Query 005796
Match_columns 677
No_of_seqs 265 out of 803
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 13:51:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005796.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005796hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 1.4E-62 3E-67 544.8 27.4 345 330-675 97-460 (464)
2 PF03016 Exostosin: Exostosin 100.0 1.3E-52 2.8E-57 433.7 21.6 279 345-628 2-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 100.0 2E-32 4.3E-37 297.4 18.4 316 330-677 178-531 (907)
4 KOG1022 Acetylglucosaminyltran 99.9 1.8E-26 3.8E-31 250.9 13.3 333 314-676 61-413 (691)
5 PF00852 Glyco_transf_10: Glyc 97.4 0.00043 9.4E-09 75.4 7.8 154 476-636 138-305 (349)
6 cd03801 GT1_YqgM_like This fam 96.9 0.005 1.1E-07 62.1 9.7 96 553-651 266-364 (374)
7 PLN02871 UDP-sulfoquinovose:DA 96.6 0.0076 1.6E-07 67.4 9.5 115 554-671 323-443 (465)
8 cd03821 GT1_Bme6_like This fam 96.5 0.012 2.6E-07 60.2 9.5 93 554-651 273-368 (375)
9 cd03814 GT1_like_2 This family 96.5 0.0055 1.2E-07 63.1 6.9 96 553-651 257-354 (364)
10 cd03794 GT1_wbuB_like This fam 96.5 0.018 4E-07 59.0 10.3 96 553-651 285-388 (394)
11 cd03820 GT1_amsD_like This fam 96.3 0.0072 1.6E-07 61.0 6.3 96 554-651 244-341 (348)
12 cd03822 GT1_ecORF704_like This 96.3 0.0083 1.8E-07 62.0 6.8 96 553-652 258-357 (366)
13 PF00534 Glycos_transf_1: Glyc 96.2 0.0065 1.4E-07 57.5 5.0 84 554-640 84-169 (172)
14 cd05844 GT1_like_7 Glycosyltra 96.1 0.036 7.7E-07 58.4 10.4 96 554-652 256-360 (367)
15 cd03818 GT1_ExpC_like This fam 95.9 0.042 9.2E-07 59.7 10.4 105 539-651 282-389 (396)
16 cd03809 GT1_mtfB_like This fam 95.9 0.04 8.8E-07 56.9 9.3 93 554-651 264-358 (365)
17 TIGR03449 mycothiol_MshA UDP-N 95.8 0.044 9.4E-07 59.3 9.6 97 554-653 294-392 (405)
18 TIGR03088 stp2 sugar transfera 95.8 0.039 8.4E-07 58.9 9.0 97 554-653 264-363 (374)
19 cd03819 GT1_WavL_like This fam 95.5 0.032 6.9E-07 58.2 7.0 94 554-650 255-353 (355)
20 cd03808 GT1_cap1E_like This fa 95.5 0.031 6.7E-07 56.7 6.6 94 554-650 255-351 (359)
21 cd03823 GT1_ExpE7_like This fa 95.3 0.13 2.8E-06 52.8 10.7 87 553-642 253-342 (359)
22 cd04962 GT1_like_5 This family 95.2 0.04 8.6E-07 58.1 6.6 94 555-651 263-359 (371)
23 cd03800 GT1_Sucrose_synthase T 95.0 0.044 9.5E-07 58.1 6.4 95 554-651 294-391 (398)
24 PRK15427 colanic acid biosynth 95.0 0.14 3E-06 56.8 10.3 96 553-651 289-394 (406)
25 cd04951 GT1_WbdM_like This fam 94.9 0.14 3.1E-06 53.2 9.8 92 555-651 255-349 (360)
26 cd03807 GT1_WbnK_like This fam 94.9 0.13 2.8E-06 52.4 9.1 93 554-651 260-355 (365)
27 PRK10307 putative glycosyl tra 94.8 0.099 2.1E-06 57.1 8.5 98 553-653 294-398 (412)
28 cd03798 GT1_wlbH_like This fam 94.7 0.04 8.8E-07 55.9 4.9 96 553-651 269-365 (377)
29 cd03804 GT1_wbaZ_like This fam 94.7 0.071 1.5E-06 56.4 6.8 92 553-652 252-346 (351)
30 cd03825 GT1_wcfI_like This fam 94.3 0.063 1.4E-06 56.0 5.4 96 553-651 255-353 (365)
31 TIGR02149 glgA_Coryne glycogen 94.3 0.089 1.9E-06 56.1 6.5 97 553-652 271-376 (388)
32 cd03806 GT1_ALG11_like This fa 94.1 0.28 6E-06 54.6 10.3 96 553-652 315-416 (419)
33 KOG2619 Fucosyltransferase [Ca 93.8 0.29 6.4E-06 54.2 9.5 156 476-636 159-326 (372)
34 cd03802 GT1_AviGT4_like This f 93.7 0.29 6.3E-06 50.5 8.9 70 554-628 235-305 (335)
35 PRK09814 beta-1,6-galactofuran 93.7 0.11 2.5E-06 55.7 6.0 90 553-648 217-317 (333)
36 cd03805 GT1_ALG2_like This fam 93.5 0.2 4.3E-06 53.6 7.5 94 554-651 291-387 (392)
37 TIGR02095 glgA glycogen/starch 93.5 0.2 4.3E-06 56.2 7.8 95 554-653 357-463 (473)
38 PRK14098 glycogen synthase; Pr 93.5 0.25 5.5E-06 56.3 8.7 98 554-656 373-479 (489)
39 PRK15484 lipopolysaccharide 1, 93.5 0.17 3.6E-06 55.3 6.9 98 554-654 268-369 (380)
40 cd04955 GT1_like_6 This family 93.2 0.41 8.8E-06 50.0 9.0 93 554-652 259-354 (363)
41 PRK00654 glgA glycogen synthas 92.9 0.38 8.2E-06 54.2 8.8 96 555-655 349-455 (466)
42 cd03799 GT1_amsK_like This is 92.7 0.74 1.6E-05 47.8 10.1 95 554-651 247-350 (355)
43 cd04949 GT1_gtfA_like This fam 92.7 0.19 4.1E-06 53.5 5.8 94 555-651 271-367 (372)
44 cd03817 GT1_UGDG_like This fam 92.0 1.5 3.2E-05 45.0 11.1 91 553-647 269-361 (374)
45 cd03816 GT1_ALG1_like This fam 91.9 0.94 2E-05 50.2 10.2 120 512-644 269-399 (415)
46 TIGR03087 stp1 sugar transfera 91.6 0.25 5.4E-06 53.8 5.2 93 555-653 290-387 (397)
47 PF13524 Glyco_trans_1_2: Glyc 91.4 0.35 7.5E-06 41.8 4.9 81 566-650 2-84 (92)
48 cd03795 GT1_like_4 This family 91.4 1.2 2.7E-05 46.2 9.9 94 554-650 255-354 (357)
49 PRK14099 glycogen synthase; Pr 91.2 0.9 2E-05 51.8 9.4 97 555-656 361-472 (485)
50 cd03796 GT1_PIG-A_like This fa 91.2 0.6 1.3E-05 50.9 7.7 99 553-656 260-361 (398)
51 TIGR02472 sucr_P_syn_N sucrose 91.0 0.22 4.8E-06 55.4 4.2 95 555-652 329-430 (439)
52 cd03791 GT1_Glycogen_synthase_ 90.7 0.96 2.1E-05 50.4 8.8 94 554-652 362-466 (476)
53 PRK09922 UDP-D-galactose:(gluc 89.8 1.1 2.3E-05 48.3 8.0 72 555-628 250-321 (359)
54 cd03792 GT1_Trehalose_phosphor 89.8 0.76 1.6E-05 49.4 6.8 94 554-652 265-361 (372)
55 cd03813 GT1_like_3 This family 89.3 0.58 1.3E-05 52.8 5.8 95 554-651 362-465 (475)
56 cd04946 GT1_AmsK_like This fam 89.1 3 6.5E-05 46.1 11.0 93 555-650 301-399 (407)
57 PHA01633 putative glycosyl tra 89.1 0.42 9.2E-06 52.3 4.2 49 554-605 215-263 (335)
58 cd03811 GT1_WabH_like This fam 88.8 1.3 2.8E-05 44.6 7.3 81 555-638 256-341 (353)
59 cd03793 GT1_Glycogen_synthase_ 87.8 0.57 1.2E-05 54.8 4.4 109 554-663 466-588 (590)
60 PLN02949 transferase, transfer 86.7 1.1 2.4E-05 50.9 5.9 95 554-652 346-446 (463)
61 PHA01630 putative group 1 glyc 86.1 1.4 3E-05 47.9 6.0 41 553-594 200-240 (331)
62 PRK15490 Vi polysaccharide bio 85.1 3.7 8.1E-05 48.1 9.2 64 555-621 465-528 (578)
63 PLN02939 transferase, transfer 84.1 1.9 4E-05 53.3 6.4 98 557-658 851-962 (977)
64 KOG1387 Glycosyltransferase [C 83.7 4.3 9.2E-05 45.0 8.2 153 478-644 276-440 (465)
65 TIGR02468 sucrsPsyn_pln sucros 83.4 1.9 4.1E-05 53.8 6.1 97 555-654 560-662 (1050)
66 PLN00142 sucrose synthase 80.6 3.1 6.7E-05 50.7 6.5 97 557-656 660-764 (815)
67 PF13692 Glyco_trans_1_4: Glyc 77.0 2.7 5.9E-05 38.0 3.6 69 554-627 62-131 (135)
68 PLN02316 synthase/transferase 76.2 4 8.6E-05 51.0 5.7 96 558-657 915-1028(1036)
69 cd04950 GT1_like_1 Glycosyltra 75.9 2.8 6.2E-05 45.5 4.0 67 554-627 265-336 (373)
70 TIGR01133 murG undecaprenyldip 74.8 5.8 0.00013 41.8 5.9 82 555-641 243-333 (348)
71 cd03812 GT1_CapH_like This fam 72.3 23 0.00051 36.8 9.6 71 554-628 258-328 (358)
72 TIGR02470 sucr_synth sucrose s 71.0 6.3 0.00014 48.0 5.6 90 564-656 645-741 (784)
73 cd01635 Glycosyltransferase_GT 70.6 20 0.00043 34.1 8.0 52 538-594 161-212 (229)
74 PLN02605 monogalactosyldiacylg 69.8 17 0.00037 39.7 8.2 78 555-642 275-361 (382)
75 smart00672 CAP10 Putative lipo 68.5 33 0.00071 36.3 9.7 131 509-642 81-227 (256)
76 PF05686 Glyco_transf_90: Glyc 67.5 32 0.00069 38.6 9.8 131 509-642 155-296 (395)
77 PRK15179 Vi polysaccharide bio 63.9 30 0.00065 41.8 9.3 92 555-651 584-682 (694)
78 PRK10125 putative glycosyl tra 63.4 9.9 0.00021 42.4 4.9 68 553-624 297-364 (405)
79 COG0438 RfaG Glycosyltransfera 60.6 14 0.0003 36.5 4.9 42 554-596 268-309 (381)
80 cd03785 GT1_MurG MurG is an N- 59.4 65 0.0014 33.9 10.0 83 554-642 244-337 (350)
81 PRK13608 diacylglycerol glucos 58.8 24 0.00051 38.9 6.8 82 555-645 266-354 (391)
82 cd03788 GT1_TPS Trehalose-6-Ph 58.0 10 0.00023 42.9 4.0 86 553-643 351-442 (460)
83 PRK00726 murG undecaprenyldiph 57.3 17 0.00037 38.8 5.3 83 555-641 245-336 (357)
84 PRK05749 3-deoxy-D-manno-octul 56.3 14 0.0003 40.7 4.5 85 555-643 312-402 (425)
85 PF00919 UPF0004: Uncharacteri 54.9 15 0.00033 33.3 3.7 43 349-400 1-43 (98)
86 PLN02275 transferase, transfer 54.8 65 0.0014 35.0 9.3 94 512-614 261-358 (371)
87 TIGR02918 accessory Sec system 50.7 38 0.00082 39.1 7.0 94 555-651 385-488 (500)
88 TIGR02400 trehalose_OtsA alpha 47.5 43 0.00092 38.3 6.7 82 553-640 346-434 (456)
89 PRK00025 lpxB lipid-A-disaccha 45.8 77 0.0017 34.1 8.1 84 555-645 254-357 (380)
90 PRK13609 diacylglycerol glucos 41.3 58 0.0012 35.2 6.3 80 555-643 266-352 (380)
91 TIGR03590 PseG pseudaminic aci 35.1 93 0.002 32.9 6.5 33 554-592 233-265 (279)
92 PLN02846 digalactosyldiacylgly 32.3 1.4E+02 0.003 34.5 7.7 38 558-596 296-333 (462)
93 COG0297 GlgA Glycogen synthase 32.0 1.2E+02 0.0026 35.3 7.1 104 553-658 359-473 (487)
94 TIGR00236 wecB UDP-N-acetylglu 29.6 2.3E+02 0.005 30.4 8.6 85 538-637 255-342 (365)
95 PLN03063 alpha,alpha-trehalose 25.2 1.7E+02 0.0036 36.1 7.1 80 554-638 367-453 (797)
96 PLN02501 digalactosyldiacylgly 24.4 1.8E+02 0.0038 35.8 6.9 37 558-595 614-650 (794)
97 PF11862 DUF3382: Domain of un 24.3 45 0.00097 30.4 1.6 24 12-35 35-60 (101)
98 COG2247 LytB Putative cell wal 23.6 77 0.0017 35.0 3.5 42 555-598 125-166 (337)
99 PF13528 Glyco_trans_1_3: Glyc 23.4 1.4E+02 0.0029 31.3 5.3 112 509-629 191-318 (318)
100 KOG3185 Translation initiation 22.5 62 0.0013 33.3 2.3 32 562-593 20-51 (245)
101 PF05984 Cytomega_UL20A: Cytom 21.9 2.5E+02 0.0054 25.4 5.6 15 17-31 3-17 (100)
102 PF07038 DUF1324: Protein of u 20.6 70 0.0015 25.8 1.8 39 561-602 7-46 (59)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=1.4e-62 Score=544.80 Aligned_cols=345 Identities=41% Similarity=0.736 Sum_probs=299.3
Q ss_pred cccchhhhhhhhHhhcCCCeEEEEcCCCCCccccc--ccccccccHHHHHHHHh-cCCccccCCcCCceEEEEecchhhh
Q 005796 330 LFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQP--ILKGLYASEGWFMKLME-GNKHFAVKDPRKAHLFYMPFSSRML 406 (677)
Q Consensus 330 ~~rn~~~F~~sY~~m~~~lKVYVY~~g~~pi~h~~--~l~~iYasE~~F~~~Ll-~~S~~rT~DPeEAdLFyVP~s~~~L 406 (677)
.+++...|...|..|+..+|||+|.+|+.+.+|.+ +++++|++|++||+.|+ ..++|||.||++||+||||||+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~ 176 (464)
T KOG1021|consen 97 TSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLD 176 (464)
T ss_pred ccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecCChhhCcEEEEcceeeEe
Confidence 67888889999999999999999999988888887 89999999999999997 4578999999999999999999864
Q ss_pred h-hhhhhcCCCCchhHHHHHHHHHHHHHhcCccccccCCccEEEEeccCCCchhhhh---hhhhHhHhhhc-cCccCCCc
Q 005796 407 E-YALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRH---HMEHCIKALCN-ADVTAGFK 481 (677)
Q Consensus 407 ~-~~ly~~n~~~~~nl~~~l~~~v~~I~~~~PyWNRsgGrDHflv~~hDwg~~~tr~---~~~n~I~~L~~-ad~~~~fr 481 (677)
. ..++.++......++..+.+++..+++++|||||++|+||||++||+|++...+. ...+.|..+|+ +..+.+|.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~ 256 (464)
T KOG1021|consen 177 YNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDFRRRSDWGASISLIPEFCNGALLSLEFF 256 (464)
T ss_pred hhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchheeeccchhhHHHHHHhhCCcceeecccc
Confidence 3 3444443334456778889999999999999999999999999999999876542 23456667787 67788999
Q ss_pred cC-CccccCcccccccCCccc--cCCCCCCCCCcEEEEeccc-CCCcchHHHHHHhhcCCCCceeecCCCCC---CCChh
Q 005796 482 LG-RDVSLPETYVRSARNPLR--DLGGKPPSQRHILAFYAGN-LHGYLRPILLKYWKDKDPDMKIFGPMPPG---VASKM 554 (677)
Q Consensus 482 pg-kDVsIP~~~~~s~~~P~~--~l~~~p~s~R~iLafFaG~-~~g~vR~~L~~~w~~~~~d~~I~~~~p~g---~~~~~ 554 (677)
+. +||+||+.+.+....+.. ..++.+..+|++|+||+|+ .+|.+|+.|+++|++ +++..++..|+.| +.+..
T Consensus 257 ~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~~~iR~~L~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 335 (464)
T KOG1021|consen 257 PWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAPAGGQIRSILLDLWKK-DPDTEVFVNCPRGKVSCDRPL 335 (464)
T ss_pred cCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccccCCcHHHHHHHHhhc-CcCccccccCCCCccccCCcc
Confidence 99 999999964433333321 1234566899999999999 999999999999998 6777777777765 34578
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhH-HHHHhcCCHHHH
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNL-KDILLSIPEKKY 633 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L-~~iL~sIs~e~i 633 (677)
.|.+.|++|+|||||+|++++|+|+||||.+|||||||+|++.+||++++||++|||+|++++++++ .++|.+|+.+++
T Consensus 336 ~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~v~~~~~~iL~~i~~~~~ 415 (464)
T KOG1021|consen 336 NYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKDVPELIKNILLSIPEEEV 415 (464)
T ss_pred hHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHHhhhHHHHHHHhcCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHh-hhceeEecc--CCCCccHHHHHHHHHHHhhhccCC
Q 005796 634 FEMQFAVRK-LQRHFLWHA--KPEKYDLFHMTLHSIWYNRVYQIK 675 (677)
Q Consensus 634 ~~Mq~~v~~-v~~hFlw~~--~p~~~Daf~mtl~sIw~~Rl~~~~ 675 (677)
.+||+++.+ +++||+|+. +.+.+|||||+++++|++++.+..
T Consensus 416 ~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~~ 460 (464)
T KOG1021|consen 416 LRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLRS 460 (464)
T ss_pred HHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhccccccc
Confidence 999999995 999999999 888999999999999999986553
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=1.3e-52 Score=433.70 Aligned_cols=279 Identities=34% Similarity=0.571 Sum_probs=211.2
Q ss_pred cCCCeEEEEcCCCC----------CcccccccccccccHHHHHHHHhcCCccccCCcCCceEEEEecchhhhhhhhhhcC
Q 005796 345 DRTLKVYVYRDGKK----------PIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRN 414 (677)
Q Consensus 345 ~~~lKVYVY~~g~~----------pi~h~~~l~~iYasE~~F~~~Ll~~S~~rT~DPeEAdLFyVP~s~~~L~~~ly~~n 414 (677)
+++||||||+++.+ ...+.....++|+.|.+|++.|+ +++++|.||+|||+||||++..+..+..+..
