Query         005797
Match_columns 677
No_of_seqs    501 out of 2215
Neff          6.9 
Searched_HMMs 13730
Date          Mon Mar 25 07:39:59 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005797.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005797hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1p16a2 d.142.2.3 (A:1-245) mR 100.0 1.2E-42 8.7E-47  353.8  18.5  228  311-549    11-245 (245)
  2 d1i9sa_ c.45.1.1 (A:) mRNA cap 100.0 7.5E-42 5.4E-46  336.6  20.4  192   85-279     1-192 (194)
  3 d1ckma2 d.142.2.3 (A:11-238) R 100.0 9.1E-37 6.6E-41  307.5  18.5  212  307-549    11-228 (228)
  4 d1ohea2 c.45.1.1 (A:199-380) P  99.9 1.1E-22 7.8E-27  197.0  18.1  144  100-258    22-165 (182)
  5 d1x9na3 d.142.2.1 (A:534-753)   99.9 1.7E-22 1.2E-26  201.3  15.1  172  355-549    19-215 (220)
  6 d1rxda_ c.45.1.1 (A:) Protein   99.9   2E-21 1.5E-25  182.2  15.0  137  102-259     9-145 (152)
  7 d1mkpa_ c.45.1.1 (A:) Mapk pho  99.8 3.4E-20 2.5E-24  172.2   8.6  116  139-261    28-143 (144)
  8 d1d5ra2 c.45.1.1 (A:14-187) Ph  99.8 9.8E-19 7.2E-23  167.6  17.8  149  100-260    15-167 (174)
  9 d1vhra_ c.45.1.1 (A:) VH1-rela  99.8 1.5E-19 1.1E-23  174.1  11.5  121  139-264    47-172 (178)
 10 d1p16a1 b.40.4.6 (A:246-390) m  99.8 1.5E-19 1.1E-23  167.5  11.0  100  550-651     1-132 (145)
 11 d1ckma1 b.40.4.6 (A:239-327) R  99.8 1.4E-19 9.9E-24  152.2   8.9   86  551-646     2-87  (89)
 12 d1fpza_ c.45.1.1 (A:) Kinase a  99.8 6.8E-19 4.9E-23  169.1  12.6  125  131-262    40-172 (176)
 13 d1m3ga_ c.45.1.1 (A:) Mapk pho  99.8 4.6E-20 3.3E-24  171.8   3.0  116  139-263    28-143 (145)
 14 d1a0ia2 d.142.2.1 (A:2-240) AT  99.7 2.3E-17 1.7E-21  165.0   8.9  180  349-547     9-239 (239)
 15 d1fvia2 d.142.2.1 (A:2-189) AT  99.5 3.3E-14 2.4E-18  136.9   9.9  153  364-547    19-187 (188)
 16 d1xria_ c.45.1.1 (A:) Putative  99.3 3.4E-13 2.5E-17  125.4   6.7  111  126-243    22-133 (151)
 17 d2pt0a1 c.45.1.4 (A:34-346) My  98.9 2.5E-09 1.8E-13  109.9  11.8   80  158-243   175-255 (313)
 18 d1lara2 c.45.1.2 (A:1628-1876)  98.6 2.4E-07 1.8E-11   92.0  14.3  142  102-258    54-241 (249)
 19 d1g4us2 c.45.1.2 (S:297-539) S  98.6 1.3E-07 9.6E-12   93.7  12.1   90  171-260   143-239 (243)
 20 d1p15a_ c.45.1.2 (A:) Protein-  98.5   2E-07 1.5E-11   92.4  11.0   88  171-260   148-240 (245)
 21 d1jlna_ c.45.1.2 (A:) Tyrosine  98.5 5.2E-07 3.8E-11   92.0  13.6  141  103-258   102-284 (297)
 22 d1rpma_ c.45.1.2 (A:) Tyrosine  98.5 3.8E-07 2.8E-11   92.1  12.4   85  171-258   183-272 (278)
 23 d1lara1 c.45.1.2 (A:1307-1623)  98.5 5.9E-07 4.3E-11   92.5  14.1   84  172-258   183-271 (317)
 24 d1wcha_ c.45.1.2 (A:) Tyrosine  98.4 5.4E-07   4E-11   92.4  11.7   83  171-258   207-294 (308)
 25 d2shpa1 c.45.1.2 (A:219-525) T  98.3 9.5E-07 6.9E-11   90.5  11.8   87  171-258   205-299 (307)
 26 d1s68a_ d.142.2.4 (A:) RNA lig  98.3 9.7E-07   7E-11   86.5  10.5  184  360-549    24-229 (233)
 27 d1l8ka_ c.45.1.2 (A:) Tyrosine  98.3 1.5E-06 1.1E-10   87.4  10.6   87  171-258   176-267 (273)
 28 d2f71a1 c.45.1.2 (A:2-298) Tyr  98.2 1.9E-06 1.4E-10   87.6  10.6   86  171-257   178-271 (297)
 29 d1fpra_ c.45.1.2 (A:) Tyrosine  98.2 1.3E-06 9.6E-11   88.3   9.1   86  171-257   175-268 (284)
 30 d1lyva_ c.45.1.2 (A:) Protein-  98.2 4.2E-06 3.1E-10   84.4  12.0   63  200-262   210-276 (283)
 31 d1yfoa_ c.45.1.2 (A:) Tyrosine  98.1 3.1E-06 2.3E-10   85.6  10.0   83  172-257   193-280 (288)
 32 d1ywfa1 c.45.1.5 (A:4-275) Pho  97.9 6.3E-06 4.6E-10   82.7   7.8   41  200-241   149-189 (272)
 33 d1ohea1 c.45.1.1 (A:42-198) Pr  97.3 0.00037 2.7E-08   63.2   9.0   71  172-244    46-120 (157)
 34 d1b04a_ d.142.2.2 (A:) Adenyla  93.3    0.41   3E-05   47.4  13.6  161  363-550   105-311 (312)
 35 d1ta8a_ d.142.2.2 (A:) Adenyla  91.8     1.2 8.5E-05   43.8  14.7  157  364-549   109-313 (313)
 36 d1dgsa3 d.142.2.2 (A:1-314) Ad  89.8     1.8 0.00013   42.6  13.7  160  364-549   109-314 (314)
 37 d1qxna_ c.46.1.3 (A:) Polysulf  79.2     3.9 0.00028   34.8   9.0   79  125-229    25-107 (137)
 38 d1zsqa2 c.45.1.3 (A:199-585) M  69.6       3 0.00022   42.2   6.4   25  200-224   211-235 (387)
 39 d1gmxa_ c.46.1.3 (A:) Sulfurtr  67.7     7.7 0.00056   31.1   7.7   78  125-230     7-84  (108)
 40 d1rhsa2 c.46.1.2 (A:150-293) R  64.0     4.5 0.00033   34.7   5.7   94  124-230    12-117 (144)
 41 d1tq1a_ c.46.1.3 (A:) Thiosulf  60.4     1.1 7.9E-05   37.3   0.7   28  199-229    70-97  (119)
 42 d1xdna_ d.142.2.4 (A:) RNA edi  53.2      22  0.0016   33.3   8.8  108  359-467    24-185 (265)
 43 d2gwfa1 c.46.1.4 (A:181-315) U  40.8      27  0.0019   28.4   6.7   83  126-215     4-87  (135)
 44 d1yt8a1 c.46.1.2 (A:107-242) T  39.7      38  0.0027   28.0   7.6   81  124-229    25-105 (136)
 45 d1skza1 g.3.15.1 (A:7-58) Fact  37.6       2 0.00015   29.0  -1.1   19  198-216    21-39  (52)
 46 d1yt8a4 c.46.1.2 (A:243-372) T  33.3      17  0.0013   30.0   4.1   81  125-229    25-105 (130)
 47 d3e46a1 a.5.2.1 (A:157-198) Ub  30.9      21  0.0015   23.1   3.1   28  208-238    14-41  (42)
 48 d1yt8a2 c.46.1.2 (A:6-106) Thi  26.9 1.2E+02  0.0087   22.8   8.4   29  199-230    56-84  (101)
 49 d1urha2 c.46.1.2 (A:149-268) 3  26.4      40  0.0029   26.7   5.2   30  198-230    79-108 (120)
 50 d1uara2 c.46.1.2 (A:145-285) S  25.4      62  0.0045   26.9   6.5   29  199-229    87-115 (141)
 51 d1iiba_ c.44.2.1 (A:) Enzyme I  22.1      10 0.00076   30.5   0.5   12  202-213     2-13  (103)
 52 d1e0ca2 c.46.1.2 (A:136-271) S  21.6      40  0.0029   27.9   4.3   29  198-229    85-113 (136)
 53 d2jfga1 c.5.1.1 (A:1-93) UDP-N  20.5      37  0.0027   25.9   3.6   27  200-230     4-30  (93)

No 1  
>d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]}
Probab=100.00  E-value=1.2e-42  Score=353.85  Aligned_cols=228  Identities=29%  Similarity=0.499  Sum_probs=187.4

Q ss_pred             CCCCCccChhHHHHHHHHHHHhhhcccCCCCCCCCCCCcccccchhchh-hhccCCeEEEEcccceEEEEEEEC-----C
Q 005797          311 DVLGDEIPNDQQDAFRHFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNLQ-LLRQRYYYATWKADGTRYMMLITI-----D  384 (677)
Q Consensus       311 ~~~g~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~FPGsqPVsl~r~nl~-~l~~~~Y~V~eK~DG~R~ll~i~~-----~  384 (677)
                      ++||+.++++.++.+|..|+++|++     ...+|||||||||+|+||. .|.+++|+||||+||+||||++..     .
T Consensus        11 ~~pg~~~~~~~~~~~~~~v~~~~~~-----~~~~FpG~qPvs~~~~~~~~~L~~~~Y~v~eK~DG~R~lL~i~~~~~~~~   85 (245)
T d1p16a2          11 VIPGNKLDEEETKELRLMVAELLGR-----RNTGFPGSQPVSFERRHLEETLMQKDYFVCEKTDGLRCLLFLINDPDKGE   85 (245)
T ss_dssp             CCSSEECCHHHHHHHHHHHHHHHTC-----SCCSCCCEEEEECCHHHHHTHHHHSCEEEEEEECSEEEEEEEEEETTTEE
T ss_pred             CCCCCcCCHHHHHHHHHHHHHHHCC-----CCCCCCCCCcccccHHHHHhhhCcCCEEEEECcCCeEEEEEEEEcCCCce
Confidence            4789999999999999999999965     3478999999999999996 488899999999999999999963     3


Q ss_pred             EEEEEeCCCccccc-cCcCCCcCCCCcccccCCCCeeeeEEEEEecCCCCCCceeEEEEeEEeecCCccccCCCHHHHHH
Q 005797          385 GCYLIDRCFNFRRV-QMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWK  463 (677)
Q Consensus       385 ~vyLidR~~~~~~v-~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~  463 (677)
                      ++||+||+++++.+ ...||............+.+|+||||+|.++.... +..++|+|||+++++|+++++.||.+|++
T Consensus        86 ~~~li~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~tilDGElv~~~~~~~-~~~~~~~ifDil~~~g~~l~~~~l~~R~~  164 (245)
T d1p16a2          86 GVFLVTRENDYYFIPNIHFPLSVNETREKPTYHHGTLLDGELVLENRNVS-EPVLRYVIFDALAIHGKCIIDRPLPKRLG  164 (245)
T ss_dssp             EEEEEETTCCEEECCSCCCCSCTTCCSSSCCCCSSEEEEEEEEEECCSSS-CCEEEEEEEEEEEETTEECTTSCHHHHHH
T ss_pred             EEEEEeCCCCeEEccccccccccccccccccccCCeeEEEEEEeecccCC-cceEEEEEeeehhhCCceeeeccHHHHHH
Confidence            68999999986544 57777654433333345689999999999875443 24689999999999999999999999999


Q ss_pred             HHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCe
Q 005797          464 MLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGL  543 (677)
Q Consensus       464 ~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~~l  543 (677)
                      +|++.+..++....+..    .........+|.+..|+|+.++.+..+++ .++++.|++|||||||.++||++||+..|
T Consensus       165 ~l~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~k~~~~~~~~~~l~~-~~~~~~~~~DGLIf~p~~~pY~~Gr~~~~  239 (245)
T d1p16a2         165 YITENVMKPFDNFKKHN----PDIVNSPEFPFKVGFKTMLTSYHADDVLS-KMDKLFHASDGLIYTCAETPYVFGTDQTL  239 (245)
T ss_dssp             HHHHHTHHHHHHHHHHC----HHHHSCTTSCCEEEECCCEEGGGTHHHHT-TGGGCSSCEEEEEEEESSSCCCSEEEEEE
T ss_pred             HHHHHHHHhhhhhhhcc----cccccchhhhhhhhhhhhhhHHHHHHHHH-HhhhcCCCCCeEEEEcCCCCEeCCCCCCe
Confidence            99998877654332100    00011235678999999999999999886 47889999999999999999999999999


Q ss_pred             EEEccC
Q 005797          544 LKWKYA  549 (677)
Q Consensus       544 LKWKp~  549 (677)
                      |||||.
T Consensus       240 lKWKP~  245 (245)
T d1p16a2         240 LKWKPA  245 (245)
T ss_dssp             EEECCG
T ss_pred             EEeCCC
Confidence            999984


No 2  
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=7.5e-42  Score=336.57  Aligned_cols=192  Identities=38%  Similarity=0.752  Sum_probs=178.8

Q ss_pred             CCCCCCccCCCCCCcccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCc
Q 005797           85 KLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI  164 (677)
Q Consensus        85 ~lp~~W~~~~~~g~~I~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI  164 (677)
                      +||++|++||++|++|+++|||||+|+++.+++.++.+.+|++.++++.++..+.++++|||||++.++|++++|+..||
T Consensus         1 klP~~W~~~~~~~~~I~~~fIa~k~Pl~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~~vinlt~~~~~Y~~~~~~~~gi   80 (194)
T d1i9sa_           1 KIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLLVDLTNTSRFYDRNDIEKEGI   80 (194)
T ss_dssp             CCCTTCTTSCSBCCCBTTTEEEECCCCCGGGTTTSCGGGCCCHHHHHHHHHHTTCCEEEEEECSSCSSSSCTHHHHTTTC
T ss_pred             CCCchhhcCCCCCCEeCCCEEEecCCCCcCcccccCccccCCHHHHHHHHHhhCCCceEEEEccCCCCCcCHHHHHhcCc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCC
Q 005797          165 KHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPP  244 (677)
Q Consensus       165 ~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~  244 (677)
                      .|+++|+.|.+.+|+.+.+..|++.+..|++  .++++.|+|||++|+||||+|||||||.+.||++++|+++|+++||+
T Consensus        81 ~~~~~~~~~~~~~P~~~~~~~f~~~v~~~~~--~~~~~~V~VHC~~G~~Rsg~~i~ayL~~~~~~s~~~Ai~~~~~~Rp~  158 (194)
T d1i9sa_          81 KYIKLQCKGHGECPTTENTETFIRLCERFNE--RSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPP  158 (194)
T ss_dssp             EEEECCCCCTTCCCCHHHHHHHHHHHTTC-------CCEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTT
T ss_pred             eEEEecCCCCCCCCChHHHHHHHHHHHHHHH--hCCCCeEEEECCCCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHCCC
Confidence            9999999887679999999999999998887  45688999999999999999999999999999999999999999999


