Query 005794
Match_columns 677
No_of_seqs 207 out of 252
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 07:35:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005794.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005794hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vjja3 b.1.5.1 (A:594-692) Tr 9.6 50 0.0037 26.8 1.4 28 277-304 13-40 (99)
2 d2q3za3 b.1.5.1 (A:586-683) Tr 8.3 62 0.0045 26.1 1.5 28 277-304 14-41 (98)
3 d2fo1d1 a.137.14.1 (D:52-114) 6.5 2.1E+02 0.016 21.1 3.6 27 209-235 18-44 (63)
4 d1g0da3 b.1.5.1 (A:584-684) Tr 6.0 69 0.005 26.0 0.6 27 278-304 15-41 (101)
5 d1ex0a3 b.1.5.1 (A:628-727) Tr 5.5 65 0.0047 26.1 0.1 28 277-304 15-42 (100)
6 d1sqwa2 d.17.6.3 (A:1-94) Nip7 4.5 2E+02 0.014 23.3 2.5 16 568-583 33-48 (94)
7 d1tpna_ g.27.1.1 (A:) Tissue-t 3.6 1E+02 0.0073 22.4 -0.1 14 384-397 17-36 (50)
8 d2pbza2 d.142.1.9 (A:100-312) 3.6 4.1E+02 0.03 24.2 4.2 20 568-592 70-89 (213)
9 d1ywia1 b.72.1.1 (A:15-42) Hun 3.0 2.5E+02 0.019 17.8 1.5 13 576-588 10-22 (28)
10 d1dkza1 a.8.4.1 (A:507-603) Dn 2.9 5.6E+02 0.041 19.5 4.0 33 203-235 1-33 (97)
No 1
>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
Probab=9.55 E-value=50 Score=26.78 Aligned_cols=28 Identities=25% Similarity=0.246 Sum_probs=22.6
Q ss_pred CCcccccccccccCCCCCCCCCceeecc
Q 005794 277 KPTTFLCKLKFRNELPEPSAQPKLMALK 304 (677)
Q Consensus 277 r~~~fi~~iry~N~LP~pP~~PKLL~~p 304 (677)
-..++-+.+.|+|.|+.+--+|+|.--.
T Consensus 13 v~~~~~v~vsf~NPL~~~L~~c~f~vEG 40 (99)
T d1vjja3 13 VRKPVNVQMLFSNPLDEPVRDCVLMVEG 40 (99)
T ss_dssp TTSCEEEEEEEECCSSSCBCSEEEEEEC
T ss_pred cCCeEEEEEEEECCCCCchhCEEEEEEe
Confidence 3467889999999999998888876544
No 2
>d2q3za3 b.1.5.1 (A:586-683) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=8.35 E-value=62 Score=26.13 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=22.6
Q ss_pred CCcccccccccccCCCCCCCCCceeecc
Q 005794 277 KPTTFLCKLKFRNELPEPSAQPKLMALK 304 (677)
Q Consensus 277 r~~~fi~~iry~N~LP~pP~~PKLL~~p 304 (677)
-..++-+.+.|.|.|+.+--+|+|.--.
T Consensus 14 vg~~~~v~vsF~NPL~~~L~~c~~~vEG 41 (98)
T d2q3za3 14 QKRKLVAEVSLQNPLPVALEGCTFTVEG 41 (98)
T ss_dssp SSSCEEEEEEEECCSSSCBCSEEEEEEC
T ss_pred cCCeEEEEEEEECCCCCchhCEEEEEEc
Confidence 4467889999999999988888876544
No 3
>d2fo1d1 a.137.14.1 (D:52-114) Abnormal cell lineage protein 3, Lag-3 {Caenorhabditis elegans [TaxId: 6239]}
Probab=6.55 E-value=2.1e+02 Score=21.06 Aligned_cols=27 Identities=26% Similarity=0.302 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 005794 209 IRKKREYEKHRQEEKHRLQMKESQNVV 235 (677)
Q Consensus 209 ~r~~r~~~k~~~~ek~~q~~k~~q~~~ 235 (677)
+-++|-.+--+.|+|.||++-.+|.++
T Consensus 18 ~~r~rs~~a~~~~~k~r~e~i~~qrav 44 (63)
T d2fo1d1 18 LHRQRSELARANYEKARPEMIANQRAV 44 (63)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHhHHHH
Confidence 334444445667899999988887755
No 4
>d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Probab=6.04 E-value=69 Score=25.99 Aligned_cols=27 Identities=19% Similarity=0.161 Sum_probs=21.8
Q ss_pred CcccccccccccCCCCCCCCCceeecc
Q 005794 278 PTTFLCKLKFRNELPEPSAQPKLMALK 304 (677)
Q Consensus 278 ~~~fi~~iry~N~LP~pP~~PKLL~~p 304 (677)
..++-+.|.|.|.|+.+--+|+|.--.