T Consensus 2 ~~~lkVYVY~lp~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~l~-~s~~~T~dp~eAdlF~vP~~~~~~~~~~~~~- 79 (302)
T PF03016_consen 2 HRGLKVYVYPLPPKFNKDLLDPREDEQCSWYETSQYALEVILHEALL-NSPFRTDDPEEADLFFVPFYSSCYFHHWWGS- 79 (302)
T ss_pred CCCCEEEEEeCCccccccceeccccccCCCcccccchHHHHHHHHHH-hCCcEeCCHHHCeEEEEEcccccccccccCC-
Confidence 47899999998822 11233456788999999999998 4789999999999999999987642111111
Q ss_pred CCCchhHHHHHHHHHHHHHhcCccccccCCccEEEEeccCCCchhhhh---hhhhHhHhh-hccCc-cCCCccCCccccC
Q 005796 415 SHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRH---HMEHCIKAL-CNADV-TAGFKLGRDVSLP 489 (677)
Q Consensus 415 ~~~~~nl~~~l~~~v~~I~~~~PyWNRsgGrDHflv~~hDwg~~~tr~---~~~n~I~~L-~~ad~-~~~frpgkDVsIP 489 (677)
.........+..++.++++++|||||++|+||||+.+|+||.+.... ...+.+.++ +++.+ ..+|+|++||++|
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P 158 (302)
T PF03016_consen 80 -PNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIP 158 (302)
T ss_pred -ccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhheeccCCCCcCcccCCCCeecc
Confidence 11112345567778889999999999999999999999977654321 122334333 34444 5789999999999
Q ss_pred cccccccCCccccCCCCCCCCCcEEEEecccCC-------CcchHHHHHHhhcCCCCceeecCCCCCCCChhhHHHhhcc
Q 005796 490 ETYVRSARNPLRDLGGKPPSQRHILAFYAGNLH-------GYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKS 562 (677)
Q Consensus 490 ~~~~~s~~~P~~~l~~~p~s~R~iLafFaG~~~-------g~vR~~L~~~w~~~~~d~~I~~~~p~g~~~~~~Y~e~m~~ 562 (677)
+................++.+|++|++|+|+.. +.+|..|++.|++. ++..+.. ....+....+|.+.|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~ 236 (302)
T PF03016_consen 159 PFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSD-PDFRCSD-GSETCPSPSEYMELLRN 236 (302)
T ss_pred ccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccC-Ccceeee-cccccccchHHHHhccc
Confidence 853222111111123456789999999999864 35788899988763 4444321 11122345679999999
Q ss_pred ceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC
Q 005796 563 SKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI 628 (677)
Q Consensus 563 SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI 628 (677)
|+|||||+|+++++.||+|||++|||||||+|+++|||+++|||++|+|+|+++++++|+++|++|
T Consensus 237 S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~~i 302 (302)
T PF03016_consen 237 SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILRSI 302 (302)
T ss_pred CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999986
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=100.00 E-value=2e-32 Score=297.38 Aligned_cols=316 Identities=18% Similarity=0.284 Sum_probs=223.9
Q ss_pred cccchhhhhhhhHhhc--CCCeEEEEcCCCCCcccccccccccccHHHHHHHHh---cCCccccCCcCCceEEEEecchh
Q 005796 330 LFRNVSMFKRSYELMD--RTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLME---GNKHFAVKDPRKAHLFYMPFSSR 404 (677)
Q Consensus 330 ~~rn~~~F~~sY~~m~--~~lKVYVY~~g~~pi~h~~~l~~iYasE~~F~~~Ll---~~S~~rT~DPeEAdLFyVP~s~~ 404 (677)
.|+--.|| +|.+|. .+|.||||+...... | |...+|..+.+. .+.-|.|.||+.||++++-+..-
T Consensus 178 ~c~lhncf--dySRCsltSgfPVYvyd~D~~~~-------G-~~~d~~lk~~fq~t~~~n~~~ve~pd~ACiyi~lvge~ 247 (907)
T KOG2264|consen 178 PCQLHNCF--DYSRCSLTSGFPVYVYDSDIITS-------G-QSEDEWLKQVFQETIPNNVYLVETPDKACIYIHLVGEI 247 (907)
T ss_pred cccchhcc--ccccccccCCceeEEeccceeec-------c-cchHHHHHHHHHHhcccceeEeeCCCccEEEEEEeccc
Confidence 34444777 699988 899999998653221 3 444555444442 35678999999999999876431
Q ss_pred hhhhhhhhcCCCCchhHHHHHHHHHHHHHhcCccccccCCccEEEEeccCCCc-hhhhhhhhhHhHhhhccCc-cCCCcc
Q 005796 405 MLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAP-YETRHHMEHCIKALCNADV-TAGFKL 482 (677)
Q Consensus 405 ~L~~~ly~~n~~~~~nl~~~l~~~v~~I~~~~PyWNRsgGrDHflv~~hDwg~-~~tr~~~~n~I~~L~~ad~-~~~frp 482 (677)
. .+....+. .++++ =++|||. ++|+||++++.+.-.. .+.-..++.+.++++++.+ +..|||
T Consensus 248 q------~P~~l~p~--------elekl-yslp~w~-~dg~Nhvl~Nl~r~s~~~n~lyn~~t~raivvQssf~~~q~Rp 311 (907)
T KOG2264|consen 248 Q------SPVVLTPA--------ELEKL-YSLPHWR-TDGFNHVLFNLGRPSDTQNLLYNFQTGRAIVVQSSFYTVQIRP 311 (907)
T ss_pred c------CCCcCChH--------hhhhh-hcCcccc-CCCcceEEEEccCccccccceeEeccCceEEEeecceeeeecc
Confidence 0 11111111 23443 3689998 7999999998753221 1111234455667778776 778999
Q ss_pred CCccccCcccccccCCccccCCCCCCCCCcEEEEecccCCCc------chHHHHHHhhcC------CCCceeec---CCC
Q 005796 483 GRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGY------LRPILLKYWKDK------DPDMKIFG---PMP 547 (677)
Q Consensus 483 gkDVsIP~~~~~s~~~P~~~l~~~p~s~R~iLafFaG~~~g~------vR~~L~~~w~~~------~~d~~I~~---~~p 547 (677)
|+|..+|+..-.....-+..+....|.+|++|+.|+|.+... .+.-..++..+- |..+..+. .|.
T Consensus 312 gfDl~V~pv~h~~~e~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k 391 (907)
T KOG2264|consen 312 GFDLPVDPVNHIAVEKNFVELTPLVPFQRKYLITLQGKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCSFTCK 391 (907)
T ss_pred CCCcccCcccccccCccceecCcccchhhheeEEEEeeecccccccchhhhhHHHhccCCcccccccCceEEEEEeeccc
Confidence 999999874211111112334445678999999999976421 222222222110 11111111 111
Q ss_pred --C--------CCCChhhHHHhhccceEEEe-eCCCCCC-----ChhHHHHhhcCcEeEEecCCccCCCCccCCccceEE
Q 005796 548 --P--------GVASKMNYIQHMKSSKYCIC-PKGYEVN-----SPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSV 611 (677)
Q Consensus 548 --~--------g~~~~~~Y~e~m~~SkFCL~-P~G~~~~-----S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV 611 (677)
+ -|+...+..++++.|+|||+ |+|++-- -.|++||++.||||||+++...|||+|.|||.+.++
T Consensus 392 ~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWrraal 471 (907)
T KOG2264|consen 392 NQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWRRAAL 471 (907)
T ss_pred cCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHHHHhh
Confidence 1 14556678899999999996 7888532 479999999999999999999999999999999999
Q ss_pred EeccCChhhHHHHHhcCCHHHHHHHHHHHHhhhceeEeccCCCCccHHHHHHHHHHHhhhccCCCC
Q 005796 612 IIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQIKPR 677 (677)
Q Consensus 612 ~v~e~di~~L~~iL~sIs~e~i~~Mq~~v~~v~~hFlw~~~p~~~Daf~mtl~sIw~~Rl~~~~~~ 677 (677)
++|..++++++.+|+++.+.++++||| |++|+|++|++..++...|+...+|.|+ |||+|
T Consensus 472 ~lPkaR~tE~HFllrs~~dsDll~mRR-----qGRl~wEtYls~~~~~~~tvlA~lR~rl-qIP~r 531 (907)
T KOG2264|consen 472 RLPKARLTEAHFLLRSFEDSDLLEMRR-----QGRLFWETYLSDRHLLARTVLAALRYRL-QIPTR 531 (907)
T ss_pred hCCccccchHHHHHHhcchhhHHHHHh-----hhhhhHHHHhhHHHHHHHHHHHHHHHhh-CCCCc
Confidence 999999999999999999999999998 4589999999999999999999999999 99986
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.94 E-value=1.8e-26 Score=250.94 Aligned_cols=333 Identities=19% Similarity=0.164 Sum_probs=238.3
Q ss_pred HhhcccccCCcccccccccchhhhh----hhhHhhcCCCeEEEEcCCCCCcccccc-cccccccHHHHHHHHhc--CCcc
Q 005796 314 IEKASVSVSDQELHAPLFRNVSMFK----RSYELMDRTLKVYVYRDGKKPIFHQPI-LKGLYASEGWFMKLMEG--NKHF 386 (677)
Q Consensus 314 i~~a~~~~~d~~~~~~~~rn~~~F~----~sY~~m~~~lKVYVY~~g~~pi~h~~~-l~~iYasE~~F~~~Ll~--~S~~ 386 (677)
|.+++.+.+..+..++.-++++||- ..|+|...++|||+|..++.-- .... ....++.| +.+++++ .|.|
T Consensus 61 i~d~~~v~~pa~~p~~e~g~~sc~~~dcf~~y~c~~~~~KvyIy~l~~~vd-~~s~~~~~T~s~e--y~~lleA~~~S~y 137 (691)
T KOG1022|consen 61 ISDAWPVTNPAITPASETGLPSCFLADCFLYYQCLFFETKVYIYMLGDIVD-AKSIDKGATWSPE--YIALLEAWHLSFY 137 (691)
T ss_pred cccCccccccccCcccccCCccceehhhhhhhhccccccceeEEehhhhhh-hhcccccccccHH--HHHHHHHHHhccc
Confidence 7788877766666555556665544 5899988999999999875211 1111 11234555 6666654 5889
Q ss_pred ccCCcCCceEEEEecchhhhhhhhhhcCCCCchhHHHHHHHHHHHHHhcCccccccCCccEEEEeccCC--Cchhhhhhh
Q 005796 387 AVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDW--APYETRHHM 464 (677)
Q Consensus 387 rT~DPeEAdLFyVP~s~~~L~~~ly~~n~~~~~nl~~~l~~~v~~I~~~~PyWNRsgGrDHflv~~hDw--g~~~tr~~~ 464 (677)
+|.||++||+|.+.... +.. | .++ ......++++.-.|.| |.||..|..-.- +.|++..+.
T Consensus 138 yt~n~N~aclf~Ps~d~--lnQ-----n-----~l~---~kl~~~ala~l~~wdr--g~nH~~fnmLpGg~p~yntaldv 200 (691)
T KOG1022|consen 138 YTFNYNGACLFMPSSDE--LNQ-----N-----PLS---WKLEKVALAKLLVWDR--GVNHEGFNMLPGGDPTYNTALDV 200 (691)
T ss_pred eecCCCceEEEecchhh--hcc-----C-----cch---HHHHHHHHhcccchhc--ccceeeEeeccCCCCCccccccC
Confidence 99999999999875432 211 1 111 1223456778889999 999999976443 346665443
Q ss_pred hhHhHhhhccCc-cCCCccCCccccCcccccccCCccccCCCCCCCCCcEEEEec-ccCCCcchHHHHHHhhcCCCCcee
Q 005796 465 EHCIKALCNADV-TAGFKLGRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYA-GNLHGYLRPILLKYWKDKDPDMKI 542 (677)
Q Consensus 465 ~n~I~~L~~ad~-~~~frpgkDVsIP~~~~~s~~~P~~~l~~~p~s~R~iLafFa-G~~~g~vR~~L~~~w~~~~~d~~I 542 (677)
..--+++..+.+ ++.||+|+||.||...+..... ...-+..|..++--+ -+.+.++|..|.+....+......
T Consensus 201 ~~d~a~~~gggf~tW~yr~g~dv~ipv~Sp~~v~~-----~~~~~g~r~~~l~~~q~n~~pr~r~~l~el~~kh~e~~l~ 275 (691)
T KOG1022|consen 201 GQDEAWYSGGGFGTWKYRKGNDVYIPVRSPGNVGR-----AFLYDGSRYRVLQDCQENYGPRIRVSLIELLSKHEERELE 275 (691)
T ss_pred CcceeEEecCCcCcccccCCCccccccccccccCc-----cccCCccceeeeeccccccchHhHHhHHHHHhhccceEEe
Confidence 322223444455 6779999999999843221111 122345666544444 456667888777765544444444
Q ss_pred ecCCCC------C-C--CChhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEe
Q 005796 543 FGPMPP------G-V--ASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVII 613 (677)
Q Consensus 543 ~~~~p~------g-~--~~~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v 613 (677)
.+.|-+ + + +...+|++.+...+||+.-||.+.+++.+++-+++||+|||+.|.|.+||.+|+||...||++
T Consensus 276 l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~~aSv~~ 355 (691)
T KOG1022|consen 276 LPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWIVASVWC 355 (691)
T ss_pred cchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhhceeeeEEe
Confidence 443311 1 1 123579999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHhcCCHHHHHHHHHHHHhhhceeEeccCCCCccHHHHHHHHHHHhhhccCCC
Q 005796 614 AEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQIKP 676 (677)
Q Consensus 614 ~e~di~~L~~iL~sIs~e~i~~Mq~~v~~v~~hFlw~~~p~~~Daf~mtl~sIw~~Rl~~~~~ 676 (677)
+|..+..+.++|++|+...+-+||.| +...|..+++.+-..-.++.+.+..|++++-+
T Consensus 356 ~e~~~~~v~~~l~~i~~~~i~sl~~r-----~~~~rl~rf~~~~~~~l~~~~~i~~~llp~v~ 413 (691)
T KOG1022|consen 356 MEYYAGKVMDALLNIETAGICSLQLR-----RIGSRLNRFPPFKRGFLLLLSSIGKRLLPVVA 413 (691)
T ss_pred ehhhHHHHHHHhhcchhcchhhhhhh-----hhhhhHhhcchHHHHHHHHHHHHhhhhhheee
Confidence 99999999999999999999999874 46677888988888888889999999987654
No 5
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=97.36 E-value=0.00043 Score=75.43 Aligned_cols=154 Identities=14% Similarity=0.226 Sum_probs=73.6
Q ss_pred ccCCCccCCccccCcccccccCCccc--cCCCCCCCCCcEEEEecccCCCc-chHHHHHHhhcCCCCceeecCCC-CCCC
Q 005796 476 VTAGFKLGRDVSLPETYVRSARNPLR--DLGGKPPSQRHILAFYAGNLHGY-LRPILLKYWKDKDPDMKIFGPMP-PGVA 551 (677)
Q Consensus 476 ~~~~frpgkDVsIP~~~~~s~~~P~~--~l~~~p~s~R~iLafFaG~~~g~-vR~~L~~~w~~~~~d~~I~~~~p-~g~~ 551 (677)
++-+||..-||.+|+.+......+.. .+......+++..++++.++... .|..+.+.+... -.+.++|.|. ....
T Consensus 138 ~TMTYr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~~~~~R~~~~~~L~~~-~~vd~yG~c~~~~~~ 216 (349)
T PF00852_consen 138 WTMTYRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCNPHSGREEYVRELSKY-IPVDSYGKCGNNNPC 216 (349)
T ss_dssp -----------------------------------TSSEEEEE--S-S--H-HHHHHHHHHHTT-S-EEE-SSTT--SSS
T ss_pred cccccccccccccccccccccccccccccccccccCCCceEEEEeeCcCCcccHHHHHHHHHhh-cCeEccCCCCCCCCc
Confidence 34578988999999854322111111 11111223445677777776532 487777777765 4678899983 2222
Q ss_pred ChhhHHHhhccceEEEeeC---CCCCCChhHHHHhhcCcEeEEec--C-Cc--cCCCCccCCccceEEEeccCChhhHHH
Q 005796 552 SKMNYIQHMKSSKYCICPK---GYEVNSPRVVESIFYECVPVIIS--D-NF--VPPFYEVLNWEAFSVIIAEENIPNLKD 623 (677)
Q Consensus 552 ~~~~Y~e~m~~SkFCL~P~---G~~~~S~RL~EAl~~GCIPVIis--D-~~--~LPF~dvLDW~~fsV~v~e~di~~L~~ 623 (677)
....+.+.+++-+|.|+.. ....-+--|++|+.+|||||+++ . ++ .+|=...|+.++|. ...+|.+
T Consensus 217 ~~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df~------s~~~La~ 290 (349)
T PF00852_consen 217 PRDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDFK------SPKELAD 290 (349)
T ss_dssp --S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGSS------SHHHHHH
T ss_pred ccccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcCC------CHHHHHH
Confidence 3345889999999999863 23445789999999999999999 3 22 25547777777763 4567888
Q ss_pred HHhcCC--HHHHHHH
Q 005796 624 ILLSIP--EKKYFEM 636 (677)
Q Consensus 624 iL~sIs--~e~i~~M 636 (677)
.|+.+. ++.|.+.
T Consensus 291 yl~~l~~n~~~Y~~y 305 (349)
T PF00852_consen 291 YLKYLDKNDELYNKY 305 (349)
T ss_dssp HHHHHHT-HHHHH--
T ss_pred HHHHHhcCHHHHhhh
Confidence 888774 5555543
No 6
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=96.90 E-value=0.005 Score=62.10 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=72.3
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CH
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PE 630 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~ 630 (677)
..++.+.|..|.++++|.-.+.....++||+++|| |||.++. ..+.+.+.-....+.++..+..++.+.|..+ .+
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP 342 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh
Confidence 35788999999999999876666788999999998 6676665 3456667667778888888777777777664 46
Q ss_pred HHHHHHHHHHH-hhhceeEecc
Q 005796 631 KKYFEMQFAVR-KLQRHFLWHA 651 (677)
Q Consensus 631 e~i~~Mq~~v~-~v~~hFlw~~ 651 (677)
+...+|.++.+ .+.+.|-|+.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~ 364 (374)
T cd03801 343 ELRRRLGEAARERVAERFSWDR 364 (374)
T ss_pred HHHHHHHHHHHHHHHHhcCHHH
Confidence 66778887765 5566666654
No 7
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=96.63 E-value=0.0076 Score=67.40 Aligned_cols=115 Identities=15% Similarity=0.134 Sum_probs=86.4
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCc---cceEEEeccCChhhHHHHHhcC--
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNW---EAFSVIIAEENIPNLKDILLSI-- 628 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW---~~fsV~v~e~di~~L~~iL~sI-- 628 (677)
.+..+.|+.+..+++|...+....-++|||++| +|||.++.- ...++++= ....+.++..+...+.+.|..+
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~g--g~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~ 399 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAG--GIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLA 399 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCC--CcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 578899999999999988877778899999999 899988743 23455532 6778888888888777666555
Q ss_pred CHHHHHHHHHHHHhhhceeEeccCCCCccH-HHHHHHHHHHhhh
Q 005796 629 PEKKYFEMQFAVRKLQRHFLWHAKPEKYDL-FHMTLHSIWYNRV 671 (677)
Q Consensus 629 s~e~i~~Mq~~v~~v~~hFlw~~~p~~~Da-f~mtl~sIw~~Rl 671 (677)
.++...+|.++.++....|-|+.....+-+ ..-.+..-|++|-
T Consensus 400 ~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~~~~~ 443 (465)
T PLN02871 400 DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFWRKKR 443 (465)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888888776677888877666643 4555555677763
No 8
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=96.54 E-value=0.012 Score=60.24 Aligned_cols=93 Identities=18% Similarity=0.326 Sum_probs=62.6
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
.+..+.|..+.++++|.-.+.....++|||++|| |||.++.- +..+.+.- ...+.++.+ ...+.+.+..+ .++
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~~~~~~-~~~~~~~~~-~~~~~~~i~~l~~~~~ 347 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKV--PWQELIEY-GCGWVVDDD-VDALAAALRRALELPQ 347 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCC--CHHHHhhc-CceEEeCCC-hHHHHHHHHHHHhCHH
Confidence 4677889999999999877667788999999997 77877743 23343322 444444443 24444444433 246
Q ss_pred HHHHHHHHHHhh-hceeEecc
Q 005796 632 KYFEMQFAVRKL-QRHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~v-~~hFlw~~ 651 (677)
...+|.++.++. +++|-|+.