Q ss_pred             CcCCHHHHHHHHHHHhhcCCCCCCCCCCCcccccc
Q 005797          245 GIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKREL  279 (677)
Q Consensus       245 ~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~~~  279 (677)
                      ++++++|+++|+++|.+... .+++|+.|+|++++
T Consensus       159 ~i~~~~~~~~L~~~y~~~~~-~~~~~~~p~w~~~~  192 (194)
T d1i9sa_         159 GIYKGDYLKELFRRYGDIEE-APPPPVLPDWCFED  192 (194)
T ss_dssp             CCCCHHHHHHHHHHHSCGGG-CCCCCCCCGGGGTT
T ss_pred             CCCCHHHHHHHHHHHHhhcc-CCCCCCCCCccCCC
Confidence            99999999999999998876 57799999999855


No 3  
>d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=100.00  E-value=9.1e-37  Score=307.50  Aligned_cols=212  Identities=20%  Similarity=0.351  Sum_probs=167.6

Q ss_pred             ccCCCCCCCccChhHHHHHHHHHHHhhhcccCCCCCCCCCCCcccccchhchhhhccCCeEEEEcccceEEEEEEEC---
Q 005797          307 MTNDDVLGDEIPNDQQDAFRHFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITI---  383 (677)
Q Consensus       307 ~~~~~~~g~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~FPGsqPVsl~r~nl~~l~~~~Y~V~eK~DG~R~ll~i~~---  383 (677)
                      +.+.+..+.++..+.++.+......+..   ......+|||+|||||+++|+..|.+++|+||||+||+|++|++..   
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~f~g~~pvsl~~~~~~~l~~~~Y~vseK~DG~R~ll~~~~~~~   87 (228)
T d1ckma2          11 LNGLQIKLHKVVGESRDDIVAKMKDLAM---DDHKFPRLPGPNPVSIERKDFEKLKQNKYVVSEKTDGIRFMMFFTRVFG   87 (228)
T ss_dssp             ETTEEEEEEEECHHHHHHHHHHHHHHTT---CCCSSCCCSSEEEEECCGGGHHHHHHSCEEEEEEECSEEEEEEEEEETT
T ss_pred             EecccccceeeechhHHHHHHHHHHHhc---CCCCCCcCCCCCCcccchHHHhhhccCCeEEEEeecCEEEEEEEEecCC
Confidence            3344444555655555555555555542   2344578999999999999999999999999999999999999974   


Q ss_pred             -CEEEEEeCCCcccccc-CcCCCcCCCCcccccCCCCeeeeEEEEEecCCCCCCceeEEEEeEEeecCCccccCCCHHHH
Q 005797          384 -DGCYLIDRCFNFRRVQ-MRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYER  461 (677)
Q Consensus       384 -~~vyLidR~~~~~~v~-~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR  461 (677)
                       +.+||+||++.++..+ ..+|         +....+||||||+|.++..    ..+.|+||||++++|.++++.||.+|
T Consensus        88 ~~~~~li~r~~~~~~~~~~~~~---------~~~~~~ti~DGEli~~~~~----~~~~f~ifD~l~~~g~~~~~~pf~~R  154 (228)
T d1ckma2          88 FKVCTIIDRAMTVYLLPFKNIP---------RVLFQGSIFDGELCVDIVE----KKFAFVLFDAVVVSGVTVSQMDLASR  154 (228)
T ss_dssp             EEEEEEECTTCCEEECCCSCCC---------TTGGGCEEEEEEEEEETTT----TEEEEEEEEEEEETTEECTTSCHHHH
T ss_pred             ceEEEEEeCCCceEEcccccCc---------hhhcCCceEeEEEEeeccc----ccceEEEeeEEEEcCcchhcCChHHH
Confidence             3689999999865433 1122         1235789999999987643    46889999999999999999999999


Q ss_pred             HHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHHHHh-cccccCCCceEEEEeCCCCCccCCC
Q 005797          462 WKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF-IPKLSHDADGLVFQGWDDPYVPRTH  540 (677)
Q Consensus       462 ~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~-~~~l~h~~DGLIf~p~~spY~~G~~  540 (677)
                      +.+|++.+.....               ....++.++.|+|+.......+++.+ .....|++|||||+|.++||++||+
T Consensus       155 l~~L~~~l~~~~~---------------~~~~~~~i~~k~~~~~~~~~~l~~~~~~~~~~y~~DGLIf~p~~~pY~~Gr~  219 (228)
T d1ckma2         155 FFAMKRSLKEFKN---------------VPEDPAILRYKEWIPLEHPTIIKDHLKKANAIYHTDGLIIMSVDEPVIYGRN  219 (228)
T ss_dssp             HHHHHHHHTTCCC---------------CTTSSSEEEECCCEETTCHHHHHHHHHHHHHHSCEEEEEEEESSSCCCCEEE
T ss_pred             HHHHHHHHhhhhc---------------cccCceeEEeeeeeehhhHHHHHHHHhhhccCCCCceEEEEeCCCCEeCCCC
Confidence            9999997744321               12456789999999999988887755 3467899999999999999999999


Q ss_pred             CCeEEEccC
Q 005797          541 EGLLKWKYA  549 (677)
Q Consensus       541 ~~lLKWKp~  549 (677)
                      ..||||||+
T Consensus       220 ~~~~KWKP~  228 (228)
T d1ckma2         220 FNLFKLKPG  228 (228)
T ss_dssp             EEEEEECST
T ss_pred             CCeEEeCCC
Confidence            999999995


No 4  
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=1.1e-22  Score=196.96  Aligned_cols=144  Identities=22%  Similarity=0.276  Sum_probs=118.5

Q ss_pred             ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCC
Q 005797          100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD  179 (677)
Q Consensus       100 I~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~  179 (677)
                      ++++||+|+.|....+....  ....++.++++.++.  .+|++|||||  .+.|+++.+...||+|+++|+.|+ .+|+
T Consensus        22 ~P~~~ia~s~P~~~~~~~~~--~~~~~~~~~l~~l~~--~gi~~Ii~l~--~~~~~~~~~~~~gi~~~~~p~~D~-~~P~   94 (182)
T d1ohea2          22 IPDRFIAFCGPHSRARLESG--YHQHSPETYIQYFKN--HNVTTIIRLN--KRMYDAKRFTDAGFDHHDLFFADG-STPT   94 (182)
T ss_dssp             ETTTEEEECCCCSSCBCSTT--CCBCCTHHHHHHHHH--TTEEEEEECS--CCSSCTHHHHTTTCEEEECCCCTT-CCCC
T ss_pred             ccCCeEEEcCCCcccccccc--ccccCHHHHHHHHHh--cCCCEEEEec--CCCcCccccccCCcEEEecCCCCC-CCcC
Confidence            46899999999776554332  235678888888876  4699999999  457889999999999999999997 7899


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005797          180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF  258 (677)
Q Consensus       180 ~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~  258 (677)
                      .+++.+|++.+       ...+++|+|||++|.||||+++|||||...||++++|+++++++||.++..+.+ ..|..+
T Consensus        95 ~~~i~~~i~~~-------~~~~~~V~VHC~~G~gRsgt~~a~yL~~~~~~~~~~Al~~vr~~Rp~~i~~~qq-~fl~~~  165 (182)
T d1ohea2          95 DAIVKEFLDIC-------ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ-QFLVMK  165 (182)
T ss_dssp             HHHHHHHHHHH-------HSCSSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCTHHH-HHHHHH
T ss_pred             HHHHHHHHHHH-------HcCCCcEEEEeCCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHCCCCccCHHH-HHHHHH
Confidence            88877766543       356889999999999999999999999999999999999999999988876533 444443


No 5  
>d1x9na3 d.142.2.1 (A:534-753) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88  E-value=1.7e-22  Score=201.31  Aligned_cols=172  Identities=15%  Similarity=0.193  Sum_probs=120.0

Q ss_pred             hhchhhhccCCeEEEEcccceEEEEEEE-CCEEEEEeCCCccccccCcCCCcCCC-CcccccCCCCeeeeEEEEEecCCC
Q 005797          355 SDNLQLLRQRYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFRRVQMRFPCRNSN-EGLGEKTHHFTLLDGEMIIDKLPD  432 (677)
Q Consensus       355 r~nl~~l~~~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~~v~~~FP~~~~~-~~~~~~~~~~tlLDGElV~d~~~~  432 (677)
                      .+.+..+...+|+|++|+||+|+++++. ++++.+++|++.  .++..||+.... ..+......+.+||||||.....+
T Consensus        19 ~~~~~~~~~~~~~~e~K~DG~R~~i~~~~~~~v~l~SR~g~--~~t~~~p~l~~~~~~~~~~~~~~~iLDGEl~~~d~~~   96 (220)
T d1x9na3          19 SEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQE--DNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREK   96 (220)
T ss_dssp             HHHHHHTTTSCEEEEEEESSEEEEEEECTTSCEEEECTTSC--BCTTTCHHHHHTSGGGBCTTCCCEEEEEEEEEECTTT
T ss_pred             HHHHhhcCCCcEEEEEeECcEEEEEEEECCCEEEEEeCCCc--cccccchhHHHHHHHhhcCCCcceeeeeeeEEecCCC
Confidence            3444556677999999999999998874 567999999987  335567754221 111111235689999998643211


Q ss_pred             C--------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCC
Q 005797          433 S--------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDL  492 (677)
Q Consensus       433 ~--------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~  492 (677)
                      .                    ....+.|+|||||+++|++++++||.+|+++|++.+.....                  
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vFDil~~~g~~~~~~p~~eR~~~L~~~~~~~~~------------------  158 (220)
T d1x9na3          97 KQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEG------------------  158 (220)
T ss_dssp             CSBCCHHHHTTSCSSCCCGGGCCSEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCBTT------------------
T ss_pred             CccchHHHHhhhhhcccchhhhccccceEEEEEEEECCcchhhhhHHHHHHHHHHHhccCCC------------------
Confidence            0                    01247899999999999999999999999999986532110                  


Q ss_pred             CCcEEEecceEEchhHHHHHHHhcccccCCCceEEEEe--CCCCCccCC-CCCeEEEccC
Q 005797          493 EPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQG--WDDPYVPRT-HEGLLKWKYA  549 (677)
Q Consensus       493 ~pf~i~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p--~~spY~~G~-~~~lLKWKp~  549 (677)
                       +  +.....+..++.+.+.+-+...+.++.||||+|.  .+++|.+|+ +..|+||||.
T Consensus       159 -~--~~~~~~~~~~~~~~~~~~~~~~~~~g~EGim~K~~~~~s~Y~~GkRs~~w~K~K~e  215 (220)
T d1x9na3         159 -E--FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKD  215 (220)
T ss_dssp             -T--EEECCEECCCCHHHHHHHHHHHHHTSEEEEEEEESSSSCSSCTTTCSEEEEEEEHH
T ss_pred             -e--EEEEEeeccCCHHHHHHHHHHHHHCCCceEEEeccCCCCCeecCCcCCCeEEEccc
Confidence             1  3344455555544443333346778999999994  589999994 7789999984


No 6  
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]}
Probab=99.85  E-value=2e-21  Score=182.15  Aligned_cols=137  Identities=19%  Similarity=0.279  Sum_probs=114.8

Q ss_pred             CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHH
Q 005797          102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNA  181 (677)
Q Consensus       102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e  181 (677)
                      .+||++..|+..+..            +.++.+..  .+|++||+|+  ++.|+++.++..||.|+++|+.|+ .+|+.+
T Consensus         9 ~rfI~tq~P~~~t~~------------~f~~~l~~--~~i~~Iv~l~--e~~y~~~~~~~~~i~~~~~~~~d~-~~p~~~   71 (152)
T d1rxda_           9 MRFLITHNPTNATLN------------KFIEELKK--YGVTTIVRVC--EATYDTTLVEKEGIHVLDWPFDDG-APPSNQ   71 (152)
T ss_dssp             EEEEECCCCCGGGHH------------HHHHHHHH--TTEEEEEECS--CCCSCCHHHHHTTCEEEECCC--C-CCCCHH
T ss_pred             ceEEEECCCCchhHH------------HHHHHHHH--hCCeEEeecc--cccCCchheeecceEEEEeeCCCC-CCCCHH
Confidence            479999999887544            34444443  5799999998  457899999999999999999997 789999


Q ss_pred             HHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHH
Q 005797          182 SVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFY  259 (677)
Q Consensus       182 ~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y  259 (677)
                      .+..|+..+..++.  ...+++|+|||++|.||||+++|||||. .||++++|++.++++||+++. ..|+..|..|.
T Consensus        72 ~~~~~~~~~~~~~~--~~~~~~v~VHC~~G~gRsg~~~a~~l~~-~~~~~~~av~~vr~~R~~~i~-~~Q~~fl~~y~  145 (152)
T d1rxda_          72 IVDDWLSLVKIKFR--EEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAFN-SKQLLYLEKYR  145 (152)
T ss_dssp             HHHHHHHHHHHHHH--HSTTCEEEEECSSSSTTHHHHHHHHHHH-TTCCHHHHHHHHHTTCTTCCC-HHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHH--hCCCCCEEEEEcCCcccHHHHHHHHHHH-hCcCHHHHHHHHHHhCCCCCc-hHHHHHHHHHH
Confidence            99999999988887  4568999999999999999999999998 599999999999999998875 45777766643


No 7  
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]}
Probab=99.80  E-value=3.4e-20  Score=172.17  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=97.6

Q ss_pred             CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005797          139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM  218 (677)
Q Consensus       139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l  218 (677)
                      .+|++|||++.+.+.+   .....++.|+++|+.|.+. +   ++.+.+..+.+||.++...+++|||||.+|.||||++
T Consensus        28 ~gI~~Iin~~~~~~~~---~~~~~~~~y~~~~~~D~~~-~---~i~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v  100 (144)
T d1mkpa_          28 FGIKYILNVTPNLPNL---FENAGEFKYKQIPISDHWS-Q---NLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTV  100 (144)
T ss_dssp             TTEEEEEECCSSCCCE---EEEETTEEEEECCCCCSTT-C---CSGGGHHHHHHHHHHHHHTTCEEEEECSSCSHHHHHH
T ss_pred             CCCcEEEEccccCCcc---ccCCCceEEEEEEEecCCC-C---CHHHHHHHHHHHHHHhhhccceEEEEecccccchHHH
Confidence            6899999998764322   2345689999999998632 2   2344566777888877778999999999999999999


Q ss_pred             HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhh
Q 005797          219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE  261 (677)
Q Consensus       219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~  261 (677)
                      ++||||.+.||++++|+++++++||.+.+|.+|+.||.+|.+.
T Consensus       101 v~aYLm~~~~~~~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~  143 (144)
T d1mkpa_         101 TVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERT  143 (144)
T ss_dssp             HHHHHHHHHTCCHHHHHHHHHHHCTTCCCCSTTHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999888764