T Consensus 15 ~~~~~v~vsf~NPL~~~L~~c~~~vEG 41 (101)
T d1g0da3 15 WEPLTAYVSFTNPLPVPLKGGVFTLEG 41 (101)
T ss_dssp TCCEEEEEEEECCSSSCEESCEEEEEE
T ss_pred CCeEEEEEEEECCCCCeecCEEEEEEc
Confidence 366889999999999988888875443
No 5
>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Probab=5.46 E-value=65 Score=26.12 Aligned_cols=28 Identities=14% Similarity=0.074 Sum_probs=21.8
Q ss_pred CCcccccccccccCCCCCCCCCceeecc
Q 005794 277 KPTTFLCKLKFRNELPEPSAQPKLMALK 304 (677)
Q Consensus 277 r~~~fi~~iry~N~LP~pP~~PKLL~~p 304 (677)
-..++-+.+.|+|.|+.+--+|+|.--.
T Consensus 15 v~~~~~v~v~F~NPL~~~L~nc~~~vEG 42 (100)
T d1ex0a3 15 VGSDMTVTVQFTNPLKETLRNVWVHLDG 42 (100)
T ss_dssp TTSCEEEEEEEECCSSSCEEEEEEEEEE
T ss_pred cCCeEEEEEEEECCCCCchhCEEEEEEc
Confidence 3477889999999998887777775533
No 6
>d1sqwa2 d.17.6.3 (A:1-94) Nip7p homolog, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.54 E-value=2e+02 Score=23.32 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=14.3
Q ss_pred ceEEEEEcCCceEEec
Q 005794 568 TTYLVSFDDDEARYVP 583 (677)
Q Consensus 568 ~e~~l~Fddg~AyY~P 583 (677)
+.|||.+.++.|||..
T Consensus 33 ~~y~FRLhk~RVyYvs 48 (94)
T d1sqwa2 33 GTYCFRLHNDRVYYVS 48 (94)
T ss_dssp EEEEEEEETTEEEEEE
T ss_pred CCEEEEEeCCEEEEEh
Confidence 4799999999999985
No 7
>d1tpna_ g.27.1.1 (A:) Tissue-type plasminogen activator, t-PA {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.61 E-value=1e+02 Score=22.41 Aligned_cols=14 Identities=29% Similarity=0.517 Sum_probs=10.8
Q ss_pred CCccCcc------ccccccc
Q 005794 384 KGVSWLV------KTQYISP 397 (677)
Q Consensus 384 ~~VSWLR------RTEYISs 397 (677)
...|||| |.||.-=
T Consensus 17 ~~~sWLRp~lrGnrvEyCrC 36 (50)
T d1tpna_ 17 QHQSWLRPVLRSNRVEYCWC 36 (50)
T ss_dssp TTCEEEECCSSSSCCEEEEC
T ss_pred cCcceecccccCCceEEEEE
Confidence 4689999 7888754
No 8
>d2pbza2 d.142.1.9 (A:100-312) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=3.61 E-value=4.1e+02 Score=24.20 Aligned_cols=20 Identities=30% Similarity=0.471 Sum_probs=15.8
Q ss_pred ceEEEEEcCCceEEecCCCcceecc
Q 005794 568 TTYLVSFDDDEARYVPLPTKLNLRK 592 (677)
Q Consensus 568 ~e~~l~Fddg~AyY~PL~tRi~LRK 592 (677)
..|.|-| ||.||..|++|--
T Consensus 70 ~~~~~~y-----FySpi~~~lEllg 89 (213)
T d2pbza2 70 VYLYVHF-----FYSPILERLELLG 89 (213)
T ss_dssp CEEEEEE-----EEETTTTEEEEEE
T ss_pred ceeeeee-----eccccccceeeEe
Confidence 3566666 8999999999865
No 9
>d1ywia1 b.72.1.1 (A:15-42) Huntingtin-interacting protein HYPA/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.01 E-value=2.5e+02 Score=17.78 Aligned_cols=13 Identities=31% Similarity=0.312 Sum_probs=10.3
Q ss_pred CCceEEecCCCcc
Q 005794 576 DDEARYVPLPTKL 588 (677)
Q Consensus 576 dg~AyY~PL~tRi 588 (677)
+|.+||+...++-
T Consensus 10 ~G~~YYyN~~T~e 22 (28)
T d1ywia1 10 DGRTYYYNTETKQ 22 (28)
T ss_dssp TTEEEEEETTTTE
T ss_pred CCCEEEeECCCCC
Confidence 6789999887764
No 10
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Probab=2.92 E-value=5.6e+02 Score=19.49 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 005794 203 TEEERRIRKKREYEKHRQEEKHRLQMKESQNVV 235 (677)
Q Consensus 203 ~~ee~~~r~~r~~~k~~~~ek~~q~~k~~q~~~ 235 (677)
+.+++++|..++.++.+.+++++-+.-+..|..
T Consensus 1 LS~~EIerMi~eAe~~a~eD~~~r~~ie~rn~a 33 (97)
T d1dkza1 1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQG 33 (97)
T ss_dssp CCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Done!