T Consensus 348 ~~~~~~~~~~~~~~~~~s~~~ 368 (375)
T cd03821 348 RLKAMGENGRALVEERFSWTA 368 (375)
T ss_pred HHHHHHHHHHHHHHHhcCHHH
Confidence 778888877665 77777764
No 9
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.51 E-value=0.0055 Score=63.10 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=69.7
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CH
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PE 630 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~ 630 (677)
..+..+.|+.+.+|++|.+.+.....++|||++|| |||.++.-- +.+++.=....+.++..+...+.+.+..+ .+
T Consensus 257 ~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 257 GEELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEAFAAALAALLADP 333 (364)
T ss_pred HHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH
Confidence 35677899999999999888777789999999999 788887432 34445334566777777776555555554 47
Q ss_pred HHHHHHHHHHHhhhceeEecc
Q 005796 631 KKYFEMQFAVRKLQRHFLWHA 651 (677)
Q Consensus 631 e~i~~Mq~~v~~v~~hFlw~~ 651 (677)
+.+.+|+++..+...+|-|+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~ 354 (364)
T cd03814 334 ELRRRMAARARAEAERRSWEA 354 (364)
T ss_pred HHHHHHHHHHHHHHhhcCHHH
Confidence 788888887766655565544
No 10
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=96.46 E-value=0.018 Score=59.00 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=67.1
Q ss_pred hhhHHHhhccceEEEeeCCCCCC-----ChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVN-----SPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS 627 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~-----S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s 627 (677)
..++.+.|+.+.++++|...+.. ...++||+.+|| |||.++.-.. .+.+.=....+.++..+...+.+.|..
T Consensus 285 ~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~i~~ 361 (394)
T cd03794 285 KEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGES--AELVEEAGAGLVVPPGDPEALAAAILE 361 (394)
T ss_pred hHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCc--hhhhccCCcceEeCCCCHHHHHHHHHH
Confidence 34678899999999999776543 456899999997 7787765332 222222256677777788777777766
Q ss_pred C--CHHHHHHHHHHHHhhhc-eeEecc
Q 005796 628 I--PEKKYFEMQFAVRKLQR-HFLWHA 651 (677)
Q Consensus 628 I--s~e~i~~Mq~~v~~v~~-hFlw~~ 651 (677)
+ .++++.+|.++.++... +|-|+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~s~~~ 388 (394)
T cd03794 362 LLDDPEERAEMGENGRRYVEEKFSREK 388 (394)
T ss_pred HHhChHHHHHHHHHHHHHHHHhhcHHH
Confidence 6 67888888777655443 676654
No 11
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=96.32 E-value=0.0072 Score=60.99 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=70.4
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
.+..+.|+++.+++.|...+.....++|||++||.+| .++....+ +++++-....+.++..++.++.+.+..+ .++
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi-~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~ 321 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVI-SFDCPTGP-SEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE 321 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEE-EecCCCch-HhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 5677999999999999877666788999999999654 55432222 2344444567777888877777776666 577
Q ss_pred HHHHHHHHHHhhhceeEecc
Q 005796 632 KYFEMQFAVRKLQRHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~v~~hFlw~~ 651 (677)
...+|.++.++..+.|-|+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~ 341 (348)
T cd03820 322 LRKRMGANARESAERFSIEN 341 (348)
T ss_pred HHHHHHHHHHHHHHHhCHHH
Confidence 88889888877777777765
No 12
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=96.31 E-value=0.0083 Score=61.97 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=70.1
Q ss_pred hhhHHHhhccceEEEeeCCCC--CCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--
Q 005796 553 KMNYIQHMKSSKYCICPKGYE--VNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI-- 628 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~--~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI-- 628 (677)
..+..+.|+.+.+++.|..++ ..+..+.|||++|| |||.++.-- .+.+.+. ...+.++..+..++.+.|..+
T Consensus 258 ~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~~-~~g~~~~~~d~~~~~~~l~~l~~ 333 (366)
T cd03822 258 DEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLDG-GTGLLVPPGDPAALAEAIRRLLA 333 (366)
T ss_pred HHHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeeeC-CCcEEEcCCCHHHHHHHHHHHHc
Confidence 346789999999999998777 77788999999999 999887433 3333343 345667777777666666554
Q ss_pred CHHHHHHHHHHHHhhhceeEeccC
Q 005796 629 PEKKYFEMQFAVRKLQRHFLWHAK 652 (677)
Q Consensus 629 s~e~i~~Mq~~v~~v~~hFlw~~~ 652 (677)
.++...+|+++.++..+.|-|+..
T Consensus 334 ~~~~~~~~~~~~~~~~~~~s~~~~ 357 (366)
T cd03822 334 DPELAQALRARAREYARAMSWERV 357 (366)
T ss_pred ChHHHHHHHHHHHHHHhhCCHHHH
Confidence 346788898888776666776654
No 13
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.21 E-value=0.0065 Score=57.54 Aligned_cols=84 Identities=20% Similarity=0.225 Sum_probs=57.4
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcCC--HH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIP--EK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs--~e 631 (677)
.+..+.++.+.+.++|...+..+.-++|||.+|| |||+++ .-.+.+++.=..-.+.++..++.++.+.+..+- ++
T Consensus 84 ~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~--~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~~~ 160 (172)
T PF00534_consen 84 DELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASD--IGGNNEIINDGVNGFLFDPNDIEELADAIEKLLNDPE 160 (172)
T ss_dssp HHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEES--STHHHHHSGTTTSEEEESTTSHHHHHHHHHHHHHHHH
T ss_pred cccccccccceecccccccccccccccccccccc-ceeecc--ccCCceeeccccceEEeCCCCHHHHHHHHHHHHCCHH
Confidence 4788999999999999998888999999999999 666676 233334442222456666668887777777664 34
Q ss_pred HHHHHHHHH
Q 005796 632 KYFEMQFAV 640 (677)
Q Consensus 632 ~i~~Mq~~v 640 (677)
...+|+++.
T Consensus 161 ~~~~l~~~~ 169 (172)
T PF00534_consen 161 LRQKLGKNA 169 (172)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 456666554
No 14
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.10 E-value=0.036 Score=58.35 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=66.7
Q ss_pred hhHHHhhccceEEEeeCCC------CCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc
Q 005796 554 MNYIQHMKSSKYCICPKGY------EVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS 627 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~------~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s 627 (677)
.+..+.|+.+..+++|.-. +.....++|||++|| |||.++.-. ..+.+.=....+.++..+..++.+.|..
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~ 332 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGG--IPEAVEDGETGLLVPEGDVAALAAALGR 332 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCC--chhheecCCeeEEECCCCHHHHHHHHHH
Confidence 4677889999998887532 223578999999997 999888643 3354544566778888888777666655
Q ss_pred C--CHHHHHHHHHHHHh-hhceeEeccC
Q 005796 628 I--PEKKYFEMQFAVRK-LQRHFLWHAK 652 (677)
Q Consensus 628 I--s~e~i~~Mq~~v~~-v~~hFlw~~~ 652 (677)
+ .++...+|.++.++ ++++|-|+..
T Consensus 333 l~~~~~~~~~~~~~a~~~~~~~~s~~~~ 360 (367)
T cd05844 333 LLADPDLRARMGAAGRRRVEERFDLRRQ 360 (367)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 4 35667778776644 4567777653
No 15
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=95.94 E-value=0.042 Score=59.69 Aligned_cols=105 Identities=18% Similarity=0.202 Sum_probs=72.6
Q ss_pred CceeecCCCCCCCChhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCCh
Q 005796 539 DMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENI 618 (677)
Q Consensus 539 d~~I~~~~p~g~~~~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di 618 (677)
.+.+.+..+ ..++.+.|+.+..|+.|.-.+..+.-++|||++|| |||.++. -+..+++.-..-.+.++..+.
T Consensus 282 ~V~f~G~v~-----~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~--~g~~e~i~~~~~G~lv~~~d~ 353 (396)
T cd03818 282 RVHFLGRVP-----YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDT--APVREVITDGENGLLVDFFDP 353 (396)
T ss_pred eEEEeCCCC-----HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCC--CCchhhcccCCceEEcCCCCH
Confidence 455555432 34788999999999988655555567999999999 8888774 355677765666778888887
Q ss_pred hhHHHHHhcC--CHHHHHHHHHHHHh-hhceeEecc
Q 005796 619 PNLKDILLSI--PEKKYFEMQFAVRK-LQRHFLWHA 651 (677)
Q Consensus 619 ~~L~~iL~sI--s~e~i~~Mq~~v~~-v~~hFlw~~ 651 (677)
..|.+.+..+ .++...+|.++.++ +.++|-|+.
T Consensus 354 ~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~ 389 (396)
T cd03818 354 DALAAAVIELLDDPARRARLRRAARRTALRYDLLSV 389 (396)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHH
Confidence 7666655544 35667778776654 444577654
No 16
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=95.85 E-value=0.04 Score=56.85 Aligned_cols=93 Identities=16% Similarity=0.153 Sum_probs=68.5
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc-C-CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS-I-PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s-I-s~e 631 (677)
.+..+.|+.+.+++.|.-.+..+.-++|||++|| |||.++.- .+.+.+ ....+.++..+...+.+.|.. + .++
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~--~~~e~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~ 338 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNIS--SLPEVA--GDAALYFDPLDPEALAAAIERLLEDPA 338 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCC--Ccccee--cCceeeeCCCCHHHHHHHHHHHhcCHH
Confidence 4678899999999998655555677999999997 77777642 233444 345667777787777777766 3 467
Q ss_pred HHHHHHHHHHhhhceeEecc
Q 005796 632 KYFEMQFAVRKLQRHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~v~~hFlw~~ 651 (677)
...+|.++.+++..+|-|+.
T Consensus 339 ~~~~~~~~~~~~~~~~sw~~ 358 (365)
T cd03809 339 LREELRERGLARAKRFSWEK 358 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHH
Confidence 77888888877777887765
No 17
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=95.79 E-value=0.044 Score=59.30 Aligned_cols=97 Identities=12% Similarity=0.129 Sum_probs=68.1
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
.+..+.|+.+..|+.|.=.+....-++|||++|| |||.++.- ...+++.=....+.++..+...+.+.+..+ .++
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~ 370 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVG--GLPVAVADGETGLLVDGHDPADWADALARLLDDPR 370 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCC--CcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHH
Confidence 4678999999999988655555678999999997 88887742 233445334456677777777665555443 456
Q ss_pred HHHHHHHHHHhhhceeEeccCC
Q 005796 632 KYFEMQFAVRKLQRHFLWHAKP 653 (677)
Q Consensus 632 ~i~~Mq~~v~~v~~hFlw~~~p 653 (677)
...+|+++.++..++|-|+...
T Consensus 371 ~~~~~~~~~~~~~~~fsw~~~~ 392 (405)
T TIGR03449 371 TRIRMGAAAVEHAAGFSWAATA 392 (405)
T ss_pred HHHHHHHHHHHHHHhCCHHHHH
Confidence 7788888777666677777644
No 18
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.77 E-value=0.039 Score=58.93 Aligned_cols=97 Identities=15% Similarity=0.061 Sum_probs=69.0
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
.+..+.|+.+.++++|.-.+....-++|||++|| |||.+|.- ...+++.-......++..+..++.+.|..+ .++
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~--g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 340 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVG--GNPELVQHGVTGALVPPGDAVALARALQPYVSDPA 340 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCC--CcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHH
Confidence 4678899999999988665656678999999996 99998853 345666556667788888887776666554 355
Q ss_pred HHHHHHHHHHh-hhceeEeccCC
Q 005796 632 KYFEMQFAVRK-LQRHFLWHAKP 653 (677)
Q Consensus 632 ~i~~Mq~~v~~-v~~hFlw~~~p 653 (677)
...+|.++.++ +..+|-|+...
T Consensus 341 ~~~~~~~~a~~~~~~~fs~~~~~ 363 (374)
T TIGR03088 341 ARRAHGAAGRARAEQQFSINAMV 363 (374)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHH
Confidence 66667655543 35677776543
No 19
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=95.50 E-value=0.032 Score=58.20 Aligned_cols=94 Identities=15% Similarity=0.103 Sum_probs=68.2
Q ss_pred hhHHHhhccceEEEeeC-CCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHh-cC--C
Q 005796 554 MNYIQHMKSSKYCICPK-GYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILL-SI--P 629 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~-G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~-sI--s 629 (677)
.+..+.|+.|..+++|. -.+....-++|||++|| |||+++. -+..+.+.-....+.++..+...+.+.|. .+ .
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 331 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDH--GGARETVRPGETGLLVPPGDAEALAQALDQILSLL 331 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCC--CCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhC
Confidence 46789999999999986 34444578999999999 7787773 35566676666677788888888777763 22 5
Q ss_pred HHHHHHHHHHHHh-hhceeEec
Q 005796 630 EKKYFEMQFAVRK-LQRHFLWH 650 (677)
Q Consensus 630 ~e~i~~Mq~~v~~-v~~hFlw~ 650 (677)
+++..+|+++.++ +..+|.|+
T Consensus 332 ~~~~~~~~~~a~~~~~~~f~~~ 353 (355)
T cd03819 332 PEGRAKMFAKARMCVETLFSYD 353 (355)
T ss_pred HHHHHHHHHHHHHHHHHhhhhc
Confidence 7788888776644 34566554
No 20
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=95.46 E-value=0.031 Score=56.68 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=65.0
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
.+..+.|+.+.+|++|...+.....++|||.+|| |||.++.-. ..+.+.=....+.++..+...+.+.+..+ .++
T Consensus 255 ~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~--~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~ 331 (359)
T cd03808 255 DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPG--CREAVIDGVNGFLVPPGDAEALADAIERLIEDPE 331 (359)
T ss_pred ccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCC--chhhhhcCcceEEECCCCHHHHHHHHHHHHhCHH
Confidence 3567899999999999877767788999999996 777776432 23444323456677777777666666554 466
Q ss_pred HHHHHHHHHHhh-hceeEec
Q 005796 632 KYFEMQFAVRKL-QRHFLWH 650 (677)
Q Consensus 632 ~i~~Mq~~v~~v-~~hFlw~ 650 (677)
.+.+|.++.++. ..+|-|+
T Consensus 332 ~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 332 LRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred HHHHHHHHHHHHHHHhcCHH
Confidence 777777666544 5555554
No 21
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=95.35 E-value=0.13 Score=52.76 Aligned_cols=87 Identities=14% Similarity=0.077 Sum_probs=63.0
Q ss_pred hhhHHHhhccceEEEeeCC-CCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--C
Q 005796 553 KMNYIQHMKSSKYCICPKG-YEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--P 629 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G-~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s 629 (677)
..+..+.|+.+..|++|.- .+.....++|||++| +|||.++.- ...+.++.....+.++..+...+.+.+..+ .
T Consensus 253 ~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 253 QEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLIDD 329 (359)
T ss_pred HHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC
Confidence 3577889999999999964 355667899999999 677777632 345666666678888888777666655544 4
Q ss_pred HHHHHHHHHHHHh
Q 005796 630 EKKYFEMQFAVRK 642 (677)
Q Consensus 630 ~e~i~~Mq~~v~~ 642 (677)
++...+|+++.++
T Consensus 330 ~~~~~~~~~~~~~ 342 (359)
T cd03823 330 PDLLERLRAGIEP 342 (359)
T ss_pred hHHHHHHHHhHHH
Confidence 6777788776644
No 22
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.19 E-value=0.04 Score=58.07 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=69.0
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHHH
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEKK 632 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e~ 632 (677)
+..+.|+.+..|++|.-.+....-++|||.+| +|||.++.- ...+++.-..-...++..+..++.+.+..+ .++.
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~--~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~ 339 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAG--GIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDEL 339 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCC--CchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHH
Confidence 57789999999999976666667899999999 688888753 344666554555667777777766655544 5778
Q ss_pred HHHHHHHHHhh-hceeEecc
Q 005796 633 YFEMQFAVRKL-QRHFLWHA 651 (677)
Q Consensus 633 i~~Mq~~v~~v-~~hFlw~~ 651 (677)
+.+|+++.++. ..+|-|+.
T Consensus 340 ~~~~~~~~~~~~~~~fs~~~ 359 (371)
T cd04962 340 WQEFSRAARNRAAERFDSER 359 (371)
T ss_pred HHHHHHHHHHHHHHhCCHHH
Confidence 88998888765 66676654
No 23
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=95.03 E-value=0.044 Score=58.12 Aligned_cols=95 Identities=11% Similarity=0.102 Sum_probs=68.3
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
.+..+.++.+..+++|.-.+....-++|||++|+ |||.++.- ...+.+.=....+.++..+...+.+.+..+ .++
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~-Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~ 370 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACGL-PVVATAVG--GPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPA 370 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcCC-CEEECCCC--CHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHH
Confidence 4677889999999999776666678999999995 99988742 344555434567777777777666655544 467
Q ss_pred HHHHHHHHHHhhh-ceeEecc
Q 005796 632 KYFEMQFAVRKLQ-RHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~v~-~hFlw~~ 651 (677)
.+.+|+++.++.. ++|-|+.
T Consensus 371 ~~~~~~~~a~~~~~~~~s~~~ 391 (398)
T cd03800 371 LRRRLSRAGLRRARARYTWER 391 (398)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 7888887775543 7777764
No 24
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=94.99 E-value=0.14 Score=56.76 Aligned_cols=96 Identities=11% Similarity=0.104 Sum_probs=67.5
Q ss_pred hhhHHHhhccceEEEeeCCC------CCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHh
Q 005796 553 KMNYIQHMKSSKYCICPKGY------EVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILL 626 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~------~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~ 626 (677)
..+..+.|+.+..+++|.=. +....-++|||++|| |||.++.--. .+++.=..-.+.++..|...|.+.+.
T Consensus 289 ~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~-PVI~t~~~g~--~E~v~~~~~G~lv~~~d~~~la~ai~ 365 (406)
T PRK15427 289 SHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGI-PVVSTLHSGI--PELVEADKSGWLVPENDAQALAQRLA 365 (406)
T ss_pred HHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCC-CEEEeCCCCc--hhhhcCCCceEEeCCCCHHHHHHHHH
Confidence 34678999999999988421 223466999999996 9998875332 35554455677788888887777776
Q ss_pred cC---CHHHHHHHHHHHHh-hhceeEecc
Q 005796 627 SI---PEKKYFEMQFAVRK-LQRHFLWHA 651 (677)
Q Consensus 627 sI---s~e~i~~Mq~~v~~-v~~hFlw~~ 651 (677)
.+ +++...+|.++.++ +..+|-|+.