No 8  
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79  E-value=9.8e-19  Score=167.55  Aligned_cols=149  Identities=21%  Similarity=0.338  Sum_probs=121.9

Q ss_pred             ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCC
Q 005797          100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD  179 (677)
Q Consensus       100 I~~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~  179 (677)
                      |+.+||+|..|...     .+...+....+++..++.+..+...++|++. .+.|+...+   +++++.+|+.|+ .+|+
T Consensus        15 It~riiv~~~P~~~-----~e~~~~~~i~~v~~~l~~~~~~~~~v~nl~~-~~~y~~~~~---~~~~~~~~~~d~-~~Ps   84 (174)
T d1d5ra2          15 IYPNIIAMGFPAER-----LEGVYRNNIDDVVRFLDSKHKNHYKIYNLCA-ERHYDTAKF---NCRVAQYPFEDH-NPPQ   84 (174)
T ss_dssp             EETTEEEECCCBSS-----CCTTCCCBHHHHHHHHHHHSSSCEEEEEEES-SCCCCTTSC---SSCEEEEEECTT-SCCC
T ss_pred             EeCCEEEEeCCCCC-----cHHhhcCCHHHHHHHHHhccCCcEEEEeccc-CCCCChHHc---CCeEEEeCCCCC-CCcC
Confidence            77899999999443     2233456788898888887778899999985 456766544   678999999997 6899


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcC---CCCcCCHHHHHHH
Q 005797          180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVR---PPGIYKNEYIEAL  255 (677)
Q Consensus       180 ~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~-s~~eAi~~~~~~R---p~~i~~~~~l~~L  255 (677)
                      .+.+..|++.+..++.  .+++++|+|||++|+||||+++|||||...++ ++++|++.|+.+|   ++++..+.|.+.|
T Consensus        85 ~~~i~~~~~~~~~~~~--~~~~~~v~VHC~~G~gRSg~~~~ayL~~~~~~~~~~~al~~~~~~R~~~~~~v~~psQ~ryl  162 (174)
T d1d5ra2          85 LELIKPFCEDLDQWLS--EDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYV  162 (174)
T ss_dssp             HHHHHHHHHHHHHHHT--TTSCSEEEEECSSSSHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHCSSSCSSCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc--cCCCCEEEEEeCCCcchhHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999999998876  55678999999999999999999999998775 9999999997777   5677888888888


Q ss_pred             HHHHh
Q 005797          256 YTFYH  260 (677)
Q Consensus       256 ~~~y~  260 (677)
                      .-+..
T Consensus       163 ~yf~~  167 (174)
T d1d5ra2         163 YYYSY  167 (174)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            64443


No 9  
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79  E-value=1.5e-19  Score=174.06  Aligned_cols=121  Identities=17%  Similarity=0.302  Sum_probs=97.8

Q ss_pred             CCeeEEEEcCCCCCCC----CcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcc-cCCceEEEEcCCCCC
Q 005797          139 RKLGLVIDLTNTTRYY----PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQK-HSKKYILVHCTHGHN  213 (677)
Q Consensus       139 ~~I~~VIdLt~~~~~y----~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~-~~~~~VlVHC~~G~~  213 (677)
                      .+|++|||++.+....    ....++..||+|+++|+.|... +   .+...+..+.+||.++. +.+++|||||.+|.|
T Consensus        47 ~gI~~Iin~~~~~~~~~~~~~~~~~~~~~i~y~~ipi~D~~~-~---~i~~~~~~~~~fi~~~~~~~~~~VLVHC~~G~s  122 (178)
T d1vhra_          47 LGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQE-F---NLSAYFERAADFIDQALAQKNGRVLVHCREGYS  122 (178)
T ss_dssp             HTCCEEEETTBSSSTTSBCCCHHHHTTTTCEEEECCCCCSTT-C---CGGGGHHHHHHHHHHHHTSTTCCEEEECSSSSS
T ss_pred             cCCEEEEEcCcccccccccccccccccCCcEEEEEecCCCcc-h---hHHHHHHHHHHHhhhhhhcCCceEEEEcCCCCc
Confidence            4799999999654432    2345677899999999998522 2   24445566777876543 345699999999999


Q ss_pred             hhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcCC
Q 005797          214 RTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL  264 (677)
Q Consensus       214 RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~  264 (677)
                      |||++++||||.+.||++++|+++++++|| +.++.+|+.||.+|++.+..
T Consensus       123 RS~~vv~aYLm~~~~~s~~~A~~~vr~~R~-i~pn~~f~~qL~~~e~~L~~  172 (178)
T d1vhra_         123 RSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLAK  172 (178)
T ss_dssp             HHHHHHHHHHHHHSCCCHHHHHHHHHHHSC-CCCCHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhcCCCHHHHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998 67999999999999877643


No 10 
>d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]}
Probab=99.79  E-value=1.5e-19  Score=167.46  Aligned_cols=100  Identities=26%  Similarity=0.425  Sum_probs=76.1

Q ss_pred             CCceEEEEEEEecC-----------C------------ceeEEEEeCCeee-eecCceeEecC-------CCCCCCCceE
Q 005797          550 RMNSVDFLFEVTDD-----------D------------RQLLYVFERGKKK-LMEGSSVEFTD-------REPSFYSGKI  598 (677)
Q Consensus       550 ~~nTVDF~l~~~~~-----------~------------~~~L~~~~~g~~~-~~~~~~~~f~~-------~~~~~~dg~I  598 (677)
                      +.|||||+|++...           +            ...|||+.+|... .++  .+.+.+       +....+||+|
T Consensus         1 EeNTIDF~lk~~~~~~~~~~~~~~~~~~~~~~y~~~p~~~~L~V~~~~~~~~~~~--~~~~~~e~~~~lk~~~~~~d~~I   78 (145)
T d1p16a1           1 EENTVDFQLEFVFNEVQDPDLDERDPTSTYLDYDAKPNLIKLRVWQGSNVHTDFA--KLDLSDDDWERLKALEQPLQGRI   78 (145)
T ss_dssp             GGCCEEEEEEEECEEEECTTSCTTSTTCEEEECSSCCSEEEEEEECSTTCEEEEE--EECCCHHHHHHHHHSSSCCTTCE
T ss_pred             CCCceeEEEEEecccccCCccccCCCccccCCCCCCCceEEEEEEeCCCcccccc--eeeeccchhHHHhhcCCcCCCcE
Confidence            37999999997510           0            1357887766432 222  122221       2235689999


Q ss_pred             EEEEEeCC-CCeeEEEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHH
Q 005797          599 IECTWDPD-VQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEI  651 (677)
Q Consensus       599 vEC~~d~~-~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~~~Vt~e~L~~~i~~i  651 (677)
                      |||.||.. .++|+++|+|+||++||+++||.+||+||.+|||+++|+..++.|
T Consensus        79 vEc~~d~~~~~~W~~~r~R~DK~~pN~~~t~~~v~~sI~~~it~~~l~~~~~~i  132 (145)
T d1p16a1          79 AECRQSTTKKGYWEMLRFRNDKSNGNHISVVEKILVSIKDGVKEKEVIEWCPKI  132 (145)
T ss_dssp             EEEEECSSSTTEEEEEEECTTCSSCCBHHHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred             EEEEecCCCCceEEEEEEcCCCCCccHHHHHHHHHHHHhCCCCHHHHHHHhHHH
Confidence            99999864 579999999999999999999999999999999999999888764


No 11 
>d1ckma1 b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA capping enzyme) {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=99.78  E-value=1.4e-19  Score=152.23  Aligned_cols=86  Identities=28%  Similarity=0.463  Sum_probs=70.9

Q ss_pred             CceEEEEEEEecCCceeEEEEeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEEecCCCCCChHHHHHH
Q 005797          551 MNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRK  630 (677)
Q Consensus       551 ~nTVDF~l~~~~~~~~~L~~~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEC~~d~~~~~W~~~R~R~DK~~pN~~~tv~~  630 (677)
                      .|||||+++- ..++..||+.+.|+..++..       ......+|+||||.|+  .++|+++|+|+||..||+++|+.+
T Consensus         2 hnTiDF~~~~-~~~t~~ly~~~~~~~v~~~~-------~~~~~~~g~IvEc~y~--~~~W~~~R~R~DK~~pN~~~T~~~   71 (89)
T d1ckma1           2 HHTIDFIIMS-EDGTIGIFDPNLRKNVPVGK-------LDGYYNKGSIVECGFA--DGTWKYIQGRSDKNQANDRLTYEK   71 (89)
T ss_dssp             CCCEEEEECS-TTCCEEEEETTTTEEEECCC-------CSSCCCTTCEEEEEEE--TTEEEEEEECTTCSSCCBHHHHHH
T ss_pred             CccEEEEEEc-CCCcEEEEchhccccCCcch-------hcceEcCCCEEEEEEc--CCcceEEEEcCCCCCCccHhHHHH
Confidence            6999998854 34567899887776544332       1223479999999998  478999999999999999999999


Q ss_pred             HHHhcccCCCHHHHHH
Q 005797          631 VMRSIRDNITEEVLLN  646 (677)
Q Consensus       631 v~~SI~~~Vt~e~L~~  646 (677)
                      ||+||+++||.|+|++
T Consensus        72 vl~sI~e~It~eel~~   87 (89)
T d1ckma1          72 TLLNIEENITIDELLD   87 (89)
T ss_dssp             HHHHHHHCCCHHHHTT
T ss_pred             HHHHHHcCCCHHHHHh
Confidence            9999999999999975


No 12 
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=6.8e-19  Score=169.10  Aligned_cols=125  Identities=18%  Similarity=0.189  Sum_probs=103.1

Q ss_pred             HHHHHHcCCCeeEEEEcCCCCC------CCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceE
Q 005797          131 IHQLRVLGRKLGLVIDLTNTTR------YYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (677)
Q Consensus       131 ~~~~~~~~~~I~~VIdLt~~~~------~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~V  204 (677)
                      ++.+++  .+|+.|+||+....      .+..+.++..||+|+++|+.|+ .+|+.+.+.++++.+.+.+.    .+++|
T Consensus        40 l~~L~~--~gi~~Vv~L~~~~E~~~~~~~~~~~~~~~~gi~~~~~p~~D~-~~p~~~~~~~~~~~i~~~l~----~~~~V  112 (176)
T d1fpza_          40 TEELKS--CGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG-GTPDIASCCEIMEELTTCLK----NYRKT  112 (176)
T ss_dssp             HHHHHH--HTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHHHHHHHHHH----TTCCE
T ss_pred             HHHHHh--CCCCEEEEeCChhhhhhcCCCcHHHHHHHcCCEEEeCCccCC-CchhhHHHHHHHHHHHHHHH----cCCeE
Confidence            445554  46999999986431      2234567889999999999997 68998888888877766664    57889


Q ss_pred             EEEcCCCCChhHHHHHHHHHHh-cCCCHHHHHHHHHhcC-CCCcCCHHHHHHHHHHHhhc
Q 005797          205 LVHCTHGHNRTGYMIVHFLMRS-QSMSVAQAIKKFAEVR-PPGIYKNEYIEALYTFYHEK  262 (677)
Q Consensus       205 lVHC~~G~~RTG~li~aYLm~~-~~~s~~eAi~~~~~~R-p~~i~~~~~l~~L~~~y~~~  262 (677)
                      +|||++|.||||+++|||||+. .++++++|++.+++.| |.+++++.|.+.|++|...+
T Consensus       113 ~VHC~~G~gRtg~v~~~~Li~~~~~~~~~~Ai~~vr~~R~~~~i~t~~Q~~~l~~f~~~l  172 (176)
T d1fpza_         113 LIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHEFRDKL  172 (176)
T ss_dssp             EEECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCTTSSCSHHHHHHHTTHHHHH
T ss_pred             EEEecCCCCchHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999985 5899999999999998 56788999999998887764


No 13 
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]}
Probab=99.76  E-value=4.6e-20  Score=171.75  Aligned_cols=116  Identities=16%  Similarity=0.224  Sum_probs=96.9

Q ss_pred             CCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHH
Q 005797          139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM  218 (677)
Q Consensus       139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l  218 (677)
                      .+|++|||++.+...+     ...++.|+++|+.|....+    +..+++.+.+||+++...+++|||||.+|.|||+++
T Consensus        28 ~gI~~Iin~~~~~~~~-----~~~~~~y~~i~i~D~~~~~----i~~~~~~~~~~i~~~~~~~~~VlVHC~~G~sRS~~v   98 (145)
T d1m3ga_          28 CGITAVLNVSASCPNH-----FEGLFRYKSIPVEDNQMVE----ISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATI   98 (145)
T ss_dssp             HTCSEEEECSSSSSEE-----ECSSSEEEECCCCCSTTCC----CTTSHHHHHHHHHHHHHTTCCEEECCSSSSSHHHHH
T ss_pred             cCCcEEEEecCCCCcC-----CCCceEEEEEeccCCchhh----HHHHHHHHHHHHHHhhccCceEEEEcccccccHHHH
Confidence            4799999998654322     2357899999999863322    344566677788777778999999999999999999


Q ss_pred             HHHHHHHhcCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhhcC
Q 005797          219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR  263 (677)
Q Consensus       219 i~aYLm~~~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~  263 (677)
                      ++||||.+.+|++++|+++++++||.+.+|.+|+.||.+|..++.
T Consensus        99 ~~aYLm~~~~~~~~~A~~~v~~~Rp~v~pn~~f~~qL~~~e~~l~  143 (145)
T d1m3ga_          99 CLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFETQVL  143 (145)
T ss_dssp             HHHHHHHTTCCHHHHHHHHHSCSCCCCSSCSSCCCCSHHHHHHHT
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999887653


No 14 
>d1a0ia2 d.142.2.1 (A:2-240) ATP-dependent DNA ligase, N-terminal domain {Bacteriophage T7 [TaxId: 10760]}
Probab=99.68  E-value=2.3e-17  Score=165.01  Aligned_cols=180  Identities=16%  Similarity=0.127  Sum_probs=116.5

Q ss_pred             cccccchhchhh-hcc-CCeEEEEcccceEEEEEEECCEE-EEEeCCCccc-c---ccCcCCCcCC-CCcccccCCCCee
Q 005797          349 HPVSLNSDNLQL-LRQ-RYYYATWKADGTRYMMLITIDGC-YLIDRCFNFR-R---VQMRFPCRNS-NEGLGEKTHHFTL  420 (677)
Q Consensus       349 qPVsl~r~nl~~-l~~-~~Y~V~eK~DG~R~ll~i~~~~v-yLidR~~~~~-~---v~~~FP~~~~-~~~~~~~~~~~tl  420 (677)
                      .||+++...+.. +.. ..+++++|+||+|+++++.++++ .+++|++.-+ .   ++..+|.... .........++++
T Consensus         9 ~~~~~~e~~~~~~~~~~~~~~~E~K~DG~R~~~~~~~~~~~~~~SR~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v   88 (239)
T d1a0ia2           9 KAVSFVESAIKKALDNAGYLIAEIKYDGVRGNICVDNTANSYWLSRVSKTIPALEHLNGFDVRWKRLLNDDRCFYKDGFM   88 (239)
T ss_dssp             EEEECCHHHHHHHHHHHSSEEEEECCCSEEEEEEEETTSEEEEECTTSCBCGGGGGGCEECHHHHHHHHSTTCCCTTEEE
T ss_pred             cCcCccHhHHHHhhccCCCEEEEEeeceEEEEEEEECCeEEEEEecCCCcccchhhhhhhhhhHHHHHHHHhhcCCcceE
Confidence            388888777753 333 34677889999999999998765 4568887522 1   1111111100 0001011246799


