP 635
PP P
Sbjct: 300 PPFKP 304
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 16/188 (8%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPA 457
H L +IYRDLKPEN+L+ + G+I ++DF + R ++ + C P
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--------------VKGRTWXLCGTPE 203
Query: 458 CIEPTCVI 465
+ P ++
Sbjct: 204 ALAPEIIL 211
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT E LAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+WE+ +H L+ F+ ++ LG G G V L + T H+AMK++D
Sbjct: 30 KWESPAQNTAH-----LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E+ I Q+++ PFL L F+ + +V+E+ PGG++ + R+ G+ FSE
Sbjct: 85 QIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS-HLRRIGR-FSEP 142
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
ARFY A+++L EYLH L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +Y++ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 16/188 (8%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPA 457
H L +IYRDLKPEN+L+ + G+I ++DF + R ++ + C P
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--------------VKGRTWXLCGTPE 203
Query: 458 CIEPTCVI 465
+ P ++
Sbjct: 204 YLAPAIIL 211
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAP II +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 248 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 306 IYQRKVEAPFIPKFK 320
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 16/188 (8%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPA 457
H L +IYRDLKPEN+++ + G+I ++DF + R ++ + C P
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR--------------VKGRTWXLCGTPE 203
Query: 458 CIEPTCVI 465
+ P +I
Sbjct: 204 YLAPEIII 211
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ FSE ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 100/191 (52%), Gaps = 14/191 (7%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL- 333
SLGL F LL+ +G G V L L T +AMKV+ QTE+ +
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
Q+ +HPFL L++ F+T+ V+E+ GGDL QRQ + E ARFY AE+ LA
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLA 133
Query: 394 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYC 453
L YLH GIIYRDLK +NVL+ +GHI L+D+ +C ++ +T+ +C
Sbjct: 134 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY------GMCKEGLRPGDTT-----SXFC 182
Query: 454 VQPACIEPTCV 464
P I P +
Sbjct: 183 GTPNYIAPEIL 193
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 15/135 (11%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT--------LFN 569
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF G+ LF
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
Query: 570 VV-GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAY--RRGATEVKRHPFFQSVNWALI 626
V+ + +R P S SV A+ +++ L K+P+ RL + G +++ HPFF++V+W ++
Sbjct: 241 VILEKQIRIPRSMSVKAAS--VLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMM 298
Query: 627 RCASPPDVPKQKPAV 641
VP KP +
Sbjct: 299 EQKQV--VPPFKPNI 311
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 17/189 (8%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM---GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
+HF+LLK LG G G V+L + + +AMKV+ + ER+IL
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL-KKATLKVRDRVRTKMERDILAD 86
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
++HPF+ L+ F+T+ L+++F GGDL ++ F+E +FY+AE+ L L+
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLD 144
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQ 455
+LH LGIIYRDLKPEN+L+ E+GHI L+DF LS E K S+C
Sbjct: 145 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS-----------KEAIDHEKKAYSFCGT 193
Query: 456 PACIEPTCV 464
+ P V
Sbjct: 194 VEYMAPEVV 202
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 9/131 (6%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
++ SF GT EY+APE++ +GH + DWW++G+ ++E+L G PF+G + T+ ++
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNWALI--RCAS 630
L P+ +S A+ L+R L + P +RL GA E+KRH F+ +++W + R
Sbjct: 246 KLGMPQ--FLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIK 303
Query: 631 PPDVPKQKPAV 641
PP KPAV
Sbjct: 304 PP----FKPAV 310
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL- 333
SLGL F LL+ +G G V L L T +AM+V+ QTE+ +
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
Q+ +HPFL L++ F+T+ V+E+ GGDL QRQ + E ARFY AE+ LA
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLA 165
Query: 394 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYC 453
L YLH GIIYRDLK +NVL+ +GHI L+D+ +C ++ +T+ ++C
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY------GMCKEGLRPGDTT-----STFC 214
Query: 454 VQPACIEPTCV 464
P I P +
Sbjct: 215 GTPNYIAPEIL 225
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT--------LF 568
+F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF G+ LF
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271
Query: 569 NVV-GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAY--RRGATEVKRHPFFQSVNWAL 625
V+ + +R P S SV A+ +++ L K+P+ RL + G +++ HPFF++V+W +
Sbjct: 272 QVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 329
Query: 626 IRCASPPDVPKQKPAV 641
+ VP KP +
Sbjct: 330 MEQKQV--VPPFKPNI 343
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G+ F+E ARFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FAEPHARFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 100/191 (52%), Gaps = 14/191 (7%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL- 333
SLGL F LL+ +G G V L L T +AMKV+ QTE+ +
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
Q+ +HPFL L++ F+T+ V+E+ GGDL QRQ + E ARFY AE+ LA
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLA 118
Query: 394 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYC 453
L YLH GIIYRDLK +NVL+ +GHI L+D+ +C ++ +T+ +C
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY------GMCKEGLRPGDTT-----SXFC 167
Query: 454 VQPACIEPTCV 464
P I P +
Sbjct: 168 GTPNYIAPEIL 178
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 15/135 (11%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT--------LFN 569
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF G+ LF
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 225
Query: 570 VV-GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAY--RRGATEVKRHPFFQSVNWALI 626
V+ + +R P S SV A+ +++ L K+P+ RL + G +++ HPFF++V+W ++
Sbjct: 226 VILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 283
Query: 627 RCASPPDVPKQKPAV 641
VP KP +
Sbjct: 284 EQKQV--VPPFKPNI 296
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 178
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 268 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 326 IYQRKVEAPFIPKFK 340
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 100/193 (51%), Gaps = 14/193 (7%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
M LGL F LL+ +G G V L L T +AMKV+ QTE+ +
Sbjct: 3 MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV 62
Query: 333 L-QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
Q+ +HPFL L++ F+T+ V+E+ GGDL QRQ + E ARFY AE+
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEIS 120
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
LAL YLH GIIYRDLK +NVL+ +GHI L+D+ +C ++ +T+
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY------GMCKEGLRPGDTT-----SX 169
Query: 452 YCVQPACIEPTCV 464
+C P I P +
Sbjct: 170 FCGTPNYIAPEIL 182
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 15/135 (11%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT--------LFN 569
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF G+ LF
Sbjct: 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
Query: 570 VV-GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAY--RRGATEVKRHPFFQSVNWALI 626
V+ + +R P S SV A+ +++ L K+P+ RL + G +++ HPFF++V+W ++
Sbjct: 230 VILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 287
Query: 627 RCASPPDVPKQKPAV 641
VP KP +
Sbjct: 288 EQKQV--VPPFKPNI 300
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 305 IYQRKVEAPFIPKFK 319
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L+ F +K LG G G V L + + H+AMK++D E+ ILQ+++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
PFL L F+ + +VME+ GG++ + R+ G++ HA RFY A+++L EYL
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGRFXEPHA-RFYAAQIVLTFEYL 152
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 182 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 241
Query: 567 LFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNWAL 625
+V +RFP S +DL+R LL + R + G ++K H +F + +W
Sbjct: 242 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 299
Query: 626 I--RCASPPDVPKQK 638
I R P +PK K
Sbjct: 300 IYQRKVEAPFIPKFK 314
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F LK LG G G V L T ++AMK++ TE +LQ+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R F+E ARFY AE++ ALE
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 122
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 154
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
+F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +R
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNW 623
FP ++S A+ L+ GLL K+P+ RL A EV H FF S+NW
Sbjct: 227 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 272
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 9/164 (5%)
Query: 271 SHMGSLGLNHFKLLKRLGCGDIGSVYLSELMG---TKTHFAMKVMDXXXXXXXXXXXX-X 326
H +G+ +F+LLK LG G G V+L + T +AMKV+
Sbjct: 46 GHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT 105
Query: 327 QTEREILQSLDH-PFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQPGKYFSEHAAR 384
+TER++L+ + PFL TL+ F+T+ L++++ GG+L L QR+ F+EH +
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQ 162
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YV E++LALE+LH LGIIYRD+K EN+L+ +GH++L+DF LS
Sbjct: 163 IYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 505 ELIAEPTSARSMSFVGTHEYLAPEIIKG--EGHGSAVDWWTFGIFLYELLFGKTPFKGAG 562
E +A+ T R+ F GT EY+AP+I++G GH AVDWW+ G+ +YELL G +PF G
Sbjct: 208 EFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
Query: 563 NRATLFNVVGQPLRF--PESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQ 619
+ + + + L+ P +S A+DLI+ LL+K+P+ RL R A E+K H FFQ
Sbjct: 267 EKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326
Query: 620 SVNWALIRCASPPDVPKQKPAVMD 643
+NW + P KP + D
Sbjct: 327 KINWDDLAAKKVP--APFKPVIRD 348
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F LK LG G G V L T ++AMK++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R F+E ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
+F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +R
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNW 623
FP ++S A+ L+ GLL K+P+ RL A EV H FF S+NW
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F LK LG G G V L T ++AMK++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R F+E ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
+F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +R
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNW 623
FP ++S A+ L+ GLL K+P+ RL A EV H FF S+NW
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F LK LG G G V L T ++AMK++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R F+E ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNW 623
P ++S A+ L+ GLL K+P+ RL A EV H FF S+NW
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F LK LG G G V L T ++AMK++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R F+E ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNW 623
P ++S A+ L+ GLL K+P+ RL A EV H FF S+NW
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F LK LG G G V L T ++AMK++ TE +LQ+
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R F+E ARFY AE++ ALE
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 124
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 156
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNW 623
P ++S A+ L+ GLL K+P+ RL A EV H FF S+NW
Sbjct: 230 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 274
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N F LK LG G G V L T ++AMK++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALE 395
HPFL L F+T C VME+ GG+L H R+R F+E ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNW 623
P ++S A+ L+ GLL K+P+ RL A EV H FF S+NW
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ- 334
LG+++F+ ++ LG G G V L+ + T +A+KV+ TE+ IL
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 335 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
+ +HPFL L+ F+T VMEF GGDL + Q + F E ARFY AE++ AL
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCV 454
+LH GIIYRDLK +NVL+ +GH L+DF + + +C + + ++C
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC-KEGICNGVTTA----------TFCG 186
Query: 455 QPACIEPTCVIQPDCIQPA 473
P I P ++Q PA
Sbjct: 187 TPDYIAPE-ILQEMLYGPA 204
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFN-VVGQ 573
+ +F GT +Y+APEI++ +G AVDWW G+ LYE+L G PF+ A N LF ++
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE-AENEDDLFEAILND 239
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLA--YRRGATEVKRHPFFQSVNWALI--RCA 629
+ +P + A +++ + K P RL + G + RHPFF+ ++WA + R
Sbjct: 240 EVVYP--TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQI 297
Query: 630 SPPDVPKQK 638
PP P+ K
Sbjct: 298 EPPFRPRIK 306
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L F++L+ LG G G V+L ++AMKV+ ER +L +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HPF+ ++ F+ + ++M++ GG+L +L ++ + F A+FY AEV LALEYL
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYL 122
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H IIYRDLKPEN+L+ ++GHI ++DF +
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFA 153
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT +Y+APE++ + + ++DWW+FGI +YE+L G TPF + T ++ LRFP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 580 SPSVSFAARDLIRGLLVKEPQHRLA-YRRGATEVKRHPFFQSVNW 623
P + +DL+ L+ ++ RL + G +VK HP+F+ V W
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW 267
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
L + F+L K LG G G V+L+E T FA+K + E+ +L
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 335 -SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ +HPFL ++ F+T + VME+ GGDL + Q F A FY AE++L
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILG 131
Query: 394 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYC 453
L++LH GI+YRDLK +N+L+ +DGHI ++DF +C N ++K +C
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADF------GMC-----KENMLGDAKTNEFC 180
Query: 454 VQPACIEPTCVI 465
P I P ++
Sbjct: 181 GTPDYIAPEILL 192
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
A++ F GT +Y+APEI+ G+ + +VDWW+FG+ LYE+L G++PF G ++
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALI--RCA 629
+P + A+DL+ L V+EP+ RL R ++++HP F+ +NW + +
Sbjct: 233 MDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 287
Query: 630 SPPDVPKQK 638
PP PK K
Sbjct: 288 DPPFRPKVK 296
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL-QSLDHP 339
F LK +G G G V L+ + +A+KV+ +ER +L +++ HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 340 FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHM 399
FL L+ F+T V+++ GG+L QR+ + F E ARFY AE+ AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS 157
Query: 400 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACI 459
L I+YRDLKPEN+L+ GHI+L+DF L C N S ++C P +
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGL---C--------KENIEHNSTTSTFCGTPEYL 206
Query: 460 EPTCV 464
P +
Sbjct: 207 APEVL 211
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
++ + +F GT EYLAPE++ + + VDWW G LYE+L+G PF N++
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNW 623
+PL+ P+++ +AR L+ GLL K+ RL + E+K H FF +NW
Sbjct: 253 NKPLQL--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINW 302
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ SFVGT +Y++PE++ + + D W G +Y+
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 228 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 282
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 283 MEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 225 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 279
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 280 MEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 227 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 281
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 282 MEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 228 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 282
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 283 MEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ +FVGT +Y++PE++ + + D W G +Y+
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 225 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 279
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 280 MEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 551 LLFGKTPFKGAGNRATLF-NVVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 227 LVAGLPPFR-AGNEGLIFAKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 281
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 282 MEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQ 226
Query: 551 LLFGKTPFKGAGNRATLF-NVVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 227 LVAGLPPFR-AGNEGLIFAKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 281
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 282 MEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR--R 607
L+ G PF+ AGN +F ++ FPE ARDL+ LLV + RL
Sbjct: 227 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEME 283
Query: 608 GATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 284 GYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 225 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 279
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 280 MEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 227 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 281
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 282 MEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDF 179
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 170 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 229
Query: 551 LLFGKTPFKGAGNRATLFNVVGQPLRFPESPSVSF-AARDLIRGLLVKEPQHRLAYR--R 607
L+ G PF+ AGN +F + + L + + P+ F ARDL+ LLV + RL
Sbjct: 230 LVAGLPPFR-AGNEYLIFQKIIK-LEY-DFPAAFFPKARDLVEKLLVLDATKRLGCEEME 286
Query: 608 GATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 287 GYGPLKAHPFFESVTWENLHQQTPPKL 313
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDF 153
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 144 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 203
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR--R 607
L+ G PF+ AGN +F ++ FPE ARDL+ LLV + RL
Sbjct: 204 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEME 260
Query: 608 GATEVKRHPFFQSVNWALIRCASPP 632
G +K HPFF+SV W + +PP
Sbjct: 261 GYGPLKAHPFFESVTWENLHQQTPP 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDF 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 143 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 202
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 203 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 257
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 258 MEGYGPLKAHPFFESVTWENLHQQTPPKL 286
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDF 154
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 145 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 204
Query: 551 LLFGKTPFKGAGNRATLF-NVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR--R 607
L+ G PF+ AGN +F ++ FPE ARDL+ LLV + RL
Sbjct: 205 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEME 261
Query: 608 GATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 262 GYGPLKAHPFFESVTWENLHQQTPPKL 288
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDF 151
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 142 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 201
Query: 551 LLFGKTPFKGAGNRATLF-NVVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 202 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 256
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 257 MEGYGPLKAHPFFESVTWENLHQQTPPKL 285
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 88/154 (57%), Gaps = 2/154 (1%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
+ +HF++L+ +G G G V + + TK +AMK M+ E +I+Q
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 335 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
L+HPFL L+ F+ ++ +V++ GGDL Q +F E + ++ E+++AL
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKEETVKLFICELVMAL 128
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+YL II+RD+KP+N+L+ E GH+ ++DF+++
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 510 PTSARSMSFVGTHEYLAPEII---KGEGHGSAVDWWTFGIFLYELLFGKTPF---KGAGN 563
P + + GT Y+APE+ KG G+ AVDWW+ G+ YELL G+ P+ +
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 564 RATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNW 623
+ + + +P + S + L++ LL P R + ++V+ P+ +NW
Sbjct: 226 KEIVHTFETTVVTYPSAWSQEMVS--LLKKLLEPNPDQRFS---QLSDVQNFPYMNDINW 280
Query: 624 ALI 626
+
Sbjct: 281 DAV 283
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 495 EMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYEL 551
+MH Q++ L E AR+ SFVGT +Y++PE++ + + D W G +Y+L
Sbjct: 165 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 224
Query: 552 LFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR-- 606
+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 225 VAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEEM 279
Query: 607 RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 280 EGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
L + F L K LG G G V+L+E T FA+K + E+ +L
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 335 -SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ +HPFL ++ F+T + VME+ GGDL + Q F A FY AE++L
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILG 130
Query: 394 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYC 453
L++LH GI+YRDLK +N+L+ +DGHI ++DF +C N ++K +C
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADF------GMC-----KENMLGDAKTNXFC 179
Query: 454 VQPACIEPTCVI 465
P I P ++
Sbjct: 180 GTPDYIAPEILL 191
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
A++ F GT +Y+APEI+ G+ + +VDWW+FG+ LYE+L G++PF G ++
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALI--RCA 629
+P + A+DL+ L V+EP+ RL R ++++HP F+ +NW + +
Sbjct: 232 MDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 286
Query: 630 SPPDVPKQK 638
PP PK K
Sbjct: 287 DPPFRPKVK 295
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDF 158
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 149 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 208
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 209 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 263
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 264 MEGYGPLKAHPFFESVTWENLHQQTPPKL 292
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 495 EMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYEL 551
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+L
Sbjct: 165 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 224
Query: 552 LFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR-- 606
+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 225 VAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEEM 279
Query: 607 RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 280 EGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDF 181
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 172 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 231
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 232 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 286
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 287 MEGYGPLKAHPFFESVTWENLHQQTPPKL 315
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G + L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ FVGT +Y++PE++ + + D W G +Y+
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 225 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 279
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 280 MEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK K LG G +V L+ + T +A+K+++ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY F+ D+ + + G L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Query: 494 NEMHNQVSPLPE---LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYE 550
+MH Q++ L E AR+ SFVGT +Y++PE++ + + D W G +Y+
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQ 226
Query: 551 LLFGKTPFKGAGNRATLFN-VVGQPLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYR- 606
L+ G PF+ AGN +F ++ FPE P ARDL+ LLV + RL
Sbjct: 227 LVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEE 281
Query: 607 -RGATEVKRHPFFQSVNWALIRCASPPDV 634
G +K HPFF+SV W + +PP +
Sbjct: 282 MEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 281 FKLLKRLGCGDIGSVY-LSELMGTKTH--FAMKVMDXXXXXXXXXXXX-XQTEREILQSL 336
F+LL+ LG G G V+ + ++ G T FAMKV+ + ER IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HPF+ L F+T L++E+ GG+L +R+ F E A FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGH 136
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
LH GIIYRDLKPEN+++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G + T+ ++ L
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRG-ATEVKRHPFFQSVNWA--LIRCASPPDV 634
P P ++ ARDL++ LL + RL G A EV+ HPFF+ +NW L R PP
Sbjct: 241 P--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 635 P 635
P
Sbjct: 299 P 299
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 281 FKLLKRLGCGDIGSVY-LSELMGTKTH--FAMKVMDXXXXXXXXXXXX-XQTEREILQSL 336
F+LL+ LG G G V+ + ++ G T FAMKV+ + ER IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HPF+ L F+T L++E+ GG+L +R+ F E A FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGH 136
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
LH GIIYRDLKPEN+++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
+F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G + T+ ++ L
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHRLAYRRG-ATEVKRHPFFQSVNWA--LIRCASPPD 633
P P ++ ARDL++ LL + RL G A EV+ HPFF+ +NW L R PP
Sbjct: 240 LP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 634 VP 635
P
Sbjct: 298 KP 299
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
++++K +G G G V L T+ +AMK++ ER+I+ + P+
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L+ F+ D++ +VME+ PGGDL L E ARFY AEV+LAL+ +H +
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALDAIHSM 187
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
G I+RD+KP+N+L+ + GH+ L+DF
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADF 212
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 519 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
Query: 575 --LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWAL--IRCAS 630
L FP+ +S A++LI L + + RL R G E+KRH FF++ WA +R
Sbjct: 290 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 347
Query: 631 PPDVP 635
P VP
Sbjct: 348 APVVP 352
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
++++K +G G G V L T+ +AMK++ ER+I+ + P+
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L+ F+ D++ +VME+ PGGDL L E ARFY AEV+LAL+ +H +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALDAIHSM 192
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
G I+RD+KP+N+L+ + GH+ L+DF
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 519 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 575 --LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWAL--IRCAS 630
L FP+ +S A++LI L + + RL R G E+KRH FF++ WA +R
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 631 PPDVP 635
P VP
Sbjct: 353 APVVP 357
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
++++K +G G G V L T+ +AMK++ ER+I+ + P+
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L+ F+ D++ +VME+ PGGDL L E ARFY AEV+LAL+ +H +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALDAIHSM 192
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
G I+RD+KP+N+L+ + GH+ L+DF
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 519 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 575 --LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWAL--IRCAS 630
L FP+ +S A++LI L + + RL R G E+KRH FF++ WA +R
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 631 PPDVP 635
P VP
Sbjct: 353 APVVP 357
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 14/195 (7%)
Query: 271 SHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTER 330
+++ + L F L LG G G V L++ GT+ +A+K++ E+
Sbjct: 11 NNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEK 70
Query: 331 EILQSLDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAE 389
+L LD P FL L++ F+T VME+ GGDL Q Q GK F E A FY AE
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGK-FKEPQAVFYAAE 128
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKN 449
+ + L +LH GIIYRDLK +NV++ +GHI ++DF +C + T+ E
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADF------GMCKEHMMDGVTTRE--- 179
Query: 450 LSYCVQPACIEPTCV 464
+C P I P +
Sbjct: 180 --FCGTPDYIAPEII 192
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
F GT +Y+APEII + +G +VDWW +G+ LYE+L G+ PF G +++ +
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS 238
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNWALI--RCASPPD 633
+P+ S+S A + +GL+ K P RL G +V+ H FF+ ++W + R PP
Sbjct: 239 YPK--SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPF 296
Query: 634 VPK 636
PK
Sbjct: 297 KPK 299
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ ++K +G G G V L ++ +AMK++ ER+I+ + P+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L+ F+ DK+ +VME+ PGGDL L E A+FY AEV+LAL+ +H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLALDAIHSM 193
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
G+I+RD+KP+N+L+ + GH+ L+DF
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADF 218
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 519 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T ++
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 575 --LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS--VNWALIRCAS 630
L FPE +S A++LI L + + RL R G E+K+HPFF++ NW IR +
Sbjct: 296 NSLCFPEDAEISKHAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 631 PPDVPK 636
P VP+
Sbjct: 354 APVVPE 359
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
Query: 256 HKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXX 315
+ A+ ++W VR L + F++LK +G G V + ++ T +AMK+M+
Sbjct: 38 YVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW 97
Query: 316 XXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPG 375
+ ER++L + D ++ L+ F+ + + LVME+ GGDL L + G
Sbjct: 98 DMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF-G 156
Query: 376 KYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
+ ARFY+AE+++A++ +H LG ++RD+KP+N+L+ GHI L+DF L+
Sbjct: 157 ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 512 SARSMSFVGTHEYLAPEIIKG-------EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNR 564
+ RS+ VGT +YL+PEI++ +G DWW G+F YE+ +G+TPF
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276
Query: 565 ATLFNVV--GQPLRFP-ESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
T +V + L P V ARD I+ LL P+ RL R GA + + HPFF +
Sbjct: 277 ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGL 334
Query: 622 NWALIRCASPPDVPKQKPA 640
+W +R + PP P + A
Sbjct: 335 DWDGLRDSVPPFTPDFEGA 353
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F++LK +G G G V + +L FAMK+++ + ER++L + D +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ TL+ F+ D LVM++ GGDL L + + E ARFY+AE+++A++ +H L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQL 194
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
++RD+KP+N+L+ +GHI L+DF L+
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGA 561
+ E + +S VGT +Y++PEI++ G+G +G DWW+ G+ +YE+L+G+TPF
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 562 GNRATLFNVVGQPLRF---PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
T ++ RF + VS A+DLIR L+ +HRL + G + K+HPFF
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLG-QNGIEDFKKHPFF 342
Query: 619 QSVNWALIRCASPPDVPK 636
++W IR P +P+
Sbjct: 343 SGIDWDNIRNCEAPYIPE 360
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F+++K +G G G V + ++ T+ +AMK+++ + ER++L + D +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L+ F+ + LVM++ GGDL L + K E ARFY+ E++LA++ +H L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 210
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
++RD+KP+NVL+ +GHI L+DF L+
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLK 240
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 512 SARSMSFVGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
+ +S VGT +Y++PEI++ G G +G DWW+ G+ +YE+L+G+TPF T
Sbjct: 246 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 305
Query: 567 LFNVVGQPLRFPESPS----VSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN 622
++ RF + PS VS A+DLI+ L+ + RL + G + K+H FF+ +N
Sbjct: 306 YGKIMNHEERF-QFPSHVTDVSEEAKDLIQRLICSR-ERRLG-QNGIEDFKKHAFFEGLN 362
Query: 623 WALIRCASPPDVP 635
W IR P +P
Sbjct: 363 WENIRNLEAPYIP 375
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F+++K +G G G V + ++ T+ +AMK+++ + ER++L + D +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L+ F+ + LVM++ GGDL L + K E ARFY+ E++LA++ +H L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 194
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
++RD+KP+NVL+ +GHI L+DF L+
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLK 224
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 512 SARSMSFVGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
+ +S VGT +Y++PEI++ G G +G DWW+ G+ +YE+L+G+TPF T
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 567 LFNVVGQPLRFPESPS----VSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN 622
++ RF + PS VS A+DLI+ L+ + RL + G + K+H FF+ +N
Sbjct: 290 YGKIMNHEERF-QFPSHVTDVSEEAKDLIQRLICSR-ERRLG-QNGIEDFKKHAFFEGLN 346
Query: 623 WALIRCASPPDVP 635
W IR P +P
Sbjct: 347 WENIRNLEAPYIP 359
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
+ L F L LG G G V LSE GT +A+K++ E+ +L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 336 LDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
P FL L++ F+T VME+ GGDL Q Q G++ HA FY AE+ + L
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAV-FYAAEIAIGL 455
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+L GIIYRDLK +NV++ +GHI ++DF +
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT +Y+APEII + +G +VDWW FG+ LYE+L G+ PF+G +++ + +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNWALI--RCASPPDV 634
P+S S A + +GL+ K P RL G ++K H FF+ ++W + + PP
Sbjct: 562 PKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 619
Query: 635 PK 636
PK
Sbjct: 620 PK 621
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 261 VRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXX 320
++W+ ++A +G + F + LG G G V+ ++ T +A K ++
Sbjct: 172 LQWKWLEAQ-----PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 321 XXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HALRQRQPGK 376
E++IL + F+ +L FET CLVM GGD+ + + + PG
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG- 285
Query: 377 YFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPT 436
F E A FY A+++ LE+LH IIYRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 -FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 437 LVKS 440
K
Sbjct: 345 KTKG 348
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAG----NRATLFN 569
++ + GT ++APE++ GE + +VD++ G+ LYE++ + PF+ G N+
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 570 VVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATE-VKRHPFFQSVNWALIRC 628
V+ Q + +P+ S A++D LL K+P+ RL +R G+ + ++ HP F+ ++W +
Sbjct: 405 VLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 629 A--SPPDVPKQK 638
+PP VP +
Sbjct: 463 GMLTPPFVPDSR 474
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 261 VRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXX 320
++W+ ++A +G + F + LG G G V+ ++ T +A K ++
Sbjct: 172 LQWKWLEAQ-----PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 321 XXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HALRQRQPGK 376
E++IL + F+ +L FET CLVM GGD+ + + + PG
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG- 285
Query: 377 YFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPT 436
F E A FY A+++ LE+LH IIYRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 -FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 437 LVKS 440
K
Sbjct: 345 KTKG 348
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAG----NRATLFN 569
++ + GT ++APE++ GE + +VD++ G+ LYE++ + PF+ G N+
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 570 VVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATE-VKRHPFFQSVNWALIRC 628
V+ Q + +P+ S A++D LL K+P+ RL +R G+ + ++ HP F+ ++W +
Sbjct: 405 VLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 629 A--SPPDVPKQK 638
+PP VP +
Sbjct: 463 GMLTPPFVPDSR 474
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 261 VRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXX 320
++W+ ++A +G + F + LG G G V+ ++ T +A K ++
Sbjct: 172 LQWKWLEAQ-----PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 321 XXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HALRQRQPGK 376
E++IL + F+ +L FET CLVM GGD+ + + + PG
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG- 285
Query: 377 YFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPT 436
F E A FY A+++ LE+LH IIYRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 -FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 437 LVKS 440
K
Sbjct: 345 KTKG 348
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAG----NRATLFN 569
++ + GT ++APE++ GE + +VD++ G+ LYE++ + PF+ G N+
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 570 VVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATE-VKRHPFFQSVNWALIRC 628
V+ Q + +P+ S A++D LL K+P+ RL +R G+ + ++ HP F+ ++W +
Sbjct: 405 VLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 629 A--SPPDVPKQK 638
+PP VP +
Sbjct: 463 GMLTPPFVPDSR 474
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 261 VRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXX 320
++W+ ++A +G + F + LG G G V+ ++ T +A K ++
Sbjct: 172 LQWKWLEAQ-----PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 321 XXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HALRQRQPGK 376
E++IL + F+ +L FET CLVM GGD+ + + + PG
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG- 285
Query: 377 YFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPT 436
F E A FY A+++ LE+LH IIYRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 -FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 437 LVKS 440
K
Sbjct: 345 KTKG 348
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAG----NRATLFN 569
++ + GT ++APE++ GE + +VD++ G+ LYE++ + PF+ G N+
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 570 VVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATE-VKRHPFFQSVNWALIRC 628
V+ Q + +P+ S A++D LL K+P+ RL +R G+ + ++ HP F+ ++W +
Sbjct: 405 VLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 629 A--SPPDVPKQK 638
+PP VP +
Sbjct: 463 GMLTPPFVPDSR 474
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
+ L F L LG G G V LSE GT +A+K++ E+ +L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 336 LDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
P FL L++ F+T VME+ GGDL Q Q G++ HA FY AE+ + L
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAV-FYAAEIAIGL 134
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+L GIIYRDLK +NV++ +GHI ++DF +
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT +Y+APEII + +G +VDWW FG+ LYE+L G+ PF+G +++ + +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYR-RGATEVKRHPFFQSVNWALI--RCASPPDV 634
P+S S A + +GL+ K P RL G ++K H FF+ ++W + + PP
Sbjct: 241 PKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 298
Query: 635 PK 636
PK
Sbjct: 299 PK 300
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
L +N F + + +G G G VY T +AMK +D ER +L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 336 L---DHPFLPTLYTHFET-DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+ D PF+ + F T DK S +++ GGDLH Q G FSE RFY AE++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHG-VFSEADMRFYAAEII 301
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L LE++H ++YRDLKP N+L+ E GH+ +SD L+
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 497 HNQVSPLPELIAEPTSARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGK 555
H ++S L L + + + + VGTH Y+APE++ KG + S+ DW++ G L++LL G
Sbjct: 329 HVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 387
Query: 556 TPF-------KGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRR 607
+PF K +R TL V P F SP + R L+ GLL ++ RL R
Sbjct: 388 SPFRQHKTKDKHEIDRMTLTMAVELPDSF--SPEL----RSLLEGLLQRDVNRRLGCLGR 441
Query: 608 GATEVKRHPFFQSVNWALIRCAS--PPDVP 635
GA EVK PFF+S++W ++ PP +P
Sbjct: 442 GAQEVKESPFFRSLDWQMVFLQKYPPPLIP 471
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
L +N F + + +G G G VY T +AMK +D ER +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 336 L---DHPFLPTLYTHFET-DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+ D PF+ + F T DK S +++ GGDLH Q G FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHG-VFSEADMRFYAAEII 302
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L LE++H ++YRDLKP N+L+ E GH+ +SD L+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 497 HNQVSPLPELIAEPTSARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGK 555
H ++S L L + + + + VGTH Y+APE++ KG + S+ DW++ G L++LL G
Sbjct: 330 HVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
Query: 556 TPF-------KGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRR 607
+PF K +R TL V P F SP + R L+ GLL ++ RL R
Sbjct: 389 SPFRQHKTKDKHEIDRMTLTMAVELPDSF--SPEL----RSLLEGLLQRDVNRRLGCLGR 442
Query: 608 GATEVKRHPFFQSVNWALIRCAS--PPDVP 635
GA EVK PFF+S++W ++ PP +P
Sbjct: 443 GAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
L +N F + + +G G G VY T +AMK +D ER +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 336 L---DHPFLPTLYTHFET-DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+ D PF+ + F T DK S +++ GGDLH Q G FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHG-VFSEADMRFYAAEII 302
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L LE++H ++YRDLKP N+L+ E GH+ +SD L+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 497 HNQVSPLPELIAEPTSARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGK 555
H ++S L L + + + + VGTH Y+APE++ KG + S+ DW++ G L++LL G
Sbjct: 330 HVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
Query: 556 TPF-------KGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRR 607
+PF K +R TL V P F SP + R L+ GLL ++ RL R
Sbjct: 389 SPFRQHKTKDKHEIDRMTLTMAVELPDSF--SPEL----RSLLEGLLQRDVNRRLGCLGR 442
Query: 608 GATEVKRHPFFQSVNWALIRCAS--PPDVP 635
GA EVK PFF+S++W ++ PP +P
Sbjct: 443 GAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
L +N F + + +G G G VY T +AMK +D ER +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 336 L---DHPFLPTLYTHFET-DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+ D PF+ + F T DK S +++ GGDLH Q G FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHG-VFSEADMRFYAAEII 302
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L LE++H ++YRDLKP N+L+ E GH+ +SD L+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 497 HNQVSPLPELIAEPTSARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGK 555
H ++S L L + + + + VGTH Y+APE++ KG + S+ DW++ G L++LL G
Sbjct: 330 HVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
Query: 556 TPF-------KGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLA-YRR 607
+PF K +R TL V P F SP + R L+ GLL ++ RL R
Sbjct: 389 SPFRQHKTKDKHEIDRMTLTMAVELPDSF--SPEL----RSLLEGLLQRDVNRRLGCLGR 442
Query: 608 GATEVKRHPFFQSVNWALIRCAS--PPDVP 635
GA EVK PFF+S++W ++ PP +P
Sbjct: 443 GAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
N F+ + LG G G V ++ T +A K ++ E++IL+ ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALEY 396
F+ +L +ET CLV+ GGDL H Q G F E A FY AE+ LE
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLED 301
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL 429
LH I+YRDLKPEN+L+ + GHI +SD L++
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 497 HNQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKT 556
H ++S L + P VGT Y+APE++K E + + DWW G LYE++ G++
Sbjct: 324 HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
Query: 557 PFKGAGNRATLFNVVGQPLRFPESPSVSFA--ARDLIRGLLVKEPQHRLAYRRG-ATEVK 613
PF+ + V PE S F+ AR L LL K+P RL R G A EVK
Sbjct: 384 PFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVK 443
Query: 614 RHPFFQSVNW 623
HP F+ +N+
Sbjct: 444 EHPLFKKLNF 453
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
N F+ + LG G G V ++ T +A K ++ E++IL+ ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALEY 396
F+ +L +ET CLV+ GGDL H Q G F E A FY AE+ LE
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLED 301
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL 429
LH I+YRDLKPEN+L+ + GHI +SD L++
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 497 HNQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKT 556
H ++S L + P VGT Y+APE++K E + + DWW G LYE++ G++
Sbjct: 324 HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
Query: 557 PFKGAGNRATLFNVVGQPLRFPESPSVSFA--ARDLIRGLLVKEPQHRLAYRRG-ATEVK 613
PF+ + V PE S F+ AR L LL K+P RL R G A EVK
Sbjct: 384 PFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVK 443
Query: 614 RHPFFQSVNW 623
HP F+ +N+
Sbjct: 444 EHPLFKKLNF 453
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 91/343 (26%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F+ + LG G V L+E T FA+K + + E +L+ + H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCI--PKKALKGKESSIENEIAVLRKIKHEN 81
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L +E+ LVM+ GG+L R + G +++E A + +VL A+ YLH +
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFD-RIVEKG-FYTEKDASTLIRQVLDAVYYLHRM 139
Query: 401 GIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPA 457
GI++RDLKPEN+L E+ IM+SDF LS +E K
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLS---------------KMEGKG-------- 176
Query: 458 CIEPTCVIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMS 517
D + AC P ++ PE++A+ ++++
Sbjct: 177 ----------DVMSTACGTPGYVA----------------------PEVLAQKPYSKAV- 203
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
D W+ G+ Y LL G PF + ++ F
Sbjct: 204 ----------------------DCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF 241
Query: 578 --PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P +S +A+D IR L+ K+P R + A RHP+
Sbjct: 242 DSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWI 280
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 273 MGS--LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTER 330
MGS L F++ + LG G G+VYL+ +K A+KV+ + E
Sbjct: 3 MGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 331 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEV 390
EI L HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITEL 120
Query: 391 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