T Consensus 366 ~l~~~d~~~~~~~~~~ar~~v~~~f~~~~ 394 (406)
T PRK15427 366 AFSQLDTDELAPVVKRAREKVETDFNQQV 394 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 55 56778888877653 456676654
No 25
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=94.93 E-value=0.14 Score=53.17 Aligned_cols=92 Identities=14% Similarity=0.157 Sum_probs=60.0
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC---CHH
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI---PEK 631 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI---s~e 631 (677)
+..+.|+.+.+.++|...+.....++|||.+|| |||.+|.- ...+.+. .....++..+...+.+.+..+ +++
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~--~~g~~~~~~~~~~~~~~i~~ll~~~~~ 329 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAG--GVREVVG--DSGLIVPISDPEALANKIDEILKMSGE 329 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCC--ChhhEec--CCceEeCCCCHHHHHHHHHHHHhCCHH
Confidence 567889999999999877766788999999999 88887742 2233332 134455666766655555544 455
Q ss_pred HHHHHHHHHHhhhceeEecc
Q 005796 632 KYFEMQFAVRKLQRHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~v~~hFlw~~ 651 (677)
....|..+-..+.+.|-|+.
T Consensus 330 ~~~~~~~~~~~~~~~~s~~~ 349 (360)
T cd04951 330 ERDIIGARRERIVKKFSINS 349 (360)
T ss_pred HHHHHHHHHHHHHHhcCHHH
Confidence 55555554334555666543
No 26
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=94.86 E-value=0.13 Score=52.42 Aligned_cols=93 Identities=12% Similarity=0.093 Sum_probs=62.9
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
.+..+.|+.+.++++|...+..+.-++|||.+|| |||.++.-. ..+.+. ...+.++..+..++.+.+..+ .++
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~--~~e~~~--~~g~~~~~~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGD--NAELVG--DTGFLVPPGDPEALAEAIEALLADPA 334 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCC--hHHHhh--cCCEEeCCCCHHHHHHHHHHHHhChH
Confidence 3567899999999999888777788999999997 777776422 223331 155667766766666555544 346
Q ss_pred HHHHHHHHHHh-hhceeEecc
Q 005796 632 KYFEMQFAVRK-LQRHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~-v~~hFlw~~ 651 (677)
++.+|.++.++ ++++|-|+.
T Consensus 335 ~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 335 LRQALGEAARERIEENFSIEA 355 (365)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 66777665543 455677654
No 27
>PRK10307 putative glycosyl transferase; Provisional
Probab=94.81 E-value=0.099 Score=57.08 Aligned_cols=98 Identities=8% Similarity=0.054 Sum_probs=69.5
Q ss_pred hhhHHHhhccceEEEeeCCCCC----CChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC
Q 005796 553 KMNYIQHMKSSKYCICPKGYEV----NSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI 628 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~----~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI 628 (677)
..+..+.|+.+..|++|.=.+. ....++|||++| +|||.++.--..+.+++. ...+.++..++.+|.+.|..+
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l 370 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAAL 370 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHH
Confidence 3567889999999998853332 234589999999 588887743233445666 467788888888888887766
Q ss_pred --CHHHHHHHHHHHHh-hhceeEeccCC
Q 005796 629 --PEKKYFEMQFAVRK-LQRHFLWHAKP 653 (677)
Q Consensus 629 --s~e~i~~Mq~~v~~-v~~hFlw~~~p 653 (677)
.++...+|+++.++ ++++|-|+.-.
T Consensus 371 ~~~~~~~~~~~~~a~~~~~~~fs~~~~~ 398 (412)
T PRK10307 371 ARQALLRPKLGTVAREYAERTLDKENVL 398 (412)
T ss_pred HhCHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 45677888887765 56688887644
No 28
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=94.70 E-value=0.04 Score=55.94 Aligned_cols=96 Identities=14% Similarity=0.146 Sum_probs=63.8
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcCC-HH
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIP-EK 631 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs-~e 631 (677)
..+..+.+.++.+|++|...+.....++||+.+|| |||.++.- ...+.+.-....+.+...+..++.+.|..+- +.
T Consensus 269 ~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~--~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 269 HEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVG--GIPEIITDGENGLLVPPGDPEALAEAILRLLADP 345 (377)
T ss_pred HHHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCC--ChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCc
Confidence 34677999999999999877777788999999999 66766642 2334454455556777777776555555442 22
Q ss_pred HHHHHHHHHHhhhceeEecc
Q 005796 632 KYFEMQFAVRKLQRHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~v~~hFlw~~ 651 (677)
+....+++...+.++|-|+.
T Consensus 346 ~~~~~~~~~~~~~~~~s~~~ 365 (377)
T cd03798 346 WLRLGRAARRRVAERFSWEN 365 (377)
T ss_pred HHHHhHHHHHHHHHHhhHHH
Confidence 22334444555666776664
No 29
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=94.68 E-value=0.071 Score=56.40 Aligned_cols=92 Identities=12% Similarity=0.025 Sum_probs=57.9
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcCCH--
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPE-- 630 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs~-- 630 (677)
..+..+.|+.+..+++|.- +....-++|||++|| |||.++.-- ..+++.=....+.++..+...|.+.+..+-.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-Pvi~~~~~~--~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-PVIAYGKGG--ALETVIDGVTGILFEEQTVESLAAAVERFEKNE 327 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-CEEEeCCCC--CcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCc
Confidence 3467899999999998865 444566899999998 999887432 2344432345777777777666555554421
Q ss_pred -HHHHHHHHHHHhhhceeEeccC
Q 005796 631 -KKYFEMQFAVRKLQRHFLWHAK 652 (677)
Q Consensus 631 -e~i~~Mq~~v~~v~~hFlw~~~ 652 (677)
+...+|++ ..++|.|+..
T Consensus 328 ~~~~~~~~~----~~~~~~~~~~ 346 (351)
T cd03804 328 DFDPQAIRA----HAERFSESRF 346 (351)
T ss_pred ccCHHHHHH----HHHhcCHHHH
Confidence 22334443 3345666543
No 30
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=94.32 E-value=0.063 Score=55.97 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=64.6
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CH
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PE 630 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~ 630 (677)
..++.+.|+.|.+++.|...+....-++|||.+||- ||.++. -+..+.+.=....+.++..+...+.+.|..+ .+
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~--~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDV--GGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP 331 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecC--CCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH
Confidence 345778899999999998877778899999999985 565553 2444555434456677776666555555443 45
Q ss_pred HHHHHHHHHHHhh-hceeEecc
Q 005796 631 KKYFEMQFAVRKL-QRHFLWHA 651 (677)
Q Consensus 631 e~i~~Mq~~v~~v-~~hFlw~~ 651 (677)
+++.+|+++.++. .++|-|+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~ 353 (365)
T cd03825 332 DEREELGEAARELAENEFDSRV 353 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCHHH
Confidence 6678887766543 34555543
No 31
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=94.26 E-value=0.089 Score=56.13 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=66.5
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCCh------hhHHHHHh
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENI------PNLKDILL 626 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di------~~L~~iL~ 626 (677)
..+..+.|..|..+++|.-++....-++|||++|| |||.++.-- ..+++.=....+.++..+. ..+.+.|.
T Consensus 271 ~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 271 KEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGG--IPEVVVDGETGFLVPPDNSDADGFQAELAKAIN 347 (388)
T ss_pred HHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCC--HHHHhhCCCceEEcCCCCCcccchHHHHHHHHH
Confidence 45678899999999999766666677899999999 888887432 3344533444666666655 55555554
Q ss_pred cC--CHHHHHHHHHHHHh-hhceeEeccC
Q 005796 627 SI--PEKKYFEMQFAVRK-LQRHFLWHAK 652 (677)
Q Consensus 627 sI--s~e~i~~Mq~~v~~-v~~hFlw~~~ 652 (677)
.+ .+++..+|.++.++ +.++|-|+.-
T Consensus 348 ~l~~~~~~~~~~~~~a~~~~~~~~s~~~~ 376 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRKRAEEEFSWGSI 376 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 43 46777888776654 4566777643
No 32
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=94.15 E-value=0.28 Score=54.57 Aligned_cols=96 Identities=11% Similarity=0.124 Sum_probs=62.5
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCC---ccceEEEeccCChhhHHHHHh---
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLN---WEAFSVIIAEENIPNLKDILL--- 626 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLD---W~~fsV~v~e~di~~L~~iL~--- 626 (677)
..+..+.|+.|..++.|.=.+....-++|||++||.||. ++. --|.++++. =....+.+. +...+.+.+.
T Consensus 315 ~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll 390 (419)
T cd03806 315 FEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL 390 (419)
T ss_pred HHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEE-EcC-CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH
Confidence 357789999999999987666667889999999997765 442 135566653 223333332 4444333332
Q ss_pred cCCHHHHHHHHHHHHhhhceeEeccC
Q 005796 627 SIPEKKYFEMQFAVRKLQRHFLWHAK 652 (677)
Q Consensus 627 sIs~e~i~~Mq~~v~~v~~hFlw~~~ 652 (677)
..+++....|+++.+++..+|-|+..
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~fs~~~f 416 (419)
T cd03806 391 SLSEEERLRIRRAARSSVKRFSDEEF 416 (419)
T ss_pred hCCHHHHHHHHHHHHHHHHhhCHHHh
Confidence 33566666778777777788877653
No 33
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.83 E-value=0.29 Score=54.18 Aligned_cols=156 Identities=12% Similarity=0.171 Sum_probs=98.9
Q ss_pred ccCCCccCCccccCcccccccC-CccccCCCC-CCCCCcEEEEecccCC-CcchHHHHHHhhcCCCCceeecCCCC---C
Q 005796 476 VTAGFKLGRDVSLPETYVRSAR-NPLRDLGGK-PPSQRHILAFYAGNLH-GYLRPILLKYWKDKDPDMKIFGPMPP---G 549 (677)
Q Consensus 476 ~~~~frpgkDVsIP~~~~~s~~-~P~~~l~~~-p~s~R~iLafFaG~~~-g~vR~~L~~~w~~~~~d~~I~~~~p~---g 549 (677)
++.+||.+-|+-.|+.|..... +|.....+. -..+++.++.+.-++. ...|..+++.+..+ -.+.++|+|-. .
T Consensus 159 ~T~Tyr~dSd~~~pygy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~-l~iD~YG~c~~~~~~ 237 (372)
T KOG2619|consen 159 WTMTYRRDSDLFVPYGYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCIPRSARLDYYKELMKH-LEIDSYGECLRKNAN 237 (372)
T ss_pred ceEEEeccCCCCCccceEeecccCceecccccccccccceeeeeccccCcchHHHHHHHHHHhh-Cceeecccccccccc
Confidence 4567999999999987654433 443221111 1345667777776665 34566666665544 45667887742 1
Q ss_pred CCChhhHHHhhccceEEEeeCC---CCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEecc-CChhhHHHHH
Q 005796 550 VASKMNYIQHMKSSKYCICPKG---YEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAE-ENIPNLKDIL 625 (677)
Q Consensus 550 ~~~~~~Y~e~m~~SkFCL~P~G---~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e-~di~~L~~iL 625 (677)
......-.+.+.+-||-|.-.- ...-+.-|+-|+.+|.|||+++....-.| ++ ....|.|+. ..+.+|...|
T Consensus 238 ~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~f---vP-~~SfI~vdDF~s~~ela~yl 313 (372)
T KOG2619|consen 238 RDPSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENF---VP-PDSFIHVDDFQSPQELAAYL 313 (372)
T ss_pred CCCCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCcccccc---CC-CcceEehhhcCCHHHHHHHH
Confidence 1223345678889999997422 12236889999999999999998554333 34 555566644 3566899999
Q ss_pred hcCC--HHHHHHH
Q 005796 626 LSIP--EKKYFEM 636 (677)
Q Consensus 626 ~sIs--~e~i~~M 636 (677)
+.+. +..|.+-
T Consensus 314 k~L~~n~~~Y~~Y 326 (372)
T KOG2619|consen 314 KKLDKNPAAYLSY 326 (372)
T ss_pred HHhhcCHHHHHHH
Confidence 9994 4445444
No 34
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=93.71 E-value=0.29 Score=50.55 Aligned_cols=70 Identities=13% Similarity=0.119 Sum_probs=46.6
Q ss_pred hhHHHhhccceEEEeeCCC-CCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC
Q 005796 554 MNYIQHMKSSKYCICPKGY-EVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI 628 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~-~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI 628 (677)
.+..+.|+.+.+|++|.-. +.....++|||++|| |||.+|.--. .++++=..-.+.++. +..+.+.|..+
T Consensus 235 ~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~~~--~e~i~~~~~g~l~~~--~~~l~~~l~~l 305 (335)
T cd03802 235 AEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRGAV--PEVVEDGVTGFLVDS--VEELAAAVARA 305 (335)
T ss_pred HHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCCCc--hhheeCCCcEEEeCC--HHHHHHHHHHH
Confidence 3567889999999999653 445578999999998 9999986433 355533223333443 55566666544
No 35
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=93.69 E-value=0.11 Score=55.67 Aligned_cols=90 Identities=16% Similarity=0.240 Sum_probs=65.4
Q ss_pred hhhHHHhhccceEEEeeCCCC-----------CCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhH
Q 005796 553 KMNYIQHMKSSKYCICPKGYE-----------VNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNL 621 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~-----------~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L 621 (677)
..+..+.|+. .|+|++.+++ .....++++|++|+ |||+++.-.++ +++.=....+.++ ++.++
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-PVI~~~~~~~~--~~V~~~~~G~~v~--~~~el 290 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-PVIVWSKAAIA--DFIVENGLGFVVD--SLEEL 290 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-CEEECCCccHH--HHHHhCCceEEeC--CHHHH
Confidence 3456667766 8999887651 12345888999885 99998764333 4554456667776 56789
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhhceeE
Q 005796 622 KDILLSIPEKKYFEMQFAVRKLQRHFL 648 (677)
Q Consensus 622 ~~iL~sIs~e~i~~Mq~~v~~v~~hFl 648 (677)
.+.|..++++++.+|+++++++.+.+-
T Consensus 291 ~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 291 PEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988876543
No 36
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=93.55 E-value=0.2 Score=53.58 Aligned_cols=94 Identities=15% Similarity=0.072 Sum_probs=60.6
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
....+.|+.+.+|++|...+....-++|||++| +|||.++.-- ..+.+.-....+.++. +...+.+.+..+ .++
T Consensus 291 ~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~--~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~ 366 (392)
T cd03805 291 SQKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG--PLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD 366 (392)
T ss_pred HHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC--cHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH
Confidence 355688999999999877766667789999999 5777776422 2233432233444554 555554444433 355
Q ss_pred HHHHHHHHHHh-hhceeEecc
Q 005796 632 KYFEMQFAVRK-LQRHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~-v~~hFlw~~ 651 (677)
...+|+++.++ ++.+|-|+.
T Consensus 367 ~~~~~~~~a~~~~~~~~s~~~ 387 (392)
T cd03805 367 LADRMGAAGRKRVKEKFSTEA 387 (392)
T ss_pred HHHHHHHHHHHHHHHhcCHHH
Confidence 67888776655 456777764
No 37
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=93.54 E-value=0.2 Score=56.24 Aligned_cols=95 Identities=12% Similarity=0.167 Sum_probs=64.2
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccC-Ccc-----ceEEEeccCChhhHHHHHhc
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVL-NWE-----AFSVIIAEENIPNLKDILLS 627 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvL-DW~-----~fsV~v~e~di~~L~~iL~s 627 (677)
....+.++.+.++++|.-+++...-..|||++||.||+ ++.- ...+.+ |.. ...+.++..+...|.+.|..
T Consensus 357 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~g--g~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~ 433 (473)
T TIGR02095 357 ALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTG--GLADTVVDGDPEAESGTGFLFEEYDPGALLAALSR 433 (473)
T ss_pred HHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCC--CccceEecCCCCCCCCceEEeCCCCHHHHHHHHHH
Confidence 34568899999999998888888889999999997665 4432 223333 321 55677787777766665544
Q ss_pred C------CHHHHHHHHHHHHhhhceeEeccCC
Q 005796 628 I------PEKKYFEMQFAVRKLQRHFLWHAKP 653 (677)
Q Consensus 628 I------s~e~i~~Mq~~v~~v~~hFlw~~~p 653 (677)
+ .++.+.+|.++.. ++.|-|+.-.
T Consensus 434 ~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a 463 (473)
T TIGR02095 434 ALRLYRQDPSLWEALQKNAM--SQDFSWDKSA 463 (473)
T ss_pred HHHHHhcCHHHHHHHHHHHh--ccCCCcHHHH
Confidence 3 4566777776553 4567776543
No 38
>PRK14098 glycogen synthase; Provisional
Probab=93.51 E-value=0.25 Score=56.33 Aligned_cols=98 Identities=16% Similarity=0.253 Sum_probs=66.3
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccC-Cc---cceEEEeccCChhhHHHHHhcC-
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVL-NW---EAFSVIIAEENIPNLKDILLSI- 628 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvL-DW---~~fsV~v~e~di~~L~~iL~sI- 628 (677)
....+.++.+.++++|.=+++...-..|||++||+||+...+-. .|.+ |+ ..-.+.++..+...|.+.|..+
T Consensus 373 ~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl---~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l 449 (489)
T PRK14098 373 AFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGI---VETIEEVSEDKGSGFIFHDYTPEALVAKLGEAL 449 (489)
T ss_pred HHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCC---ceeeecCCCCCCceeEeCCCCHHHHHHHHHHHH
Confidence 34568899999999998888888889999999999998654321 1111 22 3445677887777666655432
Q ss_pred ----CHHHHHHHHHHHHhhhceeEeccCCCCc
Q 005796 629 ----PEKKYFEMQFAVRKLQRHFLWHAKPEKY 656 (677)
Q Consensus 629 ----s~e~i~~Mq~~v~~v~~hFlw~~~p~~~ 656 (677)
.++++.+|+++. +.+.|-|+.....|
T Consensus 450 ~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y 479 (489)
T PRK14098 450 ALYHDEERWEELVLEA--MERDFSWKNSAEEY 479 (489)
T ss_pred HHHcCHHHHHHHHHHH--hcCCCChHHHHHHH
Confidence 356667776544 34678777655444
No 39
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=93.47 E-value=0.17 Score=55.34 Aligned_cols=98 Identities=9% Similarity=0.057 Sum_probs=63.0
Q ss_pred hhHHHhhccceEEEeeCCC-CCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEE-EeccCChhhHHHHHhcC-CH
Q 005796 554 MNYIQHMKSSKYCICPKGY-EVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSV-IIAEENIPNLKDILLSI-PE 630 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~-~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV-~v~e~di~~L~~iL~sI-s~ 630 (677)
.+..+.|+.|..|++|..+ +....-++|||++| +|||.++.-- ..+++.=..... .++..+...|.+.|..+ .+
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg--~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGG--ITEFVLEGITGYHLAEPMTSDSIISDINRTLAD 344 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCC--cHhhcccCCceEEEeCCCCHHHHHHHHHHHHcC
Confidence 4667889999999999764 55557799999999 6888887532 334442222333 44556666655555333 34
Q ss_pred HHHHHHHHHHH-hhhceeEeccCCC
Q 005796 631 KKYFEMQFAVR-KLQRHFLWHAKPE 654 (677)
Q Consensus 631 e~i~~Mq~~v~-~v~~hFlw~~~p~ 654 (677)
.+..+|.++.+ .+..+|-|+.-..