Q ss_pred             eeEEEEEecCCCC-------------------------------------CCceeEEEEeEEeecCC------ccccCCC
Q 005797          421 LDGEMIIDKLPDS-------------------------------------RRQERRYLIYDMMAINQ------ASVIERP  457 (677)
Q Consensus       421 LDGElV~d~~~~~-------------------------------------~~~~~~yliFDiL~~~G------~~l~~~p  457 (677)
                      ||||||....+..                                     ....+.|++||++.+++      ..+...+
T Consensus        89 LDGEl~~~~~~f~~~~~~v~~~~~~~~~~~~~f~~l~~r~~~~~~~~~~~~~~~l~~~vfD~l~l~~~~~~~~~~~~~~~  168 (239)
T d1a0ia2          89 LDGELMVKGVDFNTGSGLLRTKWTDTKNQEFHEELFVEPIRKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDCDVMTLL  168 (239)
T ss_dssp             EEEEEEESSSCTTTHHHHHHCCSCCSSBSSCC--------CCCSCCCCCBCTTTEEEEEEEEEEHHHHHHCCCEEEEHHH
T ss_pred             EeeeEeeccCCcccchhhhhhcccccccccCCHHHHHhhhccCccchhhhhcccceEEEEEEeeccccccccchhhcccc
Confidence            9999997421100                                     01246899999999864      3467788


Q ss_pred             HHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHHHHHhcccccCCCceEEEEeCCCCCcc
Q 005797          458 FYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVP  537 (677)
Q Consensus       458 f~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~  537 (677)
                      +.+|+..|...+..-.                   .+..+...+.+.+++.+.+.+-+...+..+.||||.+..++||.+
T Consensus       169 ~~~r~~~l~~~~~~~~-------------------~~~~~~~~~~~~~~~~~el~~~~~~~~~~g~EGlmiK~~~s~Y~~  229 (239)
T d1a0ia2         169 MQEHVKNMLPLLQEYF-------------------PEIEWQAAESYEVYDMVELQQLYEQKRAEGHEGLIVKDPMCIYKR  229 (239)
T ss_dssp             HHHHHHHHHHHHHHHC-------------------TTSEEEECCEEEESSHHHHHHHHHHHHTTTCCCEEEECTTCEECS
T ss_pred             HHHHHHHHHHHHhhcC-------------------CCccEEEeeeEecCCHHHHHHHHHHHHHCCCcEEEEeCCCCccCC
Confidence            9999988877553110                   011255556666665555444444567899999999999999999


Q ss_pred             CCCCCeEEEc
Q 005797          538 RTHEGLLKWK  547 (677)
Q Consensus       538 G~~~~lLKWK  547 (677)
                      |+...|+|||
T Consensus       230 GR~~~w~K~K  239 (239)
T d1a0ia2         230 GKKSGWWKMK  239 (239)
T ss_dssp             EEEEEEEEES
T ss_pred             CCCCCcEEeC
Confidence            9988899998


No 15 
>d1fvia2 d.142.2.1 (A:2-189) ATP-dependent DNA ligase, N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=99.48  E-value=3.3e-14  Score=136.90  Aligned_cols=153  Identities=17%  Similarity=0.106  Sum_probs=97.5

Q ss_pred             CCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcCCCCcccccCCCCeeeeEEEEEecCC------------
Q 005797          364 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLP------------  431 (677)
Q Consensus       364 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~------------  431 (677)
                      .++++++|+||+|++..     +-+++|++..+  +-.||.....      .....+|||||+....+            
T Consensus        19 ~p~~~e~K~DG~R~~~~-----~~l~SR~g~~~--~~~~~~~~~~------~~~~~~lDGEl~~~~~~~~~~~~~~~~~~   85 (188)
T d1fvia2          19 FPCLATPKIAGIRSVKQ-----TQMLSRTFKPI--RNSVMNRLLT------ELLPEGSDGEISIEGATFQDTTSAVMTGH   85 (188)
T ss_dssp             SSEEEEECCCSEEEEES-----SSEECTTSCBC--SCHHHHHHHH------HHSCTTEEEEEECTTSCHHHHHHHHHSCC
T ss_pred             CcEEEEeccccEeEEeE-----EEEEecCCCcc--CCcChHHHHh------hCccccccceeeccCCchhhhHHHHhhcc
Confidence            47899999999999642     23889998732  3334432111      12456799999975432            


Q ss_pred             CCCCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCCCCccCCCCCcEEEecceEEchhHHHH
Q 005797          432 DSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKL  511 (677)
Q Consensus       432 ~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p~~~~~~~pf~i~~K~~~~~~~~~~l  511 (677)
                      ......+.|.+||++..++    ..||.+|+..|++.+..-. ...             ......+.....+...+.+.+
T Consensus        86 ~~~~~~~~~~vfD~~~~~~----~~~~~~r~~~l~~~l~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~  147 (188)
T d1fvia2          86 KMYNAKFSYYWFDYVTDDP----LKKYIDRVEDMKNYITVHP-HIL-------------EHAQVKIIPLIPVEINNITEL  147 (188)
T ss_dssp             ----CCEEEEEEEECSSCT----TSCHHHHHHHHHHHHHHCG-GGG-------------GCSSEEEEECCCEEECSHHHH
T ss_pred             cccccccEEEEEEEecCcc----cccHHHHHHHHHHHHHhcc-ccc-------------ccCceEEEeeeeEecCCHHHH
Confidence            0111347899999998664    6899999999988653211 100             011112222333444444444


Q ss_pred             HHHhcccccCCCceEEEEeCCCCCccCCCC----CeEEEc
Q 005797          512 LKEFIPKLSHDADGLVFQGWDDPYVPRTHE----GLLKWK  547 (677)
Q Consensus       512 l~~~~~~l~h~~DGLIf~p~~spY~~G~~~----~lLKWK  547 (677)
                      .+.+...+..+.||||++..+++|.+|++.    .|||+|
T Consensus       148 ~~~~~~~~~~G~EGlmiK~~ds~Y~~gr~s~r~~~~lK~K  187 (188)
T d1fvia2         148 LQYERDVLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMK  187 (188)
T ss_dssp             HHHHHHHHHTTCCSEEEECTTCCCCSSBCCTTTTSSEEEC
T ss_pred             HHHHHHHHHCCCcEEEEECCCCccCCCCcCCCCCceEEEe
Confidence            443445677899999999999999999753    599998


No 16 
>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.35  E-value=3.4e-13  Score=125.36  Aligned_cols=111  Identities=17%  Similarity=0.225  Sum_probs=78.8

Q ss_pred             CHHHHHHHHHHcCCCeeEEEEcCCCCCCC-CcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceE
Q 005797          126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYY-PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (677)
Q Consensus       126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y-~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~V  204 (677)
                      ++.++ +.++.  .+|++||||+.+...- .++.+...||+|+++|+.+. ..|......+.+..+.+.+.  ...+++|
T Consensus        22 t~~~~-~~L~~--lgIktIidLr~~~e~~~~~~~~~~~gi~~~~ip~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~pv   95 (151)
T d1xria_          22 DSANF-SFLQT--LGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGN-KEPFVNIPDHKIRMALKVLL--DEKNHPV   95 (151)
T ss_dssp             CHHHH-HHHHH--HTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCC-CGGGCCCCHHHHHHHHHHHH--CGGGCSE
T ss_pred             CHHHH-HHHHH--CCCCEEEECCCcchhhcccchhhhcCceEeecCcccc-ccccccccHHHHHHHHHHHh--cCCCCCE
Confidence            45554 44544  5799999998653321 34556788999999999875 33333222333333444443  3456899


Q ss_pred             EEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCC
Q 005797          205 LVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRP  243 (677)
Q Consensus       205 lVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~Rp  243 (677)
                      +|||++|++|||+++|+||+. .||+.++|++.+.....
T Consensus        96 lvHC~~GkdRTG~v~a~~l~~-~g~~~~~i~~dy~~~~~  133 (151)
T d1xria_          96 LIHCKRGKHRTGCLVGCLRKL-QKWCLTSIFDEYQRFAA  133 (151)
T ss_dssp             EEECSSSSSHHHHHHHHHHHH-TTBCHHHHHHHHHHHHG
T ss_pred             EEEcCCCchHHHHHHHHHHHH-cCCCHHHHHHHHHHhcc
Confidence            999999999999999999975 89999999998887653


No 17 
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]}
Probab=98.90  E-value=2.5e-09  Score=109.95  Aligned_cols=80  Identities=18%  Similarity=0.282  Sum_probs=66.0

Q ss_pred             hhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh-cCCCHHHHHH
Q 005797          158 DLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-QSMSVAQAIK  236 (677)
Q Consensus       158 ~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-~~~s~~eAi~  236 (677)
                      .++..|+.|+++|+.|+ .+|+.+++..|++.+    .+ ...+..|+|||++|.||||+++++|+|.. .+.++++|++
T Consensus       175 ~~e~~g~~Y~ripi~D~-~~P~~~~id~~i~~i----~~-~~~~~~ivvhc~~g~~rt~~~~~~~~~~~~~~~~~~d~i~  248 (313)
T d2pt0a1         175 VAEAAGMRYFRIAATDH-VWPTPENIDRFLAFY----RT-LPQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDILY  248 (313)
T ss_dssp             HHHHTTCEEEEEEECTT-SCCCHHHHHHHHHHH----HT-CCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred             HHHhhCceEEEecCCCC-CCCCHHHHHHHHHHH----Hh-CCCCCCEEEECCCCCcHHHHHHHHHHHHHccCCCHHHHHH
Confidence            34779999999999998 689999988887644    43 24578999999999999999999998875 4679999998


Q ss_pred             HHHhcCC
Q 005797          237 KFAEVRP  243 (677)
Q Consensus       237 ~~~~~Rp  243 (677)
                      .-...++
T Consensus       249 rq~~l~~  255 (313)
T d2pt0a1         249 RQHEIGG  255 (313)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhcc
Confidence            7666554


No 18 
>d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.58  E-value=2.4e-07  Score=91.97  Aligned_cols=142  Identities=18%  Similarity=0.321  Sum_probs=95.0

Q ss_pred             CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc---hhhh---------
Q 005797          102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS---DLKK---------  161 (677)
Q Consensus       102 ~~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~---~~~~---------  161 (677)
                      ..||+...|+..+..+.        +.++.+      .++..||-|+...        .|+..+   .+..         
T Consensus        54 ~~fI~tQ~P~~~T~~dF--------W~mV~~------~~v~~IVmL~~~~e~~~~~~~~y~p~~~~~~~~~~~v~~~~~~  119 (249)
T d1lara2          54 KAYIATQGPLAESTEDF--------WRMLWE------HNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEY  119 (249)
T ss_dssp             TCEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEESSCCCSCSSSCEEETTEEEEEEEEE
T ss_pred             CeEEEECCCCccchhhh--------eeeEEe------ccCCeeEeccccccCCeecccccCccCCCceeeeEEEEEEEEE
Confidence            46899999988766554        344443      5788999987431        122111   1100         


Q ss_pred             --------------------CCcEEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHH
Q 005797          162 --------------------EGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV  220 (677)
Q Consensus       162 --------------------~gI~y~~ip-~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~  220 (677)
                                          .-|.++++. .++++.+++...+..|+..+.+.... ....++|+|||.+|.||||++++
T Consensus       120 ~~~~~~~~~l~~~~~~~~~~~~v~h~~y~~Wpd~~~P~~~~~~~~li~~v~~~~~~-~~~~~pivVhc~~G~gRsg~f~~  198 (249)
T d1lara2         120 NMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQ-FGQDGPITVHCSAGVGRTGVFIT  198 (249)
T ss_dssp             ECSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSCCSSCHHHHHHHHHHHHHHHH-TTCCSCEEEESSSSSSHHHHHHH
T ss_pred             ecCCeEEEEEEEEEcCCCceEEEEEEeecCCCcCCCCCCHHHHHHHHHHHHHhhhh-cCCCCcEEEECCCCCeeehHHHH
Confidence                                113333333 44554344567888888887665432 34568999999999999999997


Q ss_pred             HHHHH----hcC-CCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005797          221 HFLMR----SQS-MSVAQAIKKFAEVRPPGIYKNEYIEALYTF  258 (677)
Q Consensus       221 aYLm~----~~~-~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~  258 (677)
                      +..+-    ..+ .++.+++..+|+.|+..+.+..|...++..
T Consensus       199 ~~~~~~~l~~~~~vdv~~~v~~lR~qR~~~v~~~~Qy~f~y~~  241 (249)
T d1lara2         199 LSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRA  241 (249)
T ss_dssp             HHHHHHHHHHHSEECHHHHHHHHTTTSTTSSCSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCHHHHHHHHHhhcccccCCHHHHHHHHHH
Confidence            66432    223 489999999999999999999888877654


No 19 
>d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]}
Probab=98.57  E-value=1.3e-07  Score=93.73  Aligned_cols=90  Identities=16%  Similarity=0.265  Sum_probs=66.8

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhc-----ccCCceEEEEcCCCCChhHHHHHHHHHHhcC-CCHHHHHHHHHhcCCC
Q 005797          171 CKGRDAVPDNASVNNFVYEVTQFLSRQ-----KHSKKYILVHCTHGHNRTGYMIVHFLMRSQS-MSVAQAIKKFAEVRPP  244 (677)
Q Consensus       171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~-----~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~-~s~~eAi~~~~~~Rp~  244 (677)
                      .+|++.+++.+.+..+++.+...-...     ....++|+|||.+|.||||+++|+..+...+ .++.+++..+|+.|++
T Consensus       143 Wpd~~vP~~~~~l~~li~~v~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtf~a~~~l~~~~~vdv~~iv~~lR~qR~~  222 (243)
T d1g4us2         143 WPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRADFRDSRNN  222 (243)
T ss_dssp             CCTTSCCSCHHHHHHHHHHHHC-------------CCCEEEECSSSSSHHHHHHHHHHHHHCTTCCHHHHHHHHHTTSCT
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhhhhcccCCCCCCEEEEECCCCCcchHHHHHHHHHhcCCCCHHHHHHHHHhcCCC
Confidence            466654556777787777665542211     1235689999999999999999998887665 6999999999999987