AL Y H +I+RD+KPEN+L+ G + ++DF S+ R A+C TL
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 173
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R A+C TL
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 268 AVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQ 327
A+ S L F++ + LG G G+VYL+ +K A+KV+ +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E EI L HP + LY +F L++E+ P G+++ ++ Q F E Y+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYI 119
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
S+R + GT +YL PE+I+G H VD W+ G+ YE L GK PF+ + T +
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASP 631
FP+ V+ ARDLI LL P R R EV HP+ + + C +
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITANSSKPSNCQNK 278
Query: 632 PDVPKQ 637
KQ
Sbjct: 279 ESASKQ 284
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 268 AVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQ 327
A+ S L F++ + LG G G+VYL+ +K A+KV+ +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E EI L HP + LY +F L++E+ P G ++ R+ Q F E Y+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYI 119
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R A+C TL
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
FK+ LG G VY +E + T A+K++D Q E +I L HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQPGKYFSEHAARFYVAEVLLALEYLHM 399
+ LY +FE + LV+E C G+++ L+ R K FSE+ AR ++ +++ + YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHS 130
Query: 400 LGIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI++RDL N+L+ + +I ++DF L+
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLA 159
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
+ GT Y++PEI HG D W+ G Y LL G+ PF + TL VV L
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV---LA 227
Query: 577 FPESPS-VSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
E PS +S A+DLI LL + P RL+ + V HPF
Sbjct: 228 DYEMPSFLSIEAKDLIHQLLRRNPADRLS----LSSVLDHPFM 266
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 149
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 196
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 140
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 187
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 128
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 271 SHMGS---LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQ 327
SHM L F++ + LG G G+VYL+ +K A+KV+ +
Sbjct: 2 SHMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E EI L HP + LY +F L++E+ P G ++ R+ Q F E Y+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYI 119
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 175
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 170
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 173
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
++ F +++ LG G G+VYL+ K A+KV+ + E EI L
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + +Y +F K L++EF P G+L+ Q+ G++ + +A F + E+ AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATF-MEELADALHYC 130
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTLVKSSNTSLESKNLS 451
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL +E K
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 452 YCVQPACIEPTC 463
V C C
Sbjct: 191 EKVDLWCAGVLC 202
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
S R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS 620
L+FP P +S ++DLI LL P RL +G E HP+ ++
Sbjct: 226 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPL-KGVME---HPWVKA 268
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 273 MGS---LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTE 329
MGS L F++ + LG G G+VYL+ +K A+KV+ + E
Sbjct: 3 MGSKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 62
Query: 330 REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAE 389
EI L HP + LY +F L++E+ P G ++ R+ Q F E Y+ E
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITE 120
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 174
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTL 170
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L F + + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYC 128
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ +G + ++DF S+ R +C TL
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTL 174
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 125
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 172
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 268 AVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQ 327
A+ S L F++ + LG G G+VYL+ +K A+KV+ +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E EI L HP + LY +F L++E+ P G+++ ++ Q F E Y+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYI 119
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL 429
E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
S+R GT +YL PE+I+G H VD W+ G+ YE L GK PF+ + T +
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASP 631
FP+ V+ ARDLI LL P R R EV HP+ + + C +
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITANSSKPSNCQNK 278
Query: 632 PDVPKQ 637
KQ
Sbjct: 279 ESASKQ 284
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 171
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 149
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL 196
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 122
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 169
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 173
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 170
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL 170
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTL 171
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 170
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L F + + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYC 128
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ +G + ++DF S+ R +C TL
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTL 174
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 170
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 125
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + +++F S+ R +C TL
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL 172
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 173
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
++ F + + LG G G+VYL+ K A+KV+ + E EI L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + +Y +F K L++EF P G+L+ Q+ G++ + +A F + E+ AL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATF-MEELADALHYC 131
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTLVKSSNTSLESKNLS 451
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL +E K
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 452 YCVQPACIEPTC 463
V C C
Sbjct: 192 EKVDLWCAGVLC 203
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
S R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 167 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS 620
L+FP P +S ++DLI LL P RL +G E HP+ ++
Sbjct: 227 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPL-KGVME---HPWVKA 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
++ F + + LG G G+VYL+ K A+KV+ + E EI L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + +Y +F K L++EF P G+L+ Q+ G++ + +A F + E+ AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATF-MEELADALHYC 130
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTLVKSSNTSLESKNLS 451
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL +E K
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 452 YCVQPACIEPTC 463
V C C
Sbjct: 191 EKVDLWCAGVLC 202
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
S R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS 620
L+FP P +S ++DLI LL P RL +G E HP+ ++
Sbjct: 226 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPL-KGVME---HPWVKA 268
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ K A+KV+ + E EI L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 120
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 167
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + +++F S+ R +C TL
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL 173
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +I+RD+KPEN+L+ G + ++DF S
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
L F++ + LG G G+VYL+ +K A+KV+ + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + LY +F L++E+ P G ++ R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTL 437
H +I+RD+KPEN+L+ G + ++DF S+ R +C TL
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL 173
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++ +K+LG G G V L + T A+K++ E +L+ LDH
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLH---ALRQRQPGKYFSEHAARFYVAEVLLALE 395
P + LY FE + LVME GG+L LRQ+ FSE A + +VL
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTT 135
Query: 396 YLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLS 428
YLH I++RDLKPEN+L+ D I + DF LS
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE+++ + + D W+ G+ LY LL G PF G ++ L V F
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P+ VS A+ L++ +L EP R++ A E HP+
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRIS----AEEALNHPWI 280
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++ +K+LG G G V L + T A+K++ E +L+ LDH
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLH---ALRQRQPGKYFSEHAARFYVAEVLLALE 395
P + LY FE + LVME GG+L LRQ+ FSE A + +VL
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTT 118
Query: 396 YLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLS 428
YLH I++RDLKPEN+L+ D I + DF LS
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE+++ + + D W+ G+ LY LL G PF G ++ L V F
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P+ VS A+ L++ +L EP R++ A E HP+
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRIS----AEEALNHPWI 263
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
M L + +++LLK +G G+ V L+ + T A+K++D + R I
Sbjct: 1 MADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR-I 59
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
++ L+HP + L+ ET+K LVME+ GG++ + E AR +++
Sbjct: 60 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--WMKEKEARAKFRQIVS 117
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++Y H I++RDLK EN+L+ D +I ++DF S
Sbjct: 118 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHR 602
R P S +L++ L+ P R
Sbjct: 224 RIPFYMSTD--CENLLKKFLILNPSKR 248
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
S R + GT +YL PE+I+G H VD W G+ YELL G PF+ A + T +V
Sbjct: 175 SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS 620
L+FP SV A+DLI LL P RL +V HP+ ++
Sbjct: 235 KVDLKFP--ASVPTGAQDLISKLLRHNPSERLPL----AQVSAHPWVRA 277
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHF--AMKVMDXXXXXXXXXXXXXQTEREILQS 335
++ F++ + LG G G+VYL+ K+HF A+KV+ + E EI
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAR--EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
L HP + LY +F + L++E+ P G+L+ ++ Q F E + E+ AL
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELADALM 137
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL------RCAVCPTLVKSSNTSLESKN 449
Y H +I+RD+KPEN+L+ G + ++DF S+ R +C TL +E +
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 450 LSYCVQPACIEPTC 463
+ V CI C
Sbjct: 198 HNEKVDLWCIGVLC 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
RW+ + +R + + LG G V L+E T+ A+K +
Sbjct: 9 RWKQAEDIR--------DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI--AKKALEG 58
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
+ E +L + HP + L +E+ L+M+ GG+L R + G Y
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERD 117
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVL---VREDGHIMLSDFDLS 428
A+R + +VL A++YLH LGI++RDLKPEN+L + ED IM+SDF LS
Sbjct: 118 ASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
+ +P S S + GT Y+APE++ + + AVD W+ G+ Y LL G PF N A
Sbjct: 168 MEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAK 225
Query: 567 LFNVVGQPLRFPESP---SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
LF + + +SP +S +A+D IR L+ K+P+ R + +HP+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT----CEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
RW+ + +R + + LG G V L+E T+ A+K +
Sbjct: 9 RWKQAEDIR--------DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEG 58
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
+ E +L + HP + L +E+ L+M+ GG+L R + G Y
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERD 117
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVL---VREDGHIMLSDFDLS 428
A+R + +VL A++YLH LGI++RDLKPEN+L + ED IM+SDF LS
Sbjct: 118 ASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
+ +P S S + GT Y+APE++ + + AVD W+ G+ Y LL G PF N A
Sbjct: 168 MEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAK 225
Query: 567 LFNVVGQPLRFPESP---SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
LF + + +SP +S +A+D IR L+ K+P+ R + +HP+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT----CEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
RW+ + +R + + LG G V L+E T+ A+K +
Sbjct: 9 RWKQAEDIR--------DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEG 58
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
+ E +L + HP + L +E+ L+M+ GG+L R + G Y
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERD 117
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVL---VREDGHIMLSDFDLS 428
A+R + +VL A++YLH LGI++RDLKPEN+L + ED IM+SDF LS
Sbjct: 118 ASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
+ +P S S + GT Y+APE++ + + AVD W+ G+ Y LL G PF N A
Sbjct: 168 MEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAK 225
Query: 567 LFNVVGQPLRFPESP---SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
LF + + +SP +S +A+D IR L+ K+P+ R + +HP+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT----CEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
RW+ + +R + + LG G V L+E T+ A+K +
Sbjct: 9 RWKQAEDIR--------DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEG 58
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
+ E +L + HP + L +E+ L+M+ GG+L R + G Y
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERD 117
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVL---VREDGHIMLSDFDLS 428
A+R + +VL A++YLH LGI++RDLKPEN+L + ED IM+SDF LS
Sbjct: 118 ASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT 566
+ +P S S + GT Y+APE++ + + AVD W+ G+ Y LL G PF N A
Sbjct: 168 MEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAK 225
Query: 567 LFNVVGQPLRFPESP---SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
LF + + +SP +S +A+D IR L+ K+P+ R + +HP+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT----CEQALQHPWI 276
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXX-----XQTEREIL 333
+ + + K LG G G V L+ T A+K++ +TE EIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + + F+ + + +V+E GG+L + K E + Y ++LLA
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 394 LEYLHMLGIIYRDLKPENVLV---REDGHIMLSDF 425
++YLH GII+RDLKPENVL+ ED I ++DF
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 505 ELIAEPTSARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA 561
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 165 KILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 562 GNRATLFNVV--GQPLRFPES-PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+ +L + + G+ PE VS A DL++ LLV +P+ R E RHP+
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 278
Query: 619 Q 619
Q
Sbjct: 279 Q 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXX-----XQTEREIL 333
+ + + K LG G G V L+ T A+K++ +TE EIL
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + + F+ + + +V+E GG+L + K E + Y ++LLA
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLA 125
Query: 394 LEYLHMLGIIYRDLKPENVLV---REDGHIMLSDF 425
++YLH GII+RDLKPENVL+ ED I ++DF
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 505 ELIAEPTSARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA 561
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 164 KILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
Query: 562 GNRATLFNVV--GQPLRFPES-PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+ +L + + G+ PE VS A DL++ LLV +P+ R E RHP+
Sbjct: 222 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 277
Query: 619 Q 619
Q
Sbjct: 278 Q 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXX-----XQTEREIL 333
+ + + K LG G G V L+ T A+K++ +TE EIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + + F+ + + +V+E GG+L + K E + Y ++LLA
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 394 LEYLHMLGIIYRDLKPENVLV---REDGHIMLSDF 425
++YLH GII+RDLKPENVL+ ED I ++DF
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 505 ELIAEPTSARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA 561
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 165 KILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 562 GNRATLFNVV--GQPLRFPES-PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+ +L + + G+ PE VS A DL++ LLV +P+ R E RHP+
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 278
Query: 619 Q 619
Q
Sbjct: 279 Q 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXX-----XQTEREIL 333
+ + + K LG G G V L+ T A+K++ +TE EIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + + F+ + + +V+E GG+L + K E + Y ++LLA
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 394 LEYLHMLGIIYRDLKPENVLV---REDGHIMLSDF 425
++YLH GII+RDLKPENVL+ ED I ++DF
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 505 ELIAEPTSARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA 561
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 165 KILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 562 GNRATLFNVV--GQPLRFPES-PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+ +L + + G+ PE VS A DL++ LLV +P+ R E RHP+
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 278
Query: 619 Q 619
Q
Sbjct: 279 Q 279
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ F++ LG G VY + GT+ +A+KV+ +TE +L L H
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVL-----KKTVDKKIVRTEIGVLLRLSH 107
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L FET LV+E GG+L R + G Y+SE A V ++L A+ YLH
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFD-RIVEKG-YYSERDAADAVKQILEAVAYLH 165
Query: 399 MLGIIYRDLKPENVLVRE---DGHIMLSDFDLS 428
GI++RDLKPEN+L D + ++DF LS
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT Y APEI++G +G VD W+ GI Y LL G PF +F + +
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271
Query: 580 SP---SVSFAARDLIRGLLVKEPQHRL 603
SP VS A+DL+R L+V +P+ RL
Sbjct: 272 SPWWDEVSLNAKDLVRKLIVLDPKKRL 298
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXX-----XQTEREIL 333
+ + + K LG G G V L+ T A+K++ +TE EIL
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + + F+ + + +V+E GG+L + K E + Y ++LLA
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLA 132
Query: 394 LEYLHMLGIIYRDLKPENVLV---REDGHIMLSDF 425
++YLH GII+RDLKPENVL+ ED I ++DF
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 505 ELIAEPTSARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA 561
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 171 KILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
Query: 562 GNRATLFNVV--GQPLRFPES-PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+ +L + + G+ PE VS A DL++ LLV +P+ R E RHP+
Sbjct: 229 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 284
Query: 619 Q 619
Q
Sbjct: 285 Q 285
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 272 HMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE 331
H ++ + +K + LG G G V L + T A+KV+ E +
Sbjct: 19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 332 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+L+ LDHP + LY FE + LV E GG+L + K FSE A + +VL
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVL 136
Query: 392 LALEYLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESK 448
+ Y H I++RDLKPEN+L+ +D +I + DF LS T ++S +
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKDKI 189
Query: 449 NLSYCVQPACIEPT 462
+Y + P + T
Sbjct: 190 GTAYYIAPEVLHGT 203
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
S + +GT Y+APE++ G + D W+ G+ LY LL G PF GA L V
Sbjct: 182 SKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 240
Query: 572 GQPLRF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCA 629
F P+ VS +A+DLIR L P R++ R + H + Q+ I
Sbjct: 241 KGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISAR----DALDHEWIQTYTKEQISV- 295
Query: 630 SPPDVPKQKPAVMDL 644
DVP A++++
Sbjct: 296 ---DVPSLDNAILNI 307
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 272 HMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE 331
H ++ + +K + LG G G V L + T A+KV+ E +
Sbjct: 43 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 332 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+L+ LDHP + LY FE + LV E GG+L + K FSE A + +VL
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVL 160
Query: 392 LALEYLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESK 448
+ Y+H I++RDLKPEN+L+ +D +I + DF LS T ++S +
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKI 213
Query: 449 NLSYCVQPACIEPT 462
+Y + P + T
Sbjct: 214 GTAYYIAPEVLHGT 227
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE++ G + D W+ G+ LY LL G PF GA L V F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPPDVPK 636
P+ VS +A+DLIR +L P R++ R + H + Q+ I DVP
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISAR----DALDHEWIQTYTKEQISV----DVPS 323
Query: 637 QKPAVMDL 644
A++++
Sbjct: 324 LDNAILNI 331
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 272 HMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE 331
H ++ + +K + LG G G V L + T A+KV+ E +
Sbjct: 42 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 332 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+L+ LDHP + LY FE + LV E GG+L + K FSE A + +VL
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVL 159
Query: 392 LALEYLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESK 448
+ Y+H I++RDLKPEN+L+ +D +I + DF LS T ++S +
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKI 212
Query: 449 NLSYCVQPACIEPT 462
+Y + P + T
Sbjct: 213 GTAYYIAPEVLHGT 226
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE++ G + D W+ G+ LY LL G PF GA L V F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPPDVPK 636
P+ VS +A+DLIR +L P R++ R + H + Q+ I DVP
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISAR----DALDHEWIQTYTKEQISV----DVPS 322
Query: 637 QKPAVMDL 644
A++++
Sbjct: 323 LDNAILNI 330
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 272 HMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE 331
H ++ + +K + LG G G V L + T A+KV+ E +
Sbjct: 25 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 332 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+L+ LDHP + LY FE + LV E GG+L + K FSE A + +VL
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVL 142
Query: 392 LALEYLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESK 448
+ Y+H I++RDLKPEN+L+ +D +I + DF LS T ++S +
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKI 195
Query: 449 NLSYCVQPACIEPT 462
+Y + P + T
Sbjct: 196 GTAYYIAPEVLHGT 209
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE++ G + D W+ G+ LY LL G PF GA L V F
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYR 606
P+ VS +A+DLIR +L P R++ R
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 283
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 272 HMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE 331
H ++ + +K + LG G G V L + T A+KV+ E +
Sbjct: 19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 332 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVL 391
+L+ LDHP + LY FE + LV E GG+L + K FSE A + +VL
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVL 136
Query: 392 LALEYLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLS 428
+ Y+H I++RDLKPEN+L+ +D +I + DF LS
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE++ G + D W+ G+ LY LL G PF GA L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPPDVPK 636
P+ VS +A+DLIR +L P R++ R + H + Q+ I DVP
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISAR----DALDHEWIQTYTKEQISV----DVPS 299
Query: 637 QKPAVMDL 644
A++++
Sbjct: 300 LDNAILNI 307
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++LLK +G G+ V L+ + T A+K++D + R I++ L+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR-IMKVLN 71
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K LVME+ GG++ G+ E AR +++ A++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQYC 129
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHR 602
R P S +L++ L+ P R
Sbjct: 231 RIPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++LLK +G G+ V L+ + T A+K++D + R I++ L+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR-IMKVLN 71
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K LVME+ GG++ G+ E AR +++ A++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQYC 129
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHR 602
R P S +L++ L+ P R
Sbjct: 231 RIPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++LLK +G G+ V L+ + T A+K++D + R I++ L+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR-IMKVLN 71
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K LVME+ GG++ G+ E AR +++ A++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQYC 129
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHR 602
R P S +L++ L+ P R
Sbjct: 231 RIPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G Y M TK FA KV+ TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE D F +V+E C L L +R+ K +E AR+++ + + ++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ + + T +
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P ++ A LIR +L +P R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G Y M TK FA KV+ TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE D F +V+E C L L +R+ K +E AR+++ + + ++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R + GT Y+APE++ +GH VD W+ G LY LL GK PF+ + + T +
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P ++ A LIR +L +P R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G Y M TK FA KV+ TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE D F +V+E C L L +R+ K +E AR+++ + + ++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ + + T +
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P ++ A LIR +L +P R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXX-----XQTEREIL 333
+ + + K LG G G V L+ T A++++ +TE EIL
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + + F+ + + +V+E GG+L + K E + Y ++LLA
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLA 265
Query: 394 LEYLHMLGIIYRDLKPENVLV---REDGHIMLSDF 425
++YLH GII+RDLKPENVL+ ED I ++DF
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 505 ELIAEPTSARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA 561
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 304 KILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
Query: 562 GNRATLFNVV--GQPLRFPES-PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+ +L + + G+ PE VS A DL++ LLV +P+ R E RHP+
Sbjct: 362 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 417
Query: 619 QS 620
Q
Sbjct: 418 QD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXX-----XQTEREIL 333
+ + + K LG G G V L+ T A++++ +TE EIL
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + + F+ + + +V+E GG+L + K E + Y ++LLA
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLA 251
Query: 394 LEYLHMLGIIYRDLKPENVLV---REDGHIMLSDF 425
++YLH GII+RDLKPENVL+ ED I ++DF
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 505 ELIAEPTSARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA 561
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 290 KILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
Query: 562 GNRATLFNVV--GQPLRFPES-PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+ +L + + G+ PE VS A DL++ LLV +P+ R E RHP+
Sbjct: 348 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 403
Query: 619 QS 620
Q
Sbjct: 404 QD 405
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
++ L +G G G V ++ GT+ A K + + E EI++SLDH
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI---PKYFVEDVDRFKQEIEIMKSLDH 65
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + LY FE + LVME C GG+L + + F E A + +VL A+ Y H
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 399 MLGIIYRDLKPENVLV---REDGHIMLSDFDLSLR 430
L + +RDLKPEN L D + L DF L+ R
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
VGT Y++P++++G +G D W+ G+ +Y LL G PF + + + FP
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 579 ESP--SVSFAARDLIRGLLVKEPQHRLA 604
E +VS A LIR LL K P+ R+
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRIT 255
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
++ L +G G G V ++ GT+ A K + + E EI++SLDH
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI---PKYFVEDVDRFKQEIEIMKSLDH 82
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + LY FE + LVME C GG+L + + F E A + +VL A+ Y H
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 399 MLGIIYRDLKPENVLV---REDGHIMLSDFDLSLR 430
L + +RDLKPEN L D + L DF L+ R
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
VGT Y++P++++G +G D W+ G+ +Y LL G PF + + + FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 579 ESP--SVSFAARDLIRGLLVKEPQHRLA 604
E +VS A LIR LL K P+ R+
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRIT 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXX--------------- 322
LN + L +G G G V L+ T++AMKV+
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 323 --------XXXXQTEREILQSLDHPFLPTLYTHFE--TDKFSCLVMEFCPGGDLHALRQR 372
E IL+ LDHP + L + + +V E G + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 373 QPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+P SE ARFY +++ +EYLH II+RD+KP N+LV EDGHI ++DF +S
Sbjct: 132 KP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 519 VGTHEYLAPEII---KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
VGT ++APE + + G A+D W G+ LY +FG+ PF + Q L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
FP+ P ++ +DLI +L K P+ R+ E+K HP+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIKLHPW 295
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++++ LG G G VY ++ T A KV+D E +IL S DH
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY---MVEIDILASCDH 93
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHA--LRQRQPGKYFSEHAARFYVAEVLLALEY 396
P + L F + +++EFC GG + A L +P +E + + L AL Y
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNY 150
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQP 456
LH II+RDLK N+L DG I L+DF +S + NT + S+ P
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-----------AKNTRXIQRRDSFIGTP 199
Query: 457 ACIEPTCVI 465
+ P V+
Sbjct: 200 YWMAPEVVM 208
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 514 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLF 568
R SF+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 569 NVV-GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
+ +P + S +D ++ L K + R +++ +HPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCLEK----NVDARWTTSQLLQHPF 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++++ LG G G VY ++ T A KV+D E +IL S DH
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY---MVEIDILASCDH 93
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHA--LRQRQPGKYFSEHAARFYVAEVLLALEY 396
P + L F + +++EFC GG + A L +P +E + + L AL Y
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNY 150
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
LH II+RDLK N+L DG I L+DF +S +
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 511 TSARSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
T R SF+GT ++APE++ K + D W+ GI L E+ + P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 566 TLFNVV-GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
L + +P + S +D ++ L K + R +++ +HPF
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEK----NVDARWTTSQLLQHPF 296
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 269 VRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQT 328
VR G +G ++FK+ ++LG G G V L + + A+KV+ +
Sbjct: 27 VRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKN 85
Query: 329 ----------EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYF 378
E +L+SLDHP + L+ FE K+ LV EF GG+L Q F
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKF 143
Query: 379 SEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG---HIMLSDFDLS 428
E A + ++L + YLH I++RD+KPEN+L+ +I + DF LS
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP--LR 576
+GT Y+APE++K + + D W+ G+ +Y LL G PF G ++ + V
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHR 602
F + ++S A++LI+ +L + R
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++++ LG G G VY ++ T A KV+D E +IL S DH
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY---MVEIDILASCDH 93
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHA--LRQRQPGKYFSEHAARFYVAEVLLALEY 396
P + L F + +++EFC GG + A L +P +E + + L AL Y
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNY 150
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
LH II+RDLK N+L DG I L+DF +S +
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 514 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLF 568
R F+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 569 NVV-GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
+ +P + S +D ++ L K + R +++ +HPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCLEK----NVDARWTTSQLLQHPF 296
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++LLK +G G+ V L+ + T A+K++D + R I++ L+
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVR-IMKILN 69
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K L+ME+ GG++ G+ E AR +++ A++Y
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-GR-MKEKEARSKFRQIVSAVQYC 127
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHR 602
R P S +L++ LV P R
Sbjct: 229 RIPFYMSTD--CENLLKRFLVLNPIKR 253
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++LLK +G G+ V L+ + T A+K++D + R I++ L+
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVR-IMKILN 72
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K L+ME+ GG++ G+ E AR +++ A++Y
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-GR-MKEKEARSKFRQIVSAVQYC 130
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 131 HQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHR 602
R P S +L++ LV P R
Sbjct: 232 RIPFYMSTD--CENLLKRFLVLNPIKR 256
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G Y M TK FA KV+ TE I +SLD+P + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE D F +V+E C L L +R+ K +E AR+++ + + ++YLH +I+RD
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + +D + + DF L+ +
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLATK 175
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ + + T +
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P ++ A LIR +L +P R
Sbjct: 242 EYSVPR--HINPVASALIRRMLHADPTLR 268
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++LLK +G G+ V L+ + T A++++D + R I++ L+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVR-IMKVLN 71
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K LVME+ GG++ G+ E AR +++ A++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQYC 129
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHR 602
R P S +L++ L+ P R
Sbjct: 231 RIPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++LLK +G G+ V L+ + T A++++D + R I++ L+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVR-IMKVLN 71
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K LVME+ GG++ G+ E AR +++ A++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQYC 129
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 518 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+ R
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHR 602
P S +L++ L+ P R
Sbjct: 232 IPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++++K LG G G V L+ T A+K+++ + E L+ L
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + LY ++ +V+E+ + QR SE AR + +++ A+EY
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYC 128
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLKPEN+L+ E ++ ++DF LS
Sbjct: 129 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 520 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
G+ Y APE+I G+ + G VD W+ G+ LY +L + PF N+ P
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 579 ESPSVSFAARDLIRGLLVKEPQHRLA 604
+ +S A LI+ +L+ P +R++
Sbjct: 233 K--FLSPGAAGLIKRMLIVNPLNRIS 256
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++++K LG G G V L+ T A+K+++ + E L+ L
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + LY ++ +V+E+ + QR SE AR + +++ A+EY
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYC 129
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLKPEN+L+ E ++ ++DF LS
Sbjct: 130 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 520 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
G+ Y APE+I G+ + G VD W+ G+ LY +L + PF N+ P
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 579 ESPSVSFAARDLIRGLLVKEPQHRLA 604
+ +S A LI+ +L+ P +R++
Sbjct: 234 K--FLSPGAAGLIKRMLIVNPLNRIS 257
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++++K LG G G V L+ T A+K+++ + E L+ L
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + LY ++ +V+E+ + QR SE AR + +++ A+EY
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYC 119
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLKPEN+L+ E ++ ++DF LS
Sbjct: 120 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 520 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
G+ Y APE+I G+ + G VD W+ G+ LY +L + PF N+ P
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 579 ESPSVSFAARDLIRGLLVKEPQHRLA 604
+ +S A LI+ +L+ P +R++
Sbjct: 224 K--FLSPGAAGLIKRMLIVNPLNRIS 247
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F ++ LG G V+L + T FA+K + + E +L+ + H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSL---ENEIAVLKKIKHEN 67
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ TL +E+ LVM+ GG+L R + G Y +E A + +VL A++YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFD-RILERGVY-TEKDASLVIQQVLSAVKYLHEN 125
Query: 401 GIIYRDLKPENVLV---REDGHIMLSDFDLS 428
GI++RDLKPEN+L E+ IM++DF LS
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT Y+APE++ + + AVD W+ G+ Y LL G PF + LF + + E
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY-EETESKLFEKIKEGYYEFE 227
Query: 580 SP---SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASP 631
SP +S +A+D I LL K+P R + + HP+ N AL R P
Sbjct: 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 266 IQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXX 325
I + + H+ + ++ +K+LG G G V L T A+K++
Sbjct: 28 ITSKKGHLSEM----YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKL 83
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL-----HALRQRQPGKYFSE 380
+ E +L+ LDHP + LY FE + LVME GG+L H ++ F+E
Sbjct: 84 LE-EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-------FNE 135
Query: 381 HAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV---REDGHIMLSDFDLS 428
A + +VL + YLH I++RDLKPEN+L+ +D I + DF LS
Sbjct: 136 VDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE+++ + + D W+ G+ L+ LL G PF G ++ L V F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
PE +VS A+DLI+ +L + Q R++ A + HP+ + +
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRIS----AQQALEHPWIKEM 298
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
++++ LG G G VY ++ T A KV++ E EIL + DHP+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI---VEIEILATCDHPY 77
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L + D +++EFCPGG + A+ + + +E + ++L AL +LH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
II+RDLK NVL+ +G I L+DF +S +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Query: 511 TSARSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
T + SF+GT ++APE++ K + D W+ GI L E+ + P
Sbjct: 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 229
Query: 566 TLFNVVGQP---LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN 622
L + L P SV F RD ++ L K P+ R A ++ HPF S+
Sbjct: 230 VLLKIAKSDPPTLLTPSKWSVEF--RDFLKIALDKNPE----TRPSAAQLLEHPFVSSIT 283
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++++K LG G G V L+ T A+K+++ + E L+ L
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + LY ++ +V+E+ + QR SE AR + +++ A+EY
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYC 123
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLKPEN+L+ E ++ ++DF LS
Sbjct: 124 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 520 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
G+ Y APE+I G+ + G VD W+ G+ LY +L + PF N+ P
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 579 ESPSVSFAARDLIRGLLVKEPQHRLA 604
+ +S A LI+ +L+ P +R++
Sbjct: 228 K--FLSPGAAGLIKRMLIVNPLNRIS 251
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
++++ LG G G VY ++ T A KV++ E EIL + DHP+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI---VEIEILATCDHPY 69
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L + D +++EFCPGG + A+ + + +E + ++L AL +LH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
II+RDLK NVL+ +G I L+DF +S +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Query: 511 TSARSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
T + SF+GT ++APE++ K + D W+ GI L E+ + P
Sbjct: 162 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 221
Query: 566 TLFNVVGQP---LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN 622
L + L P SV F RD ++ L K P+ R A ++ HPF S+
Sbjct: 222 VLLKIAKSDPPTLLTPSKWSVEF--RDFLKIALDKNPE----TRPSAAQLLEHPFVSSIT 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN--WALIRCAS 630
S A+D IR LLVKE + RL + E RHP+ V+ A++R S
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDTQQAMVRRES 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 327 QTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
+ ERE IL+ + HP + TL+ +E L++E GG+L ++ SE A
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
++ ++L + YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 290 GDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFE 349
GD G VY ++ T A KV+D E +IL S DHP + L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY---MVEIDILASCDHPNIVKLLDAFY 77
Query: 350 TDKFSCLVMEFCPGGDLHA--LRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDL 407
+ +++EFC GG + A L +P +E + + L AL YLH II+RDL
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 408 KPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTCVI 465
K N+L DG I L+DF +S K++ T ++ ++ S+ P + P V+
Sbjct: 135 KAGNILFTLDGDIKLADFGVS---------AKNTRTXIQRRD-SFIGTPYWMAPEVVM 182
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 514 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLF 568
R SF+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
Query: 569 NVV-GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
+ +P + S +D ++ L K + R +++ +HPF
Sbjct: 225 KIAKSEPPTLAQPSRWSSNFKDFLKKCLEK----NVDARWTTSQLLQHPF 270
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN--WALIRCAS 630
S A+D IR LLVKE + RL + E RHP+ V+ A++R S
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVRRES 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 327 QTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
+ ERE IL+ + H + TL+ +E L++E GG+L ++ SE A
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
++ ++L + YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN--WALIRCAS 630
S A+D IR LLVKE + RL + E RHP+ V+ A++R S
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVRRES 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 327 QTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
+ ERE IL+ + H + TL+ +E L++E GG+L ++ SE A
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
++ ++L + YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L +++L + +G G V L+ + T A+K+MD +TE E L++L
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRI--KTEIEALKNLR 66
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
H + LY ET +V+E+CPGG+L Q SE R +++ A+ Y+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYV 124
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
H G +RDLKPEN+L E + L DF L
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 506 LIAEPTSARSMSF---VGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGA 561
L A+P + G+ Y APE+I+G+ + GS D W+ GI LY L+ G PF
Sbjct: 154 LCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD 213
Query: 562 GNRATLFNVVGQPLRFPE--SPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF- 618
A ++ P+ SPS L++ +L +P+ R++ + + HP+
Sbjct: 214 NVMALYKKIMRGKYDVPKWLSPSSIL----LLQQMLQVDPKKRISMK----NLLNHPWIM 265
Query: 619 QSVNW 623
Q N+
Sbjct: 266 QDYNY 270
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN--WALIRCAS 630
S A+D IR LLVKE + RL + E RHP+ V+ A++R S
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVRRES 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 327 QTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
+ ERE IL+ + H + TL+ +E L++E GG+L ++ SE A
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
++ ++L + YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++LLK +G G+ V L+ + T A+K++D + R I + L+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR-IXKVLN 71
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K LV E+ GG++ E A+F +++ A++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF--RQIVSAVQYC 129
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 130 HQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHR 602
R P S +L++ L+ P R
Sbjct: 231 RIPFYXSTD--CENLLKKFLILNPSKR 255
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 284 LKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPT 343
L+++G G G L + + +K ++ + E +L ++ HP +
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQ 87
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
FE + +VM++C GGDL Q G F E + ++ LAL+++H I+
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RD+K +N+ + +DG + L DF ++
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIA 172
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
+GT YL+PEI + + + + D W G LYEL K F+ + + ++ P
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-P 244
Query: 579 ESPSVSFAARDLIRGLLVKEPQHR 602
S S+ R L+ L + P+ R
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN--WALIRCAS 630
S A+D IR LLVKE + RL + E RHP+ V+ A++R S
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVRRES 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 327 QTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
+ ERE IL+ + H + TL+ +E L++E GG+L ++ SE A
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
++ ++L + YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +++L K +G G+ V L+ + T A+K++D + R I++ L+
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVR-IMKILN 72
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ ET+K LVME+ GG++ G+ E AR +++ A++Y
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQYC 130
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H I++RDLK EN+L+ D +I ++DF S
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 576 RFP 578
R P
Sbjct: 232 RIP 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN--WALIR 627
S A+D IR LLVKE + RL + E RHP+ V+ A++R
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 327 QTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQPGKYFSEHAA 383