T Consensus 345 ~~~~~~~~~ar~~~~~~fsw~~~a~ 369 (380)
T PRK15484 345 PELTQIAEQAKDFVFSKYSWEGVTQ 369 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 44567766665 4567888876543
No 40
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.20 E-value=0.41 Score=49.98 Aligned_cols=93 Identities=19% Similarity=0.283 Sum_probs=57.3
Q ss_pred hhHHHhhccceEEEeeCCC-CCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCC-hhhHHHHHhcCCHH
Q 005796 554 MNYIQHMKSSKYCICPKGY-EVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEEN-IPNLKDILLSIPEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~-~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~d-i~~L~~iL~sIs~e 631 (677)
.+..+.+..+..++.|.-. +....-++|||.+|| |||.++.- +..+++.- -...++..+ +.+....|.. .++
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~--~g~~~~~~~~l~~~i~~l~~-~~~ 332 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGD--KAIYFKVGDDLASLLEELEA-DPE 332 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecC--CeeEecCchHHHHHHHHHHh-CHH
Confidence 3567888888888888655 555677999999999 77777633 33455543 233344444 4443333333 236
Q ss_pred HHHHHHHHHHhh-hceeEeccC
Q 005796 632 KYFEMQFAVRKL-QRHFLWHAK 652 (677)
Q Consensus 632 ~i~~Mq~~v~~v-~~hFlw~~~ 652 (677)
.+.+|.++.++. ..+|-|+..
T Consensus 333 ~~~~~~~~~~~~~~~~fs~~~~ 354 (363)
T cd04955 333 EVSAMAKAARERIREKYTWEKI 354 (363)
T ss_pred HHHHHHHHHHHHHHHhCCHHHH
Confidence 677777766543 345766653
No 41
>PRK00654 glgA glycogen synthase; Provisional
Probab=92.91 E-value=0.38 Score=54.15 Aligned_cols=96 Identities=13% Similarity=0.230 Sum_probs=64.2
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccC-Ccc-----ceEEEeccCChhhHHHHHhcC
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVL-NWE-----AFSVIIAEENIPNLKDILLSI 628 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvL-DW~-----~fsV~v~e~di~~L~~iL~sI 628 (677)
.....++.+.+++.|.=+++...-+.|||++||+||+-..+ -..|.+ |.. .-.+.++..+...|.+.|..+
T Consensus 349 ~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~g---G~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~ 425 (466)
T PRK00654 349 LAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTG---GLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRA 425 (466)
T ss_pred HHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCC---CccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 34578899999999988888888999999999988874322 122322 331 456777888877766666543
Q ss_pred -----CHHHHHHHHHHHHhhhceeEeccCCCC
Q 005796 629 -----PEKKYFEMQFAVRKLQRHFLWHAKPEK 655 (677)
Q Consensus 629 -----s~e~i~~Mq~~v~~v~~hFlw~~~p~~ 655 (677)
.++.+.+|+++.. +.+|-|+.....
T Consensus 426 l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~ 455 (466)
T PRK00654 426 LELYRQPPLWRALQRQAM--AQDFSWDKSAEE 455 (466)
T ss_pred HHHhcCHHHHHHHHHHHh--ccCCChHHHHHH
Confidence 3455677766553 356777664433
No 42
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=92.71 E-value=0.74 Score=47.75 Aligned_cols=95 Identities=13% Similarity=0.092 Sum_probs=63.6
Q ss_pred hhHHHhhccceEEEeeCCC------CCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc
Q 005796 554 MNYIQHMKSSKYCICPKGY------EVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS 627 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~------~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s 627 (677)
.+..+.|+++.+|++|... +.....++|||.+||-.|. ++. ..+.+++.=..-...+++.+..++.+.|..
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~-~~~--~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~ 323 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVIS-TDV--SGIPELVEDGETGLLVPPGDPEALADAIER 323 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEe-cCC--CCcchhhhCCCceEEeCCCCHHHHHHHHHH
Confidence 4678999999999998665 4456889999999996654 443 223455533335666777676666555554
Q ss_pred C--CHHHHHHHHHHHHh-hhceeEecc
Q 005796 628 I--PEKKYFEMQFAVRK-LQRHFLWHA 651 (677)
Q Consensus 628 I--s~e~i~~Mq~~v~~-v~~hFlw~~ 651 (677)
+ .++++.+|.++.++ ++.+|-|+.
T Consensus 324 ~~~~~~~~~~~~~~a~~~~~~~~s~~~ 350 (355)
T cd03799 324 LLDDPELRREMGEAGRARVEEEFDIRK 350 (355)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 4 36667888777654 456676654
No 43
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=92.70 E-value=0.19 Score=53.53 Aligned_cols=94 Identities=13% Similarity=0.152 Sum_probs=65.8
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCC-ccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHH
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDN-FVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEK 631 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~-~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e 631 (677)
+..+.++.+..++.|.-.+....-+.|||.+|| |||..+- +.. .+.+.=....+.++..+...|.+.|..+ .++
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~--~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~ 347 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP--SEIIEDGENGYLVPKGDIEALAEAIIELLNDPK 347 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc--HHHcccCCCceEeCCCcHHHHHHHHHHHHcCHH
Confidence 566889999999998766556678999999999 7777662 222 2334334556677777777666655544 467
Q ss_pred HHHHHHHHHHhhhceeEecc
Q 005796 632 KYFEMQFAVRKLQRHFLWHA 651 (677)
Q Consensus 632 ~i~~Mq~~v~~v~~hFlw~~ 651 (677)
.+.+|+++.++...+|-|..
T Consensus 348 ~~~~~~~~a~~~~~~~s~~~ 367 (372)
T cd04949 348 LLQKFSEAAYENAERYSEEN 367 (372)
T ss_pred HHHHHHHHHHHHHHHhhHHH
Confidence 88899888877777776654
No 44
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=92.03 E-value=1.5 Score=45.04 Aligned_cols=91 Identities=9% Similarity=0.068 Sum_probs=58.0
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CH
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PE 630 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~ 630 (677)
..+..+.|+.+.++++|...+.....++|||.+||-. |.++.- .+.+.+.=....+.++..+. ++.+.+..+ .+
T Consensus 269 ~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~Pv-I~~~~~--~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~ 344 (374)
T cd03817 269 REELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPV-VAVDAP--GLPDLVADGENGFLFPPGDE-ALAEALLRLLQDP 344 (374)
T ss_pred hHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcE-EEeCCC--ChhhheecCceeEEeCCCCH-HHHHHHHHHHhCh
Confidence 3567889999999999987776778899999998755 555532 23344433345555655543 333333333 35
Q ss_pred HHHHHHHHHHHhhhcee
Q 005796 631 KKYFEMQFAVRKLQRHF 647 (677)
Q Consensus 631 e~i~~Mq~~v~~v~~hF 647 (677)
+...+|+++.++...++
T Consensus 345 ~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 345 ELRRRLSKNAEESAEKF 361 (374)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55678887776655443
No 45
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=91.93 E-value=0.94 Score=50.18 Aligned_cols=120 Identities=17% Similarity=0.212 Sum_probs=71.1
Q ss_pred cEEEEecccCCCcchHHHHHHhhcCC-CCceeec-CCCCCCCChhhHHHhhccceEEEeeC----CCCCCChhHHHHhhc
Q 005796 512 HILAFYAGNLHGYLRPILLKYWKDKD-PDMKIFG-PMPPGVASKMNYIQHMKSSKYCICPK----GYEVNSPRVVESIFY 585 (677)
Q Consensus 512 ~iLafFaG~~~g~vR~~L~~~w~~~~-~d~~I~~-~~p~g~~~~~~Y~e~m~~SkFCL~P~----G~~~~S~RL~EAl~~ 585 (677)
.+.+.+.|. |..+..+.+..+... .++.++. .+ ...++.+.|+.+..+++|. |.+ ...-++|||++
T Consensus 269 ~i~l~ivG~--G~~~~~l~~~~~~~~l~~~~~~~g~~-----~~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama~ 340 (415)
T cd03816 269 KLLCIITGK--GPLKEKYLERIKELKLKKVTIRTPWL-----SAEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFGC 340 (415)
T ss_pred CEEEEEEec--CccHHHHHHHHHHcCCCcEEEEcCcC-----CHHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHHc
Confidence 366666663 445655555444321 2344442 22 2457889999999988642 332 35679999999
Q ss_pred CcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC-----CHHHHHHHHHHHHhhh
Q 005796 586 ECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI-----PEKKYFEMQFAVRKLQ 644 (677)
Q Consensus 586 GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI-----s~e~i~~Mq~~v~~v~ 644 (677)
|+ |||.++.- ...+++.=....+.++ +...|.+.+..+ ++++..+|.++.++..
T Consensus 341 G~-PVI~s~~~--~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 341 GL-PVCALDFK--CIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred CC-CEEEeCCC--CHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 99 99998753 2335553233334442 555555544433 2678888888775543
No 46
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=91.58 E-value=0.25 Score=53.82 Aligned_cols=93 Identities=14% Similarity=0.264 Sum_probs=59.8
Q ss_pred hHHHhhccceEEEeeC--CCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CH
Q 005796 555 NYIQHMKSSKYCICPK--GYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PE 630 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~--G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~ 630 (677)
+....++.+..+++|. |.+. ...++|||++|| |||.++.- .+.+..=....+.++ .+..++.+.+..+ .+
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~-~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGI-QNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLANP 363 (397)
T ss_pred CHHHHHHhCCEEEecccccCCc-ccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHcCH
Confidence 4567889999999885 3332 357999999998 99988742 122211123345555 5666655555443 45
Q ss_pred HHHHHHHHHHHh-hhceeEeccCC
Q 005796 631 KKYFEMQFAVRK-LQRHFLWHAKP 653 (677)
Q Consensus 631 e~i~~Mq~~v~~-v~~hFlw~~~p 653 (677)
+...+|.++.++ +..+|-|+...
T Consensus 364 ~~~~~~~~~ar~~v~~~fsw~~~~ 387 (397)
T TIGR03087 364 AEREELGQAARRRVLQHYHWPRNL 387 (397)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHH
Confidence 667888777654 45678887543
No 47
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=91.41 E-value=0.35 Score=41.79 Aligned_cols=81 Identities=11% Similarity=0.188 Sum_probs=48.2
Q ss_pred EEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEec-cCChhhHHHHHhcCCHHHHHHHHHHH-Hhh
Q 005796 566 CICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIA-EENIPNLKDILLSIPEKKYFEMQFAV-RKL 643 (677)
Q Consensus 566 CL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~-e~di~~L~~iL~sIs~e~i~~Mq~~v-~~v 643 (677)
||-|.-.+-.+.|++|+|++||..|.-.. ..+.+.+++.+-.+.+. .+++.+....|.+ .++++.+|.++. +.+
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v 77 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARERV 77 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
Confidence 34443233356899999999997655433 23334566665666664 4455544444444 678888887766 445
Q ss_pred hceeEec
Q 005796 644 QRHFLWH 650 (677)
Q Consensus 644 ~~hFlw~ 650 (677)
+.++.|.
T Consensus 78 ~~~~t~~ 84 (92)
T PF13524_consen 78 LKRHTWE 84 (92)
T ss_pred HHhCCHH
Confidence 5566554
No 48
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=91.39 E-value=1.2 Score=46.16 Aligned_cols=94 Identities=11% Similarity=0.091 Sum_probs=62.7
Q ss_pred hhHHHhhccceEEEeeCC--CCCCChhHHHHhhcCcEeEEecCCccCCCCccC-CccceEEEeccCChhhHHHHHhcC--
Q 005796 554 MNYIQHMKSSKYCICPKG--YEVNSPRVVESIFYECVPVIISDNFVPPFYEVL-NWEAFSVIIAEENIPNLKDILLSI-- 628 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G--~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvL-DW~~fsV~v~e~di~~L~~iL~sI-- 628 (677)
.++.+.++.+..|++|.- .+....-++|||.+|| |||.++.-..+ +.+ +.......++..+...+.+.+..+
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~-Pvi~~~~~~~~--~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~ 331 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGK-PVISTEIGTGG--SYVNLHGVTGLVVPPGDPAALAEAIRRLLE 331 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCC-CEEecCCCCch--hHHhhCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 467789999999999852 2333467999999975 66666632221 222 235667777777877766666554
Q ss_pred CHHHHHHHHHHHHhh-hceeEec
Q 005796 629 PEKKYFEMQFAVRKL-QRHFLWH 650 (677)
Q Consensus 629 s~e~i~~Mq~~v~~v-~~hFlw~ 650 (677)
.++++.+|+++.++. +++|-|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 332 DPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred CHHHHHHHHHHHHHHHHHhcchH
Confidence 577788888877554 5666664
No 49
>PRK14099 glycogen synthase; Provisional
Probab=91.20 E-value=0.9 Score=51.84 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=65.9
Q ss_pred hHHHhh-ccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCc-cCCcc--------ceEEEeccCChhhHHHH
Q 005796 555 NYIQHM-KSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYE-VLNWE--------AFSVIIAEENIPNLKDI 624 (677)
Q Consensus 555 ~Y~e~m-~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~d-vLDW~--------~fsV~v~e~di~~L~~i 624 (677)
+....+ +.+.+.+.|.=+++...-..|||++||+||+ ++.=-+ .| +.|.. .-.+.++..+...|.+.
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl--~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~a 437 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGL--ADTVVDANEMAIATGVATGVQFSPVTADALAAA 437 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCc--cceeecccccccccCCCceEEeCCCCHHHHHHH
Confidence 445555 5689989998888888999999999999988 432111 12 23442 35677888888777766
Q ss_pred Hhc----C-CHHHHHHHHHHHHhhhceeEeccCCCCc
Q 005796 625 LLS----I-PEKKYFEMQFAVRKLQRHFLWHAKPEKY 656 (677)
Q Consensus 625 L~s----I-s~e~i~~Mq~~v~~v~~hFlw~~~p~~~ 656 (677)
|.. + .++...+|+++.. .+.|-|+.....+
T Consensus 438 i~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y 472 (485)
T PRK14099 438 LRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHY 472 (485)
T ss_pred HHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHH
Confidence 653 2 4667788887663 4678887654443
No 50
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=91.18 E-value=0.6 Score=50.88 Aligned_cols=99 Identities=9% Similarity=0.036 Sum_probs=59.8
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC---C
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI---P 629 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI---s 629 (677)
..+..+.++.+..++.|.-.+....-++|||++|| |||.++.-- ..+++.=. ..+.++. +...+.+.|..+ .
T Consensus 260 ~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg--~~e~i~~~-~~~~~~~-~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 260 HERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGG--IPEVLPPD-MILLAEP-DVESIVRKLEEAISIL 334 (398)
T ss_pred HHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCC--chhheeCC-ceeecCC-CHHHHHHHHHHHHhCh
Confidence 35788899999999988755555578999999998 556666432 33455322 2333433 554444444322 2
Q ss_pred HHHHHHHHHHHHhhhceeEeccCCCCc
Q 005796 630 EKKYFEMQFAVRKLQRHFLWHAKPEKY 656 (677)
Q Consensus 630 ~e~i~~Mq~~v~~v~~hFlw~~~p~~~ 656 (677)
.++...+++...+++.+|-|+.....+
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~~~~~~~ 361 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWEDVAKRT 361 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHHHHHHHH
Confidence 223233444556678888888755444
No 51
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=91.01 E-value=0.22 Score=55.44 Aligned_cols=95 Identities=11% Similarity=0.139 Sum_probs=63.4
Q ss_pred hHHHhhccc----eEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--
Q 005796 555 NYIQHMKSS----KYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI-- 628 (677)
Q Consensus 555 ~Y~e~m~~S----kFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI-- 628 (677)
+..+.++.+ ..++.|.-++....-++|||++|| |||.++.- ...+++.=..-.+.++..|...|.+.+..+
T Consensus 329 ~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~g--g~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~ 405 (439)
T TIGR02472 329 DVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDG--GPRDIIANCRNGLLVDVLDLEAIASALEDALS 405 (439)
T ss_pred HHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCC--CcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHh
Confidence 444555544 455556555555677999999999 99999853 344666445567778888887766666544
Q ss_pred CHHHHHHHHHHHH-hhhceeEeccC
Q 005796 629 PEKKYFEMQFAVR-KLQRHFLWHAK 652 (677)
Q Consensus 629 s~e~i~~Mq~~v~-~v~~hFlw~~~ 652 (677)
.++...+|.++.+ ++..+|-|+..
T Consensus 406 ~~~~~~~~~~~a~~~~~~~fsw~~~ 430 (439)
T TIGR02472 406 DSSQWQLWSRNGIEGVRRHYSWDAH 430 (439)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 4566677766654 45678888764
No 52
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=90.69 E-value=0.96 Score=50.38 Aligned_cols=94 Identities=12% Similarity=0.224 Sum_probs=62.2
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCcc-CCcc-----ceEEEeccCChhhHHHHHhc
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEV-LNWE-----AFSVIIAEENIPNLKDILLS 627 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dv-LDW~-----~fsV~v~e~di~~L~~iL~s 627 (677)
....+.++.+.+++.|.-+++...-.+|||++||.||+-... ...+. .|.. .-.+.++..+...|.+.+..
T Consensus 362 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g---g~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~ 438 (476)
T cd03791 362 ALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG---GLADTVIDYNEDTGEGTGFVFEGYNADALLAALRR 438 (476)
T ss_pred HHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC---CccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHH
Confidence 345678899999999988888888899999999998764322 22232 2332 14667777777666655544
Q ss_pred C-----CHHHHHHHHHHHHhhhceeEeccC
Q 005796 628 I-----PEKKYFEMQFAVRKLQRHFLWHAK 652 (677)
Q Consensus 628 I-----s~e~i~~Mq~~v~~v~~hFlw~~~ 652 (677)
+ .++...+|+++.. +.+|-|+..
T Consensus 439 ~l~~~~~~~~~~~~~~~~~--~~~fsw~~~ 466 (476)
T cd03791 439 ALALYRDPEAWRKLQRNAM--AQDFSWDRS 466 (476)
T ss_pred HHHHHcCHHHHHHHHHHHh--ccCCChHHH
Confidence 3 2567777776653 345666643
No 53
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=89.83 E-value=1.1 Score=48.28 Aligned_cols=72 Identities=17% Similarity=0.172 Sum_probs=50.7
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI 628 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI 628 (677)
.+.+.++.+..+++|..++....-++|||++| +|||.++..-- ..+++.=....+.++..++.++.+.+..+
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g-~~eiv~~~~~G~lv~~~d~~~la~~i~~l 321 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSG-PRDIIKPGLNGELYTPGNIDEFVGKLNKV 321 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCC-hHHHccCCCceEEECCCCHHHHHHHHHHH
Confidence 45677888899999987766678999999999 57787872221 22444334455666788888777666655
No 54
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=89.78 E-value=0.76 Score=49.40 Aligned_cols=94 Identities=14% Similarity=0.071 Sum_probs=62.1
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCC-h-hhHHHHHhcCCHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEEN-I-PNLKDILLSIPEK 631 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~d-i-~~L~~iL~sIs~e 631 (677)
.+..+.++.+..++.|..++....-++|||++| +|||.++.--++ +.+.-....+.++..+ + ..|...|. .++
T Consensus 265 ~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a~~i~~ll~--~~~ 339 (372)
T cd03792 265 LEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAAVRILYLLR--DPE 339 (372)
T ss_pred HHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHHHHHHHHHc--CHH
Confidence 466788999999999987776678899999999 599998854333 4443333334443222 1 23444443 467
Q ss_pred HHHHHHHHHHh-hhceeEeccC
Q 005796 632 KYFEMQFAVRK-LQRHFLWHAK 652 (677)
Q Consensus 632 ~i~~Mq~~v~~-v~~hFlw~~~ 652 (677)
...+|.++.++ +..+|-|+.-
T Consensus 340 ~~~~~~~~a~~~~~~~~s~~~~ 361 (372)
T cd03792 340 LRRKMGANAREHVRENFLITRH 361 (372)
T ss_pred HHHHHHHHHHHHHHHHcCHHHH
Confidence 77888887766 4567877654
No 55
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=89.31 E-value=0.58 Score=52.78 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=65.1
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCc------cceEEEeccCChhhHHHHHhc
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNW------EAFSVIIAEENIPNLKDILLS 627 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW------~~fsV~v~e~di~~L~~iL~s 627 (677)
.+..+.|..+..++.|.-.+....-++|||++|| |||.+|.- ...+++.= ....+.++..+...+.+.+..