Q ss_pred             -CcCCHHHHHHHHHHHh
Q 005797          245 -GIYKNEYIEALYTFYH  260 (677)
Q Consensus       245 -~i~~~~~l~~L~~~y~  260 (677)
                       .+.+..|...|+..-.
T Consensus       223 ~mVqt~~QY~flY~~v~  239 (243)
T d1g4us2         223 RMLEDASQFVQLKAMQA  239 (243)
T ss_dssp             TTTCCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHH
Confidence             5889998888876543


No 20 
>d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.49  E-value=2e-07  Score=92.41  Aligned_cols=88  Identities=23%  Similarity=0.255  Sum_probs=64.4

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCC
Q 005797          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPG  245 (677)
Q Consensus       171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~~~s~~eAi~~~~~~Rp~~  245 (677)
                      .++++.+++...+..|+..+...-  ....+++|+|||.+|.||||++++...+..     ...++.+++..+|+.|++.
T Consensus       148 Wpd~~~P~~~~~~l~~~~~v~~~~--~~~~~~PivVHCs~G~gRsg~f~a~~~~~~~l~~~~~vdv~~~v~~lR~qR~~~  225 (245)
T d1p15a_         148 WPEVGIPSDGKGMINIIAAVQKQQ--QQSGNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQRPHM  225 (245)
T ss_dssp             SCSSSCCSSSCSHHHHHHHHHHHT--TTTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHTTSTTS
T ss_pred             CCccCCCCCHHHHHHHHHHHHhhh--ccCCCCCEEEEcCCCCccccHHHHHHHHHHHHHcCCCcCHHHHHHHHHHhcccc
Confidence            455543335566777776665431  234557999999999999999998765432     2368999999999999999


Q ss_pred             cCCHHHHHHHHHHHh
Q 005797          246 IYKNEYIEALYTFYH  260 (677)
Q Consensus       246 i~~~~~l~~L~~~y~  260 (677)
                      +.+..|...++..-.
T Consensus       226 vqt~~QY~f~y~~l~  240 (245)
T d1p15a_         226 VQTLEQYEFCYKVVQ  240 (245)
T ss_dssp             SCSTTTTHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH
Confidence            999888777765543


No 21 
>d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]}
Probab=98.47  E-value=5.2e-07  Score=92.03  Aligned_cols=141  Identities=15%  Similarity=0.198  Sum_probs=94.2

Q ss_pred             ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC------CCCCcch---hh-------------
Q 005797          103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT------RYYPTSD---LK-------------  160 (677)
Q Consensus       103 ~fip~k~Pl~~~~~~~i~~~~r~~~~~l~~~~~~~~~~I~~VIdLt~~~------~~y~~~~---~~-------------  160 (677)
                      .||+.-.|+..+..+.        +.|+.+      .++..||-||...      ..|-++.   +.             
T Consensus       102 ~yIatQ~Pl~~Ti~dF--------W~MVwe------~~~~~IVmLt~~~E~~~~c~~ywp~~~~~~g~~~V~~~~~~~~~  167 (297)
T d1jlna_         102 AFIATQGPMINTVNDF--------WQMVWQ------EDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVTGVTECD  167 (297)
T ss_dssp             SEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSBSSSBCCCCCSCSSEEEETTEEEEEEEEEECS
T ss_pred             eEEEECCCChhhHHHH--------HHHHHh------cCCceEEEeeceecCCcccccccccCCcccceEEEEEEEEEEcC
Confidence            4888888987766554        344443      5799999998532      1121111   00             


Q ss_pred             --------------hCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH
Q 005797          161 --------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR  225 (677)
Q Consensus       161 --------------~~gI~y~~i-p~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~  225 (677)
                                    ..-|.++++ ..+|++.+++...+..|+..+.+.... ....++|+|||.+|.||||++||...+.
T Consensus       168 ~~~~r~~~~~~~~~~r~V~h~~~~~Wpd~~vP~~~~~~l~~i~~v~~~~~~-~~~~~PivVHCsaGvGRtG~fial~~~l  246 (297)
T d1jlna_         168 NYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLA-SEGRGPVVVHCSAGIGRTGCFIATSIGC  246 (297)
T ss_dssp             SEEEEEEEEEETTEEEEEEEEEECCSCTTSSCSCSHHHHHHHHHHHHHHHT-CTTSCCEEEESSSSSHHHHHHHHHHHHH
T ss_pred             CEEEEeeccccCCcceEEEEEEECCcCCCCCCCChHHHHHHHHHHHHHHhc-ccCCCceEEEecccccchhHHHHHHHHH
Confidence                          011222322 345665445677888888777654321 2345799999999999999999876653


Q ss_pred             h-----cCCCHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 005797          226 S-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF  258 (677)
Q Consensus       226 ~-----~~~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~  258 (677)
                      .     ...++-+++..+|+.|+..+.+..|...+++.
T Consensus       247 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~~  284 (297)
T d1jlna_         247 QQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHHA  284 (297)
T ss_dssp             HHHHHHSEECHHHHHHHHHHHSTTSSCSHHHHHHHHHH
T ss_pred             HHHhhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHHH
Confidence            2     23589999999999999999999888776543


No 22 
>d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]}
Probab=98.47  E-value=3.8e-07  Score=92.08  Aligned_cols=85  Identities=19%  Similarity=0.276  Sum_probs=63.8

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh----cC-CCHHHHHHHHHhcCCCC
Q 005797          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS----QS-MSVAQAIKKFAEVRPPG  245 (677)
Q Consensus       171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~----~~-~s~~eAi~~~~~~Rp~~  245 (677)
                      .+|++.+++...+..|+..+..   ......++|+|||.+|.||||+++|+..+..    .+ .++.+++..+|+.|+..
T Consensus       183 Wpd~~~P~~~~~~l~~i~~v~~---~~~~~~~PivVHCs~G~gRsG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~  259 (278)
T d1rpma_         183 WPDHGVPYHATGLLGFVRQVKS---KSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNM  259 (278)
T ss_dssp             SCSSSCCSCSHHHHHHHHHHHH---HSCTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHHSTTS
T ss_pred             cccCCCCCCHHHHHHHHHHHHH---HhCCCCCCEEEEeCCCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccc
Confidence            3455333356777777766643   2234467999999999999999997665432    23 58999999999999999


Q ss_pred             cCCHHHHHHHHHH
Q 005797          246 IYKNEYIEALYTF  258 (677)
Q Consensus       246 i~~~~~l~~L~~~  258 (677)
                      +.+..|...++..
T Consensus       260 V~t~~QY~f~y~~  272 (278)
T d1rpma_         260 VQTEEQYVFIHDA  272 (278)
T ss_dssp             SCSHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH
Confidence            9999988887754


No 23 
>d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.46  E-value=5.9e-07  Score=92.45  Aligned_cols=84  Identities=15%  Similarity=0.180  Sum_probs=63.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCCCc
Q 005797          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPPGI  246 (677)
Q Consensus       172 ~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~-----~~~~s~~eAi~~~~~~Rp~~i  246 (677)
                      +|++.+++...+..|+..+...   .....++|+|||.+|.||||+++|...+-     ....++.+++..+|+.|+..+
T Consensus       183 pd~~~P~~~~~~l~~i~~v~~~---~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V  259 (317)
T d1lara1         183 PDHGVPEYPTPILAFLRRVKAC---NPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMV  259 (317)
T ss_dssp             CSSSCCSCSHHHHHHHHHHHHH---SCTTCCCEEEESSSSSSHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHTTSTTSS
T ss_pred             ccCCCCCCHHHHHHHHHHHHHh---hcCCCCcEEEEecccccceeeeehhHhHHHHHhcCCCCCHHHHHHHHHhhccccc
Confidence            4554444567777777766432   23446799999999999999999865432     224699999999999999999


Q ss_pred             CCHHHHHHHHHH
Q 005797          247 YKNEYIEALYTF  258 (677)
Q Consensus       247 ~~~~~l~~L~~~  258 (677)
                      .+..|...++..
T Consensus       260 ~t~~QY~fiy~~  271 (317)
T d1lara1         260 QTEDQYVFIHEA  271 (317)
T ss_dssp             CSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            999988777654


No 24 
>d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40  E-value=5.4e-07  Score=92.37  Aligned_cols=83  Identities=14%  Similarity=0.264  Sum_probs=63.8

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh----c-CCCHHHHHHHHHhcCCCC
Q 005797          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS----Q-SMSVAQAIKKFAEVRPPG  245 (677)
Q Consensus       171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~----~-~~s~~eAi~~~~~~Rp~~  245 (677)
                      .+|++.+++...+..|+..+...     ...++|+|||.+|.||||++||+..+..    . ..++.+++..+|+.|+..
T Consensus       207 Wpd~~vP~~~~~~l~~l~~v~~~-----~~~~PivVHCsaGvGRtG~fia~d~~l~~l~~~~~vdv~~~v~~lR~qR~~~  281 (308)
T d1wcha_         207 WPDHDTPSQPDDLLTFISYMRHI-----HRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHGM  281 (308)
T ss_dssp             CCTTSCCSCHHHHHHHHHHHHHH-----CCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSTTC
T ss_pred             ccccccCCCchhHHHHHHHHHHh-----ccCCcEEEEeccccchhHHHHHHHHHHHHHHccCCCCHHHHHHHHHhhCccc
Confidence            35664444667777777766442     3567999999999999999998766542    2 368999999999999999


Q ss_pred             cCCHHHHHHHHHH
Q 005797          246 IYKNEYIEALYTF  258 (677)
Q Consensus       246 i~~~~~l~~L~~~  258 (677)
                      +.+..|...++..
T Consensus       282 Vqt~~QY~f~y~~  294 (308)
T d1wcha_         282 VQTEDQYIFCYQV  294 (308)
T ss_dssp             SCSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            9999888776643


No 25 
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]}
Probab=98.34  E-value=9.5e-07  Score=90.46  Aligned_cols=87  Identities=22%  Similarity=0.326  Sum_probs=67.4

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHH----HHhcC----CCHHHHHHHHHhcC
Q 005797          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFL----MRSQS----MSVAQAIKKFAEVR  242 (677)
Q Consensus       171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYL----m~~~~----~s~~eAi~~~~~~R  242 (677)
                      .+|++.+++...+..|+..+...... ....++|+|||.+|.||||++||...    +...+    .++.+++..+|+.|
T Consensus       205 Wpd~~vP~~~~~ll~li~~v~~~~~~-~~~~~PivVHCs~GvgRtGtfia~~~~l~~l~~~~~~~~vdv~~~V~~lR~qR  283 (307)
T d2shpa1         205 WPDHGVPSDPGGVLDFLEEVHHKQES-IMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQR  283 (307)
T ss_dssp             CCSSSCCSCHHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSEECHHHHHHHHHTTS
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHhhc-ccCCCCEEEEeCCCCcHHHHHHHHHHHHHHHHHcCCCCccCHHHHHHHHHhhc
Confidence            45665555778888888888776543 23457999999999999999988653    23334    58999999999999


Q ss_pred             CCCcCCHHHHHHHHHH
Q 005797          243 PPGIYKNEYIEALYTF  258 (677)
Q Consensus       243 p~~i~~~~~l~~L~~~  258 (677)
                      +..+.+..|...+++.
T Consensus       284 ~~~Vqt~~QY~fiy~~  299 (307)
T d2shpa1         284 SGMVQTEAQYRSIYMA  299 (307)
T ss_dssp             TTSSCCHHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHHH
Confidence            9999999888777653


No 26 
>d1s68a_ d.142.2.4 (A:) RNA ligase 2, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=98.30  E-value=9.7e-07  Score=86.52  Aligned_cols=184  Identities=11%  Similarity=0.082  Sum_probs=99.2

Q ss_pred             hhccCCeEEEEcccceEEEEEEECCEEEEEeCCCccccccCcCCCcC---CC----CcccccCCCCeeeeEEEEEecCCC
Q 005797          360 LLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRN---SN----EGLGEKTHHFTLLDGEMIIDKLPD  432 (677)
Q Consensus       360 ~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~---~~----~~~~~~~~~~tlLDGElV~d~~~~  432 (677)
                      .+....|+|+||.||+|+.++..++.+.+.+|++.+..-+-.|....   ..    ..+........++||||.....+.
T Consensus        24 ~~~~~~~vveEKlDG~n~~l~~~~~~~~~~SR~~~l~~~~~~~g~~~~~~~l~~~i~~~~~~~~~~~~~~~~i~GE~~g~  103 (233)
T d1s68a_          24 GLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGP  103 (233)
T ss_dssp             TCSCSCEEEEECCCSEEEEEEEESSCEEEEETTEECCTTCCCTTTHHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEEST
T ss_pred             ccCCCeEEEEEeECCccEEEEEECCEEEEEecCCcccCCCccchhhhhhhHHHHHHHHHHhhhhhccCcceEEEeecccC
Confidence            35567999999999999999999999999999974221111111000   00    000001123357889888642211


Q ss_pred             -----CCCceeEEEEeEEeec-CCccccCCCHHHHHHHHHHHhcCccchh-ccccccc-CCCCccCCCCCcEEEecceEE
Q 005797          433 -----SRRQERRYLIYDMMAI-NQASVIERPFYERWKMLEKEVIEPRNYE-RHNIYQS-RNPYYRYDLEPFRVRRKDFWL  504 (677)
Q Consensus       433 -----~~~~~~~yliFDiL~~-~G~~l~~~pf~eR~~~L~~~i~~pr~~~-~~~i~~~-~~p~~~~~~~pf~i~~K~~~~  504 (677)
                           .......|++||+... ++....-+++..+..+++..-+..-... +-.+.+. ..|.      .+.-....+..
T Consensus       104 ~iq~~~~~~~~~f~~Fdv~~~~~~~~~~fl~~d~~~~~~~~~gl~~vP~l~rg~~~~~~~~~~------~~~~~~~~~~~  177 (233)
T d1s68a_         104 GIQKNVDYCDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFKFKMAPLLGRGKFEELIKLPN------DLDSVVQDYNF  177 (233)
T ss_dssp             TTSSSCCCCSCEEEEEEEEEEETTCCEEECCHHHHHHHHHHHTCEESCEEEEECHHHHTTSCT------TCBCCHHHHHH
T ss_pred             CccccccccccceEEEEEEEeccCCccceecHHHHHHHHhcCCCCcCCeEEEecHHHhhcccc------ccchhhhhhcc
Confidence                 1113458999999876 4555667889999888877432211000 0000000 0000      00000000000


Q ss_pred             chhHHHH--HHHh-----cccccCCCceEEEEeCCCCCccCCCCCeEEEccC
Q 005797          505 LSTVNKL--LKEF-----IPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYA  549 (677)
Q Consensus       505 ~~~~~~l--l~~~-----~~~l~h~~DGLIf~p~~spY~~G~~~~lLKWKp~  549 (677)
                      ......+  +..+     .....+..||||++|.+++|.+.+...|+|-|-+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~EGiVlK~~~~~~~~~~~r~~~K~k~~  229 (233)
T d1s68a_         178 TVDHAGLVDANKCVWNAEAKGEVFTAEGYVLKPCYPSWLRNGNRVAIKCKNS  229 (233)
T ss_dssp             HHHHHCHHHHHHCCCCCCCCCSSCBCCEEEEEESSCCBCTTSCBSCEEEECG
T ss_pred             cccccchhhhhcccchhhcccccCccCEEEEEeCCCCEecCCCceEEEEecc
Confidence            0000100  1111     1123456799999999999999888899999843