+ ERE IL+ + H + TL+ +E L++E GG+L L Q++ SE A
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEA 117
Query: 384 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
++ ++L + YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF--QSVNWALIRCASPPDVP 635
+ S A+D IR LLVK+P+ R+ + +HP+ + AL R AS ++
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKASAVNME 294
Query: 636 KQK 638
K K
Sbjct: 295 KFK 297
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
+++ +A+R MG L +F++ K++G G VY + + A+K +
Sbjct: 15 QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK 74
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ--RQPGKYFS 379
E ++L+ L+HP + Y F D +V+E GDL + + ++ +
Sbjct: 75 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 380 EHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
E Y ++ ALE++H +++RD+KP NV + G + L D L
Sbjct: 135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 182
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG--QP 574
S VGT Y++PE I G+ D W+ G LYE+ ++PF G++ L+++ +
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF--YGDKMNLYSLCKKIEQ 252
Query: 575 LRFPESPSVSFAA--RDLIRGLLVKEPQHR 602
+P PS ++ R L+ + +P+ R
Sbjct: 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 84/202 (41%), Gaps = 31/202 (15%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD--- 337
F+L++ +G G G VY + T A+KVMD E EI Q ++
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----------DEEEEIKQEINMLK 75
Query: 338 ----HPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
H + T Y F D LVMEFC G + L + G E +
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
E+L L +LH +I+RD+K +NVL+ E+ + L DF +S A V NT + +
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS---AQLDRTVGRRNTFIGT 192
Query: 448 KNLSYCVQPACIEPTCVIQPDC 469
Y + P I C PD
Sbjct: 193 ---PYWMAPEVI--ACDENPDA 209
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKGAGNRA 565
T R +F+GT ++APE+I + + A D W+ GI E+ G P
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241
Query: 566 TLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS 620
LF + P +S S + I LVK R A ++ +HPF +
Sbjct: 242 ALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA----TEQLMKHPFIRD 292
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G G V + T+ +A+KV++ + E E+L+ LDHP + L+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFE 88
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
E +V E GG+L + K FSEH A + +V + Y+H I++RD
Sbjct: 89 ILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 407 LKPENVLV---REDGHIMLSDFDLS 428
LKPEN+L+ +D I + DF LS
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS 171
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE+++G + D W+ G+ LY LL G PF G L V F
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P+ ++S A+DLIR +L P R+ AT+ HP+ Q
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 271 SHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTER 330
H G + + H+ L LG G G V + E T A+K+++ + E
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62
Query: 331 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEV 390
+ L+ HP + LY T +VME+ GG+L + G+ E AR ++
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GR-VEEMEARRLFQQI 120
Query: 391 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L A++Y H +++RDLKPENVL+ + ++DF LS
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 520 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV-GQPLRF 577
G+ Y APE+I G + G VD W+ G+ LY LL G PF + TLF + G
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIRGGVFYI 230
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
PE + S A L+ +L +P R + +++ H +F+
Sbjct: 231 PEYLNRSVAT--LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G G V + T+ +A+KV++ + E E+L+ LDHP + L+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFE 88
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
E +V E GG+L + K FSEH A + +V + Y+H I++RD
Sbjct: 89 ILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 407 LKPENVLV---REDGHIMLSDFDLS 428
LKPEN+L+ +D I + DF LS
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS 171
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE+++G + D W+ G+ LY LL G PF G L V F
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P+ ++S A+DLIR +L P R+ AT+ HP+ Q
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G G V + T+ +A+KV++ + E E+L+ LDHP + L+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFE 88
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
E +V E GG+L + K FSEH A + +V + Y+H I++RD
Sbjct: 89 ILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 407 LKPENVLV---REDGHIMLSDFDLS 428
LKPEN+L+ +D I + DF LS
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS 171
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
+GT Y+APE+++G + D W+ G+ LY LL G PF G L V F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPPDVPK 636
P+ ++S A+DLIR +L P R+ AT+ HP+ Q +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKYS-------------S 285
Query: 637 QKPAVMDLP 645
+ P + DLP
Sbjct: 286 ETPTISDLP 294
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEIXINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEIXINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 271 SHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTER 330
H G + + H+ L LG G G V + E T A+K+++ + E
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62
Query: 331 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEV 390
+ L+ HP + LY T +VME+ GG+L + G+ E AR ++
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GR-VEEMEARRLFQQI 120
Query: 391 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L A++Y H +++RDLKPENVL+ + ++DF LS
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 520 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV-GQPLRF 577
G+ Y APE+I G + G VD W+ G+ LY LL G PF + TLF + G
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIRGGVFYI 230
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS 620
PE + S A L+ +L +P R + +++ H +F+
Sbjct: 231 PEYLNRSVAT--LLMHMLQVDPLKRATIK----DIREHEWFKQ 267
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEIXINKMLNHEN 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF--QSVNWALIRCAS 630
+ S A+D IR LLVK+P+ R+ + +HP+ + AL R AS
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKAS 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF--QSVNWALIRCAS 630
+ S A+D IR LLVK+P+ R+ + +HP+ + AL R AS
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKAS 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G + TK FA K++ E I +SL H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE + F +V+E C L L +R+ K +E AR+Y+ +++L +YLH +I+RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + ED + + DF L+ +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATK 170
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ + + T +
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P+ ++ A LI+ +L +P R
Sbjct: 237 EYSIPK--HINPVAASLIQKMLQTDPTAR 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G + TK FA K++ E I +SL H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE + F +V+E C L L +R+ K +E AR+Y+ +++L +YLH +I+RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + ED + + DF L+ +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATK 190
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ + + T +
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P+ ++ A LI+ +L +P R
Sbjct: 257 EYSIPK--HINPVAASLIQKMLQTDPTAR 283
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G + TK FA K++ E I +SL H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE + F +V+E C L L +R+ K +E AR+Y+ +++L +YLH +I+RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ + + T +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P+ ++ A LI+ +L +P R
Sbjct: 233 EYSIPK--HINPVAASLIQKMLQTDPTAR 259
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F ++LG G G V+L E + +K ++ + E E+L+SLDHP
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQI--EAEIEVLKSLDHPN 81
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
+ ++ FE +VME C GG+L + + GK SE + +++ AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 399 MLGIIYRDLKPENVLVRED---GHIMLSDFDLS 428
++++DLKPEN+L ++ I + DF L+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 515 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
S + GT Y+APE+ K + D W+ G+ +Y LL G PF G T V Q
Sbjct: 183 STNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTG-----TSLEEVQQK 236
Query: 575 LRFPESPSVSFAAR-------DLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ E P+ + R DL++ +L K+P+ R + A +V H +F+
Sbjct: 237 ATYKE-PNYAVECRPLTPQAVDLLKQMLTKDPERRPS----AAQVLHHEWFK 283
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 577 FPES--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF--QSVNWALIRCAS 630
F + + S A+D IR LLVK+P+ R+ + +HP+ + AL R AS
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKAS 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G + TK FA K++ E I +SL H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE + F +V+E C L L +R+ K +E AR+Y+ +++L +YLH +I+RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + ED + + DF L+ +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATK 188
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ + + T +
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P+ ++ A LI+ +L +P R
Sbjct: 255 EYSIPK--HINPVAASLIQKMLQTDPTAR 281
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G + TK FA K++ E I +SL H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE + F +V+E C L L +R+ K +E AR+Y+ +++L +YLH +I+RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ + + T +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHR 602
P+ ++ A LI+ +L +P R
Sbjct: 233 EYSIPK--HINPVAASLIQKMLQTDPTAR 259
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 64
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
+GT EYLAPEI+ + +A D W GI Y LL +PF G N+ T N+ + +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 578 PES--PSVSFAARDLIRGLLVKEPQHR 602
E SVS A D I+ LLVK P+ R
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L+ +E L++E+ GG++ +L + + SE+ + ++L + YLH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 399 MLGIIYRDLKPENVLVRED---GHIMLSDFDLS 428
I++ DLKP+N+L+ G I + DF +S
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G + TK FA K++ E I +SL H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE + F +V+E C L L +R+ K +E AR+Y+ +++L +YLH +I+RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 407 LKPENVLVREDGHIMLSDFDLSLR 430
LK N+ + ED + + DF L+ +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATK 164
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 508 AEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL 567
E R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ + + T
Sbjct: 165 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 224
Query: 568 FNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHR 602
+ P+ ++ A LI+ +L +P R
Sbjct: 225 LRIKKNEYSIPK--HINPVAASLIQKMLQTDPTAR 257
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINKMLNHEN 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQ-TERE--ILQS 335
+++ + LG G V T +A K + + ERE IL+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+ HP + TL+ +E L++E GG+L + +E A ++ ++L +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVY 127
Query: 396 YLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQ-TERE--ILQS 335
+++ + LG G V T +A K + + ERE IL+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+ HP + TL+ +E L++E GG+L + +E A ++ ++L +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVY 127
Query: 396 YLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ S A+D IR LLVK+P+ R+ + +HP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQ-TERE--ILQS 335
+++ + LG G V T +A K + + ERE IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+ HP + TL+ +E L+ E GG+L + +E A ++ ++L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVY 128
Query: 396 YLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRL 603
+ S A+D IR LLVK+P+ R+
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRM 265
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMK-VMDXXXXXXXXXXXXXQTERE--ILQS 335
+H+++ + LG G V GT +A K + + ERE IL+
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+ HP + TL+ FE L++E GG+L + +E A ++ ++L +
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVH 129
Query: 396 YLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
YLH I + DLKPEN+++ + I L DF ++
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRL 603
+ S A+D IR LLVK+P+ R+
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRM 258
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMK-VMDXXXXXXXXXXXXXQTERE--ILQS 335
+H+++ + LG G V GT +A K + + ERE IL+
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+ HP + TL+ FE L++E GG+L + +E A ++ ++L +
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVH 122
Query: 396 YLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
YLH I + DLKPEN+++ + I L DF ++
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ L++ LG G G V L+ T+ A+K++D + E I L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI--KKEICINAMLNHEN 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y H L +E+C GG+L + +P E A+ + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRL 603
+ S A+D IR LLVK+P+ R+
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRM 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMK-VMDXXXXXXXXXXXXXQTERE--ILQS 335
+H+++ + LG G V GT +A K + + ERE IL+
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+ HP + TL+ FE L++E GG+L + +E A ++ ++L +
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVH 143
Query: 396 YLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
YLH I + DLKPEN+++ + I L DF ++
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 270 RSHMGSLGLNHFKLLKRLGCGDIGSVYLS--ELMGTKTHFAMKVMDXXXXXXXXXXXXXQ 327
+ H G + + H+ L LG G G V + EL G K A+K+++ +
Sbjct: 7 QKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKV--AVKILNRQKIRSLDVVGKIR 64
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E + L+ HP + LY T +VME+ GG+L + G+ E +R
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN-GR-LDEKESRRLF 122
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L ++Y H +++RDLKPENVL+ + ++DF LS
Sbjct: 123 QQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 520 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF- 577
G+ Y APE+I G + G VD W+ G+ LY LL G PF + TLF + + +
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYT 235
Query: 578 PE--SPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P+ +PSV L++ +L +P R + +++ H +F+
Sbjct: 236 PQYLNPSVI----SLLKHMLQVDPMKRATIK----DIREHEWFK 271
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G G V L+ T+ A+K + + E L+ L HP + LY
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
T +V+E+ G + ++ K +E R + +++ A+EY H I++RD
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 407 LKPENVLVREDGHIMLSDFDLS 428
LKPEN+L+ ++ ++ ++DF LS
Sbjct: 134 LKPENLLLDDNLNVKIADFGLS 155
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 520 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
G+ Y APE+I G+ + G VD W+ GI LY +L G+ PF LF V + +
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF-IPNLFKKVNSCV-YV 226
Query: 579 ESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+S A+ LIR ++V +P R+ + E++R P+F
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQRITIQ----EIRRDPWF 262
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE--ILQSLDH 338
++L + +G G V T FA+K++D +RE I L H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALEY 396
P + L + +D +V EF G DL +++ G +SE A Y+ ++L AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 397 LHMLGIIYRDLKPENVLV---REDGHIMLSDFDLSLR 430
H II+RD+KPENVL+ + L DF ++++
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ 182
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
VGT ++APE++K E +G VD W G+ L+ LL G PF G R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 579 ESPS-VSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
S +S +A+DL+R +L+ +P R+ E HP+ +
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLK 291
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F L+++G G G V+ T+ A+K++D Q E +L D P+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDSPY 81
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y + D ++ME+ GG AL +PG E + E+L L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGS--ALDLLEPGP-LDETQIATILREILKGLDYLHSE 138
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RD+K NVL+ E G + L+DF ++
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVA 166
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
T + FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 172 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
Query: 571 VGQPLRFPESPSVSFAA--RDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P P + +++ ++ + L KEP ++R A E+ +H F
Sbjct: 232 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT ++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 580 S--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF--QSVNWALIRCAS 630
+ S A+D IR LLVK+P+ R+ + +HP+ + AL R AS
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKAS 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 329 ERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
ERE IL+ + HP + TL+ +E L++E GG+L + +E A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDG----HIMLSDFDLS 428
+ ++L + YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F L+++G G G V+ T+ A+K++D Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDSPY 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y + D ++ME+ GG AL +PG E + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGS--ALDLLEPGP-LDETQIATILREILKGLDYLHSE 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RD+K NVL+ E G + L+DF ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
T + +FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 571 VGQPLRFPESPSVSFAA--RDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P P + +++ ++ + L KEP ++R A E+ +H F
Sbjct: 217 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F L+++G G G V+ T+ A+K++D Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDSPY 66
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y + D ++ME+ GG AL +PG E + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGS--ALDLLEPGP-LDETQIATILREILKGLDYLHSE 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RD+K NVL+ E G + L+DF ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
T + FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 571 VGQPLRFPESPSVSFAA--RDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P P + +++ ++ + L KEP ++R A E+ +H F
Sbjct: 217 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F L+++G G G V+ T+ A+K++D Q E +L D P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDSPY 86
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y + D ++ME+ GG AL +PG E + E+L L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGS--ALDLLEPGP-LDETQIATILREILKGLDYLHSE 143
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RD+K NVL+ E G + L+DF ++
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA 171
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
T + +FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
Query: 571 VGQPLRFPESPSVSFAA--RDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P P + +++ ++ + L KEP ++R A E+ +H F
Sbjct: 237 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 279
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F L R+G G G VY TK A+K++D Q E +L D P+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDSPY 78
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ + + ++ME+ GG AL +PG + A + E+L L+YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGS--ALDLLKPGPLEETYIATI-LREILKGLDYLHSE 135
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RD+K NVL+ E G + L+DF ++
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVA 163
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
T + FVGT ++APE+IK + D W+ GI EL G+ P LF +
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 228
Query: 571 -VGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
P S F ++ + L K+P+ +R A E+ +H F
Sbjct: 229 PKNSPPTLEGQHSKPF--KEFVEACLNKDPR----FRPTAKELLKHKF 270
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 517 SFVGTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
S GT YLAPEII+ G+G VD W+ G+ +Y LL G PF L +
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
Query: 571 VGQPLRF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ +F PE S +DL+ LV +PQ R A E HPFFQ
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQ 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 303 TKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD-------HPFLPTLYTHFETDKFSC 355
T +A+K++D + L+ +D HP + L +ET+ F
Sbjct: 41 TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 100
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
LV + G+L + SE R + +L + LH L I++RDLKPEN+L+
Sbjct: 101 LVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 416 EDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTCV 464
+D +I L+DF S C + P K S C P+ + P +
Sbjct: 159 DDMNIKLTDFGFS--CQLDPG----------EKLRSVCGTPSYLAPEII 195
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F +L++LG G GSVY + T A+K + E I+Q D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII-----KEISIMQQCDSPH 85
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y + + +VME+C G + + R K +E + L LEYLH +
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RD+K N+L+ +GH L+DF ++
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 513 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
A+ +GT ++APE+I+ G+ D W+ GI E+ GK P+ +F +
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
Query: 573 QP---LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS 620
P R PE S +F D ++ LVK P+ R AT++ +HPF +S
Sbjct: 240 NPPPTFRKPELWSDNFT--DFVKQCLVKSPEQRAT----ATQLLQHPFVRS 284
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 520 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
GT YLAPEII+ G+G VD W+ G+ +Y LL G PF L ++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 231
Query: 574 PLRF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+F PE S +DL+ LV +PQ R A E HPFFQ
Sbjct: 232 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQ 275
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 303 TKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD-------HPFLPTLYTHFETDKFSC 355
T +A+K++D + L+ +D HP + L +ET+ F
Sbjct: 28 TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 87
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
LV + G+L + SE R + +L + LH L I++RDLKPEN+L+
Sbjct: 88 LVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 145
Query: 416 EDGHIMLSDFDLSLRCAVCP 435
+D +I L+DF S C + P
Sbjct: 146 DDMNIKLTDFGFS--CQLDP 163
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 520 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
GT YLAPEII+ G+G VD W+ G+ +Y LL G PF L ++
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 574 PLRF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+F PE S +DL+ LV +PQ R A E HPFFQ
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQ 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 303 TKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD-------HPFLPTLYTHFETDKFSC 355
T +A+K++D + L+ +D HP + L +ET+ F
Sbjct: 41 TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 100
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
LV + G+L + SE R + +L + LH L I++RDLKPEN+L+
Sbjct: 101 LVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 416 EDGHIMLSDFDLSLRCAVCP 435
+D +I L+DF S C + P
Sbjct: 159 DDMNIKLTDFGFS--CQLDP 176
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 504 PELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN 563
P+ I + T+A T E+ APEI+ E G D W G+ Y LL G +PF G +
Sbjct: 203 PDEIVKVTTA-------TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD 255
Query: 564 RATLFNVVGQPLRFPESP--SVSFAARDLIRGLLVKEPQHRL 603
TL NV F E SVS A+D I+ LL KEP+ RL
Sbjct: 256 LETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXX 326
Q V GS+ +++ +L+ LG G G V+ T F K ++
Sbjct: 40 QPVEVKQGSV-YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV--- 95
Query: 327 QTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
+ E I+ L HP L L+ FE L++EF GG+L + K SE Y
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINY 154
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVL--VREDGHIMLSDFDLSLR 430
+ + L+++H I++ D+KPEN++ ++ + + DF L+ +
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK 200
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F L+R+G G G V+ T+ A+K++D Q E +L D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDSSY 82
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ Y + ++ME+ GG L + P F E + E+L L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSE 139
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RD+K NVL+ E G + L+DF ++
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA 167
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
T + +FVGT ++APE+I+ + S D W+ GI EL G+ P LF +
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
Query: 571 VGQPLRFPESPSVSFAA--RDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P P + F ++ I L K+P ++R A E+ +H F
Sbjct: 233 ---PKNNPPTLVGDFTKSFKEFIDACLNKDP----SFRPTAKELLKHKFI 275
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G G V+ E T A K++ + E ++ LDH L LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKII---KTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRD 406
FE+ LVME+ GG+L R +E ++ ++ + ++H + I++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 407 LKPENVLV--REDGHIMLSDFDLSLR 430
LKPEN+L R+ I + DF L+ R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARR 238
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG--QPLRF 577
GT E+LAPE++ + D W+ G+ Y LL G +PF G + TL N++ L
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
E +S A++ I LL+KE ++R A+E +HP+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEK----SWRISASEALKHPWL 346
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 77/279 (27%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY + TD++ +VME C DL++ +++ K + Y +L A+ +H GI+
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 404 YRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTC 463
+ DLKP N L+ DG + L DF ++ + +QP + T
Sbjct: 178 HSDLKPANFLIV-DGMLKLIDFGIANQ-----------------------MQP---DTTS 210
Query: 464 VIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMSFVGTHE 523
V++ + + P PE I + +S+R +
Sbjct: 211 VVKDSQVGAVNYMP--------------------------PEAIKDMSSSRENGKSKSKI 244
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP---LRFPES 580
++ W+ G LY + +GKTPF+ N+ + + + P + FP+
Sbjct: 245 SPKSDV------------WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P +D+++ L ++P+ R++ E+ HP+ Q
Sbjct: 293 PEKDL--QDVLKCCLKRDPKQRIS----IPELLAHPYVQ 325
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 77/279 (27%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY + TD++ +VME C DL++ +++ K + Y +L A+ +H GI+
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 404 YRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTC 463
+ DLKP N L+ DG + L DF ++ + +QP + T
Sbjct: 178 HSDLKPANFLIV-DGMLKLIDFGIANQ-----------------------MQP---DTTS 210
Query: 464 VIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMSFVGTHE 523
V++ + + P PE I + +S+R +
Sbjct: 211 VVKDSQVGTVNYMP--------------------------PEAIKDMSSSRENGKSKSKI 244
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP---LRFPES 580
++ W+ G LY + +GKTPF+ N+ + + + P + FP+
Sbjct: 245 SPKSDV------------WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P +D+++ L ++P+ R++ E+ HP+ Q
Sbjct: 293 PEKDL--QDVLKCCLKRDPKQRIS----IPELLAHPYVQ 325
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMK-VMDXXXXXXXXXXXXXQTEREILQSL 336
L+H+ + + LG G G V+ T +FA K VM QT + L
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT----MSVL 211
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP L L+ FE D ++ EF GG+L + K SE A Y+ +V L +
Sbjct: 212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCH 270
Query: 397 LHMLGIIYRDLKPENVL--VREDGHIMLSDFDLS 428
+H ++ DLKPEN++ + + L DF L+
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
GT E+ APE+ +G+ G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 579 ESP--SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVN 622
+S +S +D IR LL+ +P R+ + HP+ N
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWLTPGN 418
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 77/279 (27%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY + TD++ +VME C DL++ +++ K + Y +L A+ +H GI+
Sbjct: 74 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 130
Query: 404 YRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTC 463
+ DLKP N L+ DG + L DF ++ + +QP + T
Sbjct: 131 HSDLKPANFLIV-DGMLKLIDFGIANQ-----------------------MQP---DTTS 163
Query: 464 VIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMSFVGTHE 523
V++ + + P PE I + +S+R +
Sbjct: 164 VVKDSQVGTVNYMP--------------------------PEAIKDMSSSRENGKSKSKI 197
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP---LRFPES 580
++ W+ G LY + +GKTPF+ N+ + + + P + FP+
Sbjct: 198 SPKSDV------------WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 245
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P +D+++ L ++P+ R++ E+ HP+ Q
Sbjct: 246 PEKDL--QDVLKCCLKRDPKQRIS----IPELLAHPYVQ 278
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 77/279 (27%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY + TD++ +VME C DL++ +++ K + Y +L A+ +H GI+
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 404 YRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTC 463
+ DLKP N L+ DG + L DF ++ + +QP + T
Sbjct: 178 HSDLKPANFLIV-DGMLKLIDFGIANQ-----------------------MQP---DTTS 210
Query: 464 VIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMSFVGTHE 523
V++ + + P PE I + +S+R +
Sbjct: 211 VVKDSQVGTVNYMP--------------------------PEAIKDMSSSRENGKSKSKI 244
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP---LRFPES 580
++ W+ G LY + +GKTPF+ N+ + + + P + FP+
Sbjct: 245 SPKSDV------------WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P +D+++ L ++P+ R++ E+ HP+ Q
Sbjct: 293 PEKDL--QDVLKCCLKRDPKQRIS----IPELLAHPYVQ 325
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G V + T +A K+++ + R I + L H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREAR-ICRLLKH 62
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L+ + F LV + GG+L +Y+SE A + ++L ++ + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 399 MLGIIYRDLKPENVLV---REDGHIMLSDFDLSL 429
+ GI++RDLKPEN+L+ + + L+DF L++
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 516 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
Query: 576 RF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
F PE +V+ A+DLI +L P R+ A+E +HP+
Sbjct: 224 DFPSPEWDTVTPEAKDLINKMLTINPAKRIT----ASEALKHPWI 264
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMK-VMDXXXXXXXXXXXXXQTEREILQSL 336
L+H+ + + LG G G V+ T +FA K VM QT + L
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT----MSVL 105
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP L L+ FE D ++ EF GG+L + K SE A Y+ +V L +
Sbjct: 106 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCH 164
Query: 397 LHMLGIIYRDLKPENVL--VREDGHIMLSDFDLS 428
+H ++ DLKPEN++ + + L DF L+
Sbjct: 165 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
GT E+ APE+ +G+ G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 579 ESP--SVSFAARDLIRGLLVKEPQHRLA 604
+S +S +D IR LL+ +P R+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRMT 298
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 77/279 (27%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY + TD++ +VME C DL++ +++ K + Y +L A+ +H GI+
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 404 YRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTC 463
+ DLKP N L+ DG + L DF ++ + +QP + T
Sbjct: 150 HSDLKPANFLIV-DGMLKLIDFGIANQ-----------------------MQP---DTTS 182
Query: 464 VIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMSFVGTHE 523
V++ + + P PE I + +S+R +
Sbjct: 183 VVKDSQVGTVNYMP--------------------------PEAIKDMSSSRENGKSKSKI 216
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP---LRFPES 580
++ W+ G LY + +GKTPF+ N+ + + + P + FP+
Sbjct: 217 SPKSDV------------WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P +D+++ L ++P+ R++ E+ HP+ Q
Sbjct: 265 PEKDL--QDVLKCCLKRDPKQRIS----IPELLAHPYVQ 297
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 77/279 (27%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY + TD++ +VME C DL++ +++ K + Y +L A+ +H GI+
Sbjct: 77 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 133
Query: 404 YRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTC 463
+ DLKP N L+ DG + L DF ++ + +QP + T
Sbjct: 134 HSDLKPANFLIV-DGMLKLIDFGIANQ-----------------------MQP---DTTS 166
Query: 464 VIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMSFVGTHE 523
V++ + + P PE I + +S+R +
Sbjct: 167 VVKDSQVGTVNYMP--------------------------PEAIKDMSSSRENGKSKSKI 200
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP---LRFPES 580
++ W+ G LY + +GKTPF+ N+ + + + P + FP+
Sbjct: 201 SPKSDV------------WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 248
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P +D+++ L ++P+ R++ E+ HP+ Q
Sbjct: 249 PEKDL--QDVLKCCLKRDPKQRIS----IPELLAHPYVQ 281
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 516 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
Query: 576 RF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
F PE +V+ A+DLI +L P R+ A+E +HP+
Sbjct: 224 DFPSPEWDTVTPEAKDLINKMLTINPAKRIT----ASEALKHPWI 264
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G V + T +A K+++ + R I + L H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREAR-ICRLLKH 62
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L+ + F LV + GG+L +Y+SE A + ++L ++ + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 399 MLGIIYRDLKPENVLV---REDGHIMLSDFDLSL 429
+ GI++RDLKPEN+L+ + + L+DF L++
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 271 SHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTER 330
SHM + + + + + +G G T +A+KV+D E
Sbjct: 19 SHMNLVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE-------EI 71
Query: 331 EILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAE 389
EIL HP + TL ++ K LV E GG+L RQ K+FSE A F +
Sbjct: 72 EILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ--KFFSEREASFVLHT 129
Query: 390 VLLALEYLHMLGIIYRDLKPENVL-VREDGH---IMLSDFDLS 428
+ +EYLH G+++RDLKP N+L V E G+ + + DF +
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 521 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA--TLFNVVGQ---PL 575
T ++APE++K +G+ D W+ GI LY +L G TPF + + +G L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
+VS A+DL+ +L +P RL A +V +HP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLT----AKQVLQHPW 285
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 77/279 (27%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY + TD++ +VME C DL++ +++ K + Y +L A+ +H GI+
Sbjct: 73 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 129
Query: 404 YRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPTC 463
+ DLKP N L+ DG + L DF ++ + +QP + T
Sbjct: 130 HSDLKPANFLIV-DGMLKLIDFGIANQ-----------------------MQP---DTTS 162
Query: 464 VIQPDCIQPACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMSFVGTHE 523
V++ + + P PE I + +S+R +
Sbjct: 163 VVKDSQVGTVNYMP--------------------------PEAIKDMSSSRENGKSKSKI 196
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP---LRFPES 580
++ W+ G LY + +GKTPF+ N+ + + + P + FP+
Sbjct: 197 SPKSDV------------WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 244
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
P +D+++ L ++P+ R++ E+ HP+ Q
Sbjct: 245 PEKDL--QDVLKCCLKRDPKQRIS----IPELLAHPYVQ 277
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
VGT ++APE++K E +G VD W G+ L+ LL G PF G R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 579 ESPS-VSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
S +S +A+DL+R +L+ +P R+ E HP+ +
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLK 291
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE--ILQSLDH 338
++L + +G G V T FA+K++D +RE I L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALEY 396
P + L + +D +V EF G DL +++ G +SE A Y+ ++L AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 397 LHMLGIIYRDLKPENVLV 414
H II+RD+KP VL+
Sbjct: 146 CHDNNIIHRDVKPHCVLL 163
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFP 578
VGT ++APE++K E +G VD W G+ L+ LL G PF G R + G+ P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 255
Query: 579 ESPS-VSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
S +S +A+DL+R +L+ +P R+ E HP+ +
Sbjct: 256 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLK 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 303 TKTHFAMKVMDXXXXXXXXXXXXXQTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEF 360
T FA+K++D +RE I L HP + L + +D +V EF
Sbjct: 50 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 109
Query: 361 CPGGDL--HALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
G DL +++ G +SE A Y+ ++L AL Y H II+RD+KP VL+
Sbjct: 110 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 165
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 516 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 241
Query: 576 RF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
F PE +V+ A+DLI +L P R+ A E +HP+
Sbjct: 242 DFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWI 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
++L + LG G V + +A K+++ + R I + L HP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREAR-ICRLLKHPN 82
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ L+ + L+ + GG+L +Y+SE A + ++L A+ + H +
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 401 GIIYRDLKPENVLVR---EDGHIMLSDFDLSL 429
G+++RDLKPEN+L+ + + L+DF L++
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 516 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 230
Query: 576 RF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
F PE +V+ A+DLI +L P R+ A E +HP+
Sbjct: 231 DFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWI 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 327 QTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
+ E I + L HP + L+ + L+ + GG+L +Y+SE A
Sbjct: 58 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHC 115
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLSL 429
+ ++L A+ + H +G+++R+LKPEN+L+ + + L+DF L++
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 302 GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEF 360
T FA+K++D E EIL HP + TL ++ K+ +V E
Sbjct: 45 ATNXEFAVKIIDKSKRDPTE-------EIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97
Query: 361 CPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVL-VREDGH 419
GG+L RQ K+FSE A + + +EYLH G+++RDLKP N+L V E G+
Sbjct: 98 XKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155
Query: 420 ---IMLSDFDLS 428
I + DF +
Sbjct: 156 PESIRICDFGFA 167
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 521 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA--TLFNVVGQPLRFP 578
T ++APE+++ +G+ +A D W+ G+ LY L G TPF + + +G +F
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSG-KFS 241
Query: 579 ESP----SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNW 623
S SVS A+DL+ L +P RL A V RHP+ V+W
Sbjct: 242 LSGGYWNSVSDTAKDLVSKXLHVDPHQRLT----AALVLRHPWI--VHW 284
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 516 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT YL+PE+++ E +G VD W G+ LY LL G PF +
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 223
Query: 576 RF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
F PE +V+ A++LI +L P R+ A E +HP+
Sbjct: 224 DFPSPEWDTVTPEAKNLINQMLTINPAKRIT----AHEALKHPW 263
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + +G G V + T +A K+++ + R I + L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREAR-ICRLLKH 62
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
+ L+ + F LV + GG+L +Y+SE A + ++L A+ + H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 399 MLGIIYRDLKPENVLVR---EDGHIMLSDFDLSL 429
+G+++RDLKPEN+L+ + + L+DF L++
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 302 GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEF 360
T FA+K++D E EIL HP + TL ++ K+ +V E
Sbjct: 45 ATNMEFAVKIIDKSKRDPTE-------EIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97
Query: 361 CPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVL-VREDGH 419
GG+L RQ K+FSE A + + +EYLH G+++RDLKP N+L V E G+
Sbjct: 98 MKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155
Query: 420 ---IMLSDFDLS 428
I + DF +
Sbjct: 156 PESIRICDFGFA 167
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 521 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA--TLFNVVGQPLRFP 578
T ++APE+++ +G+ +A D W+ G+ LY +L G TPF + + +G +F
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG-KFS 241
Query: 579 ESP----SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNW 623
S SVS A+DL+ +L +P RL A V RHP+ V+W
Sbjct: 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AALVLRHPWI--VHW 284
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPESP- 581
EY APE+ + + +A D W+ G +Y LL G PF N+ + N++ F E
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 582 -SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+S A D + LLVKE + R+ A+E +HP+ +
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLK 262
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Query: 287 LGCGDIGSVYL-SELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
LG G+ G V+ E KT+ A V + E IL H + L+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFV-----KVKGTDQVLVKKEISILNIARHRNILHLH 67
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
FE+ + ++ EF G D+ R +E YV +V AL++LH I +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFE-RINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHF 126
Query: 406 DLKPENVL 413
D++PEN++
Sbjct: 127 DIRPENII 134
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+++ + + LG G V T FA K+++ + R I + L H
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQH 87
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L+ + + F LV + GG+L +++SE A + ++L ++ Y H
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 399 MLGIIYRDLKPENVLVREDGH---IMLSDFDLSL 429
GI++R+LKPEN+L+ + L+DF L++
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT YL+PE++K + + VD W G+ LY LL G PF + +
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 578 --PESPSVSFAARDLIRGLLVKEPQHRL 603
PE +V+ A+ LI +L P+ R+
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 302 GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEF 360
T +A+KV+D E EIL HP + TL ++ K LV E
Sbjct: 50 ATNMEYAVKVIDKSKRDPSE-------EIEILLRYGQHPNIITLKDVYDDGKHVYLVTEL 102
Query: 361 CPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVL-VREDGH 419
GG+L RQ K+FSE A F + + +EYLH G+++RDLKP N+L V E G+
Sbjct: 103 MRGGELLDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
Query: 420 ---IMLSDFDLS 428
+ + DF +
Sbjct: 161 PECLRICDFGFA 172
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 521 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA--TLFNVVGQ---PL 575
T ++APE++K +G+ D W+ GI LY +L G TPF + + +G L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
+VS A+DL+ +L +P RL A +V +HP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLT----AKQVLQHPW 285
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 302 GTKTHFAMKVMDXXXXX---XXXXXXXXQTERE---ILQSLDHPFLPTLYTHFETDKFSC 355
T FA+K+M+ T RE + Q HP + TL +E+ F
Sbjct: 117 ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMF 176
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
LV + G+L + SE R + +L A+ +LH I++RDLKPEN+L+
Sbjct: 177 LVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234
Query: 416 EDGHIMLSDFDLSLRCAVCP 435
++ I LSDF S C + P
Sbjct: 235 DNMQIRLSDFGFS--CHLEP 252
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 520 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
GT YLAPEI+K G+G VD W G+ L+ LL G PF L ++
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 574 PLRF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+F PE S +DLI LL +P+ RL A + +HPFF+
Sbjct: 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQALQHPFFE 364
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+++ + + LG G V T FA K+++ + R I + L H
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQH 63
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L+ + + F LV + GG+L +++SE A + ++L ++ Y H
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 399 MLGIIYRDLKPENVLVREDGH---IMLSDFDLSL 429
GI++R+LKPEN+L+ + L+DF L++
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT YL+PE++K + + VD W G+ LY LL G PF + +
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 578 --PESPSVSFAARDLIRGLLVKEPQHRL 603
PE +V+ A+ LI +L P+ R+
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+++ + + LG G V T FA K+++ + R I + L H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQH 64
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L+ + + F LV + GG+L +++SE A + ++L ++ Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 399 MLGIIYRDLKPENVLVREDGH---IMLSDFDLSL 429
GI++R+LKPEN+L+ + L+DF L++
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT YL+PE++K + + VD W G+ LY LL G PF + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 578 --PESPSVSFAARDLIRGLLVKEPQHRL 603
PE +V+ A+ LI +L P+ R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL--QSL 336
+ + +K +G G+ G L TK A+K ++ +REI+ +SL
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE------NVQREIINHRSL 73
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + T ++ME+ GG+L+ R G+ FSE ARF+ ++L + Y
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYE-RICNAGR-FSEDEARFFFQQLLSGVSY 131
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQP 456
H + I +RDLK EN L+ D + R +C S ++ L S+ S P
Sbjct: 132 CHSMQICHRDLKLENTLL---------DGSPAPRLKIC-DFGYSKSSVLHSQPKSTVGTP 181
Query: 457 ACIEPTCVIQ 466
A I P +++
Sbjct: 182 AYIAPEVLLR 191
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 517 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN----RATLFNVV 571
S VGT Y+APE++ + E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P+ +S LI + V +P R++ E+K H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRIS----IPEIKTHSWF 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+++ + + LG G V T FA K+++ + R I + L H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQH 64
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L+ + + F LV + GG+L +++SE A + ++L ++ Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 399 MLGIIYRDLKPENVLVREDGH---IMLSDFDLSL 429
GI++R+LKPEN+L+ + L+DF L++
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
F GT YL+PE++K + + VD W G+ LY LL G PF + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 578 --PESPSVSFAARDLIRGLLVKEPQHRL 603
PE +V+ A+ LI +L P+ R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G G VY + + A+K + E + + L H +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYF-SEHAARFYVAEVLLALEYLHMLGIIYR 405
F + F + ME PGG L AL + + G +E FY ++L L+YLH I++R