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g--~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ 438 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVG--SCRELIEGADDEALGPAGEVVPPADPEALARAILR 438 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCC--ChHHHhcCCcccccCCceEEECCCCHHHHHHHHHH
Confidence 4567888999999988654445578999999999 88887642 22343322 246778888888776666655
Q ss_pred C--CHHHHHHHHHHHHh-hhceeEecc
Q 005796 628 I--PEKKYFEMQFAVRK-LQRHFLWHA 651 (677)
Q Consensus 628 I--s~e~i~~Mq~~v~~-v~~hFlw~~ 651 (677)
+ .++...+|.++.++ +++.|.|+.
T Consensus 439 ll~~~~~~~~~~~~a~~~v~~~~s~~~ 465 (475)
T cd03813 439 LLKDPELRRAMGEAGRKRVERYYTLER 465 (475)
T ss_pred HhcCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 4 46777888776653 555566554
No 56
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=89.10 E-value=3 Score=46.09 Aligned_cols=93 Identities=15% Similarity=0.153 Sum_probs=56.4
Q ss_pred hHHHhhccc--eEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEecc-CChhhHHHHHhcC--C
Q 005796 555 NYIQHMKSS--KYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAE-ENIPNLKDILLSI--P 629 (677)
Q Consensus 555 ~Y~e~m~~S--kFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e-~di~~L~~iL~sI--s 629 (677)
+..+.++.+ ..++.|...+....-++|||++|| |||.++.-- ..++++=..-.+.++. .+..++.+.|..+ .
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg--~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~ 377 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGG--TPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN 377 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCC--cHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC
Confidence 445666553 333345444445577999999996 999888432 3355543434555554 3566555555544 5
Q ss_pred HHHHHHHHHHHHhh-hceeEec
Q 005796 630 EKKYFEMQFAVRKL-QRHFLWH 650 (677)
Q Consensus 630 ~e~i~~Mq~~v~~v-~~hFlw~ 650 (677)
+++..+|+++.++. ..+|-|+
T Consensus 378 ~~~~~~m~~~ar~~~~~~f~~~ 399 (407)
T cd04946 378 EEEYQTMREKAREKWEENFNAS 399 (407)
T ss_pred HHHHHHHHHHHHHHHHHHcCHH
Confidence 78888998877554 3455544
No 57
>PHA01633 putative glycosyl transferase group 1
Probab=89.05 E-value=0.42 Score=52.28 Aligned_cols=49 Identities=24% Similarity=0.230 Sum_probs=38.6
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCC
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLN 605 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLD 605 (677)
.+..+.++.+.+.++|.-.+....-+.|||++|| |||.++-- |..|+..
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~~--~l~Ei~g 263 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLMP--PLDEFTS 263 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccCC--CceeecC
Confidence 4567899999999999877777788999999999 99988752 4444433
No 58
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=88.79 E-value=1.3 Score=44.64 Aligned_cols=81 Identities=14% Similarity=0.075 Sum_probs=53.7
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhH----HHHHhcCC-
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNL----KDILLSIP- 629 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L----~~iL~sIs- 629 (677)
+..+.++.+.+|++|.-.+.....++|||.+||. ||.+|.- ...+++.=....+.++..+...+ ..++....
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 4568899999999997666667789999999996 4555543 33455544556667777777665 33333333
Q ss_pred HHHHHHHHH
Q 005796 630 EKKYFEMQF 638 (677)
Q Consensus 630 ~e~i~~Mq~ 638 (677)
++...+|..
T Consensus 333 ~~~~~~~~~ 341 (353)
T cd03811 333 PELRERLAA 341 (353)
T ss_pred hHHHHHHHH
Confidence 444555665
No 59
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=87.81 E-value=0.57 Score=54.79 Aligned_cols=109 Identities=16% Similarity=0.287 Sum_probs=72.1
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCC-C-CccC-CccceEEEecc-------CChhhHHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPP-F-YEVL-NWEAFSVIIAE-------ENIPNLKD 623 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LP-F-~dvL-DW~~fsV~v~e-------~di~~L~~ 623 (677)
.+|.+.++.+..++.|.-++++..-..|||++| +|||.++.--++ | .+++ +-....|.|.. ..+.+|.+
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 479999999999999998998889999999999 599999864331 0 1333 33346666652 23344544
Q ss_pred HHhc---CCHHHHHHHHHHHHhhhceeEeccCCCCc-cHHHHHH
Q 005796 624 ILLS---IPEKKYFEMQFAVRKLQRHFLWHAKPEKY-DLFHMTL 663 (677)
Q Consensus 624 iL~s---Is~e~i~~Mq~~v~~v~~hFlw~~~p~~~-Daf~mtl 663 (677)
.|.. .+..+....|.+..++...|.|+.-...| +|.+++|
T Consensus 545 ~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al 588 (590)
T cd03793 545 YMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLAL 588 (590)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 4444 34444444444445788899998765444 3555544
No 60
>PLN02949 transferase, transferring glycosyl groups
Probab=86.69 E-value=1.1 Score=50.94 Aligned_cols=95 Identities=16% Similarity=0.181 Sum_probs=59.2
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccC-Ccc--ceEEEeccCChhhHHHHHhcC--
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVL-NWE--AFSVIIAEENIPNLKDILLSI-- 628 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvL-DW~--~fsV~v~e~di~~L~~iL~sI-- 628 (677)
.+..+.|+++.+++.|.-++....-++|||++||+||..... =|-.+++ ++. .-.+.+ .++..+.+.+..+
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~--~~~~~la~ai~~ll~ 421 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLA--TTVEEYADAILEVLR 421 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccC--CCHHHHHHHHHHHHh
Confidence 456788999999988876666667899999999988776432 1333332 221 111112 2555554444433
Q ss_pred -CHHHHHHHHHHHHhhhceeEeccC
Q 005796 629 -PEKKYFEMQFAVRKLQRHFLWHAK 652 (677)
Q Consensus 629 -s~e~i~~Mq~~v~~v~~hFlw~~~ 652 (677)
++++..+|+++.++...+|-|+..
T Consensus 422 ~~~~~r~~m~~~ar~~~~~FS~e~~ 446 (463)
T PLN02949 422 MRETERLEIAAAARKRANRFSEQRF 446 (463)
T ss_pred CCHHHHHHHHHHHHHHHHHcCHHHH
Confidence 567778888877665566766553
No 61
>PHA01630 putative group 1 glycosyl transferase
Probab=86.10 E-value=1.4 Score=47.89 Aligned_cols=41 Identities=10% Similarity=0.111 Sum_probs=32.6
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecC
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISD 594 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD 594 (677)
..+..+.++.+..|+.|.-++....-++|||++|| |||.+|
T Consensus 200 ~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~ 240 (331)
T PHA01630 200 DDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTE 240 (331)
T ss_pred HHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeC
Confidence 35667889999999998766655677999999998 556665
No 62
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=85.09 E-value=3.7 Score=48.12 Aligned_cols=64 Identities=17% Similarity=0.096 Sum_probs=46.1
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhH
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNL 621 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L 621 (677)
+..+.|+.+..++.|.=++....-++|||++|| |||.++.--. .+.+.=..-.+.++..|...+
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~--~EiV~dG~nG~LVp~~D~~aL 528 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGS--AECFIEGVSGFILDDAQTVNL 528 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCc--HHHcccCCcEEEECCCChhhH
Confidence 556788999998888767777789999999999 9998885322 244443455666777665433
No 63
>PLN02939 transferase, transferring glycosyl groups
Probab=84.15 E-value=1.9 Score=53.25 Aligned_cols=98 Identities=13% Similarity=0.196 Sum_probs=66.2
Q ss_pred HHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCcc--------ceEEEeccCChhhHHHHHhc-
Q 005796 557 IQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWE--------AFSVIIAEENIPNLKDILLS- 627 (677)
Q Consensus 557 ~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~--------~fsV~v~e~di~~L~~iL~s- 627 (677)
...++.+.++++|.=+++...-..|||++||+||+...+= + -+-+.|++ .-.+.++..+...|.+.|..
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L-~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-L-NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-C-cceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 3679999999999888888899999999999999754321 1 11123432 23556677777665554432
Q ss_pred ---C--CHHHHHHHHHHHHhhhceeEeccCCCCccH
Q 005796 628 ---I--PEKKYFEMQFAVRKLQRHFLWHAKPEKYDL 658 (677)
Q Consensus 628 ---I--s~e~i~~Mq~~v~~v~~hFlw~~~p~~~Da 658 (677)
+ .++.+.+|+++. +...|-|+.....|..
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~qYee 962 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWDSSASQYEE 962 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHHHHHHHHHH
Confidence 2 477788887754 4567888876655543
No 64
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=83.71 E-value=4.3 Score=45.01 Aligned_cols=153 Identities=14% Similarity=0.140 Sum_probs=82.1
Q ss_pred CCCccCCccc-cCcccccccCCccccCCCCCCCCCcEEEEecccCCCcchHHHHH---HhhcC---CCCceeecCCCCCC
Q 005796 478 AGFKLGRDVS-LPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGYLRPILLK---YWKDK---DPDMKIFGPMPPGV 550 (677)
Q Consensus 478 ~~frpgkDVs-IP~~~~~s~~~P~~~l~~~p~s~R~iLafFaG~~~g~vR~~L~~---~w~~~---~~d~~I~~~~p~g~ 550 (677)
..|||.|+-- |-....+-...|+...+ -++=+.++|++++.-....++ .|..+ ..++...-..|
T Consensus 276 ~Q~RPEKnH~~Lql~Al~~~~~pl~a~~------~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~P--- 346 (465)
T KOG1387|consen 276 AQFRPEKNHKILQLFALYLKNEPLEASV------SPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVP--- 346 (465)
T ss_pred eecCcccccHHHHHHHHHHhcCchhhcc------CCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCC---
Confidence 4589988876 22221222344543221 123456788887654333333 33321 12333332211
Q ss_pred CChhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCc-cCCccceEE-EeccCChh---hHHHHH
Q 005796 551 ASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYE-VLNWEAFSV-IIAEENIP---NLKDIL 625 (677)
Q Consensus 551 ~~~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~d-vLDW~~fsV-~v~e~di~---~L~~iL 625 (677)
-.+..++|.++.+.+.-.=.+-....++|+|++|.|||.=.-. =|--| |.+|.-=.. ++.+.+.. .+.+|+
T Consensus 347 --y~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~Sg--GP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv 422 (465)
T KOG1387|consen 347 --YEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSG--GPLLDIVTPWDGETTGFLAPTDEEYAEAILKIV 422 (465)
T ss_pred --HHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCC--CCceeeeeccCCccceeecCChHHHHHHHHHHH
Confidence 2356688999999988766665668899999999999875432 12223 456643222 22333333 344444
Q ss_pred hcCCHHHHHHHHHHHHhhh
Q 005796 626 LSIPEKKYFEMQFAVRKLQ 644 (677)
Q Consensus 626 ~sIs~e~i~~Mq~~v~~v~ 644 (677)
.. ..++...||++.+.--
T Consensus 423 ~~-~~~~r~~~r~~AR~s~ 440 (465)
T KOG1387|consen 423 KL-NYDERNMMRRNARKSL 440 (465)
T ss_pred Hc-CHHHHHHHHHHHHHHH
Confidence 33 4555777777664443
No 65
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=83.39 E-value=1.9 Score=53.75 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=67.2
Q ss_pred hHHHhhccc----eEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--
Q 005796 555 NYIQHMKSS----KYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI-- 628 (677)
Q Consensus 555 ~Y~e~m~~S----kFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI-- 628 (677)
+..+.++.+ ..+++|.=+++...-+.|||++|| |||.++.- ...+++.-..-.+.|+..+...|.+.|..+
T Consensus 560 dvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-PVVASdvG--G~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~ 636 (1050)
T TIGR02468 560 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PMVATKNG--GPVDIHRVLDNGLLVDPHDQQAIADALLKLVA 636 (1050)
T ss_pred HHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC-CEEEeCCC--CcHHHhccCCcEEEECCCCHHHHHHHHHHHhh
Confidence 334555544 355567666666788999999996 99988843 344566555667888888888777666554
Q ss_pred CHHHHHHHHHHHHhhhceeEeccCCC
Q 005796 629 PEKKYFEMQFAVRKLQRHFLWHAKPE 654 (677)
Q Consensus 629 s~e~i~~Mq~~v~~v~~hFlw~~~p~ 654 (677)
.++...+|.++.++..++|-|.....
T Consensus 637 Dpelr~~m~~~gr~~v~~FSWe~ia~ 662 (1050)
T TIGR02468 637 DKQLWAECRQNGLKNIHLFSWPEHCK 662 (1050)
T ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 46667889887766556788877543
No 66
>PLN00142 sucrose synthase
Probab=80.58 E-value=3.1 Score=50.67 Aligned_cols=97 Identities=13% Similarity=0.122 Sum_probs=63.6
Q ss_pred HHhhcc-ceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc------CC
Q 005796 557 IQHMKS-SKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS------IP 629 (677)
Q Consensus 557 ~e~m~~-SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s------Is 629 (677)
...++. +..+++|.=++....-++|||++|| |||.++.--+ .+++.=..-.+.|+..+...+.+.|.. -.
T Consensus 660 yr~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~--~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~D 736 (815)
T PLN00142 660 YRYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGP--AEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKED 736 (815)
T ss_pred HHHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC
Confidence 344443 3455677667777788999999997 7777764322 244544566777888777765555432 15
Q ss_pred HHHHHHHHHHH-HhhhceeEeccCCCCc
Q 005796 630 EKKYFEMQFAV-RKLQRHFLWHAKPEKY 656 (677)
Q Consensus 630 ~e~i~~Mq~~v-~~v~~hFlw~~~p~~~ 656 (677)
++...+|.++. +++..+|-|+.....+
T Consensus 737 p~lr~~mg~~Ar~rv~e~FSWe~~A~rl 764 (815)
T PLN00142 737 PSYWNKISDAGLQRIYECYTWKIYAERL 764 (815)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 67778887765 5567889998765443
No 67
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=76.97 E-value=2.7 Score=38.04 Aligned_cols=69 Identities=12% Similarity=0.172 Sum_probs=40.8
Q ss_pred hhHHHhhccceEEEeeCCC-CCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc
Q 005796 554 MNYIQHMKSSKYCICPKGY-EVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS 627 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~-~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s 627 (677)
.++.+.|+++.++++|.-. ...+..++|++.+||-+|. ++. ++.+.+.-....+.+ ..+..++.+.|..
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~-~~~---~~~~~~~~~~~~~~~-~~~~~~l~~~i~~ 131 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIA-SDN---GAEGIVEEDGCGVLV-ANDPEELAEAIER 131 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEE-EHH---HCHCHS---SEEEE--TT-HHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEE-CCc---chhhheeecCCeEEE-CCCHHHHHHHHHH
Confidence 3789999999999998642 2356899999999985555 444 455544335566666 6666666655543
No 68
>PLN02316 synthase/transferase
Probab=76.21 E-value=4 Score=51.00 Aligned_cols=96 Identities=9% Similarity=0.158 Sum_probs=61.5
Q ss_pred HhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCcc------------ceEEEeccCChhhHHHH-
Q 005796 558 QHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWE------------AFSVIIAEENIPNLKDI- 624 (677)
Q Consensus 558 e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~------------~fsV~v~e~di~~L~~i- 624 (677)
..++.+.++++|.=+++...-..|||++||+||+-..+= +| +-+.|++ .-.+.++..+...|...
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGG-L~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL 992 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGG-LF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYAL 992 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCC-cH-hhccccccccccccccccCCceEEeCCCCHHHHHHHH
Confidence 689999999999888998999999999999999964421 11 1123442 34667777776654443
Q ss_pred ---HhcCC--HHHHHHHHHHHHhhhceeEeccCCCCcc
Q 005796 625 ---LLSIP--EKKYFEMQFAVRKLQRHFLWHAKPEKYD 657 (677)
Q Consensus 625 ---L~sIs--~e~i~~Mq~~v~~v~~hFlw~~~p~~~D 657 (677)
|.... .+.+.+++++. +.+.|-|+.....|.
T Consensus 993 ~raL~~~~~~~~~~~~~~r~~--m~~dFSW~~~A~~Y~ 1028 (1036)
T PLN02316 993 NRAISAWYDGRDWFNSLCKRV--MEQDWSWNRPALDYM 1028 (1036)
T ss_pred HHHHhhhhhhHHHHHHHHHHH--HHhhCCHHHHHHHHH
Confidence 33321 22233344332 456799987655553
No 69
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=75.86 E-value=2.8 Score=45.52 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=41.6
Q ss_pred hhHHHhhccceEEEeeCCCC-----CCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc
Q 005796 554 MNYIQHMKSSKYCICPKGYE-----VNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS 627 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~-----~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s 627 (677)
.+..+.|+.+..|++|--.. .....++|+|++|| |||.++ +.++.....-.+.+ ..+..++.+.+..
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~-----~~~~~~~~~~~~~~-~~d~~~~~~ai~~ 336 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP-----LPEVRRYEDEVVLI-ADDPEEFVAAIEK 336 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC-----cHHHHhhcCcEEEe-CCCHHHHHHHHHH
Confidence 46788999999999985321 22357999999997 777554 23444333323333 3455555555444
No 70
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=74.82 E-value=5.8 Score=41.83 Aligned_cols=82 Identities=18% Similarity=0.150 Sum_probs=50.8
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCC-----ccCCccceEEEeccCC--hhhHHHHHhc
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFY-----EVLNWEAFSVIIAEEN--IPNLKDILLS 627 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~-----dvLDW~~fsV~v~e~d--i~~L~~iL~s 627 (677)
++.+.|..+..|+.+.| ..-++|||.+|| |||+.+.-.-+-+ +.+......+.++..+ ...|.+.|+.