No 27 
>d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]}
Probab=98.25  E-value=1.5e-06  Score=87.38  Aligned_cols=87  Identities=17%  Similarity=0.189  Sum_probs=63.6

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhc-----CCCHHHHHHHHHhcCCCC
Q 005797          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-----SMSVAQAIKKFAEVRPPG  245 (677)
Q Consensus       171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~-----~~s~~eAi~~~~~~Rp~~  245 (677)
                      .+|++.+++...+..|+..+..... .....++|+|||.+|.||||+++|+..+..+     ..++.+++..+|+.|+..
T Consensus       176 Wpd~~~P~~~~~~~~l~~~v~~~~~-~~~~~~PivVHCs~GvgRtGtf~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~  254 (273)
T d1l8ka_         176 WPDFGVPESPASFLNFLFKVRESGS-LNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGL  254 (273)
T ss_dssp             CCSSSCCSCSHHHHHHHHHHHHTTT-TSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHHTTTBTTC
T ss_pred             cccCCCCCCHHHHHHHHHHHHHhhc-cCCCCceEEEEecccccceehHHHHHHHHHHHHhCCCcCHHHHHHHHHHhcccc
Confidence            3556444456666666665544221 1223469999999999999999987665422     358999999999999999


Q ss_pred             cCCHHHHHHHHHH
Q 005797          246 IYKNEYIEALYTF  258 (677)
Q Consensus       246 i~~~~~l~~L~~~  258 (677)
                      +.+..|...++..
T Consensus       255 Vqt~~QY~f~y~~  267 (273)
T d1l8ka_         255 IQTPDQLRFSYMA  267 (273)
T ss_dssp             SCSHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH
Confidence            9999988877654


No 28 
>d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]}
Probab=98.21  E-value=1.9e-06  Score=87.61  Aligned_cols=86  Identities=21%  Similarity=0.287  Sum_probs=62.0

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHH----HHHhc----CCCHHHHHHHHHhcC
Q 005797          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHF----LMRSQ----SMSVAQAIKKFAEVR  242 (677)
Q Consensus       171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aY----Lm~~~----~~s~~eAi~~~~~~R  242 (677)
                      .+|++.+.+...+..|+..+..... .....++|+|||.+|.||||++||..    +|...    ..++.+++..+|+.|
T Consensus       178 Wpd~~vP~~~~~~l~l~~~v~~~~~-~~~~~~PivVHCs~G~gRtGtf~ald~~~~~l~~~~~~~~vdV~~~v~~lR~qR  256 (297)
T d2f71a1         178 WPDFGVPESPASFLNFLFKVRESGS-LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFR  256 (297)
T ss_dssp             CCTTCCCSCHHHHHHHHHHHHHTTT-TCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHTTTS
T ss_pred             cccCCCCCCHHHHHHHHHHHHHhhc-cCCCCceEEEeeccccCceehhHHHHHHHHHHHhhcCCCccCHHHHHHHHHhhc
Confidence            3455444456667777766654322 12234699999999999999999864    34432    258999999999999


Q ss_pred             CCCcCCHHHHHHHHH
Q 005797          243 PPGIYKNEYIEALYT  257 (677)
Q Consensus       243 p~~i~~~~~l~~L~~  257 (677)
                      +..+.+..|...++.
T Consensus       257 ~~~Vqt~~QY~f~y~  271 (297)
T d2f71a1         257 MGLIQTADQLRFSYL  271 (297)
T ss_dssp             TTCSCSHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHH
Confidence            999999988876653


No 29 
>d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]}
Probab=98.20  E-value=1.3e-06  Score=88.28  Aligned_cols=86  Identities=17%  Similarity=0.267  Sum_probs=63.7

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHH----HhcC----CCHHHHHHHHHhcC
Q 005797          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM----RSQS----MSVAQAIKKFAEVR  242 (677)
Q Consensus       171 ~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm----~~~~----~s~~eAi~~~~~~R  242 (677)
                      .++++.+.+...+..|+..+...... ....++|+|||.+|.||||++||+..+    ...+    .++-+++..+|+.|
T Consensus       175 Wpd~~~P~~~~~~l~l~~~v~~~~~~-~~~~~PivVHCs~G~gRtG~fial~~~~~~l~~~~~~~~vdv~~~v~~lR~qR  253 (284)
T d1fpra_         175 WPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQR  253 (284)
T ss_dssp             SCTTSCCSCSHHHHHHHHHHHHHHTT-STTCCCEEEESSBSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHHHTTS
T ss_pred             CCccCCCCCHHHHHHHHHHHHHHHhh-cCCCCCEEEEeCCCCccchHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhhC
Confidence            34553333567788888777665432 233569999999999999999986543    2323    68999999999999


Q ss_pred             CCCcCCHHHHHHHHH
Q 005797          243 PPGIYKNEYIEALYT  257 (677)
Q Consensus       243 p~~i~~~~~l~~L~~  257 (677)
                      +..+.+..|...+++
T Consensus       254 ~~~V~t~~QY~f~y~  268 (284)
T d1fpra_         254 SGMVQTEAQYKFIYV  268 (284)
T ss_dssp             TTSSCSSHHHHHHHH
T ss_pred             ccccCCHHHHHHHHH
Confidence            999999887777764


No 30 
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]}
Probab=98.17  E-value=4.2e-06  Score=84.38  Aligned_cols=63  Identities=22%  Similarity=0.302  Sum_probs=51.7

Q ss_pred             CCceEEEEcCCCCChhHHHHHHHHHH---hcCCCHHHHHHHHHhcCCC-CcCCHHHHHHHHHHHhhc
Q 005797          200 SKKYILVHCTHGHNRTGYMIVHFLMR---SQSMSVAQAIKKFAEVRPP-GIYKNEYIEALYTFYHEK  262 (677)
Q Consensus       200 ~~~~VlVHC~~G~~RTG~li~aYLm~---~~~~s~~eAi~~~~~~Rp~-~i~~~~~l~~L~~~y~~~  262 (677)
                      ..++|+|||.+|.||||+++|+.++.   ....++.+++..+|+.|++ .+.+..|...||+.-...
T Consensus       210 ~~~PivVHCs~GvGRtGtfia~~~~~~~~~~~vdv~~~v~~lR~qR~~~mVqt~~QY~fly~~~~~~  276 (283)
T d1lyva_         210 SKLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQ  276 (283)
T ss_dssp             TSSCCEEECSSSSSHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHHTCTTSSCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHh
Confidence            45799999999999999998775543   2246899999999999975 689999999998876654


No 31 
>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.12  E-value=3.1e-06  Score=85.61  Aligned_cols=83  Identities=18%  Similarity=0.211  Sum_probs=63.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCCc
Q 005797          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPGI  246 (677)
Q Consensus       172 ~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~~~s~~eAi~~~~~~Rp~~i  246 (677)
                      +|++.+.+...+..|+..+...   .....++|+|||.+|.||||+++|+..+..     ...++.+++..+|+.|+..+
T Consensus       193 pd~~~P~~~~~~l~l~~~v~~~---~~~~~~PivVHCs~G~gRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V  269 (288)
T d1yfoa_         193 PDFGVPFTPIGMLKFLKKVKAC---NPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMV  269 (288)
T ss_dssp             CSSSCCSCSHHHHHHHHHHHHH---SCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHSSEECHHHHHHHHTTTSTTSS
T ss_pred             CCCCCCCCHHHHHHHHHHHHHh---ccccCCcEEEEeCCCCcccHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhccccC
Confidence            4664334566777777665432   234567999999999999999988776542     23589999999999999999


Q ss_pred             CCHHHHHHHHH
Q 005797          247 YKNEYIEALYT  257 (677)
Q Consensus       247 ~~~~~l~~L~~  257 (677)
                      .+..|...++.
T Consensus       270 ~t~~QY~f~y~  280 (288)
T d1yfoa_         270 QTDMQYVFIYQ  280 (288)
T ss_dssp             CSHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            99988887765


No 32 
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.93  E-value=6.3e-06  Score=82.67  Aligned_cols=41  Identities=17%  Similarity=0.510  Sum_probs=33.7

Q ss_pred             CCceEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhc
Q 005797          200 SKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV  241 (677)
Q Consensus       200 ~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s~~eAi~~~~~~  241 (677)
                      .+++|++||++|+.|||+++|. |+...|.+-++.++-+...
T Consensus       149 ~~~pvL~HCtaGKDRTG~~aal-lL~llGV~~e~I~~DYllS  189 (272)
T d1ywfa1         149 AGRPVLTHCFAGKDRTGFVVAL-VLEAVGLDRDVIVADYLRS  189 (272)
T ss_dssp             TTCCEEEECSSSSSHHHHHHHH-HHHHTTCCHHHHHHHHHGG
T ss_pred             cCCCEEEecCCCCcchHHHHHH-HHHHcCCCHHHHHHHHHhh
Confidence            5789999999999999965555 5556899999999877665


No 33 
>d1ohea1 c.45.1.1 (A:42-198) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.29  E-value=0.00037  Score=63.18  Aligned_cols=71  Identities=11%  Similarity=0.130  Sum_probs=59.5

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCCCh----hHHHHHHHHHHhcCCCHHHHHHHHHhcCCC
Q 005797          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNR----TGYMIVHFLMRSQSMSVAQAIKKFAEVRPP  244 (677)
Q Consensus       172 ~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~R----TG~li~aYLm~~~~~s~~eAi~~~~~~Rp~  244 (677)
                      .|+ .+.....+-+|+..+.+-+.+.... +..+|||++.-++    +++|||||+|-.++||+++|++.+.+.-|+
T Consensus        46 ~DF-GPLNL~~lyrfc~~l~~~L~~~~~~-~k~Iv~yts~d~~kraNAa~Lig~Y~Vi~l~~sp~~a~~~l~~~~p~  120 (157)
T d1ohea1          46 ADF-GPLNLAMVYRYCCKINKKLKSITML-RKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFGETS  120 (157)
T ss_dssp             SCC-CCCCHHHHHHHHHHHHHHHHCGGGT-TSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTTTCC
T ss_pred             ccc-CCchHHHHHHHHHHHHHHHcChhhc-CCeEEEECCCCHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCC
Confidence            466 4889999999999999988755444 4577999987776    899999999999999999999998877554


No 34 
>d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=93.32  E-value=0.41  Score=47.41  Aligned_cols=161  Identities=16%  Similarity=0.140  Sum_probs=87.2

Q ss_pred             cCCeEEEEcccceEEEEEEECC-EEEEEeCCCccc--cccCcCCCcCC-CCcccccCCCCeeeeEEEEEecC--------
Q 005797          363 QRYYYATWKADGTRYMMLITID-GCYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL--------  430 (677)
Q Consensus       363 ~~~Y~V~eK~DG~R~ll~i~~~-~vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~--------  430 (677)
                      ...|+|++|.||+-+++....+ .+.+++|.+-..  .|+..+..... +..+  .......+.||+++.+.        
T Consensus       105 ~~~~~v~~KlDG~si~l~Y~~G~l~~a~TRGdG~~GeDIT~~~~~i~~iP~~~--~~~~~~~irGE~~~~~~~f~~~~~~  182 (312)
T d1b04a_         105 EAAYVCELAIDGLAVSVRYEDGYFVQGATRGDGTTGEDITENLKTIRSLPLRL--KEPVSLEARGEAFMPKASFLRLNEE  182 (312)
T ss_dssp             SCCEEEEEEESSEEEEEEEETTEEEEEEECTTSSCEEBCHHHHHTCTTSCSBC--SSCCCEEEEEEEECCHHHHHHHHHH
T ss_pred             ccceeeeeeeecceeeeeecccceEEEeecCCcchhhhHHHHHhhhcCCCCcc--CCCcccccccceeeecchhhhhhhh
Confidence            4479999999999998888766 468999964321  11111110000 0000  11245678999997421        


Q ss_pred             ---------CCC----------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccCC
Q 005797          431 ---------PDS----------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRN  485 (677)
Q Consensus       431 ---------~~~----------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~  485 (677)
                               .+.                ....+.|++|.+....+.  ......+.+..|...-...            .
T Consensus       183 ~~~~~~~~f~NpRN~aAG~l~~k~~~~~~~~~l~~~~y~~~~~~~~--~~~~~~e~l~~L~~~gf~~------------~  248 (312)
T d1b04a_         183 RKARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLADAEAL--GIASHSEALDYLQALGFKV------------N  248 (312)
T ss_dssp             HHHC--CCCSCHHHHHHHHHHSSCHHHHHHTCCEEEEEEETTTTTT--TCCBHHHHHHHHHHTTCCC------------C
T ss_pred             hhhccccccchhhHHhhcccccccchhhhhhhhhheeeeccccccc--cchhHHHHHHHHHhcCccc------------c
Confidence                     000                013467888887654432  3455677888887743211            1


Q ss_pred             CCccCCCCCcEEEecceEEchhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEccCC
Q 005797          486 PYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYAR  550 (677)
Q Consensus       486 p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~lLKWKp~~  550 (677)
                      +.        ....+.   +..+.++++.+   ...+.++.||||++-.+..+      +.+....-+=||+|.
T Consensus       249 ~~--------~~~~~~---~~~v~~~~~~~~~~R~~l~Y~iDGIVikvn~~~~~~~lG~ts~~PrwAiA~Kfpa  311 (312)
T d1b04a_         249 PE--------RRRCAN---IDEVIAFVSEWHDKRPQLPYEIDGIVIKVDSFAQQRALGATAKSPRWAIAYKFPA  311 (312)
T ss_dssp             TT--------CEEESS---HHHHHHHHHHHHHHSTTCSSCEEEEEEEECBHHHHHHHCCCSSSCTTEEEEECCC
T ss_pred             cc--------eEEECC---HHHHHHHHHHHHhhhhcCCCCCCeEEEEEcCHHHHHHcCCcCCCCCceEEeCcCC
Confidence            10        011111   22333333333   35778999999998755443      223235566666653


No 35 
>d1ta8a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Enterococcus faecalis [TaxId: 1351]}
Probab=91.85  E-value=1.2  Score=43.80  Aligned_cols=157  Identities=14%  Similarity=0.139  Sum_probs=84.4

Q ss_pred             CCeEEEEcccceEEEEEEECCE-EEEEeCCCccc--ccc---CcCCCcCCCCcccccCCCCeeeeEEEEEecC-------
Q 005797          364 RYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ---MRFPCRNSNEGLGEKTHHFTLLDGEMIIDKL-------  430 (677)
Q Consensus       364 ~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~---~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~-------  430 (677)
                      ..|+|++|.||+-+.+...++. +.+++|.+-..  .++   ...+...  ..+  .......+=||+++.+.       
T Consensus       109 ~~~~~~~KiDG~si~l~Y~~G~l~~a~TRGdG~~GeDiT~~~~~i~~ip--~~l--~~~~~~~iRGEl~~~~~~f~~~n~  184 (313)
T d1ta8a_         109 VAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVP--MRL--TEPISVEVRGECYMPKQSFVALNE  184 (313)
T ss_dssp             CCEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSC--SBC--SSCCCEEEEEEEECCHHHHHHHHH
T ss_pred             cceeeeeecccceEEEEecCCcEEEeeecccchHHHHHHHhhhhhcccc--ccc--cCCcceeeeeEEEEeccchhhhHH
Confidence            4799999999999988877664 68999984321  111   1111100  011  11345788999997321       