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 406 DLKPENVLVRE-DGHIMLSDFDLSLRCA 432
D+K +NVL+ G + +SDF S R A
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLA 174
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 517 SFVGTHEYLAPEII-KG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGN-RATLFNVVGQ 573
+F GT +Y+APEII KG G+G A D W+ G + E+ GK PF G +A +F VG
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGM 240
Query: 574 PLRFPESP-SVSFAARDLIRGLLVKEPQHR 602
PE P S+S A+ I +P R
Sbjct: 241 FKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LG G G VY + + A+K + E + + L H +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYF-SEHAARFYVAEVLLALEYLHMLGIIYR 405
F + F + ME PGG L AL + + G +E FY ++L L+YLH I++R
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 406 DLKPENVLVRE-DGHIMLSDFDLSLRCA 432
D+K +NVL+ G + +SDF S R A
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLA 160
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 517 SFVGTHEYLAPEII-KG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGN-RATLFNVVGQ 573
+F GT +Y+APEII KG G+G A D W+ G + E+ GK PF G +A +F VG
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGM 226
Query: 574 PLRFPESP-SVSFAARDLIRGLLVKEPQHR 602
PE P S+S A+ I +P R
Sbjct: 227 FKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
L FE D LV E GG + A Q+Q K+F+E A V +V AL++LH GI
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQ--KHFNEREASRVVRDVAAALDFLHTKGIA 133
Query: 404 YRDLKPENVLVREDGH---IMLSDFDLS 428
+RDLKPEN+L + + DFDL
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLG 161
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 26/123 (21%)
Query: 520 GTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKG------AGNRATLF 568
G+ EY+APE++ + + D W+ G+ LY +L G PF G +R +
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 569 NVVGQPL---------RFPES--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
V L FP+ +S A+DLI LLV++ + RL+ A +V +HP+
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 618 FQS 620
Q
Sbjct: 299 VQG 301
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 330 REILQSLDHPFLPTLYTHFE-----TDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
R+ L + HP + ++ E D +VME+ G L +R G+ A
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL----KRSKGQKLPVAEAI 185
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVRED 417
Y+ E+L AL YLH +G++Y DLKPEN+++ E+
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQP--GKYFSEHAARFY 386
E +L+ L H + TL+ T+K LV E+ L+Q G + H + +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKD----LKQYLDDCGNIINMHNVKLF 105
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPT 436
+ ++L L Y H +++RDLKP+N+L+ E G + L+DF L+ R PT
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA-RAKSIPT 154
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 33/132 (25%)
Query: 519 VGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVGQP 574
V T Y P+I+ G + + +D W G YE+ G+ F G+ L F ++G P
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP 220
Query: 575 ----------------LRFPE---------SPSVSFAARDLIRGLLVKEPQHRLAYRRGA 609
+P+ +P + DL+ LL E ++R++ A
Sbjct: 221 TEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS----A 276
Query: 610 TEVKRHPFFQSV 621
+ +HPFF S+
Sbjct: 277 EDAMKHPFFLSL 288
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGK------YFSEHA 382
E + + HP + + YT F LVM+ GG + + + K E
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 383 ARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ EVL LEYLH G I+RD+K N+L+ EDG + ++DF +S
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 517 SFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF-KGAGNRATLFNVVGQP 574
+FVGT ++APE+++ G+ D W+FGI EL G P+ K + + + P
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 239
Query: 575 LRFPESPSVSFAARD-------------LIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
PS+ +D +I L K+P+ R A E+ RH FFQ
Sbjct: 240 ------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQ 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGK------YFSEHAARFYVAEVL 391
HP + + YT F LVM+ GG + + + K E + EVL
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
LEYLH G I+RD+K N+L+ EDG + ++DF +S
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 517 SFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF-KGAGNRATLFNVVGQP 574
+FVGT ++APE+++ G+ D W+FGI EL G P+ K + + + P
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244
Query: 575 LRFPESPSVSFAARD-------------LIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
PS+ +D +I L K+P+ R A E+ RH FFQ
Sbjct: 245 ------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQ 292
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 516 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 250
Query: 576 RF--PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
F PE +V+ A++LI +L P R+ A + +HP+
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTINPAKRIT----ADQALKHPW 290
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G V +A K+++ + R I + L H
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR-ICRLLKH 89
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L+ + F LV + GG+L +Y+SE A + ++L ++ ++H
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 399 MLGIIYRDLKPENVLVR---EDGHIMLSDFDLSL 429
I++RDLKPEN+L+ + + L+DF L++
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL--QSL 336
+ ++L+K +G G+ G L + A+K ++ +REI+ +SL
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA------NVKREIINHRSL 72
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + T +VME+ GG+L R G+ FSE ARF+ +++ + Y
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSY 130
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQP 456
H + + +RDLK EN L+ D + R +C S ++ L S+ S P
Sbjct: 131 CHAMQVCHRDLKLENTLL---------DGSPAPRLKIC-DFGYSKSSVLHSQPKSTVGTP 180
Query: 457 ACIEPTCVIQ 466
A I P +++
Sbjct: 181 AYIAPEVLLK 190
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 517 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN----RATLFNVV 571
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P+ +S R LI + V +P R++ E++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL--QSL 336
+ ++L+K +G G+ G L + A+K ++ +REI+ +SL
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDE------NVKREIINHRSL 72
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + T +VME+ GG+L R G+ FSE ARF+ +++ + Y
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSY 130
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQP 456
H + + +RDLK EN L+ D + R +C S ++ L S+ S P
Sbjct: 131 CHAMQVCHRDLKLENTLL---------DGSPAPRLKIC-AFGYSKSSVLHSQPKSTVGTP 180
Query: 457 ACIEPTCVIQ 466
A I P +++
Sbjct: 181 AYIAPEVLLK 190
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 517 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN----RATLFNVV 571
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P+ +S R LI + V +P R++ E++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 279 NHFKLLKR-LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
NH LL LG G +V+ T FA+KV + E E+L+ L+
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN 65
Query: 338 HPFLPTLYTHFE--TDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA--EVLLA 393
H + L+ E T + L+MEFCP G L+ + + +P + + F + +V+
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGG 124
Query: 394 LEYLHMLGIIYRDLKPENVL--VREDGHIM--LSDF 425
+ +L GI++R++KP N++ + EDG + L+DF
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 520 GTHEYLAPEIIK--------GEGHGSAVDWWTFGIFLYELLFGKTPFK 559
GT EYL P++ + + +G+ VD W+ G+ Y G PF+
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L+ F + LVME GG+L + + K+FSE A + + +++ A+ ++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVSHM 122
Query: 398 HMLGIIYRDLKPENVLVREDG---HIMLSDFDLS 428
H +G+++RDLKPEN+L ++ I + DF +
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFA 156
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 521 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPES 580
T Y APE++ G+ + D W+ G+ LY +L G+ PF+ T + V + +
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 581 ---------PSVSFAARDLIRGLLVKEPQHRL 603
+VS A+DLI+GLL +P RL
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E +L+ L HP L L F + LV E+C LH L + Q G EH +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG--VPEHLVKSITW 109
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ L A+ + H I+RD+KPEN+L+ + I L DF +
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA 149
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 34/133 (25%)
Query: 519 VGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLYELLFGKTPFKGAGN-------RATLFNV 570
V T Y +PE++ G+ +G VD W G ELL G + G + R TL ++
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 571 V--------------GQPLRFPES--------PSVSFAARDLIRGLLVKEPQHRLAYRRG 608
+ G + PE P++S+ A L++G L +P RL
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT---- 278
Query: 609 ATEVKRHPFFQSV 621
++ HP+F+++
Sbjct: 279 CEQLLHHPYFENI 291
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 15/180 (8%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+GS+ + ++ + +G G G+VY + + A+K + T RE+
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 333 -----LQSLDHPFLPTLYTHFETDKFS-----CLVMEFCPGGDLHALRQRQPGKYFSEHA 382
L++ +HP + L T + LV E DL + P
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAET 121
Query: 383 ARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL----SLRCAVCPTLV 438
+ + + L L++LH I++RDLKPEN+LV G + L+DF L S + A+ P +V
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---AGNRATLFNVVGQP 574
V T Y APE++ + + VD W+ G E+ K F G A +F+++G P
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 271 SHM-GSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTE 329
SHM G + +K++ +LG G + +VYL+E A+K + + E
Sbjct: 2 SHMIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI--FIPPREKEETLKRFE 59
Query: 330 REILQS--LDHPFLPTLYTHFETDKFSCLVMEFCPGGDL-HALRQRQPGKYFSEHAARFY 386
RE+ S L H + ++ E D LVME+ G L + P S A +
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINF 116
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSL 445
++L +++ H + I++RD+KP+N+L+ D + L FD + A+ T + +N L
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSETSLTQTNHVL 173
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 503 LPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
+ + ++E + ++ +GT +Y +PE KGE D ++ GI LYE+L G+ PF G
Sbjct: 157 IAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 279 NHFKLLKR-LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
NH LL LG G +V+ T FA+KV + E E+L+ L+
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN 65
Query: 338 HPFLPTLYTHFE--TDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA--EVLLA 393
H + L+ E T + L+MEFCP G L+ + + +P + + F + +V+
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGG 124
Query: 394 LEYLHMLGIIYRDLKPENVL--VREDGHIM--LSDF 425
+ +L GI++R++KP N++ + EDG + L+DF
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 516 MSFVGTHEYLAPEIIK--------GEGHGSAVDWWTFGIFLYELLFGKTPFK 559
+S GT EYL P++ + + +G+ VD W+ G+ Y G PF+
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL--QSL 336
+ ++L+K +G G+ G L + A+K ++ +REI+ +SL
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDE------NVKREIINHRSL 71
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + T +VME+ GG+L R G+ FSE ARF+ +++ + Y
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSY 129
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQP 456
H + + +RDLK EN L+ D + R +C S ++ L S+ S P
Sbjct: 130 CHAMQVCHRDLKLENTLL---------DGSPAPRLKIC-DFGYSKSSVLHSQPKSTVGTP 179
Query: 457 ACIEPTCVIQ 466
A I P +++
Sbjct: 180 AYIAPEVLLK 189
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 517 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN----RATLFNVV 571
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P+ +S R LI + V +P R++ E++ H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 276
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXX--XXXXXXQTEREILQSLDH 338
+ L +G G G V ++ T+ A+K+M+ +TE +++ L H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDL-------------------------------- 366
P + LY +E +++ CLVME C GG L
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 367 -------HALRQR----QPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
H R+ Q K S + ++ AL YLH GI +RD+KPEN L
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISN-----IMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 416 EDG--HIMLSDFDLS 428
+ I L DF LS
Sbjct: 203 TNKSFEIKLVDFGLS 217
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 520 GTHEYLAPEIIK--GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
GT ++APE++ E +G D W+ G+ L+ LL G PF G + T+ V+ + L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 578 --PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P +S ARDL+ LL + R A +HP+
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERF----DAMRALQHPWI 334
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
R EA + +G L + F+ + LG G+ G V+ + A K++
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 110
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++L + P++ Y F +D + ME GG L + ++ G+ +
Sbjct: 111 NQII--RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQI 167
Query: 382 AARFYVAEVLLALEYLHML-GIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +A V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 168 LGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
++G G G V ++ T A+K MD E I++ H + +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF---NEVVIMRDYHHDNVVDMY 108
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ + +VMEF GG AL +E VL AL YLH G+I+R
Sbjct: 109 SSYLVGDELWVVMEFLEGG---ALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 406 DLKPENVLVREDGHIMLSDF 425
D+K +++L+ DG I LSDF
Sbjct: 166 DIKSDSILLTSDGRIKLSDF 185
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ-PLR 576
VGT ++APE+I +G+ VD W+ GI + E++ G+ P+ + + P R
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPR 260
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPP 632
+ VS R + +LV+EP R A E+ HPF ++ A PP
Sbjct: 261 VKDLHKVSSVLRGFLDLMLVREPSQRAT----AQELLGHPF--------LKLAGPP 304
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI--LQSLDH 338
++ L LG G +VY + T A+K + REI LQ L H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L F LV +F DL + + H + Y+ L LEYLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHI-KAYMLMTLQGLEYLH 129
Query: 399 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
I++RDLKP N+L+ E+G + L+DF L+
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLA 159
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF 558
V T Y APE++ G +G VD W G L ELL + PF
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGAGNRATLFNVVGQPLR 576
VGT ++APE+I + + VD W+ GI + E++ G+ P F + +A P +
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK 260
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASP 631
S VS RD + +LV++PQ R A E+ HPF + L C P
Sbjct: 261 LKNSHKVSPVLRDFLERMLVRDPQERAT----AQELLDHPFL--LQTGLPECLVP 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
++G G G V L+ + A+K+MD E I++ H + +Y
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF---NEVVIMRDYQHFNVVEMY 108
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ + ++MEF GG AL +E VL AL YLH G+I+R
Sbjct: 109 KSYLVGEELWVLMEFLQGG---ALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 406 DLKPENVLVREDGHIMLSDF 425
D+K +++L+ DG + LSDF
Sbjct: 166 DIKSDSILLTLDGRVKLSDF 185
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL--QSL 336
+ ++L+K +G G+ G L A+K ++ +REI+ +SL
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDE------NVKREIINHRSL 72
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + T +VME+ GG+L R G+ FSE ARF+ +++ + Y
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSY 130
Query: 397 LHMLGIIYRDLKPENVLVREDG----HIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSY 452
H + + +RDLK EN L+ DG + ++DF S + L S+ S
Sbjct: 131 AHAMQVAHRDLKLENTLL--DGSPAPRLKIADFGY------------SKASVLHSQPKSA 176
Query: 453 CVQPACIEPTCVIQ 466
PA I P +++
Sbjct: 177 VGTPAYIAPEVLLK 190
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 517 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN----RATLFNVV 571
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 572 GQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P+ +S R LI + V +P R++ E++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 328 TEREILQSLDHPFLPTLYTHF-----------ETDKFSCLV--MEFCPGGDLHALRQRQP 374
+E +L SL+H ++ Y + K S L ME+C G L+ L +
Sbjct: 51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN 110
Query: 375 GKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVC 434
+ R + ++L AL Y+H GII+RDLKP N+ + E ++ + DF L+
Sbjct: 111 LNQQRDEYWRLF-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 435 PTLVK--SSNTSLESKNLSYCVQPACIEPTCVI 465
++K S N S NL+ + A T V+
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 510 PTSARSM-SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATL 567
P S+ ++ S +GT Y+A E++ G GH +D ++ GI +E+++ PF R +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237
Query: 568 FNVVGQPLRFPESPSVSF----------AARDLIRGLLVKEPQHR 602
+ LR S S+ F + +IR L+ +P R
Sbjct: 238 L----KKLR---SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKR 275
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 26/122 (21%)
Query: 520 GTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKGA------------- 561
G+ EY+APE+++ +++ D W+ G+ LY LL G PF G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 562 -GNRATLFNVVGQ-PLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
+ LF + + FP+ +S AA+DLI LLV++ + RL+ A +V +HP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 618 FQ 619
Q
Sbjct: 299 VQ 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 351 DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPE 410
D+F LV E GG + L ++F+E A V +V AL++LH GI +RDLKPE
Sbjct: 84 DRFY-LVFEKMRGGSI--LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 411 NVLVREDGH---IMLSDFDL 427
N+L + + DFDL
Sbjct: 141 NILCEHPNQVSPVKICDFDL 160
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F L+ +G G G+VY + + A+K M E LQ L HP
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ + + LVME+C G L + E AA + A L L YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA--LQGLAYLHSH 173
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
+I+RD+K N+L+ E G + L DF
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDF 198
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 494 NEMHNQVSPLPELIAEPT--------SARSMS----FVGTHEYLAPEIIKGEGHG---SA 538
N +H V L++EP SA M+ FVGT ++APE+I G
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 539 VDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
VD W+ GI EL K P + L+++ +S S R+ + L K
Sbjct: 234 VDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKI 293
Query: 599 PQHR 602
PQ R
Sbjct: 294 PQDR 297
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 519 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN----RATLFNVVGQ 573
VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P+ +S R LI + V +P R++ E++ H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL--QSL 336
+ ++L+K +G G+ G L + A+K ++ +REI+ +SL
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDE------NVKREIINHRSL 72
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
HP + T +VME+ GG+L R G+ FSE ARF+ +++ + Y
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSY 130
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQP 456
H + + +RDLK EN L+ D + R +C S ++ L S+ P
Sbjct: 131 CHAMQVCHRDLKLENTLL---------DGSPAPRLKIC-AFGYSKSSVLHSQPKDTVGTP 180
Query: 457 ACIEPTCVIQ 466
A I P +++
Sbjct: 181 AYIAPEVLLK 190
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 516 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
MS G + ++APE+I+ D W++G+ L+ELL G+ PF+G A + V L
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL 231
Query: 576 RFP 578
P
Sbjct: 232 ALP 234
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 15/153 (9%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
+G G G VY + +G + D Q E ++ L HP + L
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQ-EAKLFAMLKHPNIIALRG 73
Query: 347 HFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH---MLGII 403
+ CLVMEF GG L+ + GK + ++ + YLH ++ II
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 404 YRDLKPENVLVR---EDGH-----IMLSDFDLS 428
+RDLK N+L+ E+G + ++DF L+
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 26/122 (21%)
Query: 520 GTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKG------AGNRA--- 565
G+ EY+APE+++ +++ D W+ G+ LY LL G PF G +R
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 566 -----TLFNVVGQ-PLRFPES--PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPF 617
LF + + FP+ +S AA+DLI LLV++ + RL+ A +V +HP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 618 FQ 619
Q
Sbjct: 299 VQ 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 351 DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPE 410
D+F LV E GG + L ++F+E A V +V AL++LH GI +RDLKPE
Sbjct: 84 DRFY-LVFEKMRGGSI--LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 411 NVLVREDGH---IMLSDFDL 427
N+L + + DF L
Sbjct: 141 NILCEHPNQVSPVKICDFGL 160
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F L+ +G G G+VY + + A+K M E LQ L HP
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ + + LVME+C G L + E AA + A L L YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA--LQGLAYLHSH 134
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
+I+RD+K N+L+ E G + L DF
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDF 159
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 494 NEMHNQVSPLPELIAEPT--------SARSMS----FVGTHEYLAPEIIKGEGHGS---A 538
N +H V L++EP SA M+ FVGT ++APE+I G
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 539 VDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
VD W+ GI EL K P + L+++ +S S R+ + L K
Sbjct: 195 VDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKI 254
Query: 599 PQHR 602
PQ R
Sbjct: 255 PQDR 258
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ FK L++LG G +VY T + A+K + E +++ L H
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALK--EVKLDSEEGTPSTAIREISLMKELKH 62
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPG---KYFSEHAARFYVAEVLLALE 395
+ LY T+ LV EF + R G + + +++ ++L L
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ H I++RDLKP+N+L+ + G + L DF L+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 517 SFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVG 572
S V T Y AP+++ G + +++D W+ G L E++ GK F G + L F+++G
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226
Query: 573 QP 574
P
Sbjct: 227 TP 228
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+++ +RLG G G Y+ + T + + E +I++ L+HP
Sbjct: 17 WEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 341 L------PTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQPGKYFSEHAARFYVAEVLLA 393
+ P + L ME+C GGDL L Q + E R ++++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 394 LEYLHMLGIIYRDLKPENVLVR 415
L YLH II+RDLKPEN++++
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQ 156
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
FVGT +YLAPE+++ + + VD+W+FG +E + G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+N + L +G G G V+ T A+K M + +L+S D
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-VVLKSHD 82
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
P++ + F T+ + ME G L++R G + VA ++ AL YL
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVA-IVKALYYL 140
Query: 398 -HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQP 456
G+I+RD+KP N+L+ E G I L DF +S R LV + +Y + P
Sbjct: 141 KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGR------LVDDKAKDRSAGCAAY-MAP 193
Query: 457 ACIEPTCVIQPD 468
I+P +PD
Sbjct: 194 ERIDPPDPTKPD 205
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 76/220 (34%), Gaps = 30/220 (13%)
Query: 415 REDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQ--PACIEPTCVIQPDCIQP 472
+E+ +L D D+ L+ CP +V+ T + + ++ ++ C E I
Sbjct: 64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPE 123
Query: 473 ACFAPRFMXXXXXXXXXXXXXNEMHNQVSPLPELIAEPTSARSMSF-------------- 518
+ +H V P L+ E + F
Sbjct: 124 RILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR 183
Query: 519 -VGTHEYLAPEIIK-----GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
G Y+APE I + D W+ GI L EL G+ P+K N T F V+
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK---NCKTDFEVLT 240
Query: 573 QPLR-----FPESPSVSFAARDLIRGLLVKEPQHRLAYRR 607
+ L+ P S + ++ L K+ + R Y +
Sbjct: 241 KVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNK 280
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+++ +RLG G G Y+ + T + + E +I++ L+HP
Sbjct: 16 WEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 341 L------PTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQPGKYFSEHAARFYVAEVLLA 393
+ P + L ME+C GGDL L Q + E R ++++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 394 LEYLHMLGIIYRDLKPENVLVR 415
L YLH II+RDLKPEN++++
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQ 155
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
FVGT +YLAPE+++ + + VD+W+FG +E + G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYV 387
E ++++ L+HP + DK + E+ GG L + + +Y +S+ + +
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS--FA 114
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++ + YLH + II+RDL N LVRE+ +++++DF L+
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL 552
+ +P + + VG ++APE+I G + VD ++FGI L E++
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
R EA + +G L + F+ + LG G+ G V+ + A K++
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 75
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++L + P++ Y F +D + ME GG L + ++ G+ +
Sbjct: 76 NQII--RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQI 132
Query: 382 AARFYVAEVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +A V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 133 LGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q S+ +F V ++L L+Y+H GII+RDLKP NV V ED + +
Sbjct: 116 GADLNNIVKSQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
Query: 423 SDFDLS 428
DF L+
Sbjct: 173 LDFGLA 178
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 518 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGA---GNRATLFNVVGQ 573
+V T Y APEI+ H VD W+ G + ELL GK F G+ + VVG
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGT 247
Query: 574 P 574
P
Sbjct: 248 P 248
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E +L+ L HP + +L +++ LV EF L + + G + + Y+
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLY 126
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L + + H I++RDLKP+N+L+ DG + L+DF L+
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 33/133 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVG-- 572
V T Y AP+++ G + + ++VD W+ G E++ GK F G + L F+++G
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 573 QPLRFPES-----------------------PSVSFAARDLIRGLLVKEPQHRLAYRRGA 609
P +P+ P DL+ +L +P R++ R
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR--- 296
Query: 610 TEVKRHPFFQSVN 622
+ HP+F+ ++
Sbjct: 297 -DAMNHPYFKDLD 308
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 279 NHFKLLKRLGCGDIGSVYLSEL--MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
H K + +LG G+ GSV L +G T A+ + Q E +IL++L
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQRDFQREIQILKAL 68
Query: 337 DHPFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF--YVAEVLL 392
F+ ++ + LVME+ P G L QR + A+R Y +++
Sbjct: 69 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQICK 125
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+EYL ++RDL N+LV + H+ ++DF L+
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E +L+ L HP + +L +++ LV EF L + + G + + Y+
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLY 126
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L + + H I++RDLKP+N+L+ DG + L+DF L+
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 33/133 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVG-- 572
V T Y AP+++ G + + ++VD W+ G E++ GK F G + L F+++G
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 573 QPLRFPES-----------------------PSVSFAARDLIRGLLVKEPQHRLAYRRGA 609
P +P+ P DL+ +L +P R++ R
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR--- 296
Query: 610 TEVKRHPFFQSVN 622
+ HP+F+ ++
Sbjct: 297 -DAMNHPYFKDLD 308
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
++G G G V ++ + + A+K MD E I++ H + +Y
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 214
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +VMEF GG L + + E A +A VL AL LH G+I+R
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLA-VLQALSVLHAQGVIHR 271
Query: 406 DLKPENVLVREDGHIMLSDF 425
D+K +++L+ DG + LSDF
Sbjct: 272 DIKSDSILLTHDGRVKLSDF 291
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGAGNRATLFNVVG 572
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 362
Query: 573 QPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P R VS + + + LLV++P A R A E+ +HPF
Sbjct: 363 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 404
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 279 NHFKLLKRLGCGDIGSVYLSEL--MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
H K + +LG G+ GSV L +G T A+ + Q E +IL++L
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQRDFQREIQILKAL 69
Query: 337 DHPFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF--YVAEVLL 392
F+ ++ + LVME+ P G L QR + A+R Y +++
Sbjct: 70 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQICK 126
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+EYL ++RDL N+LV + H+ ++DF L+
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 279 NHFKLLKRLGCGDIGSVYLSEL--MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
H K + +LG G+ GSV L +G T A+ + Q E +IL++L
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQRDFQREIQILKAL 81
Query: 337 DHPFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF--YVAEVLL 392
F+ ++ + LVME+ P G L QR + A+R Y +++
Sbjct: 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQICK 138
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+EYL ++RDL N+LV + H+ ++DF L+
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 24/196 (12%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LGCG+ GSV K + + E +I+ LD+P++ L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 347 HFETDKFSCLVMEFCPGGDLHAL----RQRQPGKYFSEHAARFYVAEVLLALEYLHMLGI 402
+ + LVME GG LH R+ P +E + +V + ++YL
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAE-----LLHQVSMGMKYLEEKNF 131
Query: 403 IYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPT 462
++RDL NVL+ + +SDF LS +L + + Y + A P
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLS--------------KALGADDSYYTARSAGKWPL 177
Query: 463 CVIQPDCIQPACFAPR 478
P+CI F+ R
Sbjct: 178 KWYAPECINFRKFSSR 193
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFK 559
++ APE I S D W++G+ ++E L +G+ P+K
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 262 RWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
R EA + +G L + F+ + LG G+ G V+ + A K++
Sbjct: 8 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 67
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++L + P++ Y F +D + ME GG L + ++ G+ +
Sbjct: 68 NQII--RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQI 124
Query: 382 AARFYVAEVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +A V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 125 LGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFN----VVG 572
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P +F +V
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN 240
Query: 573 QPLRFPESPSVSFAA--RDLIRGLLVKEPQHR 602
+P P+ PS F+ +D + L+K P R
Sbjct: 241 EPP--PKLPSGVFSLEFQDFVNKCLIKNPAER 270
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGAGNRATLFNVVG 572
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 240
Query: 573 QPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P R VS + + + LLV++P A R A E+ +HPF
Sbjct: 241 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 282
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
++G G G V ++ + + A+K MD E I++ H + +Y
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 92
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +VMEF GG L + + E A +A VL AL LH G+I+R
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLA-VLQALSVLHAQGVIHR 149
Query: 406 DLKPENVLVREDGHIMLSDF 425
D+K +++L+ DG + LSDF
Sbjct: 150 DIKSDSILLTHDGRVKLSDF 169
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
++G G G V ++ + + A+K MD E I++ H + +Y
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 94
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +VMEF GG L + + E A +A VL AL LH G+I+R
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLA-VLQALSVLHAQGVIHR 151
Query: 406 DLKPENVLVREDGHIMLSDF 425
D+K +++L+ DG + LSDF
Sbjct: 152 DIKSDSILLTHDGRVKLSDF 171
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGAGNRATLFNVVG 572
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 242
Query: 573 QPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P R VS + + + LLV++P A R A E+ +HPF
Sbjct: 243 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 284
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ ++ L+++G G G+V+ ++ T A+K + + E +L+ L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELK 59
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
H + L+ +DK LV EFC DL G E F + ++L L +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSF-LFQLLKGLGFC 117
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G + L+DF L+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
++G G G V ++ + + A+K MD E I++ H + +Y
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 137
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +VMEF GG L + + E A +A VL AL LH G+I+R
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLA-VLQALSVLHAQGVIHR 194
Query: 406 DLKPENVLVREDGHIMLSDF 425
D+K +++L+ DG + LSDF
Sbjct: 195 DIKSDSILLTHDGRVKLSDF 214
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGAGNRATLFNVVG 572
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 285
Query: 573 QPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P R VS + + + LLV++P A R A E+ +HPF
Sbjct: 286 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 327
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 277 GLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
G+ +F+ ++++G G G VY + T A+K + + E +L+ L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYV 387
+HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYL 109
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
RLG G G V+ E T A+K + E L P + LY
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA--------EELMACAGLTSPRIVPLY 151
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ + ME GG L L + Q E A +Y+ + L LEYLH I++
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 406 DLKPENVLVREDG-HIMLSDF 425
D+K +NVL+ DG H L DF
Sbjct: 210 DVKADNVLLSSDGSHAALCDF 230
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT ++APE++ G + VD W+ + +L G P+ + +P E
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 312
Query: 580 -SPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR 614
PS + I+ L KEP HR++ +V R
Sbjct: 313 IPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNR 348
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGAGNRATLFNVVG 572
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231
Query: 573 QPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P R VS + + + LLV++P A R A E+ +HPF
Sbjct: 232 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
++G G G V ++ + + A+K MD E I++ H + +Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 83
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +VMEF GG L + + E A +A VL AL LH G+I+R
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLA-VLQALSVLHAQGVIHR 140
Query: 406 DLKPENVLVREDGHIMLSDF 425
D+K +++L+ DG + LSDF
Sbjct: 141 DIKSDSILLTHDGRVKLSDF 160
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGAGNRATLFNVVG 572
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 235
Query: 573 QPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P R VS + + + LLV++P A R A E+ +HPF
Sbjct: 236 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
++G G G V ++ + + A+K MD E I++ H + +Y
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 87
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +VMEF GG L + + E A +A VL AL LH G+I+R
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLA-VLQALSVLHAQGVIHR 144
Query: 406 DLKPENVLVREDGHIMLSDF 425
D+K +++L+ DG + LSDF
Sbjct: 145 DIKSDSILLTHDGRVKLSDF 164
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q S+ +F V ++L L+Y+H GII+RDLKP NV V ED + +
Sbjct: 116 GADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
Query: 423 SDFDLS 428
DF L+
Sbjct: 173 LDFGLA 178
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGA---G 562
+A +V T Y APEI+ H VD W+ G + ELL GK F G+
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 563 NRATLFNVVGQP 574
+ VVG P
Sbjct: 237 QLKRIMEVVGTP 248
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
RLG G G V+ E T A+K + E L P + LY
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA--------EELMACAGLTSPRIVPLY 132
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ + ME GG L L + Q E A +Y+ + L LEYLH I++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 406 DLKPENVLVREDG-HIMLSDF 425
D+K +NVL+ DG H L DF
Sbjct: 191 DVKADNVLLSSDGSHAALCDF 211
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPE 579
GT ++APE++ G + VD W+ + +L G P+ + +P E
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 293
Query: 580 -SPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR 614
PS + I+ L KEP HR++ +V R
Sbjct: 294 IPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNR 329
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G + V+L+ + A+KV+ + E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 339 PFLPTLYTHFETDK----FSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
P + +Y E + +VME+ G L + + G + A +A+ AL
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQAL 129
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 432
+ H GII+RD+KP N+L+ + + DF ++ A
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIA 167
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVME-FCPGGDLHALRQRQPGKYFSEHAARFYV 387
E IL ++H + + FE F LVME G DL A R P E A +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIF 136
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 425
+++ A+ YL + II+RD+K EN+++ ED I L DF
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 517 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPF 558
+F GT EY APE++ G + G ++ W+ G+ LY L+F + PF
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D LRQ +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLRQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSEL--MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
H K + +LG G+ GSV L +G T A+ + Q E +IL++L
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQRDFQREIQILKAL 65
Query: 337 DHPFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
F+ ++ LVME+ P G L QR + + Y +++ +
Sbjct: 66 HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICKGM 124
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
EYL ++RDL N+LV + H+ ++DF L+
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 282
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 283 AALAHPFFQDVT 294
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G + V+L+ + A+KV+ + E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 339 PFLPTLYTHFETDK----FSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
P + +Y E + +VME+ G L + + G + A +A+ AL
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQAL 129
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 432
+ H GII+RD+KP N+++ + + DF ++ A
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 517 SFVGTHEYLAPEIIKGEGHG-----------SAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
S VGT Y+ PE IK D W+ G LY + +GKTPF+ N+
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 566 TLFNVVGQP---LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ + + P + FP+ P +D+++ L ++P+ R++ E+ HP+ Q
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS----IPELLAHPYVQ 297
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY + TD++ +VME C DL++ +++ K + Y +L A+ +H GI+
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+ DLKP N L+ DG + L DF ++
Sbjct: 150 HSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 280
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 281 AALAHPFFQDVT 292
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 510 PTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFN 569
P ++ + VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 570 VV--GQP-LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ G P L+ PE S F RD + L + + R A E+ +H F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCL----EMDVEKRGSAKELIQHQFLK 275
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ +++G G G+VY + + T A++ M+ E +++ +P
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPN 79
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ + +VME+ GG L + E E L ALE+LH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 136
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
+I+R++K +N+L+ DG + L+DF
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDF 161
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q S+ +F V ++L L+Y+H GII+RDLKP NV V ED + +
Sbjct: 108 GADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI 164
Query: 423 SDFDLS 428
DF L+
Sbjct: 165 LDFGLA 170
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGA---G 562
+A +V T Y APEI+ H VD W+ G + ELL GK F G+
Sbjct: 169 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 228
Query: 563 NRATLFNVVGQP 574
+ VVG P
Sbjct: 229 QLKRIMEVVGTP 240
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 371 QRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Q+ G FSE ++ V ++L L+Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 134 QKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 53/143 (37%), Gaps = 34/143 (23%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGA---G 562
+A A +V T Y APE+I H VD W+ G + E+L GKT FKG
Sbjct: 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 563 NRATLFNVVGQP-----------------LRFPESPSVSFA---------ARDLIRGLLV 596
+ V G P P++P F A DL+ +L
Sbjct: 250 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309
Query: 597 KEPQHRLAYRRGATEVKRHPFFQ 619
+ RL A + HPFF+
Sbjct: 310 LDVDKRLT----AAQALTHPFFE 328
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 328 TEREILQSLDHPFLPTLYTHF-----------ETDKFSCLV--MEFCPGGDLHALRQRQP 374
+E +L SL+H ++ Y + K S L ME+C L+ L +
Sbjct: 51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN 110
Query: 375 GKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVC 434
+ R + ++L AL Y+H GII+RDLKP N+ + E ++ + DF L+
Sbjct: 111 LNQQRDEYWRLF-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 435 PTLVK--SSNTSLESKNLSYCVQPACIEPTCVI 465
++K S N S NL+ + A T V+
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 510 PTSARSM-SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATL 567
P S+ ++ S +GT Y+A E++ G GH +D ++ GI +E+++ PF R +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237
Query: 568 FNVVGQPLRFPESPSVSF----------AARDLIRGLLVKEPQHR 602
+ LR S S+ F + +IR L+ +P R
Sbjct: 238 L----KKLR---SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKR 275
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G + V+L+ + A+KV+ + E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 339 PFLPTLYTHFETDK----FSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
P + +Y E + +VME+ G L + + G + A +A+ AL
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQAL 129
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 432
+ H GII+RD+KP N+++ + + DF ++ A
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G + V+L+ + A+KV+ + E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 339 PFLPTLYTHFETDK----FSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
P + +Y E + +VME+ G L + + G + A +A+ AL
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQAL 129
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 432
+ H GII+RD+KP N+++ + + DF ++ A
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G + + V +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 574 PLRFPESPSVSFAARDL---IRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCAS 630
P + +A DL + L K P++R + A E++ + +
Sbjct: 235 DPIPPSARHEGLSA-DLDAVVLKALAKNPENRY---QTAAEMR-------ADLVRVHNGE 283
Query: 631 PPDVPK 636
PP+ PK
Sbjct: 284 PPEAPK 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 274 GSLG-LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
G LG + +F+ ++++G G G VY + T A+K + + E +
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISL 59
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
L+ L+HP + L T+ LV EF DL + Y+ ++L
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 283
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 284 AALAHPFFQDVT 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 62
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 281
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 282 AALAHPFFQDVT 293
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G + V+L+ + A+KV+ + E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 339 PFLPTLYTHFETDK----FSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
P + +Y E + +VME+ G L + + G + A +A+ AL
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQAL 129
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 432
+ H GII+RD+KP N+++ + + DF ++ A
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 341 LPTLYTHFET-DKFS--CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
L ++T ET D F+ LVM F G DL L + + E +F V ++L L Y+
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK---LGEDRIQFLVYQMLKGLRYI 144
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H GII+RDLKP N+ V ED + + DF L+
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 34/146 (23%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A + V T Y APE+I + VD W+ G + E++ GKT FKG+ +
Sbjct: 174 LARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 566 TL---FNVVGQP-----------------LRFPESPSVSFA---------ARDLIRGLLV 596
L V G P PE FA A +L+ +LV
Sbjct: 234 QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293
Query: 597 KEPQHRLAYRRGATEVKRHPFFQSVN 622
+ + R+ A E HP+F+S++
Sbjct: 294 LDAEQRVT----AGEALAHPYFESLH 315
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 371 QRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Q+ G FSE ++ V ++L L+Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 116 QKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 53/143 (37%), Gaps = 34/143 (23%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGA---G 562
+A A +V T Y APE+I H VD W+ G + E+L GKT FKG
Sbjct: 172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 563 NRATLFNVVGQP-----------------LRFPESPSVSFA---------ARDLIRGLLV 596
+ V G P P++P F A DL+ +L
Sbjct: 232 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291
Query: 597 KEPQHRLAYRRGATEVKRHPFFQ 619
+ RL A + HPFF+
Sbjct: 292 LDVDKRLT----AAQALTHPFFE 310
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 111