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 68899999999998766 246899999997 6666531100000 1233355566676554 5555444443
Q ss_pred C--CHHHHHHHHHHHH
Q 005796 628 I--PEKKYFEMQFAVR 641 (677)
Q Consensus 628 I--s~e~i~~Mq~~v~ 641 (677)
+ .++...+|.++.+
T Consensus 318 ll~~~~~~~~~~~~~~ 333 (348)
T TIGR01133 318 LLLDPANLEAMAEAAR 333 (348)
T ss_pred HHcCHHHHHHHHHHHH
Confidence 3 4666777877664
No 71
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=72.26 E-value=23 Score=36.84 Aligned_cols=71 Identities=13% Similarity=0.064 Sum_probs=46.2
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI 628 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI 628 (677)
.+..+.++.+.++++|.-.+....-++|||++||-.| .++.- +..+++.= .........+..++.+.+..+
T Consensus 258 ~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI-~s~~~--~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l 328 (358)
T cd03812 258 NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCI-LSDTI--TKEVDLTD-LVKFLSLDESPEIWAEEILKL 328 (358)
T ss_pred CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEE-EEcCC--chhhhhcc-CccEEeCCCCHHHHHHHHHHH
Confidence 3567889999999999877777889999999999554 45532 22233322 334444444555555555544
No 72
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=71.00 E-value=6.3 Score=47.97 Aligned_cols=90 Identities=11% Similarity=0.141 Sum_probs=61.8
Q ss_pred eEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC------CHHHHHHHH
Q 005796 564 KYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI------PEKKYFEMQ 637 (677)
Q Consensus 564 kFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI------s~e~i~~Mq 637 (677)
..+++|.=+++...-++|||++||-+|. ++.=-+ .+++.=..-.+.|+..+...+.+.|..+ .++...+|.
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGlPVVA-T~~GG~--~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms 721 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGLPTFA-TRFGGP--LEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS 721 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCCCEEE-cCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 4667787788888999999999985544 543212 2444445667778888877766665532 577778887
Q ss_pred HHH-HhhhceeEeccCCCCc
Q 005796 638 FAV-RKLQRHFLWHAKPEKY 656 (677)
Q Consensus 638 ~~v-~~v~~hFlw~~~p~~~ 656 (677)
++. ++++.+|-|......+
T Consensus 722 ~~a~~rV~~~FSW~~~A~~l 741 (784)
T TIGR02470 722 QGGLQRIYEKYTWKIYSERL 741 (784)
T ss_pred HHHHHHHHHhCCHHHHHHHH
Confidence 765 5567899999865433
No 73
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=70.60 E-value=20 Score=34.09 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=37.3
Q ss_pred CCceeecCCCCCCCChhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecC
Q 005796 538 PDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISD 594 (677)
Q Consensus 538 ~d~~I~~~~p~g~~~~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD 594 (677)
..+.+.+..+ ....+...++.|..+++|...+..+..++|||.+||..| .++
T Consensus 161 ~~v~~~~~~~----~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi-~s~ 212 (229)
T cd01635 161 DRVIFLGGLD----PEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVI-ATD 212 (229)
T ss_pred ccEEEeCCCC----cHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEE-EcC
Confidence 3455555431 134566677779999999988888899999999987554 454
No 74
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=69.78 E-value=17 Score=39.71 Aligned_cols=78 Identities=18% Similarity=0.224 Sum_probs=48.5
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCcc------CCccceEEEeccCChhhHHHHHhcC
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEV------LNWEAFSVIIAEENIPNLKDILLSI 628 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dv------LDW~~fsV~v~e~di~~L~~iL~sI 628 (677)
+..+.|+.|..++.+.|- .-+.|||.+|| |||+.+. .|-+++ ++ ..+.+.+ .+...|.+.+..+
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~--~pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~l 344 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGY--IPGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAEW 344 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecC--CCccchhhHHHHHh-CCceeec--CCHHHHHHHHHHH
Confidence 567899999998887762 24899999997 6666652 233332 22 3444443 4444444444433
Q ss_pred ---CHHHHHHHHHHHHh
Q 005796 629 ---PEKKYFEMQFAVRK 642 (677)
Q Consensus 629 ---s~e~i~~Mq~~v~~ 642 (677)
.++...+|+++.++
T Consensus 345 l~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 345 FGDKSDELEAMSENALK 361 (382)
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 26777888776643
No 75
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=68.47 E-value=33 Score=36.30 Aligned_cols=131 Identities=18% Similarity=0.137 Sum_probs=80.6
Q ss_pred CCCcEEEEecccCCCc-chHHHHHHhhcCC--CCceeecCC-CCCC--------CChhhHHHhhccceEEEeeCCCCCCC
Q 005796 509 SQRHILAFYAGNLHGY-LRPILLKYWKDKD--PDMKIFGPM-PPGV--------ASKMNYIQHMKSSKYCICPKGYEVNS 576 (677)
Q Consensus 509 s~R~iLafFaG~~~g~-vR~~L~~~w~~~~--~d~~I~~~~-p~g~--------~~~~~Y~e~m~~SkFCL~P~G~~~~S 576 (677)
+.|.-.+||+|+..+. .|..|++...+.. .+..+...+ +..| ..... .+...+-||=+...|.+ .|
T Consensus 81 ~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~yKyli~~dG~~-~S 158 (256)
T smart00672 81 SDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSP-LEEQCKHKYKINIEGVA-WS 158 (256)
T ss_pred cccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCC-HHHHhhcceEEecCCcc-ch
Confidence 5677789999998877 8998887655431 223443222 1111 11123 34445789999999986 67
Q ss_pred hhHHHHhhcCcEeEEecCCccCCCCc-cCCccceEEEe-ccCC--hhhHHHHHhcCCHHHHHHHHHHHHh
Q 005796 577 PRVVESIFYECVPVIISDNFVPPFYE-VLNWEAFSVII-AEEN--IPNLKDILLSIPEKKYFEMQFAVRK 642 (677)
Q Consensus 577 ~RL~EAl~~GCIPVIisD~~~LPF~d-vLDW~~fsV~v-~e~d--i~~L~~iL~sIs~e~i~~Mq~~v~~ 642 (677)
.||.--|.+++|++.....|.-=|.+ ..+|.-|.-.- +-.+ +.+..+.+++- +++.+++=++..+
T Consensus 159 ~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~~~~-~~~a~~Ia~~~~~ 227 (256)
T smart00672 159 VRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEH-DKKAQEIGKRGSE 227 (256)
T ss_pred hhHHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 89999999999999988655433444 33666654222 1123 66666666653 4455555444444
No 76
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=67.49 E-value=32 Score=38.64 Aligned_cols=131 Identities=14% Similarity=0.162 Sum_probs=74.7
Q ss_pred CCCcEEEEecccCCCc-chHHHHHHhhcCC--CCceeecCCC----CCCCChhhHHHhhccceEEEeeCCCCCCChhHHH
Q 005796 509 SQRHILAFYAGNLHGY-LRPILLKYWKDKD--PDMKIFGPMP----PGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVE 581 (677)
Q Consensus 509 s~R~iLafFaG~~~g~-vR~~L~~~w~~~~--~d~~I~~~~p----~g~~~~~~Y~e~m~~SkFCL~P~G~~~~S~RL~E 581 (677)
..|.-.+||+|+..+. .|..|++.-.++. .+..+..... ...... .=.+...+-||-+...|.+ +|.||.-
T Consensus 155 ~~K~p~afWRG~~~~~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~~~~~~~~-~~l~~~~~yKYli~idG~~-~S~Rlky 232 (395)
T PF05686_consen 155 EDKKPKAFWRGSPTVAETRQRLVRCSRSHPDLWDARITKQDWDKEYKPGFKH-VPLEDQCKYKYLIYIDGNA-WSGRLKY 232 (395)
T ss_pred hhcccceEECCCcCCCcchhHHHHHhccCCccceeeechhhhhhhccccccc-cCHHHHhhhheeecCCCce-eehhHHH
Confidence 4677789999998755 4888775433221 1222322100 000111 1234556788989999987 5789999
Q ss_pred HhhcCcEeEEecCCccCCCCc-cCCccceEEEecc-CChhhHHHHHhcC--CHHHHHHHHHHHHh
Q 005796 582 SIFYECVPVIISDNFVPPFYE-VLNWEAFSVIIAE-ENIPNLKDILLSI--PEKKYFEMQFAVRK 642 (677)
Q Consensus 582 Al~~GCIPVIisD~~~LPF~d-vLDW~~fsV~v~e-~di~~L~~iL~sI--s~e~i~~Mq~~v~~ 642 (677)
-|.+|++.+.....|.-=|.+ ..+|.-|.= |.. .+...|.+.++=. .+++..++=++..+
T Consensus 233 lL~c~SvVl~~~~~~~e~f~~~L~P~vHYVP-V~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~ 296 (395)
T PF05686_consen 233 LLACNSVVLKVKSPYYEFFYRALKPWVHYVP-VKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQR 296 (395)
T ss_pred HHcCCceEEEeCCcHHHHHHhhhcccccEEE-eccccchhhHHHHhhhcccChHHHHHHHHHHHH
Confidence 999999999887655433333 347776643 333 3444444444322 24455555444433
No 77
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=63.87 E-value=30 Score=41.78 Aligned_cols=92 Identities=11% Similarity=0.018 Sum_probs=55.3
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCCh--h----hHHHHHhcC
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENI--P----NLKDILLSI 628 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di--~----~L~~iL~sI 628 (677)
+....|+.+...+.|.-++....-++|||.+|| |||.++.-- ..+++.=..-.+.++..+. + .|.++|...
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG--~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGG--AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCC--hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 466778888888888666666788999999996 777777432 2345533445666665543 2 344444433
Q ss_pred CHHHHHHHHHHHH-hhhceeEecc
Q 005796 629 PEKKYFEMQFAVR-KLQRHFLWHA 651 (677)
Q Consensus 629 s~e~i~~Mq~~v~-~v~~hFlw~~ 651 (677)
.. -.+|+++.+ .++.+|-|+.
T Consensus 661 ~~--~~~l~~~ar~~a~~~FS~~~ 682 (694)
T PRK15179 661 AA--DPGIARKAADWASARFSLNQ 682 (694)
T ss_pred hc--cHHHHHHHHHHHHHhCCHHH
Confidence 21 123444443 3445676654
No 78
>PRK10125 putative glycosyl transferase; Provisional
Probab=63.40 E-value=9.9 Score=42.37 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=51.4
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhHHHH
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDI 624 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~i 624 (677)
..+..+.|+.+..++.|.-++....-+.|||++|| |||.+|-=-.| ++++= .-.+.++..|...|.+.
T Consensus 297 ~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~gG~~--Eiv~~-~~G~lv~~~d~~~La~~ 364 (405)
T PRK10125 297 KRKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSDAAR--EVLQK-SGGKTVSEEEVLQLAQL 364 (405)
T ss_pred HHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCCChH--HhEeC-CcEEEECCCCHHHHHhc
Confidence 34567888889988888877777788999999995 88888754333 55643 35788899998887764
No 79
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=60.56 E-value=14 Score=36.46 Aligned_cols=42 Identities=21% Similarity=0.142 Sum_probs=30.7
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCc
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNF 596 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~ 596 (677)
....+.++.+...+.|.-.+....-++||+++| +|||.++.-
T Consensus 268 ~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~~ 309 (381)
T COG0438 268 EELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDVG 309 (381)
T ss_pred HHHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCCC
Confidence 355667888999999854322334499999999 999888753
No 80
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=59.39 E-value=65 Score=33.92 Aligned_cols=83 Identities=18% Similarity=0.167 Sum_probs=52.2
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCC-c------cCCCCccCCccceEEEeccC--ChhhHHHH
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDN-F------VPPFYEVLNWEAFSVIIAEE--NIPNLKDI 624 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~-~------~LPF~dvLDW~~fsV~v~e~--di~~L~~i 624 (677)
.++.+.|..+.+.+++.| ..-++|||.+|+- ||+.+. . ..+.+ .+......+.++.. +...|.+.
T Consensus 244 ~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~P-vv~~~~~~~~~~~~~~~~~-~l~~~g~g~~v~~~~~~~~~l~~~ 317 (350)
T cd03785 244 DDMAAAYAAADLVISRAG----ASTVAELAALGLP-AILIPLPYAADDHQTANAR-ALVKAGAAVLIPQEELTPERLAAA 317 (350)
T ss_pred hhHHHHHHhcCEEEECCC----HhHHHHHHHhCCC-EEEeecCCCCCCcHHHhHH-HHHhCCCEEEEecCCCCHHHHHHH
Confidence 467899999999998776 2448999999985 444331 1 11112 23234566666655 66666665
Q ss_pred HhcC--CHHHHHHHHHHHHh
Q 005796 625 LLSI--PEKKYFEMQFAVRK 642 (677)
Q Consensus 625 L~sI--s~e~i~~Mq~~v~~ 642 (677)
|+.+ .++.+.+|+++.++
T Consensus 318 i~~ll~~~~~~~~~~~~~~~ 337 (350)
T cd03785 318 LLELLSDPERLKAMAEAARS 337 (350)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 5544 46777788776643
No 81
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=58.78 E-value=24 Score=38.90 Aligned_cols=82 Identities=20% Similarity=0.181 Sum_probs=50.6
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCC-----ccceEEEeccCChhhHHHHHhcC-
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLN-----WEAFSVIIAEENIPNLKDILLSI- 628 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLD-----W~~fsV~v~e~di~~L~~iL~sI- 628 (677)
+..+.|+.|.+++..+| ..-+.||+++|| |||+.+.. |=++..+ =..+++.+. +..++.+.+..+
T Consensus 266 ~~~~~~~~aDl~I~k~g----g~tl~EA~a~G~-PvI~~~~~--pgqe~~N~~~~~~~G~g~~~~--~~~~l~~~i~~ll 336 (391)
T PRK13608 266 HMNEWMASSQLMITKPG----GITISEGLARCI-PMIFLNPA--PGQELENALYFEEKGFGKIAD--TPEEAIKIVASLT 336 (391)
T ss_pred hHHHHHHhhhEEEeCCc----hHHHHHHHHhCC-CEEECCCC--CCcchhHHHHHHhCCcEEEeC--CHHHHHHHHHHHh
Confidence 56789999999988544 235899999996 88877632 3333221 123444332 344444444333
Q ss_pred -CHHHHHHHHHHHHhhhc
Q 005796 629 -PEKKYFEMQFAVRKLQR 645 (677)
Q Consensus 629 -s~e~i~~Mq~~v~~v~~ 645 (677)
.++.+.+|+++.++..+
T Consensus 337 ~~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 337 NGNEQLTNMISTMEQDKI 354 (391)
T ss_pred cCHHHHHHHHHHHHHhcC
Confidence 46788899988866544
No 82
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=58.00 E-value=10 Score=42.94 Aligned_cols=86 Identities=9% Similarity=0.040 Sum_probs=57.6
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcE---eEEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc--
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECV---PVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS-- 627 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCI---PVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s-- 627 (677)
..+..+.++.+.-++.|.-.+....-+.|||++||= |||+++.-=.+- . ..-.+.|+..+...+.+.|..
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~--~---~~~g~lv~p~d~~~la~ai~~~l 425 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAE--E---LSGALLVNPYDIDEVADAIHRAL 425 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchh--h---cCCCEEECCCCHHHHHHHHHHHH
Confidence 456778899999999887655555678999999996 689987432211 1 234677888887776665543
Q ss_pred -CCHHHHHHHHHHHHhh
Q 005796 628 -IPEKKYFEMQFAVRKL 643 (677)
Q Consensus 628 -Is~e~i~~Mq~~v~~v 643 (677)
.++++..+|.++.++.
T Consensus 426 ~~~~~e~~~~~~~~~~~ 442 (460)
T cd03788 426 TMPLEERRERHRKLREY 442 (460)
T ss_pred cCCHHHHHHHHHHHHHH
Confidence 3556666665555443
No 83
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=57.30 E-value=17 Score=38.79 Aligned_cols=83 Identities=16% Similarity=0.193 Sum_probs=51.7
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCC-----CCccCCccceEEEeccCC--hhhHHHHHhc
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPP-----FYEVLNWEAFSVIIAEEN--IPNLKDILLS 627 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LP-----F~dvLDW~~fsV~v~e~d--i~~L~~iL~s 627 (677)
++.+.|..+..+++..| ..-++|||++||--|++....... ..+.+--....+.++.++ ...|.+.++.
T Consensus 245 ~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ 320 (357)
T PRK00726 245 DMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLE 320 (357)
T ss_pred hHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHH
Confidence 67899999999999766 245899999998555554321111 112232244567777666 4455555544
Q ss_pred C--CHHHHHHHHHHHH
Q 005796 628 I--PEKKYFEMQFAVR 641 (677)
Q Consensus 628 I--s~e~i~~Mq~~v~ 641 (677)
+ .++...+|+++.+
T Consensus 321 ll~~~~~~~~~~~~~~ 336 (357)
T PRK00726 321 LLSDPERLEAMAEAAR 336 (357)
T ss_pred HHcCHHHHHHHHHHHH
Confidence 4 3566677877653
No 84
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=56.32 E-value=14 Score=40.73 Aligned_cols=85 Identities=11% Similarity=0.072 Sum_probs=49.9
Q ss_pred hHHHhhccceEEEeeCCC-CCCChhHHHHhhcCcEeEEecCCccCCCCccCC---ccceEEEeccCChhhHHHHHhcC--
Q 005796 555 NYIQHMKSSKYCICPKGY-EVNSPRVVESIFYECVPVIISDNFVPPFYEVLN---WEAFSVIIAEENIPNLKDILLSI-- 628 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~-~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLD---W~~fsV~v~e~di~~L~~iL~sI-- 628 (677)
+..+.++.+..|+++... +.+..-++|||++|| |||.+++.. -|.++.+ -..+.+ +..|...|.+.|..+
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~--~~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAI--QVEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeE--EECCHHHHHHHHHHHhc
Confidence 566888999987775433 223455999999997 888776431 1223221 123333 344555555555433
Q ss_pred CHHHHHHHHHHHHhh
Q 005796 629 PEKKYFEMQFAVRKL 643 (677)
Q Consensus 629 s~e~i~~Mq~~v~~v 643 (677)
.++...+|.++.++.