Q ss_pred             -----CCC---------------------CCceeEEEEeEEeecCCccccCCCHHHHHHHHHHHhcCccchhcccccccC
Q 005797          431 -----PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSR  484 (677)
Q Consensus       431 -----~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~  484 (677)
                           ...                     ....+.|++|++....+..  .....+.+..+.+.....            
T Consensus       185 ~~~~~~~~~f~N~RN~vaG~l~~k~~~~~~~~~l~f~~y~v~~~~~~~--~~~~~~~~~~l~~~g~~~------------  250 (313)
T d1ta8a_         185 EREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMK--AKTQFEALEELSAIGFRT------------  250 (313)
T ss_dssp             HHHHTTCCCCSSHHHHHHHHHTCSBHHHHHTSCCEEEEEEESCCTTCC--CSBHHHHHHHHHHTTCCC------------
T ss_pred             HHHHhcccccccchhhhcccchhcccchhhhccccceeeecceecccc--cchhHHHhhhhhhcCCcC------------
Confidence                 000                     0134688888887655433  233455555565532211            


Q ss_pred             CCCccCCCCCcEEEecceEEchhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEccC
Q 005797          485 NPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYA  549 (677)
Q Consensus       485 ~p~~~~~~~pf~i~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~lLKWKp~  549 (677)
                      .+.        ....+   .+..+..+.+.+   ...+.++.||||++-.+-.+      +.+....-+=||+|
T Consensus       251 ~~~--------~~~~~---~~~ei~~~~~~~~~~R~~l~YeIDGIVikvn~~~~q~~lG~ts~~PrwAiA~KfP  313 (313)
T d1ta8a_         251 NPE--------RQLCQ---SIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFP  313 (313)
T ss_dssp             CTT--------CEEES---SHHHHHHHHHHHHHTGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECC
T ss_pred             CCC--------eEEeC---CHHHHHHHHHHHHHhhhcCCCCCceEEEEEeCHHHHHHcCCcCCCCCceEEecCC
Confidence            111        11111   122333333333   34678999999998744433      22223456667765


No 36 
>d1dgsa3 d.142.2.2 (A:1-314) Adenylation domain of NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}
Probab=89.81  E-value=1.8  Score=42.62  Aligned_cols=160  Identities=15%  Similarity=0.102  Sum_probs=80.2

Q ss_pred             CCeEEEEcccceEEEEEEECCEEEEEeCCCccc--cccCcCCCcCC-CCcccccCCCCeeeeEEEEEecC----------
Q 005797          364 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL----------  430 (677)
Q Consensus       364 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~----------  430 (677)
                      ..|+|++|.||+=+ |+.. +|+.+++|-+-..  .++........ +..+ ........+=||+++.+.          
T Consensus       109 ~~~~ve~KlDG~Si-L~y~-~Gv~~~TRGdG~~GeDiT~~~~~I~~iP~~l-~~~~~~l~IRGEl~i~~~~F~~~n~~~~  185 (314)
T d1dgsa3         109 SLYTVEHKVDGLSV-LYYE-EGVWSTGSGDGEVGEEVTQNLLTIPTIPRRL-KGVPDRLEVRGEVYMPIEAFLRLNEELE  185 (314)
T ss_dssp             CEEEEEECCSCEEE-EEEE-TTEEEEEECSSSEEEBCTGGGTSSTTSCSBC-SSCCSEEEEEEEEECCHHHHHHHHHHHH
T ss_pred             chhhhhhccCcceE-EEec-CCEeEEeecCCceehhhHhhHhhhcCcchhc-cCCCccceeeeeEEeecchHHHHHHHHH
Confidence            35999999999988 4444 4488889964321  12211111100 0011 011234678899997421          


Q ss_pred             --CCC---------------------CCceeEEEEeEEeecCCcc-ccCCCHHHHHHHHHHHhcCccchhcccccccCCC
Q 005797          431 --PDS---------------------RRQERRYLIYDMMAINQAS-VIERPFYERWKMLEKEVIEPRNYERHNIYQSRNP  486 (677)
Q Consensus       431 --~~~---------------------~~~~~~yliFDiL~~~G~~-l~~~pf~eR~~~L~~~i~~pr~~~~~~i~~~~~p  486 (677)
                        +..                     ....+.|++|.+....+.. -......+.+..+......-            . 
T Consensus       186 ~~~~~~f~NpRN~aaG~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~g~~~------------~-  252 (314)
T d1dgsa3         186 ERGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGLEESGLKSQYELLLWLKEKGFPV------------E-  252 (314)
T ss_dssp             HHTCCCCSSHHHHHHHHHSCSSHHHHHHSCCEEECCCBCTTTTTTSCCCCBHHHHHHHHHHTTCCC------------C-
T ss_pred             HhcCCcccccchhhhhhhhcccchhhhhccccceeeeccccccccCCCcccHHHHHHhhhcccccC------------C-
Confidence              000                     0123466666665544432 23345667887777643210            0 


Q ss_pred             CccCCCCCcEEEecceEEchhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEccC
Q 005797          487 YYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYA  549 (677)
Q Consensus       487 ~~~~~~~pf~i~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~lLKWKp~  549 (677)
                             +..-.   ...+..+.++++.+   ...+.++.||||++=.+..+      +.+....-+=||+|
T Consensus       253 -------~~~~~---~~~~e~l~~~~~~~~~~R~~l~y~iDGiVikvnd~~~q~~LG~ts~~PrwAiA~KfP  314 (314)
T d1dgsa3         253 -------HCYEK---ALGAEGVEEVYRRGLAQRHALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFP  314 (314)
T ss_dssp             -------SCEEE---EEHHHHHHHHHHHHHHTTTTSSSCCCEEEEEESBTHHHHHSCBCSSCBSSEEEEECC
T ss_pred             -------cceEE---ECCHHHHHHHHHHHHHhhhcCCCCCCceEEEEeCHHHHHHhCcccCCCCceEEecCC
Confidence                   00011   11122333444433   34677999999998654332      22223445556654


No 37 
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=79.15  E-value=3.9  Score=34.78  Aligned_cols=79  Identities=16%  Similarity=0.246  Sum_probs=44.0

Q ss_pred             CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcE----EEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccC
Q 005797          125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIK----HVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHS  200 (677)
Q Consensus       125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~----y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~  200 (677)
                      -+|.++.+.++. +.++ .|||++.      +++++..++.    ..++|.         ..+...+.      .....+
T Consensus        25 Isp~e~~~ll~~-~~~~-~lIDvR~------~~E~~~~hip~i~~a~~ip~---------~~l~~~~~------~~~~~~   81 (137)
T d1qxna_          25 LSPKDAYKLLQE-NPDI-TLIDVRD------PDELKAMGKPDVKNYKHMSR---------GKLEPLLA------KSGLDP   81 (137)
T ss_dssp             ECHHHHHHHHHH-CTTS-EEEECCC------HHHHHHTCEECCSSEEECCT---------TTSHHHHH------HHCCCT
T ss_pred             EcHHHHHHHHHc-CcCE-EEEECCc------HHHHHHhccccccccccCCc---------cccccccc------ccccCc
Confidence            467888877764 3344 6889983      4566665542    233332         11111111      111346


Q ss_pred             CceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005797          201 KKYILVHCTHGHNRTGYMIVHFLMRSQSM  229 (677)
Q Consensus       201 ~~~VlVHC~~G~~RTG~li~aYLm~~~~~  229 (677)
                      +..|+|+|..| +||. .++.+|. ..|+
T Consensus        82 ~~~ivvyC~~G-~rs~-~aa~~L~-~~G~  107 (137)
T d1qxna_          82 EKPVVVFCKTA-ARAA-LAGKTLR-EYGF  107 (137)
T ss_dssp             TSCEEEECCSS-SCHH-HHHHHHH-HHTC
T ss_pred             ccceeeeeccc-chHH-HHHHHHH-HcCC
Confidence            78899999988 6765 3444454 4565


No 38 
>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.58  E-value=3  Score=42.16  Aligned_cols=25  Identities=24%  Similarity=0.464  Sum_probs=19.3

Q ss_pred             CCceEEEEcCCCCChhHHHHHHHHH
Q 005797          200 SKKYILVHCTHGHNRTGYMIVHFLM  224 (677)
Q Consensus       200 ~~~~VlVHC~~G~~RTG~li~aYLm  224 (677)
                      .+..|+|||..|..||..+++.-.+
T Consensus       211 ~~~sVlVh~sdGwD~T~qvsSL~ql  235 (387)
T d1zsqa2         211 GKTSVVVHSSDGWDRTAQLTSLAML  235 (387)
T ss_dssp             TCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred             CCCeEEEeCCCCCchhHHHHHHHHH
Confidence            3458999999999999876654443


No 39 
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=67.68  E-value=7.7  Score=31.14  Aligned_cols=78  Identities=13%  Similarity=0.324  Sum_probs=45.1

Q ss_pred             CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceE
Q 005797          125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (677)
Q Consensus       125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~V  204 (677)
                      -++.++.+.++.  .+ ..|||++.      +.+|...     +||  |--.+| .+.+..++       .+ ..++..|
T Consensus         7 Is~~e~~~~l~~--~~-~~liDvR~------~~e~~~g-----hI~--gA~~ip-~~~l~~~~-------~~-~~~~~~i   61 (108)
T d1gmxa_           7 INVADAHQKLQE--KE-AVLVDIRD------PQSFAMG-----HAV--QAFHLT-NDTLGAFM-------RD-NDFDTPV   61 (108)
T ss_dssp             ECHHHHHHHHHT--TC-CEEEECSC------HHHHHHC-----EET--TCEECC-HHHHHHHH-------HH-SCTTSCE
T ss_pred             eCHHHHHHHHHC--CC-eEEEECCC------HHHHHhc-----CCC--Cccccc-chhHHHHh-------hh-ccccCcc
Confidence            357788777764  23 36899984      3455432     222  221244 34444433       22 2457889


Q ss_pred             EEEcCCCCChhHHHHHHHHHHhcCCC
Q 005797          205 LVHCTHGHNRTGYMIVHFLMRSQSMS  230 (677)
Q Consensus       205 lVHC~~G~~RTG~li~aYLm~~~~~s  230 (677)
                      +|+|..|. ||. .+|.+|.. .|++
T Consensus        62 vv~c~~g~-rs~-~~a~~L~~-~G~~   84 (108)
T d1gmxa_          62 MVMCYHGN-SSK-GAAQYLLQ-QGYD   84 (108)
T ss_dssp             EEECSSSS-HHH-HHHHHHHH-HTCS
T ss_pred             cccCCCCh-HHH-HHHHHHHH-cCCC
Confidence            99999884 765 45666665 5774


No 40 
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=63.96  E-value=4.5  Score=34.70  Aligned_cols=94  Identities=15%  Similarity=0.187  Sum_probs=47.7

Q ss_pred             CCCHHHHHHHHHHcCCCeeEEEEcCCCCCCC------CcchhhhCC-c-EEEEEecC----CCCCCCCHHHHHHHHHHHH
Q 005797          124 RYSFKQVIHQLRVLGRKLGLVIDLTNTTRYY------PTSDLKKEG-I-KHVKIQCK----GRDAVPDNASVNNFVYEVT  191 (677)
Q Consensus       124 r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y------~~~~~~~~g-I-~y~~ip~~----d~~~~P~~e~i~~f~~~v~  191 (677)
                      .-+.+++.+.+...  + ..|||.+...+|.      ++.... .| | .-+++|..    ..+..++.+.+.+.+... 
T Consensus        12 i~~~~ev~~~l~~~--~-~~iiD~R~~~ef~G~~~~~~~~~~~-~GhIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~-   86 (144)
T d1rhsa2          12 LKTYEQVLENLESK--R-FQLVDSRAQGRYLGTQPEPDAVGLD-SGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAK-   86 (144)
T ss_dssp             EECHHHHHHHHHHC--C-SEEEECSCHHHHHTSSCCSSSSSCC-CCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHT-
T ss_pred             eecHHHHHHHhcCC--C-cEEEECCCCHHHcCCCCCCccccce-eeehhhhhhcchhhhhhhhcccCCHHHHHHHHHHc-
Confidence            44677888777542  2 4589998533221      111011 11 0 12233322    112344566666544321 


Q ss_pred             HHHHhcccCCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005797          192 QFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (677)
Q Consensus       192 ~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s  230 (677)
                           ...++..|.++|..|. |++. + +++++..|+.
T Consensus        87 -----gi~~~~~iI~yC~sG~-~A~~-~-~~~l~~lG~~  117 (144)
T d1rhsa2          87 -----KVDLTKPLIATCRKGV-TACH-I-ALAAYLCGKP  117 (144)
T ss_dssp             -----TCCTTSCEEEECSSSS-THHH-H-HHHHHHTTCC
T ss_pred             -----CCCCCCCEEEEecccc-hHHH-H-HHHHHHcCCC
Confidence                 1346688999998886 5543 3 3455666763


No 41 
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=60.36  E-value=1.1  Score=37.34  Aligned_cols=28  Identities=21%  Similarity=0.325  Sum_probs=18.9

Q ss_pred             cCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005797          199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM  229 (677)
Q Consensus       199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~  229 (677)
                      .++..|+|+|..|. ||. .++.+|.. .|+
T Consensus        70 ~~~~~iv~~C~~G~-rs~-~a~~~L~~-~G~   97 (119)
T d1tq1a_          70 GQSDNIIVGCQSGG-RSI-KATTDLLH-AGF   97 (119)
T ss_dssp             CTTSSEEEEESSCS-HHH-HHHHHHHH-HHC
T ss_pred             CCCcEEEEEcCCcC-cHH-HHHHHHHh-ccc
Confidence            46788999999885 765 45555544 455


No 42 
>d1xdna_ d.142.2.4 (A:) RNA editing ligase MP52 {Trypanosoma brucei [TaxId: 5691]}
Probab=53.16  E-value=22  Score=33.30  Aligned_cols=108  Identities=16%  Similarity=0.133  Sum_probs=60.1