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 280
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 281 AALAHPFFQDVT 292
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 264 EAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXX 323
EA ++ +G L + F+ + LG G+ G V + + A K++
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ 60
Query: 324 XXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA 383
E ++L + P++ Y F +D + ME GG L + + K E
Sbjct: 61 II--RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEIL 116
Query: 384 RFYVAEVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
VL L YL I++RD+KP N+LV G I L DF +S
Sbjct: 117 GKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
SFVGT Y+APE ++G + D W+ G+ L EL G+ P
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 510 PTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFN 569
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 570 VV--GQP-LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ G P L+ PE S F RD + L + + R A E+ +H F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCL----EMDVEKRGSAKELIQHQFLK 275
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ +++G G G+VY + + T A++ M+ E +++ +P
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPN 79
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ + +VME+ GG L + E E L ALE+LH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 136
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
+I+RD+K +N+L+ DG + L+DF
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDF 161
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 510 PTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFN 569
P ++ + VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 570 VV--GQP-LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ G P L+ PE S F RD + L + + R A E+ +H F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVEK----RGSAKELLQHQFLK 274
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ +++G G G+VY + + T A++ M+ E +++ +P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPN 78
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ + +VME+ GG L + E E L ALE+LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
+I+RD+K +N+L+ DG + L+DF
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 510 PTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFN 569
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 570 VV--GQP-LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ G P L+ PE S F RD + L + + R A E+ +H F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCL----EMDVEKRGSAKELLQHQFLK 274
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ +++G G G+VY + + T A++ M+ E +++ +P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPN 78
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ + +VME+ GG L + E E L ALE+LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
+I+RD+K +N+L+ DG + L+DF
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ ++ L+++G G G+V+ ++ T A+K + + E +L+ L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELK 59
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
H + L+ +DK LV EFC DL G E F + ++L L +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSF-LFQLLKGLGFC 117
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G + L++F L+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 274 GSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
G + +F+ ++++G G G VY + T A+K + + E +L
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLL 59
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + L T+ LV EF DL + Y+ ++L
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 394 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 282
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 283 AALAHPFFQDVT 294
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 294
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 295 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 201
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 202 SKRPNAILKLTDFGFA 217
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++L + LG G + V+L+ + A+KV+ + E + +L+H
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 339 PFLPTLYTHFETDK----FSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
P + +Y E + +VME+ G L + + G + A +A+ AL
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQAL 146
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 432
+ H GII+RD+KP N+++ + + DF ++ A
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 184
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 150 SKRPNAILKLTDFGFA 165
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 510 PTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFN 569
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 570 VV--GQP-LRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+ G P L+ PE S F RD + L + + R A E+ +H F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVEK----RGSAKELLQHQFLK 274
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+ +++G G G+VY + + T A++ M+ E +++ +P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPN 78
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+ + +VME+ GG L + E E L ALE+LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 401 GIIYRDLKPENVLVREDGHIMLSDF 425
+I+RD+K +N+L+ DG + L+DF
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 289 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 196 SKRPNAILKLTDFGFA 211
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 150 SKRPNAILKLTDFGFA 165
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 274 GSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
G + +F+ ++++G G G VY + T A+K + + E +L
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLL 59
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------R 384
+ L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 109
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y+ ++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 282
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 283 AALAHPFFQDVT 294
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 274 GSLG----LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTE 329
G LG + +F+ ++++G G G VY + T A+K + + E
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-E 59
Query: 330 REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAE 389
+L+ L+HP + L T+ LV EF DL + Y+ +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 286
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 287 AALAHPFFQDVT 298
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 152 SKRPNAILKLTDFGFA 167
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 284 LKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPT 343
L+++G G G VY ++ +T FA+K + + E IL+ L H +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVK 64
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY T K LV E DL L G S A F + ++L + Y H ++
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF-LLQLLNGIAYCHDRRVL 122
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLKP+N+L+ +G + ++DF L+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLA 147
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 521 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKG---AGNRATLFNVV 571
THE Y AP+++ G + + + +D W+ G E++ G F G A +F ++
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRIL 217
Query: 572 GQP 574
G P
Sbjct: 218 GTP 220
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 243
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 244 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 280
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 91 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 150
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 151 SKRPNAILKLTDFGFA 166
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 284 LKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPT 343
L+++G G G VY ++ +T FA+K + + E IL+ L H +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVK 64
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY T K LV E DL L G S A F + ++L + Y H ++
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF-LLQLLNGIAYCHDRRVL 122
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLKP+N+L+ +G + ++DF L+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLA 147
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 521 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKG---AGNRATLFNVV 571
THE Y AP+++ G + + + +D W+ G E++ G F G A +F ++
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
Query: 572 GQP 574
G P
Sbjct: 218 GTP 220
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 249
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 250 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 97 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 156
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 157 SKRPNAILKLTDFGFA 172
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 284 LKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPT 343
L+++G G G VY ++ +T FA+K + + E IL+ L H +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVK 64
Query: 344 LYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGII 403
LY T K LV E DL L G S A F + ++L + Y H ++
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF-LLQLLNGIAYCHDRRVL 122
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLKP+N+L+ +G + ++DF L+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLA 147
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 521 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKG---AGNRATLFNVV 571
THE Y AP+++ G + + + +D W+ G E++ G F G A +F ++
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
Query: 572 GQP 574
G P
Sbjct: 218 GTP 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 274 GSLG----LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTE 329
G LG + +F+ ++++G G G VY + T A+K + + E
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-E 59
Query: 330 REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAE 389
+L+ L+HP + L T+ LV EF DL + Y+ +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 286
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 287 AALAHPFFQDVT 298
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 152 SKRPNAILKLTDFGFA 167
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 248
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 249 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 96 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 155
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 156 SKRPNAILKLTDFGFA 171
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 24/196 (12%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
LGCG+ GSV K + + E +I+ LD+P++ L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 347 HFETDKFSCLVMEFCPGGDLHAL----RQRQPGKYFSEHAARFYVAEVLLALEYLHMLGI 402
+ + LVME GG LH R+ P +E + +V + ++YL
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAE-----LLHQVSMGMKYLEEKNF 457
Query: 403 IYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLSYCVQPACIEPT 462
++R+L NVL+ + +SDF LS +L + + Y + A P
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLS--------------KALGADDSYYTARSAGKWPL 503
Query: 463 CVIQPDCIQPACFAPR 478
P+CI F+ R
Sbjct: 504 KWYAPECINFRKFSSR 519
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFK 559
++ APE I S D W++G+ ++E L +G+ P+K
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 62
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 281
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 282 AALAHPFFQDVT 293
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 250
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 251 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 98 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 157
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 158 SKRPNAILKLTDFGFA 173
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 111
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 280
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 281 AALAHPFFQDVT 292
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 62
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 281
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 282 AALAHPFFQDVT 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 113
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 282
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 283 AALAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 62
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 112
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 281
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 282 AALAHPFFQDVT 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 111
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 280
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 281 AALAHPFFQDVT 292
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 282
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 283 AALAHPFFQDVT 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 110
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G L + F+ + LG G+ G V+ + A K++ E ++
Sbjct: 3 LGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQV 60
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
L + P++ Y F +D + ME GG L + ++ G+ + + +A V+
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIK 118
Query: 393 ALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L YL I++RD+KP N+LV G I L DF +S
Sbjct: 119 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
FVGT Y++PE ++G + D W+ G+ L E+ G+ P L +V +P
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPP-- 223
Query: 578 PESPSVSFAA--RDLIRGLLVKEPQHR 602
P+ PS F+ +D + L+K P R
Sbjct: 224 PKLPSAVFSLEFQDFVNKCLIKNPAER 250
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 110
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 109
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 278
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 279 AALAHPFFQDVT 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 278
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 279 AALAHPFFQDVT 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 110
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NVL+
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 258
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R+ TE HP+
Sbjct: 259 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 166 SKRPNAILKLTDFGFA 181
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 109
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 278
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 279 AALAHPFFQDVT 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 64
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 114
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 283
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 284 AALAHPFFQDVT 295
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 110
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 32/130 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQS 620
HPFFQ
Sbjct: 280 AALAHPFFQD 289
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 111
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 280
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 281 AALAHPFFQDVT 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV EF DL + Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 328 TEREILQSLDHPFLPTLYTHF--ETDKFSCLVMEFCPGGDLHAL-----RQRQPGKYFSE 380
+E +L+ L HP + Y T+ +VME+C GGDL ++ ++RQ Y E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDE 110
Query: 381 HAARFYVAEVLLALEYLHMLG-----IIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++ LAL+ H +++RDLKP NV + ++ L DF L+
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
+FVGT Y++PE + + D W+ G LYEL PF
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 328 TEREILQSLDHPFLPTLYTHF--ETDKFSCLVMEFCPGGDLHAL-----RQRQPGKYFSE 380
+E +L+ L HP + Y T+ +VME+C GGDL ++ ++RQ Y E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDE 110
Query: 381 HAARFYVAEVLLALEYLHMLG-----IIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++ LAL+ H +++RDLKP NV + ++ L DF L+
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
+FVGT Y++PE + + D W+ G LYEL PF
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHP 339
+F+ ++++G G G VY + T A+K + + E +L+ L+HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 340 FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVAEV 390
+ L T+ LV EF LH Q K F + +A + Y+ ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 391 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 278
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 279 AALAHPFFQDVT 290
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 328 TEREILQSLDHPFLPTLYTHF--ETDKFSCLVMEFCPGGDLHAL-----RQRQPGKYFSE 380
+E +L+ L HP + Y T+ +VME+C GGDL ++ ++RQ Y E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDE 110
Query: 381 HAARFYVAEVLLALEYLHMLG-----IIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++ LAL+ H +++RDLKP NV + ++ L DF L+
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
FVGT Y++PE + + D W+ G LYEL PF
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF------ 577
Y+APE++ E + + D W+ G+ +Y LL G PF +A + + + +R
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA-ISPGMKRRIRLGQYGFP 234
Query: 578 -PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASP 631
PE VS A+ LIR LL +P RL T+ HP+ +N +++ +P
Sbjct: 235 NPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPW---INQSMVVPQTP 282
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
++ME GG+L + Q + + F+E A + ++ A+++LH I +RD+KPEN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 415 --REDGHIMLSDFDLS 428
+D + L+DF +
Sbjct: 144 SKEKDAVLKLTDFGFA 159
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 115 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 170 DHEHRKLRLIDWGLA 184
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
F+ + LG G G V + ++A+K + +E +L SL+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL----SEVXLLASLNHQY 63
Query: 341 LPTLYTHF-----------ETDKFSCLVM--EFCPGGDLHALRQRQPGKYFSEHAARFYV 387
+ Y + K S L + E+C L+ L + + R +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF- 122
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVK--SSNTSL 445
++L AL Y+H GII+R+LKP N+ + E ++ + DF L+ ++K S N
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 446 ESKNLSYCVQPACIEPTCVI 465
S NL+ + A T V+
Sbjct: 183 SSDNLTSAIGTAXYVATEVL 202
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 510 PTSARSM-SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATL 567
P S+ ++ S +GT Y+A E++ G GH +D ++ GI +E ++ PF R +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNI 237
Query: 568 FNVVGQ-PLRFPE--SPSVSFAARDLIRGLLVKEPQHR 602
+ + FP + + +IR L+ +P R
Sbjct: 238 LKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKR 275
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
+L + KLL+ +G G+ G V L + G K A+K + E ++
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQAFL-----AEASVMT 241
Query: 335 SLDHPFLPTLYTHFETDKFSC-LVMEFCPGGDL-HALRQRQPGKYFSEHAARFYVAEVLL 392
L H L L +K +V E+ G L LR R + +F + +V
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 300
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A+EYL ++RDL NVLV ED +SDF L+
Sbjct: 301 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 494 NEMHNQVSPLPELIAEPTSARSMSFVGTHE-------------YLAPEIIKGEGHGSAVD 540
N +H ++ L++E A+ F T E + APE ++ + + D
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 541 WWTFGIFLYELL-FGKTPF 558
W+FGI L+E+ FG+ P+
Sbjct: 369 VWSFGILLWEIYSFGRVPY 387
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+VME GG+L + Q + + F+E A + + A++YLH + I +RD+KPEN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 152 SKRPNAILKLTDFGFA 167
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 51/131 (38%), Gaps = 13/131 (9%)
Query: 494 NEMHNQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLF 553
N H V P L TS R + + ++ + GE + + D W+ G+ +Y LL
Sbjct: 137 NIAHRDVKPENLLY---TSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLC 193
Query: 554 GKTPFKGAGNRA------TLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRR 607
G PF A T + PE VS + LIR LL EP R+
Sbjct: 194 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--- 250
Query: 608 GATEVKRHPFF 618
TE HP+
Sbjct: 251 -ITEFMNHPWI 260
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 108 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 163 DHEHRKLRLIDWGLA 177
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
LV E D L Q +++ RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 415 -REDGHIMLSDFDLS 428
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV-----VGQ-PLRF 577
Y+APE++ E + + D W+ G+ +Y LL G PF +A + +GQ
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASP 631
PE VS A+ LIR LL +P RL T+ HP+ +N +++ +P
Sbjct: 255 PEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPW---INQSMVVPQTP 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
++ME GG+L + Q + + F+E A + ++ A+++LH I +RD+KPEN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 415 --REDGHIMLSDFDLS 428
+D + L+DF +
Sbjct: 163 SKEKDAVLKLTDFGFA 178
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 339 PFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF-------YVAE 389
+ + + L+MEF P G L +Y +H R Y ++
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR--------EYLQKHKERIDHIKLLQYTSQ 125
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +EYL I+RDL N+LV + + + DF L+
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 274 GSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
G L N F +++++G G G V L + + K ++A+KV+ + E +IL
Sbjct: 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV----RNIKKYTRSAKIEADIL 85
Query: 334 QSLDHPFLPTLYTHFETDKFS-----CLVMEFCP-GGDLHALRQRQPGKYFSEHAARFYV 387
+ + + + KF CL+ E P G L+ + R F + Y
Sbjct: 86 KKIQNDDINNNNIVKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYNGFHIEDIKLYC 143
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVRE 416
E+L AL YL + + + DLKPEN+L+ +
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDD 172
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFK 559
S + T +Y APE+I G + D W+FG L EL G F+
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 44/165 (26%)
Query: 508 AEPTSARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNR 564
+EPT +S + FV T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 565 ATL---FNVVGQP-----LRFPES----------------------PSVSFAARDLIRGL 594
L F ++G P LR ES P V+ DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 595 LVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPPDVPKQKP 639
LV +P R+ A E HP+ Q+ + P D P+ +P
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQTYH-------DPNDEPEGEP 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
E +IL+ H + T++ D F +++ DLH + Q S+ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQ 115
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+++ + L A++ LH +I+RDLKP N+L+ + + + DF L+
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
+L + KLL+ +G G+ G V L + G K A+K + E ++
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQAFL-----AEASVMT 60
Query: 335 SLDHPFLPTLYTHFETDKFSC-LVMEFCPGGDL-HALRQRQPGKYFSEHAARFYVAEVLL 392
L H L L +K +V E+ G L LR R + +F + +V
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 119
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A+EYL ++RDL NVLV ED +SDF L+
Sbjct: 120 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 494 NEMHNQVSPLPELIAEPTSARSMSFVGTHE-------------YLAPEIIKGEGHGSAVD 540
N +H ++ L++E A+ F T E + APE ++ + D
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 541 WWTFGIFLYELL-FGKTPF 558
W+FGI L+E+ FG+ P+
Sbjct: 188 VWSFGILLWEIYSFGRVPY 206
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++ +G G G V+L + K A+K + E E++ L H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 61
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P L LY CLV EF G L + Q G + +E + +V + YL
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLE 120
Query: 399 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+I+RDL N LV E+ I +SDF ++
Sbjct: 121 EASVIHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNV 570
++ +PE+ + S D W+FG+ ++E+ GK P++ N + ++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
+L + KLL+ +G G+ G V L + G K A+K + E ++
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQAFL-----AEASVMT 69
Query: 335 SLDHPFLPTLYTHFETDKFSC-LVMEFCPGGDL-HALRQRQPGKYFSEHAARFYVAEVLL 392
L H L L +K +V E+ G L LR R + +F + +V
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 128
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A+EYL ++RDL NVLV ED +SDF L+
Sbjct: 129 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 494 NEMHNQVSPLPELIAEPTSARSMSFVGTHE-------------YLAPEIIKGEGHGSAVD 540
N +H ++ L++E A+ F T E + APE ++ + + D
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 541 WWTFGIFLYELL-FGKTPF 558
W+FGI L+E+ FG+ P+
Sbjct: 197 VWSFGILLWEIYSFGRVPY 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
L ++L+K+LG G G V+ S T A+K + +T REI+ +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI---FDAFQNSTDAQRTFREIMILTE 64
Query: 338 ---HPFLPTLYTHF--ETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
H + L + D+ LV ++ DLHA+ + ++ V +++
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIR---ANILEPVHKQYVVYQLIK 120
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++YLH G+++RD+KP N+L+ + H+ ++DF LS
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 517 SFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
+V T Y APEI+ G + +D W+ G L E+L GK F G+ L ++G +
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VI 247
Query: 576 RFPESPSV 583
FP + V
Sbjct: 248 DFPSNEDV 255
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKSQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 166
Query: 423 SDFDL 427
DF L
Sbjct: 167 LDFGL 171
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRATL-- 567
T +V T Y APEI+ H VD W+ G + ELL G+T F G + L
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 568 -FNVVGQPLRFPESPSVSFAARDLIRGL 594
+VG P S +AR+ I+ L
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
+L + KLL+ +G G+ G V L + G K A+K + E ++
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQAFL-----AEASVMT 54
Query: 335 SLDHPFLPTLYTHFETDKFSC-LVMEFCPGGDL-HALRQRQPGKYFSEHAARFYVAEVLL 392
L H L L +K +V E+ G L LR R + +F + +V
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 113
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A+EYL ++RDL NVLV ED +SDF L+
Sbjct: 114 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 494 NEMHNQVSPLPELIAEPTSARSMSFVGTHE-------------YLAPEIIKGEGHGSAVD 540
N +H ++ L++E A+ F T E + APE ++ + + D
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 541 WWTFGIFLYELL-FGKTPF 558
W+FGI L+E+ FG+ P+
Sbjct: 182 VWSFGILLWEIYSFGRVPY 200
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQP 574
L +VG P
Sbjct: 231 QLKLILRLVGTP 242
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 335 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
L P + LY + + ME GG L L ++ E A +Y+ + L L
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGL 163
Query: 395 EYLHMLGIIYRDLKPENVLVREDG-HIMLSDFDLSL 429
EYLH I++ D+K +NVL+ DG L DF +L
Sbjct: 164 EYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 199
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E ++L + P++ Y F +D + ME GG L + ++ G+ + + +A
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA 112
Query: 389 EVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 113 -VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRAT---------- 566
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P +
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL 221
Query: 567 LFNVVGQPLRFPESPSVSFAA--RDLIRGLLVKEPQHR 602
L +V +P P+ PS F+ +D + L+K P R
Sbjct: 222 LDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAER 257
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 282 KLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFL 341
KL+K+LG G G V++ T A+K + E ++++L H L
Sbjct: 15 KLVKKLGAGQFGEVWMG-YYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKL 69
Query: 342 PTLYTHFETDKFSCLVMEFCPGGDL-HALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
LY ++ ++ EF G L L+ + GK F A++ + Y+
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIERK 128
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ NVLV E ++DF L+
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLA 156
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESP 581
++ APE I + W+FGI LYE++ +GK P+ G N A + + + Q R P
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN-ADVMSALSQGYRMPRME 233
Query: 582 SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
+ D++ ++ ++ A E + QSV
Sbjct: 234 NCPDELYDIM----------KMCWKEKAEERPTFDYLQSV 263
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y HA R
Sbjct: 74 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQAHAERIDHIKLLQ 121
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+RDL N+LV + + + DF L+
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E ++L + P++ Y F +D + ME GG L + ++ G+ + + +A
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA 112
Query: 389 EVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 113 -VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 274 GSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
G + +F+ ++++G G G VY + T A+K + + E +L
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLL 59
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLA 393
+ L+HP + L T+ LV E DL + Y+ ++L
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 394 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 282
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 283 AALAHPFFQDVT 294
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E ++L + P++ Y F +D + ME GG L + ++ G+ + + +A
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA 112
Query: 389 EVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 113 -VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++ +G G G V+L + K A+K + E E++ L H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 64
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P L LY CLV EF G L + Q G + +E + +V + YL
Sbjct: 65 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLE 123
Query: 399 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+I+RDL N LV E+ I +SDF ++
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMT 153
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNV 570
++ +PE+ + S D W+FG+ ++E+ GK P++ N + ++
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 327 QTEREILQSLDHP----FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHA 382
+ E ++L+ L H + LY + + +VME+C G + + P K F
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY--MVMEYCVCG-MQEMLDSVPEKRFPVCQ 110
Query: 383 ARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A Y +++ LEYLH GI+++D+KP N+L+ G + +S ++
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 520 GTHEYLAPEIIKGEG--HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 577
G+ + PEI G G VD W+ G+ LY + G PF+G N LF +G+ +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGKG-SY 230
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
DL++G+L EP R + R ++++H +F+
Sbjct: 231 AIPGDCGPPLSDLLKGMLEYEPAKRFSIR----QIRQHSWFR 268
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 352 KFSCLV--MEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKP 409
K CL MEFC G L +++ G+ + A ++ ++Y+H +I+RDLKP
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 410 ENVLVREDGHIMLSDFDL 427
N+ + + + + DF L
Sbjct: 165 SNIFLVDTKQVKIGDFGL 182
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL 552
GT Y++PE I + +G VD + G+ L ELL
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 571 VGQPLR 576
+G P R
Sbjct: 239 LGTPTR 244
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 335 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
L P + LY + + ME GG L L ++ E A +Y+ + L L
Sbjct: 120 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGL 177
Query: 395 EYLHMLGIIYRDLKPENVLVREDG-HIMLSDFDLSL 429
EYLH I++ D+K +NVL+ DG L DF +L
Sbjct: 178 EYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 7/149 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL+KRLG G G V++ T A+K + E ++++L H
Sbjct: 15 IKLVKRLGAGQFGEVWMG-YYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDK 69
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDL-HALRQRQPGKYFSEHAARFYVAEVLLALEYLHM 399
L LY ++ ++ E+ G L L+ + GK F A++ + Y+
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIER 128
Query: 400 LGIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ NVLV E ++DF L+
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLA 157
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESP 581
++ APE I D W+FGI LYE++ +GK P+ G N A + + Q R P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-ADVMTALSQGYRMPRVE 234
Query: 582 SVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
+ D++ ++ ++ A E + QSV
Sbjct: 235 NCPDELYDIM----------KMCWKEKAEERPTFDYLQSV 264
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 335 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
L P + LY + + ME GG L L ++ E A +Y+ + L L
Sbjct: 122 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGL 179
Query: 395 EYLHMLGIIYRDLKPENVLVREDG-HIMLSDFDLSL 429
EYLH I++ D+K +NVL+ DG L DF +L
Sbjct: 180 EYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 281 FKLLKRLGCGDIGSVYLSE-LMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI--LQSLD 337
FK ++ +G G G V+ ++ + KT+ +V + ERE+ L LD
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----------KYNNEKAEREVKALAKLD 62
Query: 338 HPFL---PTLYTHFETD-----------KFSCLV--MEFCPGGDLHALRQRQPGKYFSEH 381
H + + F+ D K CL MEFC G L +++ G+ +
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
A ++ ++Y+H +I RDLKP N+ + + + + DF L
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL 552
GT Y++PE I + +G VD + G+ L ELL
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++ +G G G V+L + K A+K + E E++ L H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 61
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P L LY CLV EF G L + Q G + +E + +V + YL
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLE 120
Query: 399 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+I+RDL N LV E+ I +SDF ++
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNV 570
++ +PE+ + S D W+FG+ ++E+ GK P++ N + ++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++ +G G G V+L + K A+K + E E++ L H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 59
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P L LY CLV EF G L + Q G + +E + +V + YL
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLE 118
Query: 399 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+I+RDL N LV E+ I +SDF ++
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMT 148
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNV 570
++ +PE+ + S D W+FG+ ++E+ GK P++ N + ++
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++ +G G G V+L + K A+K + E E++ L H
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIKEGSMSEDDFI----EEAEVMMKLSH 81
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P L LY CLV EF G L + Q G + +E + +V + YL
Sbjct: 82 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLE 140
Query: 399 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+I+RDL N LV E+ I +SDF ++
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMT 170
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNV 570
++ +PE+ + S D W+FG+ ++E+ GK P++ N + ++
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+ + + E +L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 110
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 279
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 280 AALAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+ + + E +L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---------RFYVA 388
HP + L T+ LV EF LH Q K F + +A + Y+
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 109
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 278
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 279 AALAHPFFQDVT 290
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E ++L + P++ Y F +D + ME GG L + ++ G+ + + +A
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA 112
Query: 389 EVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 113 -VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E ++L + P++ Y F +D + ME GG L + ++ G+ + + +A
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA 112
Query: 389 EVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 113 -VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+ ++ +G G G V+L + K A+K + E E++ L H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 62
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P L LY CLV EF G L + Q G + +E + +V + YL
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLE 121
Query: 399 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+I+RDL N LV E+ I +SDF ++
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMT 151
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNV 570
++ +PE+ + S D W+FG+ ++E+ GK P++ N + ++
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 112 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 168
Query: 423 SDFDLS 428
DF L+
Sbjct: 169 LDFGLA 174
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA------TLFNVVGQPLRF 577
Y+APE++ E + + D W+ G+ Y LL G PF A T
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPN 288
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
PE VS + LIR LL EP R TE HP+
Sbjct: 289 PEWSEVSEEVKXLIRNLLKTEPTQRXT----ITEFXNHPWI 325
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 414
+V E GG+L + Q + + F+E A + A++YLH + I +RD+KPEN+L
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 415 --REDGHIMLSDFDLS 428
R + + L+DF +
Sbjct: 196 SKRPNAILKLTDFGFA 211
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 116 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 172
Query: 423 SDFDLS 428
DF L+
Sbjct: 173 LDFGLA 178
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 84
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQTARGMDYLHAKSII 142
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 577 FPESPSV 583
P+ V
Sbjct: 244 SPDLSKV 250
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 323
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 324 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLA 410
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 599 PQHR 602
P+ R
Sbjct: 505 PEER 508
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 106
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 266
Query: 571 VGQPLR 576
+G P R
Sbjct: 267 LGTPTR 272
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 333 LQSLDHPFLPTLY---THFETDKFSCLVMEF-CPGGDLHALRQRQPGKYFSEHAARFYVA 388
L++ +HP + L+ T TD+ + L + F DL + P + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L++LH +++RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 25/138 (18%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVGQ 573
S V T Y APE++ + + VD W+ G E+ K F+G+ + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 574 PLR--FPES---PSVSFAAR-------------DLIRGLLVKEPQHRLAYRRGATEVKRH 615
P +P P +F ++ +L + LL+K A R A H
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297
Query: 616 PFFQSVNWALIRCASPPD 633
P+FQ + RC D
Sbjct: 298 PYFQDLE----RCKENLD 311
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 571 VGQPLR 576
+G P R
Sbjct: 273 LGTPTR 278
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 18 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 72
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQTARGMDYLHAKSII 130
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLA 155
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 577 FPESPSV 583
P+ V
Sbjct: 232 SPDLSKV 238
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 114
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 274
Query: 571 VGQPLR 576
+G P R
Sbjct: 275 LGTPTR 280
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 571 VGQPLR 576
+G P R
Sbjct: 273 LGTPTR 278
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 139 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 195
Query: 423 SDFDLS 428
DF L+
Sbjct: 196 LDFGLA 201
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 41/163 (25%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
Query: 566 TL---FNVVGQP-----------------LRFPESPSVSFA---------ARDLIRGLLV 596
L + G P P+ P +FA A DL+ +LV
Sbjct: 260 QLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLV 319
Query: 597 KEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPPDVPKQKP 639
+ R+ A+E HP+F + P D P+ +P
Sbjct: 320 LDTDKRIT----ASEALAHPYFSQYH-------DPDDEPESEP 351
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 117 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 423 SDFDLSLRCA 432
DF L+ A
Sbjct: 174 LDFGLARHTA 183
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T+ +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 117 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 423 SDFDLSLRCA 432
DF L+ A
Sbjct: 174 LDFGLARHTA 183
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T+ +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 116
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 276
Query: 571 VGQPLR 576
+G P R
Sbjct: 277 LGTPTR 282
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL + P + + + L L++LH I++RDLKPEN+LV G + L+D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 425 FDL----SLRCAVCPTLV 438
F L S + A+ P +V
Sbjct: 156 FGLARIYSYQMALAPVVV 173
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---AGNRATLFNVVGQP 574
V T Y APE++ + + VD W+ G E+ K F G A +F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 83
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 243
Query: 571 VGQPLR 576
+G P R
Sbjct: 244 LGTPTR 249
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 133
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y +H R
Sbjct: 71 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQ 118
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+RDL N+LV + + + DF L+
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH-ALRQRQPGKYFSEHAARFYVAEVL 391
L ++HP + LY CLVME+ GG L+ L +P Y++ A + +
Sbjct: 56 LSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 392 LALEYLHML---GIIYRDLKPENVLVREDGHIM-LSDF 425
+ YLH + +I+RDLKP N+L+ G ++ + DF
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 151
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
G+ ++APE+ +G + D +++GI L+E++ + PF G A
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 211
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 97
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 257
Query: 571 VGQPLR 576
+G P R
Sbjct: 258 LGTPTR 263
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
+ +F+ ++++G G G VY + T A+K + + E +L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 338 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
HP + L T+ LV E DL + Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 519 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV---VGQP 574
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 575 LR---------------FPESPSVSFA---------ARDLIRGLLVKEPQHRLAYRRGAT 610
FP+ F+ R L+ +L +P R++ A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AK 278
Query: 611 EVKRHPFFQSVN 622
HPFFQ V
Sbjct: 279 AALAHPFFQDVT 290
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 121 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 177
Query: 423 SDFDLS 428
DF L+
Sbjct: 178 LDFGLA 183
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 339 PFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF-------YVAE 389
+ + + L+ME+ P G L Y +H R Y ++
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQYTSQ 125
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +EYL I+RDL N+LV + + + DF L+
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 117 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 423 SDFDLSLRCA 432
DF L+ A
Sbjct: 174 LDFGLARHTA 183
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T+ +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 339 PFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF-------YVAE 389
+ + + L+ME+ P G L Y +H R Y ++
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQYTSQ 140
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +EYL I+RDL N+LV + + + DF L+
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y +H R
Sbjct: 102 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQ 149
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+RDL N+LV + + + DF L+
Sbjct: 150 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 115 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 423 SDFDLS 428
DF L+
Sbjct: 172 LDFGLA 177
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 86
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 246
Query: 571 VGQPLR 576
+G P R
Sbjct: 247 LGTPTR 252
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 115 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 423 SDFDLS 428
DF L+
Sbjct: 172 LDFGLA 177
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 77
Query: 339 PFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF-------YVAE 389
+ + + L+ME+ P G L Y +H R Y ++
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQYTSQ 129
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +EYL I+RDL N+LV + + + DF L+
Sbjct: 130 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 68
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y +H R
Sbjct: 69 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQ 116
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+RDL N+LV + + + DF L+
Sbjct: 117 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 571 VGQPLR 576
+G P R
Sbjct: 251 LGTPTR 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH-ALRQRQPGKYFSEHAARFY 386
E L ++HP + LY CLVME+ GG L+ L +P Y++ A +
Sbjct: 50 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 387 VAEVLLALEYLHML---GIIYRDLKPENVLVREDGHIM-LSDF 425
+ + YLH + +I+RDLKP N+L+ G ++ + DF
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 150
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
G+ ++APE+ +G + D +++GI L+E++ + PF G A
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 157
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 317
Query: 571 VGQPLR 576
+G P R
Sbjct: 318 LGTPTR 323
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 84
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQTARGMDYLHAKSII 142
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 577 FPESPSV 583
P+ V
Sbjct: 244 SPDLSKV 250
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA-------------GNR 564
+V T Y APE+I G G+ + VD W+ G + EL+ G F+G G
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 565 ATLFNVVGQPL------RFPESPSVSF---------------------AARDLIRGLLVK 597
+ F QP P+ P + F ARDL+ +LV
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 598 EPQHRLAYRRGATEVKRHPFF 618
+P R++ E RHP+
Sbjct: 305 DPDKRIS----VDEALRHPYI 321
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 69
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y +H R