T Consensus 388 ~~~~~~~m~~~a~~~ 402 (425)
T PRK05749 388 DPDARQAYGEAGVAF 402 (425)
T ss_pred CHHHHHHHHHHHHHH
Confidence 466777887766544
No 85
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=54.95 E-value=15 Score=33.26 Aligned_cols=43 Identities=26% Similarity=0.376 Sum_probs=28.7
Q ss_pred eEEEEcCCCCCcccccccccccccHHHHHHHHhcCCccccCCcCCceEEEEe
Q 005796 349 KVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMP 400 (677)
Q Consensus 349 KVYVY~~g~~pi~h~~~l~~iYasE~~F~~~Ll~~S~~rT~DPeEAdLFyVP 400 (677)
|||+...| |-..+|.+|. +...|....--.|.+|++||++++=
T Consensus 1 Kv~i~T~G--------C~~N~~Dse~-i~~~l~~~G~~~~~~~e~AD~iiiN 43 (98)
T PF00919_consen 1 KVYIETLG--------CQMNQYDSER-IASILQAAGYEIVDDPEEADVIIIN 43 (98)
T ss_pred CEEEEECC--------CcccHHHHHH-HHHHHHhcCCeeecccccCCEEEEE
Confidence 56666655 4446677775 4455543223479999999999984
No 86
>PLN02275 transferase, transferring glycosyl groups
Probab=54.82 E-value=65 Score=35.05 Aligned_cols=94 Identities=11% Similarity=0.022 Sum_probs=55.2
Q ss_pred cEEEEecccCCCcchHHHHHHhhcC-CCCceeecCCCCCCCChhhHHHhhccceEEEeeCCC---CCCChhHHHHhhcCc
Q 005796 512 HILAFYAGNLHGYLRPILLKYWKDK-DPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGY---EVNSPRVVESIFYEC 587 (677)
Q Consensus 512 ~iLafFaG~~~g~vR~~L~~~w~~~-~~d~~I~~~~p~g~~~~~~Y~e~m~~SkFCL~P~G~---~~~S~RL~EAl~~GC 587 (677)
.+-+.+.| .|..|..|.+..+.. -.++.+++.. ....++.+.|+.+..|++|... .....-++|||++||
T Consensus 261 ~i~l~ivG--~G~~~~~l~~~~~~~~l~~v~~~~~~----~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~ 334 (371)
T PLN02275 261 RLLFIITG--KGPQKAMYEEKISRLNLRHVAFRTMW----LEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL 334 (371)
T ss_pred CeEEEEEe--CCCCHHHHHHHHHHcCCCceEEEcCC----CCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC
Confidence 46677777 366677666555432 1344444321 1246788999999999876321 112457999999997
Q ss_pred EeEEecCCccCCCCccCCccceEEEec
Q 005796 588 VPVIISDNFVPPFYEVLNWEAFSVIIA 614 (677)
Q Consensus 588 IPVIisD~~~LPF~dvLDW~~fsV~v~ 614 (677)
|||.++.=- ..+++.=....+.++
T Consensus 335 -PVVa~~~gg--~~eiv~~g~~G~lv~ 358 (371)
T PLN02275 335 -PVCAVSYSC--IGELVKDGKNGLLFS 358 (371)
T ss_pred -CEEEecCCC--hHHHccCCCCeEEEC
Confidence 888776321 234443333444444
No 87
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=50.74 E-value=38 Score=39.13 Aligned_cols=94 Identities=12% Similarity=0.051 Sum_probs=57.5
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCC-ccCCCCccCCccceEEEecc----C---C-hhhHHHHH
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDN-FVPPFYEVLNWEAFSVIIAE----E---N-IPNLKDIL 625 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~-~~LPF~dvLDW~~fsV~v~e----~---d-i~~L~~iL 625 (677)
+..+.++.+.-+++|.=.+....-+.|||++|| |||.+|- +-. .++|.=..-.+.++. . + +..|.+.+
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~--~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I 461 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGN--PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKI 461 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCC--HHHccCCCCEEEEeCCccccchhHHHHHHHHHH
Confidence 455777888877877655656688999999998 6776662 222 234422333444441 2 2 34443333
Q ss_pred hc-CCHHHHHHHHHHHHhhhceeEecc
Q 005796 626 LS-IPEKKYFEMQFAVRKLQRHFLWHA 651 (677)
Q Consensus 626 ~s-Is~e~i~~Mq~~v~~v~~hFlw~~ 651 (677)
.. +.++.+.+|.++..+..+.|-|+.
T Consensus 462 ~~ll~~~~~~~~~~~a~~~a~~fs~~~ 488 (500)
T TIGR02918 462 VEYFNSNDIDAFHEYSYQIAEGFLTAN 488 (500)
T ss_pred HHHhChHHHHHHHHHHHHHHHhcCHHH
Confidence 22 246678899888877777776654
No 88
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=47.48 E-value=43 Score=38.28 Aligned_cols=82 Identities=13% Similarity=0.138 Sum_probs=54.9
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEe----EEecCCccCCCCccCCccceEEEeccCChhhHHHHHhc-
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVP----VIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLS- 627 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIP----VIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s- 627 (677)
..+....++.+.-|++|.=.+....-..|||++|+ | ||+++.-=.+ +.+. -++.|+..|...+.+.|..
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~--~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAA--QELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCCh--HHhC---CcEEECCCCHHHHHHHHHHH
Confidence 45778899999999998755445577999999997 7 8888743211 2232 3678888888776665533
Q ss_pred --CCHHHHHHHHHHH
Q 005796 628 --IPEKKYFEMQFAV 640 (677)
Q Consensus 628 --Is~e~i~~Mq~~v 640 (677)
.++++..++.+++
T Consensus 420 L~~~~~er~~r~~~~ 434 (456)
T TIGR02400 420 LTMPLEEREERHRAM 434 (456)
T ss_pred HcCCHHHHHHHHHHH
Confidence 3555554444433
No 89
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=45.84 E-value=77 Score=34.08 Aligned_cols=84 Identities=13% Similarity=0.205 Sum_probs=47.4
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCc----cCCccceE--------------EEeccC
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYE----VLNWEAFS--------------VIIAEE 616 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~d----vLDW~~fs--------------V~v~e~ 616 (677)
+..+.|+.+..++++.|. -..||+.+|| |||+.... -||.. .+....+. +..++.
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKV-SPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEA 326 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEcc-CHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCC
Confidence 457889999999998652 3459999997 66666433 23321 11111111 112333
Q ss_pred ChhhHHHHHhcC--CHHHHHHHHHHHHhhhc
Q 005796 617 NIPNLKDILLSI--PEKKYFEMQFAVRKLQR 645 (677)
Q Consensus 617 di~~L~~iL~sI--s~e~i~~Mq~~v~~v~~ 645 (677)
+..+|.+.+..+ .++...+|.++..++.+
T Consensus 327 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 357 (380)
T PRK00025 327 TPEKLARALLPLLADGARRQALLEGFTELHQ 357 (380)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 344455444443 46677788887755544
No 90
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=41.28 E-value=58 Score=35.23 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=45.8
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCc-----cCCccceEEEeccCChhhHHHHHhcC-
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYE-----VLNWEAFSVIIAEENIPNLKDILLSI- 628 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~d-----vLDW~~fsV~v~e~di~~L~~iL~sI- 628 (677)
+..+.|+.|..+++..| ..-+.|||.+|| |||+.+.. |-.+ .+.-..+.+.+ .+...|.+.+..+
T Consensus 266 ~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~~~--~g~~~~n~~~~~~~G~~~~~--~~~~~l~~~i~~ll 336 (380)
T PRK13609 266 NIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYKPV--PGQEKENAMYFERKGAAVVI--RDDEEVFAKTEALL 336 (380)
T ss_pred hHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECCCC--CCcchHHHHHHHhCCcEEEE--CCHHHHHHHHHHHH
Confidence 45688889987665333 345889999998 57775531 1111 11112344433 3444444444433
Q ss_pred -CHHHHHHHHHHHHhh
Q 005796 629 -PEKKYFEMQFAVRKL 643 (677)
Q Consensus 629 -s~e~i~~Mq~~v~~v 643 (677)
.++.+.+|+++.+++
T Consensus 337 ~~~~~~~~m~~~~~~~ 352 (380)
T PRK13609 337 QDDMKLLQMKEAMKSL 352 (380)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 467788888776553
No 91
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=35.11 E-value=93 Score=32.87 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=26.9
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEe
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVII 592 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIi 592 (677)
.+..+.|+.+..++++.|- -++|++.+| +|+|+
T Consensus 233 ~~m~~lm~~aDl~Is~~G~-----T~~E~~a~g-~P~i~ 265 (279)
T TIGR03590 233 ENMAELMNEADLAIGAAGS-----TSWERCCLG-LPSLA 265 (279)
T ss_pred HHHHHHHHHCCEEEECCch-----HHHHHHHcC-CCEEE
Confidence 4667999999999998762 299999999 67664
No 92
>PLN02846 digalactosyldiacylglycerol synthase
Probab=32.35 E-value=1.4e+02 Score=34.49 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=28.7
Q ss_pred HhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCc
Q 005796 558 QHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNF 596 (677)
Q Consensus 558 e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~ 596 (677)
+.++.+..++.|.-.+-...-+.|||++|+ |||..|.-
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-PVVa~~~~ 333 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-IVVCANHP 333 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCC-cEEEecCC
Confidence 567777777777666556688999999997 78877643
No 93
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=32.02 E-value=1.2e+02 Score=35.33 Aligned_cols=104 Identities=14% Similarity=0.157 Sum_probs=64.7
Q ss_pred hhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecC----CccCCCCccC-CccceEEEeccCChhhHHHHHh-
Q 005796 553 KMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISD----NFVPPFYEVL-NWEAFSVIIAEENIPNLKDILL- 626 (677)
Q Consensus 553 ~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD----~~~LPF~dvL-DW~~fsV~v~e~di~~L~~iL~- 626 (677)
..-+.+..+.|.+=++|.=++|.----..||++|||||+-.- +.+.|+.+.. .=..-.+.+.+.+...|...|+
T Consensus 359 ~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~r 438 (487)
T COG0297 359 EPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRR 438 (487)
T ss_pred HHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHH
Confidence 345678889999999998888877778889999999999765 2445544211 0023334444445554444443
Q ss_pred -----cCCHHHHHHHHHHHHhhhceeEeccCCCCccH
Q 005796 627 -----SIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDL 658 (677)
Q Consensus 627 -----sIs~e~i~~Mq~~v~~v~~hFlw~~~p~~~Da 658 (677)
..++.....+|++.. ...|-|+.....|-.
T Consensus 439 A~~~y~~~~~~w~~~~~~~m--~~d~sw~~sa~~y~~ 473 (487)
T COG0297 439 ALVLYRAPPLLWRKVQPNAM--GADFSWDLSAKEYVE 473 (487)
T ss_pred HHHHhhCCHHHHHHHHHhhc--ccccCchhHHHHHHH
Confidence 223333556665443 367888887665543
No 94
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=29.59 E-value=2.3e+02 Score=30.44 Aligned_cols=85 Identities=13% Similarity=0.260 Sum_probs=49.0
Q ss_pred CCceeecCCCCCCCChhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCC-ccCCCCccCCccceEEEeccC
Q 005796 538 PDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDN-FVPPFYEVLNWEAFSVIIAEE 616 (677)
Q Consensus 538 ~d~~I~~~~p~g~~~~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~-~~LPF~dvLDW~~fsV~v~e~ 616 (677)
+.+.+.+.. +..++...|+.+.+++.+.|- -+.||+.+|| |||.... -..| +.+. ....+.++ .
T Consensus 255 ~~v~~~~~~-----~~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~~~~~~~--e~~~-~g~~~lv~-~ 319 (365)
T TIGR00236 255 KRVHLIEPL-----EYLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLRDTTERP--ETVE-AGTNKLVG-T 319 (365)
T ss_pred CCEEEECCC-----ChHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECCCCCCCh--HHHh-cCceEEeC-C
Confidence 356666543 245788999999999887652 2799999997 6776532 2222 3443 33444554 3
Q ss_pred ChhhHHHHHhcC--CHHHHHHHH
Q 005796 617 NIPNLKDILLSI--PEKKYFEMQ 637 (677)
Q Consensus 617 di~~L~~iL~sI--s~e~i~~Mq 637 (677)
+..+|.+.+..+ .++...+|.
T Consensus 320 d~~~i~~ai~~ll~~~~~~~~~~ 342 (365)
T TIGR00236 320 DKENITKAAKRLLTDPDEYKKMS 342 (365)
T ss_pred CHHHHHHHHHHHHhChHHHHHhh
Confidence 444554444433 234444444
No 95
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=25.15 E-value=1.7e+02 Score=36.11 Aligned_cols=80 Identities=8% Similarity=-0.008 Sum_probs=52.1
Q ss_pred hhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEe----EEecCCccCCCCccCCccceEEEeccCChhhHHHHHh---
Q 005796 554 MNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVP----VIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILL--- 626 (677)
Q Consensus 554 ~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIP----VIisD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~--- 626 (677)
.++...++.+.-|++|.=..-..--..|||++|+ | +|+++--=.+ +.+ ..-++.|+..|+..+.+.+.
T Consensus 367 ~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~-p~~gvlVlSe~~G~~--~~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 367 NYLCALYAITDVMLVTSLRDGMNLVSYEFVACQK-AKKGVLVLSEFAGAG--QSL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHHHHHhCCEEEeCccccccCcchhhHheeec-CCCCCEEeeCCcCch--hhh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 5677899999999998744434466999999998 5 7777632111 122 34588898888876555442
Q ss_pred cCCHHHHHHHHH
Q 005796 627 SIPEKKYFEMQF 638 (677)
Q Consensus 627 sIs~e~i~~Mq~ 638 (677)
.+++++..++.+
T Consensus 442 ~m~~~er~~r~~ 453 (797)
T PLN03063 442 NMSDEERETRHR 453 (797)
T ss_pred hCCHHHHHHHHH
Confidence 345555444333
No 96
>PLN02501 digalactosyldiacylglycerol synthase
Probab=24.44 E-value=1.8e+02 Score=35.78 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=27.9
Q ss_pred HhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCC
Q 005796 558 QHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDN 595 (677)
Q Consensus 558 e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~ 595 (677)
+.++.+..++.|.-.+....-+.|||++|| |||.+|.
T Consensus 614 ~lyasaDVFVlPS~sEgFGlVlLEAMA~Gl-PVVATd~ 650 (794)
T PLN02501 614 DSLHGYKVFINPSISDVLCTATAEALAMGK-FVVCADH 650 (794)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCC-CEEEecC
Confidence 567777776667655555688999999997 7887774
No 97
>PF11862 DUF3382: Domain of unknown function (DUF3382); InterPro: IPR021807 This entry represents the N-terminal domain of the LivHM type high-affinity branched-chain amino acid transport system permease proteins. The domain is about 100 amino acids in length, and is found associated with PF02653 from PFAM.
Probab=24.32 E-value=45 Score=30.36 Aligned_cols=24 Identities=29% Similarity=0.369 Sum_probs=21.2
Q ss_pred hhcch--hHHHHHHHHHHHHhhhhee
Q 005796 12 RVQTR--RWLFVVLVVAVTHLLFQSL 35 (677)
Q Consensus 12 ~~~~r--~~l~~~~~~~~~~~~~q~~ 35 (677)
.+++| .++++||++++..++||.|
T Consensus 35 ~~~~r~~~~~~~V~~~~~~~Fl~qL~ 60 (101)
T PF11862_consen 35 VLEPRWGLLAWWVAVAAAGRFLFQLF 60 (101)
T ss_pred EEEecchHHHHHHHHHHHHHHHHHHH
Confidence 45677 7899999999999999998
No 98
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=23.61 E-value=77 Score=34.96 Aligned_cols=42 Identities=21% Similarity=0.378 Sum_probs=34.4
Q ss_pred hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccC
Q 005796 555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVP 598 (677)
Q Consensus 555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~L 598 (677)
+|+..+.+.|-|+|= |+-... .+.|+|.-|.|||++.++..+
T Consensus 125 ~yp~af~n~kvvvv~-GwDy~~-~~~e~~k~~~~p~~~~n~~~~ 166 (337)
T COG2247 125 DYPNAFKNVKVVVVY-GWDYAD-ALMELMKEGIVPVILKNTSIL 166 (337)
T ss_pred hchhhhcCeEEEEEe-ccccHH-HHHHHHhcCcceeEecccccc
Confidence 688888898999985 665443 899999999999999987543
No 99
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=23.41 E-value=1.4e+02 Score=31.29 Aligned_cols=112 Identities=19% Similarity=0.384 Sum_probs=63.2
Q ss_pred CCCcEEEEecccCCCcchHHHHHHhhcCC-CCceeecCCC-----CCC----CChhhHHHhhccceEEEeeCCCCCCChh
Q 005796 509 SQRHILAFYAGNLHGYLRPILLKYWKDKD-PDMKIFGPMP-----PGV----ASKMNYIQHMKSSKYCICPKGYEVNSPR 578 (677)
Q Consensus 509 s~R~iLafFaG~~~g~vR~~L~~~w~~~~-~d~~I~~~~p-----~g~----~~~~~Y~e~m~~SkFCL~P~G~~~~S~R 578 (677)
.++.+|++|.|.-.+ .+.+.++.-. ..+.+++.-. ... ....++.+.|..+..+++-.|++ -
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~~~~~~v~g~~~~~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~----t 262 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALPDYQFIVFGPNAADPRPGNIHVRPFSTPDFAELMAAADLVISKGGYT----T 262 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCCCCeEEEEcCCcccccCCCEEEeecChHHHHHHHHhCCEEEECCCHH----H
Confidence 456789999885444 3444444322 3455554211 000 12367889999999999999976 3
Q ss_pred HHHHhhcCcEeEEecCCc---cCCC-CccCCccceEEEeccCCh--hhHHHHHhcCC
Q 005796 579 VVESIFYECVPVIISDNF---VPPF-YEVLNWEAFSVIIAEENI--PNLKDILLSIP 629 (677)
Q Consensus 579 L~EAl~~GCIPVIisD~~---~LPF-~dvLDW~~fsV~v~e~di--~~L~~iL~sIs 629 (677)
+.||+.+|+ |+|+-+.. ...+ ...+.=..+.+.++.+++ .+|.+.|+++|
T Consensus 263 ~~Ea~~~g~-P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~~ 318 (318)
T PF13528_consen 263 ISEALALGK-PALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERLP 318 (318)
T ss_pred HHHHHHcCC-CEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcCC
Confidence 789998885 65543321 1111 001222344555554444 45666666654
No 100
>KOG3185 consensus Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis]
Probab=22.51 E-value=62 Score=33.29 Aligned_cols=32 Identities=19% Similarity=0.423 Sum_probs=27.2
Q ss_pred cceEEEeeCCCCCCChhHHHHhhcCcEeEEec
Q 005796 562 SSKYCICPKGYEVNSPRVVESIFYECVPVIIS 593 (677)
Q Consensus 562 ~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIis 593 (677)
.-+|||+..|-+-+=..+|||=..+.|||+-.
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~t 51 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVHT 51 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEEe
Confidence 34799999998877788999999999999854
No 101
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=21.94 E-value=2.5e+02 Score=25.38 Aligned_cols=15 Identities=33% Similarity=0.534 Sum_probs=11.9
Q ss_pred hHHHHHHHHHHHHhh
Q 005796 17 RWLFVVLVVAVTHLL 31 (677)
Q Consensus 17 ~~l~~~~~~~~~~~~ 31 (677)
|-|||+|++||+.-|
T Consensus 3 RRlwiLslLAVtLtV 17 (100)
T PF05984_consen 3 RRLWILSLLAVTLTV 17 (100)
T ss_pred hhhHHHHHHHHHHHH
Confidence 447889999998776
No 102
>PF07038 DUF1324: Protein of unknown function (DUF1324); InterPro: IPR009757 This family consists of several Circovirus proteins of around 60 residues in length. The function of this family is unknown.
Probab=20.58 E-value=70 Score=25.82 Aligned_cols=39 Identities=23% Similarity=0.484 Sum_probs=28.3
Q ss_pred ccceEEEeeCCC-CCCChhHHHHhhcCcEeEEecCCccCCCCc
Q 005796 561 KSSKYCICPKGY-EVNSPRVVESIFYECVPVIISDNFVPPFYE 602 (677)
Q Consensus 561 ~~SkFCL~P~G~-~~~S~RL~EAl~~GCIPVIisD~~~LPF~d 602 (677)
-+|+||+.|--+ +..++|-|-.-..||----+. .||.+.
T Consensus 7 fqsrfcifpltfkssasprkfltnvtgccsatvt---rlplsn 46 (59)
T PF07038_consen 7 FQSRFCIFPLTFKSSASPRKFLTNVTGCCSATVT---RLPLSN 46 (59)
T ss_pred EeeeeEEEEeeeccCCChHHHhhcccceeeeeEE---eccchh
Confidence 479999999776 346899998889999764432 456543
Done!