Q ss_pred             hhhccCCeEEEEcccceEEEEEEE----CCEEEEEeCCCccccccCcCCC----cCCC-C------cccc-----cCCCC
Q 005797          359 QLLRQRYYYATWKADGTRYMMLIT----IDGCYLIDRCFNFRRVQMRFPC----RNSN-E------GLGE-----KTHHF  418 (677)
Q Consensus       359 ~~l~~~~Y~V~eK~DG~R~ll~i~----~~~vyLidR~~~~~~v~~~FP~----~~~~-~------~~~~-----~~~~~  418 (677)
                      .-|....|+|+||.+|.-+-+++.    ++.+-.=.|+.-+ ..+-.|=-    +... .      .+..     .....
T Consensus        24 ~gl~~~ewVa~EKIHGaNFsii~~~~~dg~~V~~aKR~~~l-~~~e~Ffgy~~i~~~l~~~~~~l~~~l~~~~~v~~~~~  102 (265)
T d1xdna_          24 SGLAAQEWVACEKVHGTNFGIYLINQGDHEVVRFAKRSGIM-DPNENFFGYHILIDEFTAQIRILNDLLKQKYGLSRVGR  102 (265)
T ss_dssp             TTGGGSCEEEEEECCSEEEEEEEEEETTEEEEEEEETTEEC-CTTCCCTTGGGGHHHHHHHHHHHHHHHHHHHTCSCCSE
T ss_pred             cCcccceEEEEEeecCccEEEEEeecCCCcEEEEeeccccc-CCcccccchhhHHHHHHHHHHHHHHHHHhhhccCCccE
Confidence            345667899999999999988873    2334444554321 11111100    0000 0      0000     11234


Q ss_pred             eeeeEEEEEecCCC--------------C----------CC-------ceeEEEEeEEeecCC---ccccCCCHHHHHHH
Q 005797          419 TLLDGEMIIDKLPD--------------S----------RR-------QERRYLIYDMMAINQ---ASVIERPFYERWKM  464 (677)
Q Consensus       419 tlLDGElV~d~~~~--------------~----------~~-------~~~~yliFDiL~~~G---~~l~~~pf~eR~~~  464 (677)
                      .++=|||+--..+.              +          ++       ....|++|||.+..+   .++.-+++++=.+.
T Consensus       103 ~vvyGELfGg~Y~hp~v~~~~~~~~~~~g~~~~~~~~~iQk~~~v~Y~p~l~FyAFDI~~~~~~~~~~~~fl~~d~~~e~  182 (265)
T d1xdna_         103 LVLNGELFGAKYKHPLVPKSEKWCTLPNGKKFPIAGVQIQREPFPQYSPELHFFAFDIKYSVSGAEEDFVLLGYDEFVEF  182 (265)
T ss_dssp             EEEEEEEEEEECCCTTSCCCCCEEECTTSCEEEGGGCCSCCCSSCCCEEEEEEEEEEEEEESSCCGGGEEECCHHHHHHH
T ss_pred             EEEEEEecccccCCCcccccccccccccCccccccceeeccccccccCCCccEEEEEEEeccCCCcceeeeccHHHHHHH
Confidence            78999998621110              0          11       136999999999865   35566888877766


Q ss_pred             HHH
Q 005797          465 LEK  467 (677)
Q Consensus       465 L~~  467 (677)
                      ..+
T Consensus       183 ~~~  185 (265)
T d1xdna_         183 SSK  185 (265)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            665


No 43 
>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.83  E-value=27  Score=28.40  Aligned_cols=83  Identities=7%  Similarity=0.108  Sum_probs=40.9

Q ss_pred             CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcE-EEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceE
Q 005797          126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIK-HVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (677)
Q Consensus       126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~-y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~V  204 (677)
                      +|++|.+.++....++ .|||++..      +++....|. -+++|..-....-....+...+.......-........|
T Consensus         4 s~~eL~~~l~~~~~~~-liiDvR~~------~ey~~~hI~gAinip~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i   76 (135)
T d2gwfa1           4 TAKELYTMMTDKNISL-IIMDARRM------QDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV   76 (135)
T ss_dssp             CHHHHHHHHHSTTSCE-EEEECSCH------HHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEE
T ss_pred             CHHHHHHHHhcCCCCE-EEEEecCC------ccccCCccCCeEEeCHHHcccccchhhhhhhhhHHHHHHHhccCCCCeE
Confidence            5778888777544444 59999842      233332221 144665432111122333222111111111123456789


Q ss_pred             EEEcCCCCChh
Q 005797          205 LVHCTHGHNRT  215 (677)
Q Consensus       205 lVHC~~G~~RT  215 (677)
                      +|||..|-.+.
T Consensus        77 V~yd~~s~~~~   87 (135)
T d2gwfa1          77 VLLDWFSSAKD   87 (135)
T ss_dssp             EEECSSCCGGG
T ss_pred             EEEeCCCCccc
Confidence            99999886653


No 44 
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=39.69  E-value=38  Score=28.02  Aligned_cols=81  Identities=16%  Similarity=0.285  Sum_probs=42.2

Q ss_pred             CCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCce
Q 005797          124 RYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKY  203 (677)
Q Consensus       124 r~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~  203 (677)
                      .-++.++.+.++. +.+ -.|||++.      +.++....|       +|--.+|. ..+...   +.+. .  .+.+..
T Consensus        25 ~Is~~el~~~l~~-~~~-~~liDvR~------~~e~~~ghI-------pGAi~ip~-~~l~~~---~~~l-~--~~~~~~   82 (136)
T d1yt8a1          25 SLAAEEVQALLDA-RAE-AVILDARR------FDEYQTMSI-------PGGISVPG-AELVLR---VAEL-A--PDPRTR   82 (136)
T ss_dssp             EECHHHHHHHHHT-TCS-EEEEECSC------HHHHHHSBC-------TTCEECCG-GGHHHH---HHHH-C--CSTTSE
T ss_pred             ccCHHHHHHHHhc-CCC-cEEEEcCC------hhhccceec-------CCchhhhh-hHHHHH---hhcc-c--ccccce
Confidence            3567888766643 333 45999984      334443221       12112342 222222   2221 1  235678


Q ss_pred             EEEEcCCCCChhHHHHHHHHHHhcCC
Q 005797          204 ILVHCTHGHNRTGYMIVHFLMRSQSM  229 (677)
Q Consensus       204 VlVHC~~G~~RTG~li~aYLm~~~~~  229 (677)
                      |+|+|..| .||. .++.+|.. .|+
T Consensus        83 iV~~C~~g-~rs~-~aa~~L~~-~G~  105 (136)
T d1yt8a1          83 VIVNCAGR-TRSI-IGTQSLLN-AGI  105 (136)
T ss_dssp             EEEECSSS-HHHH-HHHHHHHH-TTC
T ss_pred             EEEEcCCC-CchH-HHHHHHHH-cCC
Confidence            99999888 4765 44555554 555


No 45 
>d1skza1 g.3.15.1 (A:7-58) Factor Xa inhibitor antistasin {Mexican leech (Haementeria officinalis) [TaxId: 6410]}
Probab=37.58  E-value=2  Score=29.04  Aligned_cols=19  Identities=37%  Similarity=0.571  Sum_probs=15.0

Q ss_pred             ccCCceEEEEcCCCCChhH
Q 005797          198 KHSKKYILVHCTHGHNRTG  216 (677)
Q Consensus       198 ~~~~~~VlVHC~~G~~RTG  216 (677)
                      .-.|-..-|||-||+.||-
T Consensus        21 tcsgvrcrvhcphgfqrsr   39 (52)
T d1skza1          21 TCSGVRCRVHCPHGFQRSR   39 (52)
T ss_dssp             CBCCCSSCCCCTTCEEECT
T ss_pred             eeccceEEEECCCcccccc
Confidence            3456677899999999884


No 46 
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=33.28  E-value=17  Score=29.95  Aligned_cols=81  Identities=9%  Similarity=0.141  Sum_probs=43.1

Q ss_pred             CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhhhCCcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhcccCCceE
Q 005797          125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (677)
Q Consensus       125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~e~i~~f~~~v~~fi~~~~~~~~~V  204 (677)
                      -++.++.+.+.. +..-..|||++.      +.++....       ++|.-.+|. ..+..+..    .+.  ...++.|
T Consensus        25 I~~~e~~~~l~~-~~~~~~liDvR~------~~e~~~gh-------ipgai~~p~-~~~~~~~~----~~~--~~~~~~i   83 (130)
T d1yt8a4          25 LDLAGLAQWQDE-HDRTTYLLDVRT------PEEYEAGH-------LPGSRSTPG-GQLVQETD----HVA--SVRGARL   83 (130)
T ss_dssp             ECHHHHHHHHHC-TTSCEEEEECSC------HHHHHHCB-------CTTCEECCH-HHHHHSHH----HHC--CSBTCEE
T ss_pred             cCHHHHHHHHHc-cCCCEEEEECCC------cHHHhcCc-------cCCcccccc-cccccccc----ccc--CCccceE
Confidence            356666655542 323356899994      34454321       223212332 33332221    121  3467899


Q ss_pred             EEEcCCCCChhHHHHHHHHHHhcCC
Q 005797          205 LVHCTHGHNRTGYMIVHFLMRSQSM  229 (677)
Q Consensus       205 lVHC~~G~~RTG~li~aYLm~~~~~  229 (677)
                      +|+|..| .||. .++.+|.. .|+
T Consensus        84 vl~C~~G-~rS~-~aa~~L~~-~G~  105 (130)
T d1yt8a4          84 VLVDDDG-VRAN-MSASWLAQ-MGW  105 (130)
T ss_dssp             EEECSSS-SHHH-HHHHHHHH-TTC
T ss_pred             EeecCCC-ccHH-HHHHHHHH-cCC
Confidence            9999988 5765 46666664 565


No 47 
>d3e46a1 a.5.2.1 (A:157-198) Ubiquitin-conjugating enzyme E2-25 kDa, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.91  E-value=21  Score=23.09  Aligned_cols=28  Identities=25%  Similarity=0.476  Sum_probs=21.2

Q ss_pred             cCCCCChhHHHHHHHHHHhcCCCHHHHHHHH
Q 005797          208 CTHGHNRTGYMIVHFLMRSQSMSVAQAIKKF  238 (677)
Q Consensus       208 C~~G~~RTG~li~aYLm~~~~~s~~eAi~~~  238 (677)
                      |..|+.|.+.+++.   ....|.++.|-+.+
T Consensus        14 ca~gf~knavi~al---sskswdvetatell   41 (42)
T d3e46a1          14 CAAGFDRNAVIVAL---SSKSWDVETATELL   41 (42)
T ss_dssp             HHTTCCHHHHHHHH---HHTTTCHHHHHHHH
T ss_pred             HHccccccceeeee---ccCccchhhHHHhh
Confidence            89999998765542   35799999987653


No 48 
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.93  E-value=1.2e+02  Score=22.76  Aligned_cols=29  Identities=10%  Similarity=-0.062  Sum_probs=18.6

Q ss_pred             cCCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005797          199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (677)
Q Consensus       199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s  230 (677)
                      .....|+++|..| .||. . ++.++...|++
T Consensus        56 ~~~~~vv~~~~~g-~~s~-~-~~~~l~~~G~~   84 (101)
T d1yt8a2          56 RRDTPITVYDDGE-GLAP-V-AAQRLHDLGYS   84 (101)
T ss_dssp             CTTSCEEEECSSS-SHHH-H-HHHHHHHTTCS
T ss_pred             ccCceeeeccchh-hhHH-H-HHHHHHHcCCC
Confidence            4567899999887 4664 3 34444556763


No 49 
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=26.38  E-value=40  Score=26.71  Aligned_cols=30  Identities=17%  Similarity=0.340  Sum_probs=19.3

Q ss_pred             ccCCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005797          198 KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (677)
Q Consensus       198 ~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s  230 (677)
                      ...+..|+++|..|. |++ .++. +++..|++
T Consensus        79 ~~~~~~ii~yC~sG~-~A~-~~~~-~L~~lG~~  108 (120)
T d1urha2          79 VSYDKPIIVSCGSGV-TAA-VVLL-ALATLDVP  108 (120)
T ss_dssp             CCSSSCEEEECCSSS-THH-HHHH-HHHHTTCS
T ss_pred             cCccCceEEEccchh-HHH-HHHH-HHHHcCCC
Confidence            456778999999886 444 3333 34556763


No 50 
>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=25.43  E-value=62  Score=26.86  Aligned_cols=29  Identities=21%  Similarity=0.158  Sum_probs=17.2

Q ss_pred             cCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005797          199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM  229 (677)
Q Consensus       199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~  229 (677)
                      .++..|.|+|..|. |+ ..++..|-...|+
T Consensus        87 ~~d~~vV~yC~~G~-~A-s~~~~~l~~~~G~  115 (141)
T d1uara2          87 TKDKDIVVYCRIAE-RS-SHSWFVLKYLLGY  115 (141)
T ss_dssp             CTTSEEEEECSSHH-HH-HHHHHHHHTTSCC
T ss_pred             CCCCeEEEEecCcc-hH-HHHHHHHHHHcCC
Confidence            46789999998773 43 3333333323465


No 51 
>d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]}
Probab=22.11  E-value=10  Score=30.55  Aligned_cols=12  Identities=25%  Similarity=0.381  Sum_probs=10.5

Q ss_pred             ceEEEEcCCCCC
Q 005797          202 KYILVHCTHGHN  213 (677)
Q Consensus       202 ~~VlVHC~~G~~  213 (677)
                      ++|++.|.+|.+
T Consensus         2 k~IlL~C~~G~S   13 (103)
T d1iiba_           2 KHIYLFSSAGMS   13 (103)
T ss_dssp             EEEEEEESCHHH
T ss_pred             CEEEEECCCCcc
Confidence            579999999976


No 52 
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=21.55  E-value=40  Score=27.89  Aligned_cols=29  Identities=24%  Similarity=0.503  Sum_probs=19.9

Q ss_pred             ccCCceEEEEcCCCCChhHHHHHHHHHHhcCC
Q 005797          198 KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM  229 (677)
Q Consensus       198 ~~~~~~VlVHC~~G~~RTG~li~aYLm~~~~~  229 (677)
                      ..++..|+++|..|. ||+.  ++++++..|+
T Consensus        85 i~~~~~vV~yC~~G~-~a~~--~~~~l~~~G~  113 (136)
T d1e0ca2          85 ITPDKEIVTHCQTHH-RSGL--TYLIAKALGY  113 (136)
T ss_dssp             CCTTSEEEEECSSSS-HHHH--HHHHHHHTTC
T ss_pred             cCCCCceEEeCCChH-HHHH--HHHHHHHcCC
Confidence            356789999998874 5543  4455666676


No 53 
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=20.52  E-value=37  Score=25.95  Aligned_cols=27  Identities=22%  Similarity=0.427  Sum_probs=21.3

Q ss_pred             CCceEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 005797          200 SKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (677)
Q Consensus       200 ~~~~VlVHC~~G~~RTG~li~aYLm~~~~~s  230 (677)
                      .|++|+|-   |.|+||.-+|.||... |+.
T Consensus         4 ~~K~v~Vi---GlG~sG~s~a~~L~~~-g~~   30 (93)
T d2jfga1           4 QGKNVVII---GLGLTGLSCVDFFLAR-GVT   30 (93)
T ss_dssp             TTCCEEEE---CCSHHHHHHHHHHHHT-TCC
T ss_pred             CCCEEEEE---eECHHHHHHHHHHHHC-CCE
Confidence            46678775   9999999999999874 553


Done!