Sbjct: 70 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQ 117
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+RDL N+LV + + + DF L+
Sbjct: 118 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 67/165 (40%), Gaps = 44/165 (26%)
Query: 508 AEPTSARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNR 564
+EPT +S +V T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 565 ATL---FNVVGQP-----LRFPES----------------------PSVSFAARDLIRGL 594
L F ++G P LR ES P V+ DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 595 LVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPPDVPKQKP 639
LV +P R+ A E HP+ Q+ + P D P+ +P
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQTYH-------DPNDEPEGEP 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
E +IL+ H + T++ D F +++ DLH + Q S+ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQ 115
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+++ + L A++ LH +I+RDLKP N+L+ + + + DF L+
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 571 VGQPLR 576
+G P R
Sbjct: 251 LGTPTR 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 91
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 251
Query: 571 VGQPLR 576
+G P R
Sbjct: 252 LGTPTR 257
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 75
Query: 339 PFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF-------YVAE 389
+ + + L+ME+ P G L Y +H R Y ++
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQYTSQ 127
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +EYL I+RDL N+LV + + + DF L+
Sbjct: 128 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y +H R
Sbjct: 71 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQ 118
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+RDL N+LV + + + DF L+
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 333 LQSLDHPFLPTLY---THFETDKFSCLVMEF-CPGGDLHALRQRQPGKYFSEHAARFYVA 388
L++ +HP + L+ T TD+ + L + F DL + P + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L++LH +++RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 21/124 (16%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN---RATLFNVVGQ 573
S V T Y APE++ + + VD W+ G E+ K F+G+ + + +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 574 PLR--FPES---PSVSFAAR-------------DLIRGLLVKEPQHRLAYRRGATEVKRH 615
P +P P +F ++ +L + LL+K A R A H
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297
Query: 616 PFFQ 619
P+FQ
Sbjct: 298 PYFQ 301
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 76
Query: 339 PFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF-------YVAE 389
+ + + L+ME+ P G L Y +H R Y ++
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQYTSQ 128
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +EYL I+RDL N+LV + + + DF L+
Sbjct: 129 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH- 338
+F++ K++GCG+ G + L + + T + A+K+ E + L
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYRFYKQLGSG 64
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
+P +Y K++ +V+E DL L R FS +++ +EY
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRMEY 120
Query: 397 LHMLGIIYRDLKPENVLVREDGH-----IMLSDFDLS 428
+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 121 VHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 333 LQSLDHPFLPTLY---THFETDKFSCLVMEF-CPGGDLHALRQRQPGKYFSEHAARFYVA 388
L++ +HP + L+ T TD+ + L + F DL + P + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++L L++LH +++RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 25/133 (18%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN---RATLFNVVGQ 573
S V T Y APE++ + + VD W+ G E+ K F+G+ + + +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 574 PLR--FPES---PSVSFAAR-------------DLIRGLLVKEPQHRLAYRRGATEVKRH 615
P +P P +F ++ +L + LL+K A R A H
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297
Query: 616 PFFQSVNWALIRC 628
P+FQ + RC
Sbjct: 298 PYFQDLE----RC 306
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y +H R
Sbjct: 75 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQ 122
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+RDL N+LV + + + DF L+
Sbjct: 123 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 571 VGQPLR 576
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 339 PFLPTL--YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF-------YVAE 389
+ + + L+ME+ P G L Y +H R Y ++
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQYTSQ 140
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +EYL I+RDL N+LV + + + DF L+
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 571 VGQPLR 576
+G P R
Sbjct: 239 LGTPTR 244
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 571 VGQPLR 576
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 122 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 423 SDFDLS 428
DF L+
Sbjct: 179 LDFGLA 184
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
SL L++ KLL+ +G G G+VY L + A+KV E+ I +
Sbjct: 9 SLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFI------NEKNIYR 60
Query: 335 S--LDHPFLPTLYTHFETDKFS-----CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
++H + E LVME+ P G L KY S H + +
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLX--------KYLSLHTSDWVS 112
Query: 388 A-----EVLLALEYLHML---------GIIYRDLKPENVLVREDGHIMLSDFDLSLR 430
+ V L YLH I +RDL NVLV+ DG ++SDF LS+R
Sbjct: 113 SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 108 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 164
Query: 423 SDFDLS 428
DF L+
Sbjct: 165 LDFGLA 170
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 228
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 229 QLKLILRLVGTPGAELLKKISSESARNYIQSL 260
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y +H R
Sbjct: 71 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQ 118
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+RDL N+LV + + + DF L+
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K LV E+ D L Q ++ RFY+ E+L AL+Y H GI++RD+KP N
Sbjct: 108 KTPALVFEYINNTDFKQLYQ-----ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHN 162
Query: 412 VLV 414
V++
Sbjct: 163 VMI 165
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 571 VGQPLR 576
+G P R
Sbjct: 239 LGTPTR 244
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 571 VGQPLR 576
+G P R
Sbjct: 239 LGTPTR 244
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 115 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 423 SDFDLS 428
DF L+
Sbjct: 172 LDFGLA 177
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQP 574
L +VG P
Sbjct: 231 QLKLILRLVGTP 242
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 109 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 165
Query: 423 SDFDLS 428
DF L+
Sbjct: 166 LDFGLA 171
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 229
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 230 QLKLILRLVGTPGAELLKKISSESARNYIQSL 261
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 112 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 423 SDFDLS 428
DF L+
Sbjct: 169 LDFGLA 174
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 122 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 423 SDFDLS 428
DF L+
Sbjct: 179 LDFGLA 184
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 112 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 423 SDFDLS 428
DF L+
Sbjct: 169 LDFGLA 174
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 117 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 423 SDFDLS 428
DF L+
Sbjct: 174 LDFGLA 179
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 122 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 423 SDFDLS 428
DF L+
Sbjct: 179 LDFGLA 184
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 133 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 423 SDFDLS 428
DF L+
Sbjct: 190 LDFGLA 195
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 79
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 239
Query: 571 VGQPLR 576
+G P R
Sbjct: 240 LGTPTR 245
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 112 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 423 SDFDLS 428
DF L+
Sbjct: 169 LDFGLA 174
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G V+ ++L+ + KV+ E +I++ + HP + L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK--------NRELQIMRIVKHPNVVDL 97
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + F LV+E+ P A R K + Y+ ++L +L Y+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 398 HMLGIIYRDLKPENVLVR-EDGHIMLSDF 425
H +GI +RD+KP+N+L+ G + L DF
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDF 186
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 32/149 (21%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + + +D W+ G + EL+ G+ F G + V
Sbjct: 198 NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV 257
Query: 571 VGQPLR--------------FPE----------SPSVSFAARDLIRGLLVKEPQHRLAYR 606
+G P R FP+ P A DLI LL P RL
Sbjct: 258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT-- 315
Query: 607 RGATEVKRHPFFQSVNWALIRCASPPDVP 635
A E HPFF + R + ++P
Sbjct: 316 --AIEALCHPFFDELRTGEARMPNGRELP 342
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 271 SHMGSLGL---------NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
HM + GL +L +LG G G V++ GT T A+K +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA 59
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++++ L H L LY + +VME+ G L + + GKY
Sbjct: 60 FL----QEAQVMKKLRHEKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++ + Y+ + ++RDL+ N+LV E+ ++DF L+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 599 PQHR 602
P+ R
Sbjct: 256 PEER 259
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 107 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 423 SDFDLS 428
DF L+
Sbjct: 164 LDFGLA 169
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 120 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 176
Query: 423 SDFDLS 428
DF L+
Sbjct: 177 LDFGLA 182
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 240
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 241 QLKLILRLVGTPGAELLKKISSESARNYIQSL 272
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 121 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 177
Query: 423 SDFDLS 428
DF L+
Sbjct: 178 LDFGLA 183
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 82
Query: 345 YTHF------ETDKFSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 242
Query: 571 VGQPLR 576
+G P R
Sbjct: 243 LGTPTR 248
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 129 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 423 SDFDLS 428
DF L+
Sbjct: 186 LDFGLA 191
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T FV T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 130 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 423 SDFDLS 428
DF L+
Sbjct: 187 LDFGLA 192
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 45/155 (29%)
Query: 518 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGA-------------GNR 564
+V T Y APE+I G G+ VD W+ G + EL+ G F+G G
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 242
Query: 565 ATLFNVVGQPL------RFPESPSVSF---------------------AARDLIRGLLVK 597
+ F QP P P ++F ARDL+ +LV
Sbjct: 243 SAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 302
Query: 598 EPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPP 632
+P R++ E RHP+ +V + +PP
Sbjct: 303 DPDKRIS----VDEALRHPYI-TVWYDPAEAEAPP 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 171
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 275 SLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
S+G N F++ K++GCG+ G + L + + T + A+K+ E +
Sbjct: 1 SMGPN-FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPIKSRAPQLHLEYRFYK 54
Query: 335 SLDHP-FLPTLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVAEVL 391
L +P +Y K++ +V+E DL L R F+ +++
Sbjct: 55 QLSATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLI 110
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDG-----HIMLSDFDLS 428
+EY+H +IYRD+KPEN LV G I + DF L+
Sbjct: 111 TRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 107 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 423 SDFDLS 428
DF L+
Sbjct: 164 LDFGLA 169
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 116 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 423 SDFDLS 428
DF L+
Sbjct: 173 LDFGLA 178
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 71/193 (36%), Gaps = 55/193 (28%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV-REDGHIMLSDFDLSLRCAVCPT 436
S R Y+ + AL+ +H GI++RD+KP N L R L DF L+
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA-------- 165
Query: 437 LVKSSNTSLESKNL--SYCVQPACIEPTCVIQPDCIQPACFAPRFMXXXXXXXXXXXXXN 494
+ +T +E S Q C + C I C + R
Sbjct: 166 -QGTHDTKIELLKFVQSEAQQERCSQNKCSI--------CLSRR---------------- 200
Query: 495 EMHNQVSPLPELIAEPTSARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLF 553
QV+P GT + APE++ K +A+D W+ G+ LL
Sbjct: 201 ---QQVAPR---------------AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 554 GKTPFKGAGNRAT 566
G+ PF A + T
Sbjct: 243 GRYPFYKASDDLT 255
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 106 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 423 SDFDLS 428
DF L+
Sbjct: 163 LDFGLA 168
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFGLA 172
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T FV T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 130 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 423 SDFDLS 428
DF L+
Sbjct: 187 LDFGLA 192
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 136
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 273 MGSLGLN-HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE 331
MG L + +F++ K++GCG+ G + L + + T + A+K+ E
Sbjct: 2 MGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYR 56
Query: 332 ILQSLDH-PFLPTLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVA 388
+ L +P +Y K++ +V+E DL L R FS
Sbjct: 57 FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAI 112
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGH-----IMLSDFDLS 428
+++ +EY+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 106 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 423 SDFDLS 428
DF L+
Sbjct: 163 LDFGLA 168
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 129 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 423 SDFDLS 428
DF L+
Sbjct: 186 LDFGLA 191
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 10 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 64
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 65 LVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLA 151
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 599 PQHR 602
P+ R
Sbjct: 246 PEER 249
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 106 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 423 SDFDLS 428
DF L+
Sbjct: 163 LDFGLA 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T FV T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K LV E+ D L Q ++ RFY+ E+L AL+Y H GI++RD+KP N
Sbjct: 113 KTPALVFEYINNTDFKQLYQ-----ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHN 167
Query: 412 VLV 414
V++
Sbjct: 168 VMI 170
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 240
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 599 PQHR 602
P+ R
Sbjct: 422 PEER 425
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 380 EHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPT 436
EH R+++ ++L L+Y+H +I+RDLKP N+LV E+ + + DF ++ P
Sbjct: 159 EHV-RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 115 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 423 SDFDLS 428
DF L+
Sbjct: 172 LDFGLA 177
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 240
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 599 PQHR 602
P+ R
Sbjct: 422 PEER 425
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 130 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 423 SDFDLS 428
DF L+
Sbjct: 187 LDFGLA 192
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 191 LARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 283 LLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLP 342
L R+G G G+VY + G +KV+D + E +L+ H +
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAF----RNEVAVLRKTRHVNI- 94
Query: 343 TLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGI 402
L+ + T +V ++C G L+ Q K F + ++YLH I
Sbjct: 95 LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNI 153
Query: 403 IYRDLKPENVLVREDGHIMLSDFDLS 428
I+RD+K N+ + E + + DF L+
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLA 179
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 520 GTHEYLAPEIIKGEGHGS---AVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D +++GI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255
Query: 577 FPE 579
P+
Sbjct: 256 SPD 258
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 133 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 423 SDFDLS 428
DF L+
Sbjct: 190 LDFGLA 195
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 271 SHMGSLGL---------NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
HM + GL +L +LG G G V++ GT T A+K +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA 59
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++++ L H L LY + +V+E+ G L + + GKY
Sbjct: 60 FL----QEAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++ + Y+ + ++RDL+ N+LV E+ ++DF L+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 599 PQHR 602
P+ R
Sbjct: 256 PEER 259
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 273 MGSLGLN-HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTERE 331
MG L + +F++ K++GCG+ G + L + + T + A+K+ E
Sbjct: 23 MGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYR 77
Query: 332 ILQSLDH-PFLPTLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVA 388
+ L +P +Y K++ +V+E DL L R FS
Sbjct: 78 FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAI 133
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGH-----IMLSDFDLS 428
+++ +EY+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 134 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL + P + + + L L++LH I++RDLKPEN+LV G + L+D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 425 FDL----SLRCAVCPTLV 438
F L S + A+ P +V
Sbjct: 156 FGLARIYSYQMALFPVVV 173
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---AGNRATLFNVVGQP 574
V T Y APE++ + + VD W+ G E+ K F G A +F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 135
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 271 SHMGSLGL---------NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
HM + GL +L +LG G G V++ GT T A+K +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA 59
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++++ L H L LY + +V+E+ G L + + GKY
Sbjct: 60 FL----QEAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++ + Y+ + ++RDL+ N+LV E+ ++DF L+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 599 PQHR 602
P+ R
Sbjct: 256 PEER 259
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 133
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 116 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 423 SDFDLS 428
DF L+
Sbjct: 173 LDFGLA 178
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 116 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 423 SDFDLS 428
DF L+
Sbjct: 173 LDFGLA 178
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + +M+ E ++ S+
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 166
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 2/163 (1%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMDXXXXXXXXXXXX 325
+AV L + K+ + +G G+ G V L + K A+ +
Sbjct: 31 RAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD 90
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
E I+ DHP + L K +V+EF G L A ++ G+ F+
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVG 149
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + + YL +G ++RDL N+LV + +SDF LS
Sbjct: 150 MLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ APE I+ SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 268
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 380 EHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPT 436
EH R+++ ++L L+Y+H +I+RDLKP N+LV E+ + + DF ++ P
Sbjct: 158 EHV-RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
K +G G G VY ++L + A+K + E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 345 YTHFETDK------FSCLVMEFCPGGDLHALRQRQPGKY-FSEHAARFYVAEVLLALEYL 397
F + + LV+++ P R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 398 HMLGIIYRDLKPENVLVREDGHIM-LSDF 425
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPF---KGAGNRATLFNV 570
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 571 VGQPLR 576
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
DF L+
Sbjct: 167 LDFYLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL + P + + + L L++LH I++RDLKPEN+LV G + L+D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 425 FDL----SLRCAVCPTLV 438
F L S + A+ P +V
Sbjct: 156 FGLARIYSYQMALDPVVV 173
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---AGNRATLFNVVGQP 574
V T Y APE++ + + VD W+ G E+ K F G A +F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 351 DKFSCLVMEFCPGGDLHALRQR--QPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLK 408
+K+ ++ME+ P LH + + + G+ + Y+ ++ A+ ++H LGI +RD+K
Sbjct: 110 NKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 409 PENVLVR-EDGHIMLSDF 425
P+N+LV +D + L DF
Sbjct: 169 PQNLLVNSKDNTLKLCDF 186
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 38/138 (27%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
S S++ + + Y APE++ G + ++D W+ G EL+ GK F G + L +
Sbjct: 195 SEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRI 254
Query: 571 V---GQP--------------LRFPE-------------SPSVSFAARDLIRGLLVKEPQ 600
+ G P +RFP +PS+ A DL+ +L EP
Sbjct: 255 IQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL---AIDLLEQILRYEPD 311
Query: 601 HRLAYRRGATEVKRHPFF 618
R+ E HPFF
Sbjct: 312 LRI----NPYEAMAHPFF 325
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 13 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 67
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 68 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLA 154
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 599 PQHR 602
P+ R
Sbjct: 249 PEER 252
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 240
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 599 PQHR 602
P+ R
Sbjct: 422 PEER 425
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 5/153 (3%)
Query: 278 LNHFKLL--KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
LNH L+ +++G G+ G V+ L T A+K E IL+
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK--SCRETLPPDLKAKFLQEARILKQ 168
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
HP + L + +VME GGD R G V + +E
Sbjct: 169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGME 227
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL I+RDL N LV E + +SDF +S
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRAT 566
++ APE + + S D W+FGI L+E G +P+ N+ T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF--LP 342
K++GCG+ G + L + + T + A+K+ E + L LP
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVAIKL-----EPIKSRAPQLHLEYRFYKQLGSAGEGLP 60
Query: 343 TLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
+Y K++ +V+E DL L R F+ ++L +EY+H
Sbjct: 61 QVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLLSRMEYVHSK 116
Query: 401 GIIYRDLKPENVLVREDGH-----IMLSDFDLS 428
+IYRD+KPEN L+ G+ I + DF L+
Sbjct: 117 NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 287 LGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLYT 346
+G G G VYL+ T+ + A+K ++ + E IL L ++ LY
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIRLYD 92
Query: 347 HFETD---KFSCL--VMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLG 401
D KF L V+E DL L + + +E + + +LL ++H G
Sbjct: 93 LIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESG 149
Query: 402 IIYRDLKPENVLVREDGHIMLSDFDLS 428
II+RDLKP N L+ +D + + DF L+
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 5/153 (3%)
Query: 278 LNHFKLL--KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
LNH L+ +++G G+ G V+ L T A+K E IL+
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK--SCRETLPPDLKAKFLQEARILKQ 168
Query: 336 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
HP + L + +VME GGD R G V + +E
Sbjct: 169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTF-LRTEGARLRVKTLLQMVGDAAAGME 227
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL I+RDL N LV E + +SDF +S
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRAT 566
++ APE + + S D W+FGI L+E G +P+ N+ T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTFED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E+ G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVLLAL-------EYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ L +YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 LS 428
LS
Sbjct: 193 LS 194
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 271 SHMGSLGL---------NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
HM + GL +L +LG G G V++ GT T A+K +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA 59
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++++ L H L LY + +V E+ G L + + GKY
Sbjct: 60 FLQ----EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++ + Y+ + ++RDL+ N+LV E+ ++DF L+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 599 PQHR 602
P+ R
Sbjct: 256 PEER 259
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 515 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG-- 572
S S GT E++APE+++ E D ++FG+ L+EL + P+ G N A + VG
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFK 254
Query: 573 -QPLRFPESPSVSFAARDLIRGLLVKEPQHRLAY 605
+ L P + + AA +I G EP R ++
Sbjct: 255 CKRLEIPRNLNPQVAA--IIEGCWTNEPWKRPSF 286
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+++G G G+V+ +E G+ A+K++ + E I++ L HP +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDV--AVKILMEQDFHAERVNEFLR-EVAIMKRLRHPNIVLF 99
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLG-- 401
+V E+ G L+ L + + + R +A +V + YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 402 IIYRDLKPENVLVREDGHIMLSDFDLS 428
I++R+LK N+LV + + + DF LS
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 270 RSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMK--VMDXXXXXXXXXXXXXQ 327
+S + +L N + K++G G G V+ L+ K+ A+K ++ +
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 328 TERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH--ALRQRQPGKYFSEHAA 383
+RE I+ +L+HP + LY +VMEF P GDL+ L + P K+
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW---SVK 124
Query: 384 RFYVAEVLLALEYLHMLG--IIYRDLKPENVLVR---EDGHI--MLSDFDLS 428
+ ++ L +EY+ I++RDL+ N+ ++ E+ + ++DF LS
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 517 SFVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 558
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 16/170 (9%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMDXXXXXXXXXXXX 325
Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 4 QTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
E I+ DHP + L K +V E+ G L + + +H A+F
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--------FLRKHDAQF 115
Query: 386 YVAEVL-------LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V +++ ++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 241
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 270 RSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMK--VMDXXXXXXXXXXXXXQ 327
+S + +L N + K++G G G V+ L+ K+ A+K ++ +
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 328 TERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH--ALRQRQPGKYFSEHAA 383
+RE I+ +L+HP + LY +VMEF P GDL+ L + P K+
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW---SVK 124
Query: 384 RFYVAEVLLALEYLHMLG--IIYRDLKPENVLVR 415
+ ++ L +EY+ I++RDL+ N+ ++
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQ 158
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 517 SFVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 558
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++ +F + ++L L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 566 TL---FNVVGQP 574
L +VG P
Sbjct: 227 QLKLILRLVGTP 238
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 187 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEAFLQ----EAQVMKKLRHEK 241
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 242 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGLG 328
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 599 PQHR 602
P+ R
Sbjct: 423 PEER 426
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 254
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
F + VS + LIR L P R + E++ HP+ Q V
Sbjct: 255 FFRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
D+ L+
Sbjct: 167 LDYGLA 172
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 254
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
F + VS + LIR L P R + E++ HP+ Q V
Sbjct: 255 FFRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 16/170 (9%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMDXXXXXXXXXXXX 325
Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 21 QTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 80
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
E I+ DHP + L K +V E+ G L + + +H A+F
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--------FLRKHDAQF 132
Query: 386 YVAEVLLAL-------EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V +++ L +YL +G ++RDL N+L+ + +SDF LS
Sbjct: 133 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 258
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTYED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E+ G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVLLAL-------EYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ L +YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 LS 428
LS
Sbjct: 193 LS 194
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 63
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 64 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLA 150
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 599 PQHR 602
P+ R
Sbjct: 245 PEER 248
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 271 SHMGSLGL---------NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
HM + GL +L +LG G G V++ GT T A+K +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA 59
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++++ L H L LY + +V E+ G L + + GKY
Sbjct: 60 FL----QEAQVMKKLRHEKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++ + Y+ + ++RDL+ N+LV E+ ++DF L+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 599 PQHR 602
P+ R
Sbjct: 256 PEER 259
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 253
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
F + VS + LIR L P R + E++ HP+ Q V
Sbjct: 254 FFRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTYED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E+ G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVL-------LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ ++YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 LS 428
LS
Sbjct: 193 LS 194
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 32/44 (72%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L+ +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G + E++ G F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 571 VGQ 573
+ Q
Sbjct: 238 IEQ 240
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 11 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLA 152
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 599 PQHR 602
P+ R
Sbjct: 247 PEER 250
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 270 RSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMK--VMDXXXXXXXXXXXXXQ 327
+S + +L N + K++G G G V+ L+ K+ A+K ++ +
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 328 TERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH--ALRQRQPGKYFSEHAA 383
+RE I+ +L+HP + LY +VMEF P GDL+ L + P K+
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW---SVK 124
Query: 384 RFYVAEVLLALEYLHMLG--IIYRDLKPENVLVR 415
+ ++ L +EY+ I++RDL+ N+ ++
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQ 158
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 517 SFVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 558
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 23 PHTYED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 78
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E+ G L +
Sbjct: 79 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS----- 133
Query: 374 PGKYFSEHAARFYVAEVLLAL-------EYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ L +YL +G ++RDL N+L+ + +SDF
Sbjct: 134 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 190
Query: 427 LS 428
LS
Sbjct: 191 LS 192
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 268
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTFED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E+ G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVLLAL-------EYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ L +YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 LS 428
LS
Sbjct: 193 LS 194
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 32/44 (72%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L+ +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G+ + E++ G F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 571 VGQ 573
+ Q
Sbjct: 238 IEQ 240
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 71
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 599 PQHR 602
P+ R
Sbjct: 253 PEER 256
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 66/165 (40%), Gaps = 44/165 (26%)
Query: 508 AEPTSARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNR 564
+EPT +S V T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 565 ATL---FNVVGQP-----LRFPES----------------------PSVSFAARDLIRGL 594
L F ++G P LR ES P V+ DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 595 LVKEPQHRLAYRRGATEVKRHPFFQSVNWALIRCASPPDVPKQKP 639
LV +P R+ A E HP+ Q+ + P D P+ +P
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQTYH-------DPNDEPEGEP 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
E +IL+ H + T++ D F +++ DLH + Q S+ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQ 115
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+++ + L A++ LH +I+RDLKP N+L+ + + + DF L+
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 280 HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKV-MDXXXXXXXXXXXXXQTEREILQSLDH 338
H K L++LG G+ GSV + + + V + + E EIL+SL H
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 71
Query: 339 PFLPTLYTHFETDKFSC------LVMEFCPGGDLHALRQRQPGKYFSEHAARF------- 385
+ ++ +S L+ME+ P G L Y +H R
Sbjct: 72 DNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLR--------DYLQKHKERIDHIKLLQ 119
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +++ +EYL I+R+L N+LV + + + DF L+
Sbjct: 120 YTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTFED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E+ G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVLLAL-------EYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ L +YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 LS 428
LS
Sbjct: 193 LS 194
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 377 YFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
Y +E + + +L+ ++Y+H GI++RDLKP N LV +D + + DF L+
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 32/44 (72%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L+ +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G+ + E++ G F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 571 VGQ 573
+ Q
Sbjct: 238 IEQ 240
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L +LG G G V++ GT T A+K + E ++++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEK 71
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + + GKY A++ + Y+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
++RDL+ N+LV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 599 PQHR 602
P+ R
Sbjct: 253 PEER 256
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+L+KRLG G G V++ G T A+K + E +I++ L H
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWNGN-TKVAIKTLKPGTMSPESFL----EEAQIMKKLKHDK 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY + +V E+ G L + G+ A+V + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV ++DF L+
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLA 152
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL+ G+ P+ G NR L V + R P + +L+ K+
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVL-EQVERGYRMPCPQDCPISLHELMIHCWKKD 246
Query: 599 PQHR 602
P+ R
Sbjct: 247 PEER 250
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDF 425
L +++RDL NVLV+ H+ ++DF
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 254
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
F + VS + LIR L P R + E++ HP+ Q V
Sbjct: 255 FFRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 253
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
F + VS + LIR L P R + E++ HP+ Q V
Sbjct: 254 FFRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 254
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
F + VS + LIR L P R + E++ HP+ Q V
Sbjct: 255 FFRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQT---EREILQSLD 337
++L LG G G+V+ + + A+KV+ T E +L +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 338 ----HPFLPTLYTHFETDKFSCLVMEF-CPGGDLHA-LRQRQPGKYFSEHAARFYVAEVL 391
HP + L FET + LV+E P DL + ++ P E +R + +V+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVV 149
Query: 392 LALEYLHMLGIIYRDLKPENVLV 414
A+++ H G+++RD+K EN+L+
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILI 172
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 13/105 (12%)
Query: 517 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I + + H W+ GI LY+++ G PF+ ++ L
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAEL 250
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQS 620
FP S A LIR L +P R + E+ P+ Q+
Sbjct: 251 HFPAHVSPDCCA--LIRRCLAPKPSSRPSLE----EILLDPWMQT 289
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 253
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
F + VS + LIR L P R + E++ HP+ Q V
Sbjct: 254 FFRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDF 425
L +++RDL NVLV+ H+ ++DF
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 136
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDF 425
L +++RDL NVLV+ H+ ++DF
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 271 SHMGSLGL---------NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
HM + GL +L +LG G G V++ GT T A+K +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA 59
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++++ + H L LY + +V E+ G L + + GKY
Sbjct: 60 FLQ----EAQVMKKIRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++ + Y+ + ++RDL+ N+LV E+ ++DF L+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 599 PQHR 602
P+ R
Sbjct: 256 PEER 259
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR-FYVAEVL 391
++ DHP + L T+ ++ME C G+L + Q + KY + A+ Y ++
Sbjct: 68 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLS 124
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 238
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 239 NCPPTLYSLMTKCWAYDPSRR 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 15/167 (8%)
Query: 271 SHMGSLGL---------NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
HM + GL +L +LG G G V++ GT T A+K +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA 59
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++++ L H L LY + +V E+ G L + + GKY
Sbjct: 60 FLQ----EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++ + Y+ + ++RDL N+LV E+ ++DF L+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLA 161
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 599 PQHR 602
P+ R
Sbjct: 256 PEER 259
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 270 RSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTE 329
+ HM + H+ +++LG G V L E + +A+K + Q E
Sbjct: 20 QGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQQDREEAQRE 76
Query: 330 REILQSLDHPFLPTLYTHFETDKFS----CLVMEFCPGGDL--HALRQRQPGKYFSEHAA 383
++ + +HP + L + ++ + L++ F G L R + G + +E
Sbjct: 77 ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI 136
Query: 384 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 425
+ + + LE +H G +RDLKP N+L+ ++G +L D
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 521 THEYLAPEIIKGEGH---GSAVDWWTFGIFLYELLFGKTPFKGAGNRA-TLFNVVGQPLR 576
T Y APE+ + H D W+ G LY ++FG+ P+ + ++ V L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHR 602
P+SP S A L+ ++ +P R
Sbjct: 266 IPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR-FYVAEVL 391
++ DHP + L T+ ++ME C G+L + Q + KY + A+ Y ++
Sbjct: 93 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLS 149
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 263
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 264 NCPPTLYSLMTKCWAYDPSRR 284
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 510 PTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA-TLF 568
P AR VGT Y++PE I G + VD ++ G+ L+ELL+ PF R TL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238
Query: 569 NVVGQPLRFP 578
+V + L+FP
Sbjct: 239 DV--RNLKFP 246
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
A+E+LH G+++RDLKP N+ D + + DF L
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR-FYVAEVL 391
++ DHP + L T+ ++ME C G+L + Q + KY + A+ Y ++
Sbjct: 67 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLS 123
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 237
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 238 NCPPTLYSLMTKCWAYDPSRR 258
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR-FYVAEVL 391
++ DHP + L T+ ++ME C G+L + Q + KY + A+ Y ++
Sbjct: 70 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLS 126
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 240
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 241 NCPPTLYSLMTKCWAYDPSRR 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 271 SHMGSLGL---------NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXX 321
HM + GL +L +LG G G V++ GT T A+K +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA 59
Query: 322 XXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEH 381
E ++++ L H L LY + +V E+ G L + + GKY
Sbjct: 60 FLQ----EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 382 AARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
A++ + Y+ + ++RDL+ N+LV E+ ++DF L+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 540 DWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKE 598
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 599 PQHR 602
P+ R
Sbjct: 256 PEER 259
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 512 SARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKG---AGNRATL 567
S +++++ + Y APE+I G H +AVD W+ G E++ G+ F+G AG +
Sbjct: 185 SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI 244
Query: 568 FNVVGQPLR 576
V+G P R
Sbjct: 245 VRVLGCPSR 253
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 31/167 (18%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL- 336
++ F++ + G G G+V L + T A+K + E +I+Q L
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-------IQDPRFRNRELQIMQDLA 74
Query: 337 --DHPFLPTLYTHFET-------DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAA---- 383
HP + L ++F T D + +VME+ P LH R Y+ A
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LH----RCCRNYYRRQVAPPPI 129
Query: 384 --RFYVAEVLLALEYLHM--LGIIYRDLKPENVLVRE-DGHIMLSDF 425
+ ++ +++ ++ LH+ + + +RD+KP NVLV E DG + L DF
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ Q+ ++ + V
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELV 476
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 522
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 523 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 553
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 576
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR-FYVAEVL 391
++ DHP + L T+ ++ME C G+L + Q + KY + A+ Y ++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLS 121
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 235
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G + E++ G F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 571 VGQ 573
+ Q
Sbjct: 238 IEQ 240
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 412 VLV 414
V++
Sbjct: 156 VMI 158
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSEL---MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G +LL++LG G G V E G A+K + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
+ SLDH L LY T +V E P G L ++ G + +R Y +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 126
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+ YL I+RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ Q+ ++ + V
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELV 475
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 521
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 552
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR-FYVAEVL 391
++ DHP + L T+ ++ME C G+L + Q + KY + A+ Y ++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLS 121
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 235
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 103 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 157
Query: 412 VLV 414
V++
Sbjct: 158 VMI 160
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR-FYVAEVL 391
++ DHP + L T+ ++ME C G+L + Q + KY + A+ Y ++
Sbjct: 62 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLS 118
Query: 392 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 232
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 233 NCPPTLYSLMTKCWAYDPSRR 253
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G + E++ G F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 571 VGQ 573
+ Q
Sbjct: 238 IEQ 240
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 412 VLV 414
V++
Sbjct: 156 VMI 158
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPL 575
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 221
Query: 576 RFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
F + VS + LIR L P R + E++ HP+ Q V
Sbjct: 222 FFRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 412 VLV 414
V++
Sbjct: 156 VMI 158
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTFED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E+ G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVLLAL-------EYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ L +YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 LS 428
L+
Sbjct: 193 LA 194
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 2/163 (1%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMDXXXXXXXXXXXX 325
QAVR + + K+ K +G G+ G V L + K + +
Sbjct: 17 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 76
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
+E I+ DHP + L K ++ E+ G L A ++ G+ F+
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVG 135
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++YL + ++RDL N+LV + +SDF +S
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESPS 582
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLPPPMD 258
Query: 583 VSFAARDLIRGLLVKEPQHR 602
A L+ KE R
Sbjct: 259 CPIALHQLMLDCWQKERSDR 278
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 2/163 (1%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMDXXXXXXXXXXXX 325
QAVR + + K+ K +G G+ G V L + K + +
Sbjct: 2 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 61
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
+E I+ DHP + L K ++ E+ G L A ++ G+ F+
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVG 120
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++YL + ++RDL N+LV + +SDF +S
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESPS 582
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLPPPMD 243
Query: 583 VSFAARDLIRGLLVKEPQHR 602
A L+ KE R
Sbjct: 244 CPIALHQLMLDCWQKERSDR 263
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 122 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 176
Query: 412 VLV 414
V++
Sbjct: 177 VMI 179
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 102 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 156
Query: 412 VLV 414
V++
Sbjct: 157 VMI 159
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 412 VLV 414
V++
Sbjct: 156 VMI 158
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 412 VLV 414
V++
Sbjct: 156 VMI 158
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
+E I+++LDHP + L E + + ++ME P G+L +R Y
Sbjct: 74 SEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYS 131
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++ A+ YL + ++RD+ N+LV + L DF LS
Sbjct: 132 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPE 579
++++PE I +A D W F + ++E+L FGK PF N+ + V+ + R P+
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPK 247
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 102 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 156
Query: 412 VLV 414
V++
Sbjct: 157 VMI 159
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 16 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 70
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 128
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLA 153
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 577 FPESPSV 583
P+ V
Sbjct: 230 SPDLSKV 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 73
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 131
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 577 FPESPSV 583
P+ V
Sbjct: 233 SPDLSKV 239
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 352 KFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPEN 411
K L+ E+ D L +++ R+Y+ E+L AL+Y H GI++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 412 VLV 414
V++
Sbjct: 156 VMI 158
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 135
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 520 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG---QPLR 576
GT E++APE+++ E D ++FG+ L+EL + P+ G N A + VG + L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFKCKRLE 259
Query: 577 FPESPSVSFAARDLIRGLLVKEPQHRLAY 605
P + + AA +I G EP R ++
Sbjct: 260 IPRNLNPQVAA--IIEGCWTNEPWKRPSF 286
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+++G G G+V+ +E G+ A+K++ + E I++ L HP +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDV--AVKILMEQDFHAERVNEFLR-EVAIMKRLRHPNIVLF 99
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLG-- 401
+V E+ G L+ L + + + R +A +V + YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 402 IIYRDLKPENVLVREDGHIMLSDFDLS 428
I++RDLK N+LV + + + DF LS
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVM-----------DXXXXXXXXXXXXXQTE 329
+ L+++LG G +V+L++ M TH AMK++ D E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 330 -----REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
IL+ LDH + H + +++ G +L AL + KY
Sbjct: 81 DSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIK----KYEHRGIPL 130
Query: 385 FYVAEV----LLALEYLHM-LGIIYRDLKPENVLV 414
YV ++ LL L+Y+H GII+ D+KPENVL+
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF---------KGAGNRATLFN 569
+ T EY +PE++ G G D W+ ++EL+ G F K + A +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 570 VVGQ----PLRFPESPSVSFAARDLIRGL 594
++G+ LR + F +R L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVM-----------DXXXXXXXXXXXXXQTE 329
+ L+++LG G +V+L++ M TH AMK++ D E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 330 -----REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
IL+ LDH + H + +++ G +L AL + KY
Sbjct: 81 DSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIK----KYEHRGIPL 130
Query: 385 FYVAEV----LLALEYLHM-LGIIYRDLKPENVLV 414
YV ++ LL L+Y+H GII+ D+KPENVL+
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF---------KGAGNRATLFN 569
+ T EY +PE++ G G D W+ ++EL+ G F K + A +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 570 VVGQ----PLRFPESPSVSFAARDLIRGL 594
++G+ LR + F +R L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
+E I+++LDHP + L E + + ++ME P G+L +R Y
Sbjct: 62 SEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYS 119
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++ A+ YL + ++RD+ N+LV + L DF LS
Sbjct: 120 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPE 579
++++PE I +A D W F + ++E+L FGK PF N+ + V+ + R P+
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPK 235
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 135
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 139
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 281 FKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
FK +K LG G G+VY + G K + + + E ++ S+D+
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLH 398
P + L T L+ + P G L + S++ + V ++ + YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 140
Query: 399 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+++RDL NVLV+ H+ ++DF L+
Sbjct: 141 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 135
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ + Q ++ + V
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 117
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 163
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 164 DENXYKAQTHGKWPVKWYAPECINYYKFSSK 194
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 520 GTHEYLAPEIIKGEG--HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLF-NVVGQPLR 576
GT+E++ PE E +G+ VD W+ GI LY + + PF + LF N+ + +
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 577 FP--------------ESPSVSFAAR---DLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
+P + S +F + D ++ L K P R+ + + +H +
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT----SEDALKHEWLA 327
Query: 620 SVNWALIRCASPPDVPKQK 638
N +R S K+K
Sbjct: 328 DTNIEDLREFSKELYKKRK 346
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 387 VAEVLLALEYLHM-LGIIYRDLKPENVLVREDGHIMLSDF 425
+ VL + Y+H I +RD+KP N+L+ ++G + LSDF
Sbjct: 157 IKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 44/148 (29%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G + E++ K F G V
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 275
Query: 571 VGQ-------------------------------PLRFPES--PSVS-------FAARDL 590
+ Q P FP+S P+ S ARDL
Sbjct: 276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335
Query: 591 IRGLLVKEPQHRLAYRRGATEVKRHPFF 618
+ +LV +P R++ + +HP+
Sbjct: 336 LSKMLVIDPAKRIS----VDDALQHPYI 359
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 73
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 131
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 577 FPESPSV 583
P+ V
Sbjct: 233 SPDLSKV 239
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 16/170 (9%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMDXXXXXXXXXXXX 325
Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 4 QTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
E I+ DHP + L K +V E G L + + +H A+F
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--------FLRKHDAQF 115
Query: 386 YVAEVL-------LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V +++ ++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 241
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K L G G+VY + G K + + + E ++ S+
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+M+ P G L + S++ + V ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 139
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 384 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++++ +LL L LH G+++RDL P N+L+ ++ I + DF+L+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 35/144 (24%)
Query: 509 EPTSARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGA---GNR 564
+ A +V Y APE++ + +G VD W+ G + E+ K F+G+
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 565 ATLFNVVGQP----------------LRFPES-----------PSVSFAARDLIRGLLVK 597
+ VVG P LR S P+ A DLI +L
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303
Query: 598 EPQHRLAYRRGATEVKRHPFFQSV 621
PQ R++ + RHP+F+S+
Sbjct: 304 NPQRRIS----TEQALRHPYFESL 323
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 384 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++++ +LL L LH G+++RDL P N+L+ ++ I + DF+L+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 35/144 (24%)
Query: 509 EPTSARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGA---GNR 564
+ A +V Y APE++ + +G VD W+ G + E+ K F+G+
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 565 ATLFNVVGQP----------------LRFPES-----------PSVSFAARDLIRGLLVK 597
+ VVG P LR S P+ A DLI +L
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303
Query: 598 EPQHRLAYRRGATEVKRHPFFQSV 621
PQ R++ + RHP+F+S+
Sbjct: 304 NPQRRIS----TEQALRHPYFESL 323
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 142
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
+E I+++LDHP + L E + + ++ME P G+L +R Y
Sbjct: 58 SEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYS 115
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++ A+ YL + ++RD+ N+LV + L DF LS
Sbjct: 116 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPE 579
++++PE I +A D W F + ++E+L FGK PF N+ + V+ + R P+
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPK 231
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 34 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 88
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 146
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA 171
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 577 FPESPSV 583
P+ V
Sbjct: 248 SPDLSKV 254
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 20/181 (11%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTFED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E+ G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVLLAL-------EYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ L +YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 L 427
L
Sbjct: 193 L 193
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
F L+
Sbjct: 167 LGFGLA 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 157
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 68
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 577 FPESPSV 583
P+ V
Sbjct: 228 SPDLSKV 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 68
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 577 FPESPSV 583
P+ V
Sbjct: 228 SPDLSKV 234
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTYED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVL-------LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ ++YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 LS 428
LS
Sbjct: 193 LS 194
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSEL---MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G +LL++LG G G V E G A+K + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
+ SLDH L LY T +V E P G L ++ G + +R Y +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 132
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+ YL I+RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 333 LQSLDHPFLPTLYTHF--ETDKFSCLVMEFCPGG-DLHALRQRQPGKYFSEHAARFYVAE 389
++++D PF T Y E D + C ME D + G+ E
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWIC--MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 161
Query: 390 VLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++ ALE+LH L +I+RD+KP NVL+ G + + DF +S
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSEL---MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G +LL++LG G G V E G A+K + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
+ SLDH L LY T +V E P G L ++ G + +R Y +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 132
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+ YL I+RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 96
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 154
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 577 FPESPSV 583
P+ V
Sbjct: 256 SPDLSKV 262
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 20/182 (10%)
Query: 255 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMD 313
PH D Q V L + + K +G G+ G V L + +K ++ +
Sbjct: 25 PHTFED----PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 314 XXXXXXXXXXXXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQ 373
E I+ DHP + L K +V E G L +
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS----- 135
Query: 374 PGKYFSEHAARFYVAEVL-------LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 426
+ +H A+F V +++ ++YL +G ++RDL N+L+ + +SDF
Sbjct: 136 ---FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFG 192
Query: 427 LS 428
LS
Sbjct: 193 LS 194
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 96
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 154
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 577 FPESPSV 583
P+ V
Sbjct: 256 SPDLSKV 262
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS + FV T Y APE+I G G+ VD W+ G + E++ G F G + V
Sbjct: 180 TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 239
Query: 571 VGQ 573
+ Q
Sbjct: 240 IEQ 242
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 126
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 41 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 95
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 153
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLA 178
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 577 FPESPSV 583
P+ V
Sbjct: 255 SPDLSKV 261
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ + Q ++ + V
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 111
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 157
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 158 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 188
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 211
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 22/159 (13%)
Query: 281 FKLLKRLGCGDIGSVY----LSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
K +K LG G G+VY + E K A+K+++ E I+ S+
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEF--MDEALIMASM 97
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF-------YVAE 389
DHP L L + LV + P G L +Y EH + +
Sbjct: 98 DHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL--------EYVHEHKDNIGSQLLLNWCVQ 148
Query: 390 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ + Q ++ + V
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 117
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 163
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 164 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 194
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
V T Y APE+I G G+ VD W+ G + E++ G F G + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ + Q ++ + V
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 113
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 159
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 160 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 190
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E ++L+ L H L L + K LV EF L L G + Y+
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLF 131
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+++ + + H II+RD+KPEN+LV + G + L DF +
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA 171
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 519 VGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVV 571
V T Y APE++ G+ +G AVD W G + E+ G+ F G + L++++
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ + Q ++ + V
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 123
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 169
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 200
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSEL---MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G +LL++LG G G V E G A+K + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
+ SLDH L LY T +V E P G L ++ G + +R Y +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 126
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+ YL I+RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSEL---MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G +LL++LG G G V E G A+K + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
+ SLDH L LY T +V E P G L ++ G + +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+ YL I+RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
D L+
Sbjct: 167 LDAGLA 172
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF--YVAEV 390
++ DHP + L T+ ++ME C G+L + Q + FS A Y ++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQL 120
Query: 391 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 235
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 183 TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 232
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 285 KRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTL 344
+R+G G G+VY + G A+K+++ + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI-LL 68
Query: 345 YTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA-EVLLALEYLHMLGII 403
+ + T +V ++C G L+ K+ E +A + ++YLH II
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 404 YRDLKPENVLVREDGHIMLSDFDLS 428
+RDLK N+ + ED + + DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 520 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLR 576
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 577 FPESPSV 583
P+ V
Sbjct: 228 SPDLSKV 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G + E++ G F G + V
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 238
Query: 571 VGQ 573
+ Q
Sbjct: 239 IEQ 241
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 503 LPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGA 561
L E ++PT S+ + APE I SA D W++GI ++E++ FG+ P+
Sbjct: 168 LEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
Query: 562 GNRATLFNVVGQPLRFPESP 581
N+ + N + Q R P P
Sbjct: 228 SNQ-DVINAIEQDYRLPPPP 246
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 2/163 (1%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMG-TKTHFAMKVMDXXXXXXXXXXXX 325
+AVR + +++ K+ + +G G+ G V L K + +
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
+E I+ +HP + L ++ EF G L + + G+ F+
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVG 122
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + + YL + ++RDL N+LV + +SDF LS
Sbjct: 123 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAEGMNY 129
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G + E++ G F G + +N
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNK 236
Query: 571 VGQPLRFPESPSVSFAARDLIRGLLVKEPQH 601
V + L P SP + +R + P++
Sbjct: 237 VIEQLGTP-SPEFMKKLQPTVRTYVENRPKY 266
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G + E++ G F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 571 VGQ 573
+ Q
Sbjct: 238 IEQ 240
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPG 227
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSEL---MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G +LL++LG G G V E G A+K + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
+ SLDH L LY T +V E P G L ++ G + +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+ YL I+RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ Q+ ++ + V
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELV 131
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 177
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 178 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 208
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 231
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNV 570
TS +V T Y APE+I G G+ VD W+ G + E++ G F G + +N
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNK 236
Query: 571 VGQPLRFPESPSVSFAARDLIRGLLVKEPQH 601
V + L P SP + +R + P++
Sbjct: 237 VIEQLGTP-SPEFMKKLQPTVRTYVENRPKY 266
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 177 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 226
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 519 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 227
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSEL---MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G +LL++LG G G V E G A+K + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL 392
+ SLDH L LY T +V E P G L ++ G + +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 393 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+ YL I+RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFP 578
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
D L+
Sbjct: 167 LDRGLA 172
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY+ G +++ V E +++ + HP L L
Sbjct: 39 KLGGGQYGEVYV----GVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +V E+ P G+L + + + + ++ A+EYL I+R
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 155 DLAARNCLVGENHVVKVADFGLS 177
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 511 TSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 560
TS +V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
+E I+ DHP + L + + +V E+ G L + G+ F+ +
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGML 157
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V + YL LG ++RDL NVLV + +SDF LS
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV 570
+ APE I SA D W+FG+ ++E+L +G+ P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
+E I+ DHP + L + + +V E+ G L + G+ F+ +
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGML 157
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
V + YL LG ++RDL NVLV + +SDF LS
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV 570
+ APE I SA D W+FG+ ++E+L +G+ P+ NR + +V
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM---GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
F L + LG G+ GSV ++L G+ A+K++ + E ++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR-EAACMKE 81
Query: 336 LDHPFLPTLYTHFETDK------FSCLVMEFCPGGDLHA--LRQRQPGKYFS---EHAAR 384
DHP + L + +++ F GDLHA L R F+ + R
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
F V ++ +EYL I+RDL N ++ ED + ++DF LS
Sbjct: 142 FMV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
++LA E + + D W FG+ ++E++ G+TP+ G N A ++N + R + P
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-AEIYNYLIGGNRLKQPP 262
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
DL+ +P+ R
Sbjct: 263 ECMEEVYDLMYQCWSADPKQR 283
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ + + Q ++ +F + ++L L+Y+H II+RDLKP N+ V ED + +
Sbjct: 110 GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 423 SDFDLS 428
D L+
Sbjct: 167 LDGGLA 172
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 507 IAEPTSARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 566 TL---FNVVGQPLRFPESPSVSFAARDLIRGL 594
L +VG P S +AR+ I+ L
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ + Q ++ + V
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 133
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 179
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
E ++Q LD+P++ + E + + LVME G L+ + Q ++ + V
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 133
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLES 447
+V + ++YL ++RDL NVL+ + +SDF LS +L +
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------KALRA 179
Query: 448 KNLSYCVQPACIEPTCVIQPDCIQPACFAPR 478
Y Q P P+CI F+ +
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF--YVAEV 390
++ DHP + L T+ ++ME C G+L + Q + FS A Y ++
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQL 500
Query: 391 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + + L DF LS
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQ 573
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 604
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 333 LQSLDHPFLPTLYTHF--ETDKFSCLVMEFCPGG-DLHALRQRQPGKYFSEHAARFYVAE 389
++++D PF T Y E D + C ME D + G+ E
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWIC--MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 117
Query: 390 VLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++ ALE+LH L +I+RD+KP NVL+ G + + DF +S
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 363 GGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 422
G DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + +
Sbjct: 129 GADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 423 SDFDLS 428
DF L+
Sbjct: 186 CDFGLA 191
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 332 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPG-----KYFSEHAARFY 386
+ +S DHP + Y TD+F + +E C +L L + + K E+
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 138
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVR-------------EDGHIMLSDFDL 427
+ ++ + +LH L II+RDLKP+N+LV E+ I++SDF L
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 377 YFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ +E + + +LL +++H GII+RDLKP N L+ +D + + DF L+
Sbjct: 127 FLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDF 425
L +++RDL NVLV+ H+ ++DF
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 332 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPG-----KYFSEHAARFY 386
+ +S DHP + Y TD+F + +E C +L L + + K E+
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 138
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVR-------------EDGHIMLSDFDL 427
+ ++ + +LH L II+RDLKP+N+LV E+ I++SDF L
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 22/170 (12%)
Query: 270 RSHMGSLGLNHFKLLKRLGCGDIGSVY----LSELMGTKTHFAMKVMDXXXXXXXXXXXX 325
++ + L K +K LG G G+VY + E K A+K+++
Sbjct: 6 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEF- 64
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
E I+ S+DHP L L + LV + P G L +Y EH
Sbjct: 65 -MDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL--------EYVHEHKDNI 114
Query: 386 -------YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 115 GSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 139
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDF 425
L +++RDL NVLV+ H+ ++DF
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 270
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 271 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 503 LPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGA 561
L E ++PT S+ + APE I SA D W++GI ++E++ FG+ P+
Sbjct: 166 LEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 225
Query: 562 GNRATLFNVVGQPLRFPESP 581
N+ + N + Q R P P
Sbjct: 226 SNQDVI-NAIEQDYRLPPPP 244
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 60/154 (38%), Gaps = 2/154 (1%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELMG-TKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
+ +++ K+ + +G G+ G V L K + + +E I+
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 70
Query: 335 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
+HP + L ++ EF G L + + G+ F+ + + +
Sbjct: 71 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGM 129
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL + ++RDL N+LV + +SDF LS
Sbjct: 130 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 242
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 243 ------RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K LG G G+VY + G K + + + E ++ S+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDF 425
L +++RDL NVLV+ H+ ++DF
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
++ ++ L ++G G G V+ + T A+K + + E +ILQ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 338 HPFLPTLYTHFETDKF---SC-----LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAE 389
H + L T C LV +FC DL L K+ R V +
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQ 132
Query: 390 VLL-ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+LL L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQR-----QPGKYFSEHAARFYVA 388
+S DHP + Y TD+F + +E C +L L + + K E+ +
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVR-------------EDGHIMLSDFDL 427
++ + +LH L II+RDLKP+N+LV E+ I++SDF L
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 270
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 271 ------RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQR-----QPGKYFSEHAARFYVA 388
+S DHP + Y TD+F + +E C +L L + + K E+ +
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVR-------------EDGHIMLSDFDL 427
++ + +LH L II+RDLKP+N+LV E+ I++SDF L
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 243
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 244 ------RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 243
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 244 ------RQRVSXECQHLIRWCLALRPXDRPTFE----EIQNHPWMQDV 281
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 275
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 276 ------RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 313
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 159 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 18 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +++EF G+L + + S + ++ A+EYL I+R
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 255
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 256 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 20 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +++EF G+L + + S + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 20 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +++EF G+L + + S + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF--YVAEV 390
++ DHP + L T+ ++ME C G+L + Q + FS A Y ++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQL 120
Query: 391 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + L DF LS
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I SA D W FG+ ++E+L G PF+G N + + R P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 235
Query: 582 SVSFAARDLIRGLLVKEPQHR 602
+ L+ +P R
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 278 LNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLD 337
++ ++ L ++G G G V+ + T A+K + + E +ILQ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 338 HPFLPTLYTHFETD-------KFSC-LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAE 389
H + L T K S LV +FC DL L K+ R V +
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQ 132
Query: 390 VLL-ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+LL L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 327 QTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
Q E + + +HP + F D +V F G L +E A +
Sbjct: 58 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI 117
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLS 423
+ VL AL+Y+H +G ++R +K ++L+ DG + LS
Sbjct: 118 LQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 154
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 242
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 243 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 243
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 244 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSEL--MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
K ++ LG G G V L G T + V + E EIL++L H
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 82
Query: 339 PFLPTLYTHFETDKFSC--LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
+ D + L+MEF P G L + K + + Y ++ ++Y
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDY 141
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L ++RDL NVLV + + + DF L+
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 270
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 271 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 327 QTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFY 386
Q E + + +HP + F D +V F G L +E A +
Sbjct: 74 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI 133
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLS 423
+ VL AL+Y+H +G ++R +K ++L+ DG + LS
Sbjct: 134 LQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 170
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 262
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 263 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 300
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 250
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 251 ------RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 288
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 375 GKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
G E Y+ + LLAL +LH G+++ D+KP N+ + G L DF L
Sbjct: 151 GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 333 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF--YVAEV 390
++ DHP + L T+ ++ME C G+L + Q + FS A Y ++
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQL 500
Query: 391 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
AL YL ++RD+ NVLV + L DF LS
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGAGNRATLFNVVGQ 573
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 604
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL-ALEYLHMLGIIYRDLKPENVLV 414
LV +FC DL L K+ R V ++LL L Y+H I++RD+K NVL+
Sbjct: 102 LVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 415 REDGHIMLSDFDLS 428
DG + L+DF L+
Sbjct: 159 TRDGVLKLADFGLA 172
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 18 KLGGGQFGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + S + ++ A+EYL I+R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 373 QPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR-EDGHIMLSDFDLS 428
+ G EHA R ++ ++L L+Y+H +++RDLKP N+ + ED + + DF L+
Sbjct: 113 EQGPLLEEHA-RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 33/127 (25%)
Query: 521 THEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGAG----------------- 562
T Y +P ++ + A+D W G E+L GKT F GA
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 563 -NRATLFNVVGQPLRFPES----------PSVSFAARDLIRGLLVKEPQHRLAYRRGATE 611
+R L +V+ +R + P +S A D + +L P RL A E
Sbjct: 247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT----AEE 302
Query: 612 VKRHPFF 618
HP+
Sbjct: 303 ALSHPYM 309
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 227
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 228 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 228
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 229 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 503 LPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGA 561
L + ++PT ++ + APE I+ SA D W++GI ++E++ +G+ P+
Sbjct: 159 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
Query: 562 GNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHR 602
N+ + N + Q R P A L+ K+ HR
Sbjct: 219 TNQDVI-NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 258
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYV 387
+E I+ DHP + L ++ EF G L + ++ G+ F+ +
Sbjct: 57 SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGML 115
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++YL + ++R L N+LV + +SDF LS
Sbjct: 116 RGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS 156
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL-ALEYLHMLGIIYRDLKPENVLV 414
LV +FC DL L K+ R V ++LL L Y+H I++RD+K NVL+
Sbjct: 101 LVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHRNKILHRDMKAANVLI 157
Query: 415 REDGHIMLSDFDLS 428
DG + L+DF L+
Sbjct: 158 TRDGVLKLADFGLA 171
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 228
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 229 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 227
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 228 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 223
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 224 ------RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 503 LPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGA 561
L + ++PT ++ + APE I+ SA D W++GI ++E++ +G+ P+
Sbjct: 185 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
Query: 562 GNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHR 602
N+ + N + Q R P A L+ K+ HR
Sbjct: 245 TNQDVI-NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 284
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 2/163 (1%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMDXXXXXXXXXXXX 325
+AVR + ++ K+ + +G G+ G V L + K + +
Sbjct: 21 EAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD 80
Query: 326 XQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARF 385
+E I+ DHP + L ++ EF G L + ++ G+ F+
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVG 139
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ + ++YL + ++RDL N+LV + +SDF LS
Sbjct: 140 MLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 228
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 229 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 358 MEFCPGGDLHALRQRQPGKYFSEHAARFYV-AEVLLALEYLHMLGIIYRDLKPENVLVRE 416
M+ C +L R+ EH ++ ++ A+E+LH G+++RDLKP N+
Sbjct: 140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM 199
Query: 417 DGHIMLSDFDL 427
D + + DF L
Sbjct: 200 DDVVKVGDFGL 210
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 506 LIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA 565
L P A VGT Y++PE I G + VD ++ G+ L+ELL+ F R
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERV 280
Query: 566 TLFNVVGQPLRFP 578
+ V + L+FP
Sbjct: 281 RIITDV-RNLKFP 292
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 226
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 227 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 264
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 110 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
L+MEF P G L + K + + Y ++ ++YL ++RDL NVLV
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYLGSRQYVHRDLAARNVLVE 148
Query: 416 EDGHIMLSDFDLS 428
+ + + DF L+
Sbjct: 149 SEHQVKIGDFGLT 161
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K L G G+VY + G K + + + E ++ S+
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 139
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSL 336
FK +K L G G+VY + G K + + + E ++ S+
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 337 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEY 396
D+P + L T L+ + P G L + S++ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 397 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 25 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + S + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 517 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGAGN--RATLFNVVGQ 573
F GT Y PE I+ HG + W+ GI LY+++ G PF+ R +F
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 223
Query: 574 PLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQSV 621
VS + LIR L P R + E++ HP+ Q V
Sbjct: 224 ------RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 378 FSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 425
E AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 20 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 68
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 69 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 372 --RQPGKYFS---------EHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
R PG FS + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 127 ARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 187 NVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMA 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 22/165 (13%)
Query: 273 MGSLGLN--HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTER 330
MGS ++ LK LG G G V + G + A+K++ E
Sbjct: 1 MGSWEIDPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEA 55
Query: 331 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEV 390
+++ +L H L LY + ++ E+ G L Y E RF ++
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL--------NYLREMRHRFQTQQL 107
Query: 391 LL-------ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L A+EYL ++RDL N LV + G + +SDF LS
Sbjct: 108 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 283 LLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLP 342
LK LG G G V + G + A+K++ E +++ +L H L
Sbjct: 28 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 82
Query: 343 TLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL-------ALE 395
LY + ++ E+ G L Y E RF ++L A+E
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLL--------NYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL ++RDL N LV + G + +SDF LS
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 21 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +++EF G+L + + + + ++ A+EYL I+R
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS 159
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 283 LLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLP 342
LK LG G G V + G + A+K++ E +++ +L H L
Sbjct: 28 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 82
Query: 343 TLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL-------ALE 395
LY + ++ E+ G L Y E RF ++L A+E
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLL--------NYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL ++RDL N LV + G + +SDF LS
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 20 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + S + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 20 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + S + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 18 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + S + ++ A+EYL I+R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 25 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ +++EF G+L + + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 425 FDLS 428
F L+
Sbjct: 170 FGLA 173
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVGQ 573
+V T Y APEI + +G+ ++D W+ G L E+L + F G L ++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 574 PLRFPESPSVSFAARDLIRGLLVKE--PQHRL 603
P + + ++ AR+ + L K P +RL
Sbjct: 249 PSQEDLNCGINLKARNYLLSLPHKNKVPWNRL 280
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 77
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 78 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLA 164
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 520 GTHEYLAPEIIK----GEGHGSAVDWWTFGIFLYELLFGKTPF-KGAGNRATLFNVV-GQ 573
G Y+APE I +G+ D W+ GI LYEL G+ P+ K L VV G
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD 246
Query: 574 PLRFPESPSVSFAAR--DLIRGLLVKEPQHRLAYRRGATEVKRHPFF 618
P + S F+ + + L K+ R Y+ E+ +HPF
Sbjct: 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYK----ELLKHPFI 289
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 400 LGIIYRDLKPENVLVREDGHIMLSDFDLS 428
L II+RD+KP N+L+ G+I L DF +S
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 329 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVA 388
E I+ DHP + L K +V E+ G L ++ G+ F+ +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLR 131
Query: 389 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESPS 582
+ APE I SA D W++GI ++E++ +G+ P+ N+ + V + R P
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-KAVEEGYRLPSPMD 251
Query: 583 VSFAARDLIRGLLVKEPQHR 602
A L+ KE R
Sbjct: 252 CPAALYQLMLDCWQKERNSR 271
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 22/146 (15%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHAL----RQRQPG-------- 375
+E +L+ ++HP + LY D L++E+ G L R+ PG
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 376 -----KYFSEHAARF-----YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 425
+ E A + ++ ++YL + +++RDL N+LV E + +SDF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDF 194
Query: 426 DLSLRCAVCPTLVKSSNTSLESKNLS 451
LS + VK S + K ++
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 75
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 76 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 227 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + S + ++ A+EYL I+R
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
+L N LV E+ + ++DF LS
Sbjct: 343 NLAARNCLVGENHLVKVADFGLS 365
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 283 LLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLP 342
LK LG G G V + G + A+K++ E +++ +L H L
Sbjct: 19 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 73
Query: 343 TLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL-------ALE 395
LY + ++ E+ G L Y E RF ++L A+E
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLL--------NYLREMRHRFQTQQLLEMCKDVCEAME 125
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL ++RDL N LV + G + +SDF LS
Sbjct: 126 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 283 LLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLP 342
LK LG G G V + G + A+K++ E +++ +L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 67
Query: 343 TLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL-------ALE 395
LY + ++ E+ G L Y E RF ++L A+E
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLL--------NYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL ++RDL N LV + G + +SDF LS
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 509 EPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATL 567
E TS+R F + PE++ S D W FG+ ++E+ GK P++ N T
Sbjct: 159 EYTSSRGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
Query: 568 FNVVGQPLRF 577
+ + Q LR
Sbjct: 217 EH-IAQGLRL 225
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 79
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 80 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLA 166
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 283 LLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLP 342
LK LG G G V + G + A+K++ E +++ +L H L
Sbjct: 12 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 66
Query: 343 TLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL-------ALE 395
LY + ++ E+ G L Y E RF ++L A+E
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLL--------NYLREMRHRFQTQQLLEMCKDVCEAME 118
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL ++RDL N LV + G + +SDF LS
Sbjct: 119 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 69
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 75
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 76 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 74
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 75 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLA 161
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 78
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 79 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLA 165
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 22/146 (15%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHAL----RQRQPG-------- 375
+E +L+ ++HP + LY D L++E+ G L R+ PG
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 376 -----KYFSEHAARF-----YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 425
+ E A + ++ ++YL + +++RDL N+LV E + +SDF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 426 DLSLRCAVCPTLVKSSNTSLESKNLS 451
LS + VK S + K ++
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 25 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 71
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 72 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLA 158
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 25 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 283 LLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLP 342
LK LG G G V + G + A+K++ E +++ +L H L
Sbjct: 8 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 62
Query: 343 TLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLL-------ALE 395
LY + ++ E+ G L Y E RF ++L A+E
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLL--------NYLREMRHRFQTQQLLEMCKDVCEAME 114
Query: 396 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL ++RDL N LV + G + +SDF LS
Sbjct: 115 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 22/146 (15%)
Query: 328 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHAL----RQRQPG-------- 375
+E +L+ ++HP + LY D L++E+ G L R+ PG
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 376 -----KYFSEHAARF-----YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 425
+ E A + ++ ++YL + +++RDL N+LV E + +SDF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 426 DLSLRCAVCPTLVKSSNTSLESKNLS 451
LS + VK S + K ++
Sbjct: 195 GLSRDVYEEDSYVKRSQGRIPVKWMA 220
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 69
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 21 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS 159
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 425 FDLS 428
F L+
Sbjct: 168 FGLA 171
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXD 167
Query: 425 FDLS 428
F L+
Sbjct: 168 FGLA 171
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVGQ 573
+V T Y APEI + +G+ ++D W+ G L E+L + F G L ++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 574 PLRFPESPSVSFAARDLIRGLLVKE--PQHRL 603
P + + ++ AR+ + L K P +RL
Sbjct: 247 PSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 425 FDLS 428
F L+
Sbjct: 172 FGLA 175
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 70
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 71 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLA 157
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 17/178 (9%)
Query: 267 QAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMG---TKTHFAMKVMDXXXXXXXXXX 323
Q ++ + + L+ + ++ LG G VY L G + A+ +
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 324 XXXQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP----GKYF 378
+ E + L HP + L D+ ++ +C GDLH L R P G
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 379 SEHAAR---------FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
+ + VA++ +EYL ++++DL NVLV + ++ +SD L
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 69
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV 570
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 22 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 24 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 140 DLAARNCLVGENHLVKVADFGLS 162
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+++ ++L L+Y+H +++RDLKP N+L+ + + DF L+
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA 191
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 519 VGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVGQP 574
V T Y APEI + +G+ ++D W+ G L E+L + F G L ++G P
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 575 LRFPESPSVSFAARDLIRGL 594
+ + ++ AR+ ++ L
Sbjct: 268 SQEDLNCIINMKARNYLQSL 287
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 425 FDLS 428
F L+
Sbjct: 172 FGLA 175
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 425 FDLS 428
F L+
Sbjct: 170 FGLA 173
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 61 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 109
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 110 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 167
Query: 372 --RQPGKYFS---------EHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
R PG +S + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 168 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 227
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 261
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 25 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 425 FDLS 428
F L+
Sbjct: 188 FGLA 191
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 329 EREILQSLDHPFLPTLYTHFET----DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
E E L+ L HP + Y +E+ K LV E G L +R K R
Sbjct: 75 EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR--FKVXKIKVLR 132
Query: 385 FYVAEVLLALEYLHMLG--IIYRDLKPENVLVRE-DGHIMLSDFDLS 428
+ ++L L++LH II+RDLK +N+ + G + + D L+
Sbjct: 133 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 515 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQP 574
+ + +GT E+ APE + E + +VD + FG E + P+ N A ++ V
Sbjct: 187 AKAVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSG 245
Query: 575 LRFPESPSVSF-AARDLIRGLLVKEPQHRLAYRRGATEVKRHPFFQ 619
++ V+ +++I G + + R + + ++ H FFQ
Sbjct: 246 VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIK----DLLNHAFFQ 287
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 9 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 57
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 58 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 115
Query: 372 --RQPGKYFS---------EHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
R PG +S + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 116 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 175
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 176 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 69
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 12 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 60
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 61 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 118
Query: 372 --RQPGKYFS---------EHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
R PG +S + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 119 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 178
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 179 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 212
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 425 FDLS 428
F L+
Sbjct: 170 FGLA 173
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 425 FDLS 428
F L+
Sbjct: 168 FGLA 171
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 425 FDLS 428
F L+
Sbjct: 168 FGLA 171
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL---FNVVGQ 573
+V T Y APEI + +G+ ++D W+ G L E+L + F G L ++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 574 PLRFPESPSVSFAARDLIRGLLVKE--PQHRL 603
P + + ++ AR+ + L K P +RL
Sbjct: 247 PSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 13 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 61
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 62 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 119
Query: 372 --RQPGKYFS---------EHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
R PG +S + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 120 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 179
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 180 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 20 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 425 FDLS 428
F L+
Sbjct: 172 FGLA 175
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 519 VGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 20 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 68
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 69 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 372 --RQPGKYFS---------EHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
R PG +S + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 127 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 187 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 22 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 425 FDLS 428
F L+
Sbjct: 173 FGLA 176
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 519 VGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 247
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 5/154 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+++LK +G G G V + H A+K++ + E L+ D
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRI-LEHLRKQDKDN 157
Query: 341 LPTLYTHFETDKFS---CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
+ E F C+ E +L+ L ++ + FS R + +L L+ L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H II+ DLKPEN+L+++ G + D C
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK--TPFKGAGNR-ATLFNV 570
R + + + Y APE+I G +G +D W+ G L ELL G P + G++ A + +
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 571 VGQP 574
+G P
Sbjct: 315 LGMP 318
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 425 FDLS 428
F L+
Sbjct: 173 FGLA 176
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 247
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 355 CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
++ C G L+++ R + R E++ + YLH GI+++DLK +NV
Sbjct: 105 AIITSLCKGRTLYSV-VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163
Query: 415 REDGHIMLSDFDL 427
++G ++++DF L
Sbjct: 164 -DNGKVVITDFGL 175
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 117 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 425 FDLS 428
F L+
Sbjct: 174 FGLA 177
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 248
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 108 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 425 FDLS 428
F L+
Sbjct: 165 FGLA 168
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 239
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 425 FDLS 428
F L+
Sbjct: 172 FGLA 175
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 64
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 65 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV + ++DF L+
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLA 151
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 20 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 425 FDLS 428
F L+
Sbjct: 166 FGLA 169
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 240
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 425 FDLS 428
F L+
Sbjct: 172 FGLA 175
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 425 FDLS 428
F L+
Sbjct: 166 FGLA 169
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 240
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 390 VLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
++ ALE+LH L +I+RD+KP NVL+ G + DF +S
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 22 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 119 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 425 FDLS 428
F L+
Sbjct: 176 FGLA 179
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 250
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 425 FDLS 428
F L+
Sbjct: 168 FGLA 171
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 33 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
DL N LV E+ + ++DF LS
Sbjct: 149 DLAARNCLVGENHLVKVADFGLS 171
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 13/162 (8%)
Query: 279 NHFKLLKRLGCGDIGSVY---LSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQS 335
N L K LG G+ GSV L + GT A+K M +E ++
Sbjct: 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL-SEAACMKD 92
Query: 336 LDHP-FLPTLYTHFETDKFSC----LVMEFCPGGDLHAL----RQRQPGKYFSEHAARFY 386
HP + L E +++ F GDLH R K+ +
Sbjct: 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF 152
Query: 387 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++ L +EYL ++RDL N ++R+D + ++DF LS
Sbjct: 153 MVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 5/154 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+++LK +G G G V + H A+K++ + E L+ D
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRI-LEHLRKQDKDN 157
Query: 341 LPTLYTHFETDKFS---CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
+ E F C+ E +L+ L ++ + FS R + +L L+ L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H II+ DLKPEN+L+++ G + D C
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK--TPFKGAGNR-ATLFNV 570
R + + + Y APE+I G +G +D W+ G L ELL G P + G++ A + +
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 571 VGQP 574
+G P
Sbjct: 315 LGMP 318
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 5/154 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
+++LK +G G G V + H A+K++ + E L+ D
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRI-LEHLRKQDKDN 157
Query: 341 LPTLYTHFETDKFS---CLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYL 397
+ E F C+ E +L+ L ++ + FS R + +L L+ L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 398 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 431
H II+ DLKPEN+L+++ G + D C
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK--TPFKGAGNR-ATLFNVVGQP 574
Y APE+I G +G +D W+ G L ELL G P + G++ A + ++G P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMP 318
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
LVME+ P G +LR P + ++ + YLH I+RDL NVL+
Sbjct: 112 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD 168
Query: 416 EDGHIMLSDFDLS 428
D + + DF L+
Sbjct: 169 NDRLVKIGDFGLA 181
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 552
+ APE +K A D W+FG+ LYELL
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 2/149 (1%)
Query: 281 FKLLKRLGCGDIGSVYLSEL-MGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHP 339
K+ K +G G+ G V L + K + + +E I+ DHP
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 340 FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHM 399
+ L K ++ E+ G L A ++ G+ F+ + + ++YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLSD 128
Query: 400 LGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++RDL N+LV + +SDF +S
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMS 157
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESPS 582
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLPPPMD 237
Query: 583 VSFAARDLIRGLLVKEPQHR 602
A L+ KE R
Sbjct: 238 CPIALHQLMLDCWQKERSDR 257
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 17/172 (9%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMG---TKTHFAMKVMDXXXXXXXXXXXXXQTE 329
+ + L+ + ++ LG G VY L G + A+ + + E
Sbjct: 3 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 62
Query: 330 REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP----GKYFSEHAAR 384
+ L HP + L D+ ++ +C GDLH L R P G + +
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 385 ---------FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 427
VA++ +EYL ++++DL NVLV + ++ +SD L
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 224 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 339
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
+L N LV E+ + ++DF LS
Sbjct: 340 NLAARNCLVGENHLVKVADFGLS 362
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 286 RLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLPTLY 345
+LG G G VY G +++ V E +++ + HP L L
Sbjct: 266 KLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 346 THFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+ ++ EF G+L + + + + ++ A+EYL I+R
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
Query: 406 DLKPENVLVREDGHIMLSDFDLS 428
+L N LV E+ + ++DF LS
Sbjct: 382 NLAARNCLVGENHLVKVADFGLS 404
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 365 DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 424
DL+ L + Q + S +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKCQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 425 FDLS 428
F L+
Sbjct: 172 FGLA 175
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 518 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVG 572
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Query: 279 NHFKLLKRLGCGDIGSVY----LSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQ 334
+ +K LG G G+VY + + K A+KV+ E ++
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEIL--DEAYVMA 74
Query: 335 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLAL 394
+ P++ L T LV + P G L + G+ S+ + ++ +
Sbjct: 75 GVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLN-WCMQIAKGM 132
Query: 395 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
YL + +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 SYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 19/170 (11%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
L N K +G G+ G V + + G + A+K M E E+L
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA--GELEVL 79
Query: 334 QSLDH-PFLPTLYTHFETDKFSCLVMEFCPGGDL-HALRQRQ-------------PGKYF 378
L H P + L E + L +E+ P G+L LR+ +
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 379 SEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
S + A+V ++YL I+RDL N+LV E+ ++DF LS
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESPS 582
++A E + + + D W++G+ L+E++ G TP+ G A L+ + Q R + +
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYRLEKPLN 265
Query: 583 VSFAARDLIRGLLVKEPQHR 602
DL+R ++P R
Sbjct: 266 CDDEVYDLMRQCWREKPYER 285
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 19/170 (11%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
L N K +G G+ G V + + G + A+K M E E+L
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA--GELEVL 69
Query: 334 QSLDH-PFLPTLYTHFETDKFSCLVMEFCPGGDL-HALRQRQ-------------PGKYF 378
L H P + L E + L +E+ P G+L LR+ +
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 379 SEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
S + A+V ++YL I+RDL N+LV E+ ++DF LS
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESPS 582
++A E + + + D W++G+ L+E++ G TP+ G A L+ + Q R + +
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYRLEKPLN 255
Query: 583 VSFAARDLIRGLLVKEPQHR 602
DL+R ++P R
Sbjct: 256 CDDEVYDLMRQCWREKPYER 275
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL K+LG G G V+++ T A+K M E ++++L H
Sbjct: 184 LKLEKKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFL----AEANVMKTLQHDK 238
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L L+ T + ++ EF G L + G + A++ + ++
Sbjct: 239 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCP 435
I+RDL+ N+LV ++DF L+ A P
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARVGAKFP 332
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGN 563
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 393 ALEYLHMLGIIYRDLKPENVLV---REDGHI--MLSDFDLSLRCAV 433
L +LH L I++RDLKP N+L+ G I M+SDF L + AV
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL++RLG G G V++ G T A+K + E +++ L H
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQR 65
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 66 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+R+L+ N+LV + ++DF L+
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLA 152
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 327 QTEREILQSLDHPFLPTLYTHFET--DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
Q E EIL++L H + E +K LVME+ P G +LR P
Sbjct: 59 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLL 115
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++ + YLH I+R L NVL+ D + + DF L+
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 552
+ APE +K A D W+FG+ LYELL
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 327 QTEREILQSLDHPFLPTLYTHFET--DKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAAR 384
Q E EIL++L H + E +K LVME+ P G +LR P
Sbjct: 58 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLL 114
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+ ++ + YLH I+R L NVL+ D + + DF L+
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 552
+ APE +K A D W+FG+ LYELL
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 13/151 (8%)
Query: 274 GSLGLN-----HFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQT 328
G++G+ F L+++G G+ GSV+ +A+K
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNA 57
Query: 329 EREILQSL---DHPFLPTLYTHFETDKFSCLVMEFCPGGDL-HALRQR-QPGKYFSEHAA 383
RE+ H + ++ + D + E+C GG L A+ + + YF E
Sbjct: 58 LREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 384 RFYVAEVLLALEYLHMLGIIYRDLKPENVLV 414
+ + +V L Y+H + +++ D+KP N+ +
Sbjct: 118 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL K+LG G G V+++ T A+K M E ++++L H
Sbjct: 17 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFL----AEANVMKTLQHDK 71
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L L+ T + ++ EF G L + G + A++ + ++
Sbjct: 72 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV ++DF L+
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLA 158
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGN 563
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 8/149 (5%)
Query: 271 SHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTER 330
+ M S F L+++G G+ GSV+ +A+K R
Sbjct: 1 AEMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALR 57
Query: 331 EILQSL---DHPFLPTLYTHFETDKFSCLVMEFCPGGDL-HALRQR-QPGKYFSEHAARF 385
E+ H + ++ + D + E+C GG L A+ + + YF E +
Sbjct: 58 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 117
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLV 414
+ +V L Y+H + +++ D+KP N+ +
Sbjct: 118 LLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 20 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 68
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 69 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 372 RQ--PGKYFS---------EHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
+ PG +S + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 127 AREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 187 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
N F+L +++G G G +YL + T A+K+ + E +I + L
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-----ESKIYRILQG 61
Query: 339 -PFLPTLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+P + ++ LVM+ DL R+ S +++ +E
Sbjct: 62 GTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK----LSLKTVLMLADQMINRVE 117
Query: 396 YLHMLGIIYRDLKPENVLV---REDGHIMLSDFDLS 428
++H ++RD+KP+N L+ R + + DF L+
Sbjct: 118 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 281 FKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 340
KL K+LG G G V+++ T A+K M E ++++L H
Sbjct: 190 LKLEKKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFL----AEANVMKTLQHDK 244
Query: 341 LPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHML 400
L L+ T + ++ EF G L + G + A++ + ++
Sbjct: 245 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 401 GIIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL+ N+LV ++DF L+
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLA 331
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGN 563
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 5 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 53
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 54 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 111
Query: 372 --RQPGKYF---------SEHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
R PG + + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 112 ARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 171
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 205
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
M S F L+++G G+ GSV+ +A+K RE+
Sbjct: 3 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREV 59
Query: 333 LQSL---DHPFLPTLYTHFETDKFSCLVMEFCPGGDL-HALRQR-QPGKYFSEHAARFYV 387
H + ++ + D + E+C GG L A+ + + YF E + +
Sbjct: 60 YAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 119
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLV 414
+V L Y+H + +++ D+KP N+ +
Sbjct: 120 LQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
M S F L+++G G+ GSV+ +A+K RE+
Sbjct: 1 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREV 57
Query: 333 LQSL---DHPFLPTLYTHFETDKFSCLVMEFCPGGDL-HALRQR-QPGKYFSEHAARFYV 387
H + ++ + D + E+C GG L A+ + + YF E + +
Sbjct: 58 YAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 117
Query: 388 AEVLLALEYLHMLGIIYRDLKPENVLV 414
+V L Y+H + +++ D+KP N+ +
Sbjct: 118 LQVGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 35/214 (16%)
Query: 260 DVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTK-------THFAMKVM 312
D RWE L + L K LG G G V L+E +G T A+K++
Sbjct: 20 DPRWE-----------LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 68
Query: 313 DXXXXXXXXXXXXXQTEREILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ 371
+E E+++ + H + L D +++E+ G+L Q
Sbjct: 69 KSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 372 --RQPGKYF---------SEHAARFYVA---EVLLALEYLHMLGIIYRDLKPENVLVRED 417
R PG + + +++ V+ +V +EYL I+RDL NVLV ED
Sbjct: 127 ARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 418 GHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
+ ++DF L+ K++N L K ++
Sbjct: 187 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL 567
+ V T Y APE+I G D W+ G ++E G T F+ NR L
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
LVME+ P G +LR P + ++ + YLH I+R+L NVL+
Sbjct: 95 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLD 151
Query: 416 EDGHIMLSDFDLS 428
D + + DF L+
Sbjct: 152 NDRLVKIGDFGLA 164
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 552
+ APE +K A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
N ++L +++G G G +YL + A+K+ E +I + +
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-----ECVKTKHPQLHIESKIYKMMQG 63
Query: 339 PF-LPTLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+PT+ ++ +VME DL R+ FS +++ +E
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 119
Query: 396 YLHMLGIIYRDLKPENVLV---REDGHIMLSDFDLS 428
Y+H I+RD+KP+N L+ ++ + + DF L+
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 582 SVSFAARDLIRGLLVKEPQHRLAYRR 607
D+++ +P R +++
Sbjct: 290 HAPAEMYDIMKTCWDADPLKRPTFKQ 315
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 582 SVSFAARDLIRGLLVKEPQHRLAYRR 607
D+++ +P R +++
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 582 SVSFAARDLIRGLLVKEPQHRLAYRR 607
D+++ +P R +++
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 582 SVSFAARDLIRGLLVKEPQHRLAYRR 607
D+++ +P R +++
Sbjct: 288 HAPAEMYDIMKTCWDADPLKRPTFKQ 313
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESP 581
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 582 SVSFAARDLIRGLLVKEPQHRLAYRR 607
D+++ +P R +++
Sbjct: 272 HAPAEMYDIMKTCWDADPLKRPTFKQ 297
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVR 415
LVME+ P G +LR P + ++ + YLH I+R+L NVL+
Sbjct: 95 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLD 151
Query: 416 EDGHIMLSDFDLS 428
D + + DF L+
Sbjct: 152 NDRLVKIGDFGLA 164
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 552
+ APE +K A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 20/193 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGT-----KTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
+ L K LG G G V ++E +G K + V +E E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 334 QSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP-GKYFSEHAARFYVAEV 390
+ + H + TL D +++E+ G+L LR R+P G +S R ++
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 391 LL------------ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLV 438
+EYL I+RDL NVLV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 439 KSSNTSLESKNLS 451
K++N L K ++
Sbjct: 215 KTTNGRLPVKWMA 227
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
N ++L +++G G G +YL + A+K+ E +I + +
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-----ECVKTKHPQLHIESKIYKMMQG 61
Query: 339 PF-LPTLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+PT+ ++ +VME DL R+ FS +++ +E
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 117
Query: 396 YLHMLGIIYRDLKPENVLV---REDGHIMLSDFDLS 428
Y+H I+RD+KP+N L+ ++ + + DF L+
Sbjct: 118 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 19/170 (11%)
Query: 276 LGLNHFKLLKRLGCGDIGSVYLSELM--GTKTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
L N K +G G+ G V + + G + A+K M E E+L
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA--GELEVL 76
Query: 334 QSLDH-PFLPTLYTHFETDKFSCLVMEFCPGGDL-HALRQRQ-------------PGKYF 378
L H P + L E + L +E+ P G+L LR+ +
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 379 SEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
S + A+V ++YL I+R+L N+LV E+ ++DF LS
Sbjct: 137 SSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVGQPLRFPESPS 582
++A E + + + D W++G+ L+E++ G TP+ G A L+ + Q R + +
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYRLEKPLN 262
Query: 583 VSFAARDLIRGLLVKEPQHR 602
DL+R ++P R
Sbjct: 263 CDDEVYDLMRQCWREKPYER 282
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 14/153 (9%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G L + ++++LG G +V+L M K AMKV+ + + +
Sbjct: 25 IGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCV 84
Query: 333 LQSL----DHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHALRQRQPGKY--FSEHA 382
+S + + L F+ + C+V E H L+ Y
Sbjct: 85 RESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH---HLLKWIIKSNYQGLPVRC 141
Query: 383 ARFYVAEVLLALEYLH-MLGIIYRDLKPENVLV 414
+ + +VL L+YLH II+ D+KPEN+L+
Sbjct: 142 VKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 29/177 (16%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTK-----THFAMKVMDXXXXXXXXXXXXXQTEREIL 333
N+ + ++ +G G G V+ + G T A+K++ Q E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF--QREAALM 104
Query: 334 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHAL---------------------RQR 372
D+P + L K CL+ E+ GDL+ R
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 373 QPGKYFSEHAARFYVA-EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
PG A + +A +V + YL ++RDL N LV E+ + ++DF LS
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 283 LLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPFLP 342
LLK LG G G V L + G + A+K++ QT + L HP L
Sbjct: 12 LLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSEDEFFQEAQT----MMKLSHPKLV 66
Query: 343 TLYTHFETDKFSCLVMEFCPGG-DLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLG 401
Y + +V E+ G L+ LR G S+ Y +V + +L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY--DVCEGMAFLESHQ 124
Query: 402 IIYRDLKPENVLVREDGHIMLSDFDLS 428
I+RDL N LV D + +SDF ++
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMT 151
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 516 MSFVGTH---EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV 570
+S VGT ++ APE+ + S D W FGI ++E+ GK P+ N + V
Sbjct: 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 14/153 (9%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G L + ++++LG G +V+LS + K AMKV+ + + +
Sbjct: 31 IGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSV 90
Query: 333 LQSL----DHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHALRQRQPGKY--FSEHA 382
S + + L F+ + C+V E H L+ Y
Sbjct: 91 RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH---HLLKWIIKSNYQGLPLPC 147
Query: 383 ARFYVAEVLLALEYLHM-LGIIYRDLKPENVLV 414
+ + +VL L+YLH II+ D+KPEN+L+
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 386 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSL 445
Y +V +E+L I+RDL N+L+ E+ + + DF L+ P V+ +T L
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 446 ESKNLS 451
K ++
Sbjct: 264 PLKWMA 269
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 560
+++APE I + + + D W++G+ L+E+ G +P+ G
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPG 304
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV-----VGQPLRF 577
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 254
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
PE + DL+R P+ R + +K HP F V++
Sbjct: 255 PERVT------DLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 296
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV-----VGQPLRF 577
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
PE + DL+R P+ R + +K HP F V++
Sbjct: 258 PERVT------DLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 14/153 (9%)
Query: 273 MGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREI 332
+G L + ++++LG G +V+LS + K AMKV+ + + +
Sbjct: 15 IGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSV 74
Query: 333 LQSL----DHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHALRQRQPGKY--FSEHA 382
S + + L F+ + C+V E H L+ Y
Sbjct: 75 RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH---HLLKWIIKSNYQGLPLPC 131
Query: 383 ARFYVAEVLLALEYLHM-LGIIYRDLKPENVLV 414
+ + +VL L+YLH II+ D+KPEN+L+
Sbjct: 132 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 164
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 524 YLAPEIIKGEGHGS---AVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPES 580
++APE ++ + + + D W+F + L+EL+ + PF N V + LR
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP 233
Query: 581 PSVSFAARDLIRGLLVKEPQHR 602
P +S L++ + ++P R
Sbjct: 234 PGISPHVSKLMKICMNEDPAKR 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVV-GQPLRFPES- 580
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 262
Query: 581 PSVSFAARDLIRGLLVKEPQHR 602
P +A ++RG +EPQ R
Sbjct: 263 PPEVYA---IMRGCWQREPQQR 281
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV-----VGQPLRF 577
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
PE + DL+R P+ R + +K HP F V++
Sbjct: 258 PERVT------DLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV-----VGQPLRF 577
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 256
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
PE + DL+R P+ R + +K HP F V++
Sbjct: 257 PERVT------DLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 298
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV-----VGQPLRF 577
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
PE + DL+R P+ R + +K HP F V++
Sbjct: 258 PERVT------DLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVV-GQPLRFPES- 580
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 256
Query: 581 PSVSFAARDLIRGLLVKEPQHR 602
P +A ++RG +EPQ R
Sbjct: 257 PPEVYA---IMRGCWQREPQQR 275
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 519 VGTH-----EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVVG 572
VG H ++ PE I + D W+FG+ L+E+ +GK P+ N + +
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-TEVIECIT 249
Query: 573 QPLRFPESPSVS-FAARDLIRGLLVKEPQHRL 603
Q R E P V D++ G +EPQ RL
Sbjct: 250 QG-RVLERPRVCPKEVYDVMLGCWQREPQQRL 280
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 60/164 (36%), Gaps = 19/164 (11%)
Query: 283 LLKR-LGCGDIGSVYLSE---LMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
+LKR LG G G V+L+E L TK + V Q E E+L +L H
Sbjct: 18 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAV-KALKDPTLAARKDFQREAELLTNLQH 76
Query: 339 PFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQ--------------RQPGKYFSEHAAR 384
+ Y +V E+ GDL+ + RQ
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 385 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 428
+++ + YL ++RDL N LV + + + DF +S
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV-----VGQPLRF 577
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
PE + DL+R P R + +K HP F V++
Sbjct: 258 PERVT------DLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNVV-GQPLRFPES- 580
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 285
Query: 581 PSVSFAARDLIRGLLVKEPQHR 602
P +A ++RG +EPQ R
Sbjct: 286 PPEVYA---IMRGCWQREPQQR 304
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV-----VGQPLRF 577
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
PE + DL+R P R + +K HP F V++
Sbjct: 258 PERVT------DLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 20/193 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGT-----KTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
+ L K LG G G V ++E +G K + V +E E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 334 QSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP-GKYFSEHAARFYVAEV 390
+ + H + L D +++E+ G+L LR R+P G +S R ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 391 LL------------ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLV 438
+EYL I+RDL NVLV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 439 KSSNTSLESKNLS 451
K++N L K ++
Sbjct: 215 KTTNGRLPVKWMA 227
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL 567
+ V T Y PE+I G D W+ G L+E G T F+ NR L
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL 567
+ V T Y PE+I G D W+ G L+E G T F+ NR L
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 329 EREILQSLDHPFLPTLYTHF--ETDKFSCLVMEFCPGGDLHALRQRQPGK------YFSE 380
E +L+ L HP + +L F D+ L+ ++ H ++ + K
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 381 HAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG 418
+ + ++L + YLH +++RDLKP N+LV +G
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG 165
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGAGNRATLFNV-----VGQPLRF 577
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 258
Query: 578 PESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
PE + DL+R P R + +K HP F V++
Sbjct: 259 PERVT------DLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 300
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATL 567
+ V T Y PE+I G D W+ G L+E G T F+ NR L
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 524 YLAPEIIKGEGH---GSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPES 580
Y PEII + G D W G LY L F + PF+ +V P
Sbjct: 216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK----LRIVNGKYSIPPH 271
Query: 581 PSVSFAARDLIRGLLVKEPQHRLA 604
+ LIR +L P+ RL+
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLS 295
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 356 LVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLG--IIYRDLKPENVL 413
L+ E C G + L++ + S + A++++H II+RDLK EN+L
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170
Query: 414 VREDGHIMLSDF 425
+ G I L DF
Sbjct: 171 LSNQGTIKLCDF 182
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 265
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 266 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 307
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 265
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 266 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 307
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 258
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 259 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 300
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 20/193 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGT-----KTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
+ L K LG G G V ++E +G K + V +E E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 334 QSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP-GKYFSEHAARFYVAEV 390
+ + H + L D +++E+ G+L LR R+P G +S R ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 391 LL------------ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLV 438
+EYL I+RDL NVLV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 439 KSSNTSLESKNLS 451
K++N L K ++
Sbjct: 215 KTTNGRLPVKWMA 227
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 258
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 259 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 300
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 20/193 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGT-----KTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
+ L K LG G G V ++E +G K + V +E E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 334 QSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP-GKYFSEHAARFYVAEV 390
+ + H + L D +++E+ G+L LR R+P G +S R ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 391 LL------------ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLV 438
+EYL I+RDL NVLV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 439 KSSNTSLESKNLS 451
K++N L K ++
Sbjct: 215 KTTNGRLPVKWMA 227
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R + + Y +PE++ G + A+D W+ G L E+ G+ F GA N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 272
Query: 574 PLRFP 578
L P
Sbjct: 273 VLGIP 277
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 340 FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHM 399
++ L HF CLV E +L+ L + + S + R + ++ AL +L
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 400 --LGIIYRDLKPENVLV 414
L II+ DLKPEN+L+
Sbjct: 176 PELSIIHCDLKPENILL 192
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R + + Y +PE++ G + A+D W+ G L E+ G+ F GA N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 272
Query: 574 PLRFP 578
L P
Sbjct: 273 VLGIP 277
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 340 FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHM 399
++ L HF CLV E +L+ L + + S + R + ++ AL +L
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 400 --LGIIYRDLKPENVLV 414
L II+ DLKPEN+L+
Sbjct: 176 PELSIIHCDLKPENILL 192
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 256
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 257 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 298
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 514 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQ 573
R + + Y +PE++ G + A+D W+ G L E+ G+ F GA N N + +
Sbjct: 195 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 253
Query: 574 PLRFP 578
L P
Sbjct: 254 VLGIP 258
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 340 FLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHM 399
++ L HF CLV E +L+ L + + S + R + ++ AL +L
Sbjct: 98 YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 156
Query: 400 --LGIIYRDLKPENVLV 414
L II+ DLKPEN+L+
Sbjct: 157 PELSIIHCDLKPENILL 173
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 356 LVMEFCPGGDLHA-LRQRQ----PGK-----YFSEHAARFYVAEVLLALEYLHMLGIIYR 405
+++EFC G+L LR ++ P K + + Y +V +E+L I+R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 168
Query: 406 DLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKSSNTSLESKNLS 451
DL N+L+ E + + DF L+ P V+ + L K ++
Sbjct: 169 DLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 523 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGA 561
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 259
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 260 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 301
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 255
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 256 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 297
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 20/193 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGT-----KTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
+ L K LG G G V ++E +G K + V +E E++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 334 QSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP-GKYFSEHAARFYVAEV 390
+ + H + L D +++E+ G+L LR R+P G +S R ++
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 391 LL------------ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLV 438
+EYL I+RDL NVLV E+ + ++DF L+
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 439 KSSNTSLESKNLS 451
K++N L K ++
Sbjct: 261 KTTNGRLPVKWMA 273
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 259
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 260 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 301
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 252
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 253 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 294
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 517 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 558
+ V T Y APE+I G D W+ G L E G T F
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 524 YLAPEIIKGEGHGSAVDWWTFGIFLYEL-LFGKTPFKGAGNRATL-FNVVGQPLRFPES- 580
+++PE +K + D W+FG+ L+E+ + P++G N L F + G L P++
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 287
Query: 581 PSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKR--HPFFQSVNW 623
P + F +L+R P+ R ++ + +K P F+ V++
Sbjct: 288 PDMLF---ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 329
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 20/193 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGT-----KTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
+ L K LG G G V ++E +G K + V +E E++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 334 QSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP-GKYFSEHAARFYVAEV 390
+ + H + L D +++E+ G+L LR R+P G +S R ++
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 391 LL------------ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLV 438
+EYL I+RDL NVLV E+ + ++DF L+
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 439 KSSNTSLESKNLS 451
K++N L K ++
Sbjct: 204 KTTNGRLPVKWMA 216
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDH 338
N ++L +++G G G +YL + + A+K+ E + + +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKL-----ECVKTKHPQLHIESKFYKMMQG 63
Query: 339 PF-LPTLYTHFETDKFSCLVMEFCPGG--DLHALRQRQPGKYFSEHAARFYVAEVLLALE 395
+P++ ++ +VME DL R+ FS +++ +E
Sbjct: 64 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 119
Query: 396 YLHMLGIIYRDLKPENVLV---REDGHIMLSDFDLS 428
Y+H I+RD+KP+N L+ ++ + + DF L+
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 20/193 (10%)
Query: 279 NHFKLLKRLGCGDIGSVYLSELMGT-----KTHFAMKVMDXXXXXXXXXXXXXQTEREIL 333
+ L K LG G G V ++E +G K + V +E E++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 334 QSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHA-LRQRQP-GKYFSEHAARFYVAEV 390
+ + H + L D +++E+ G+L LR R+P G +S R ++
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 391 LL------------ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLV 438
+EYL I+RDL NVLV E+ + ++DF L+
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 439 KSSNTSLESKNLS 451
K++N L K ++
Sbjct: 207 KTTNGRLPVKWMA 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,010,309
Number of Sequences: 62578
Number of extensions: 626299
Number of successful extensions: 4112
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 1357
Number of HSP's gapped (non-prelim): 2123
length of query: 677
length of database: 14,973,337
effective HSP length: 105
effective length of query: 572
effective length of database: 8,402,647
effective search space: 4806314084
effective search space used: 4806314084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)