Query 005798
Match_columns 676
No_of_seqs 466 out of 2578
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 13:53:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005798.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005798hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02418 delta-1-pyrroline-5-c 100.0 1E-120 2E-125 1048.9 71.8 670 2-676 42-718 (718)
2 TIGR01092 P5CS delta l-pyrroli 100.0 6E-117 1E-121 1020.1 71.5 673 2-675 34-711 (715)
3 PRK00197 proA gamma-glutamyl p 100.0 1.3E-84 2.9E-89 712.8 44.0 407 252-659 4-416 (417)
4 cd07079 ALDH_F18-19_ProA-GPR G 100.0 2.7E-83 5.8E-88 700.1 42.0 398 256-654 2-405 (406)
5 KOG2451 Aldehyde dehydrogenase 100.0 2.3E-81 4.9E-86 631.7 31.9 399 228-655 43-499 (503)
6 KOG2450 Aldehyde dehydrogenase 100.0 8.7E-82 1.9E-86 664.7 30.1 399 230-657 42-498 (501)
7 COG1012 PutA NAD-dependent ald 100.0 8.4E-79 1.8E-83 672.1 39.7 397 229-656 19-470 (472)
8 TIGR00407 proA gamma-glutamyl 100.0 2.5E-78 5.4E-83 655.5 39.1 388 261-649 1-398 (398)
9 PRK11241 gabD succinate-semial 100.0 2.1E-77 4.5E-82 666.2 40.7 397 229-654 31-481 (482)
10 PLN02419 methylmalonate-semial 100.0 7.2E-77 1.6E-81 667.4 40.3 399 229-655 134-590 (604)
11 PLN02174 aldehyde dehydrogenas 100.0 1.2E-76 2.7E-81 655.2 40.6 386 251-655 9-445 (484)
12 TIGR03374 ABALDH 1-pyrroline d 100.0 7.4E-76 1.6E-80 653.3 39.7 397 229-653 21-471 (472)
13 PLN02315 aldehyde dehydrogenas 100.0 3.1E-75 6.7E-80 651.4 39.8 402 229-655 39-495 (508)
14 PLN02766 coniferyl-aldehyde de 100.0 4.7E-75 1E-79 650.9 39.4 398 229-655 41-495 (501)
15 PRK13968 putative succinate se 100.0 1.4E-74 3E-79 642.1 40.6 395 229-654 12-460 (462)
16 PRK09406 gabD1 succinic semial 100.0 1.6E-74 3.5E-79 640.7 40.9 398 229-653 6-456 (457)
17 cd07130 ALDH_F7_AASADH NAD+-de 100.0 1.4E-74 2.9E-79 645.1 39.7 402 229-655 17-473 (474)
18 PLN02278 succinic semialdehyde 100.0 2.1E-74 4.6E-79 645.7 41.4 398 228-654 44-495 (498)
19 PLN02466 aldehyde dehydrogenas 100.0 1.6E-74 3.4E-79 649.3 39.1 398 229-655 78-532 (538)
20 cd07113 ALDH_PADH_NahF Escheri 100.0 2.3E-74 4.9E-79 644.2 40.0 400 229-654 20-476 (477)
21 cd07086 ALDH_F7_AASADH-like NA 100.0 4.8E-74 1E-78 641.8 40.7 401 229-654 18-476 (478)
22 cd07559 ALDH_ACDHII_AcoD-like 100.0 3.5E-74 7.6E-79 642.2 39.5 397 229-654 21-479 (480)
23 cd07117 ALDH_StaphAldA1 Unchar 100.0 4.8E-74 1E-78 639.8 40.4 397 229-654 21-474 (475)
24 PRK13252 betaine aldehyde dehy 100.0 6.8E-74 1.5E-78 642.1 40.4 398 229-655 27-481 (488)
25 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 8.6E-74 1.9E-78 639.9 41.0 396 229-654 21-478 (479)
26 TIGR03216 OH_muco_semi_DH 2-hy 100.0 7.2E-74 1.6E-78 640.8 40.0 400 229-654 19-480 (481)
27 cd07140 ALDH_F1L_FTFDH 10-form 100.0 6.9E-74 1.5E-78 639.2 39.4 400 229-654 26-485 (486)
28 cd07142 ALDH_F2BC Arabidosis a 100.0 5.9E-74 1.3E-78 640.7 38.3 395 229-652 24-475 (476)
29 cd07107 ALDH_PhdK-like Nocardi 100.0 1.7E-73 3.6E-78 634.6 40.8 395 230-654 3-455 (456)
30 cd07148 ALDH_RL0313 Uncharacte 100.0 1.9E-73 4.2E-78 633.1 39.9 398 229-653 4-455 (455)
31 cd07106 ALDH_AldA-AAD23400 Str 100.0 3.9E-73 8.5E-78 630.3 40.8 392 230-652 3-445 (446)
32 TIGR01780 SSADH succinate-semi 100.0 2.1E-73 4.5E-78 632.1 38.1 391 230-649 3-448 (448)
33 PRK13473 gamma-aminobutyraldeh 100.0 2.9E-73 6.3E-78 635.8 39.4 400 228-655 21-474 (475)
34 TIGR02299 HpaE 5-carboxymethyl 100.0 3.9E-73 8.5E-78 636.4 40.1 396 229-655 21-478 (488)
35 cd07151 ALDH_HBenzADH NADP+-de 100.0 5.4E-73 1.2E-77 631.6 40.8 397 229-654 15-464 (465)
36 cd07085 ALDH_F6_MMSDH Methylma 100.0 4.8E-73 1.1E-77 634.1 40.4 399 229-654 21-477 (478)
37 PTZ00381 aldehyde dehydrogenas 100.0 3.5E-73 7.6E-78 632.7 38.9 386 251-655 6-439 (493)
38 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 4.8E-73 1E-77 631.4 39.6 396 230-655 3-456 (457)
39 PLN02467 betaine aldehyde dehy 100.0 4.3E-73 9.4E-78 634.7 39.2 400 229-655 28-489 (503)
40 cd07143 ALDH_AldA_AN0554 Asper 100.0 9.9E-73 2.2E-77 630.2 39.6 396 230-654 28-480 (481)
41 cd07152 ALDH_BenzADH NAD-depen 100.0 1.9E-72 4.1E-77 624.3 41.3 389 235-652 2-442 (443)
42 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 1.6E-72 3.5E-77 630.8 40.5 397 229-654 28-483 (484)
43 cd07110 ALDH_F10_BADH Arabidop 100.0 1.9E-72 4.2E-77 626.4 40.6 394 230-652 3-455 (456)
44 PLN00412 NADP-dependent glycer 100.0 1.9E-72 4.2E-77 629.6 40.3 400 228-655 35-488 (496)
45 cd07147 ALDH_F21_RNP123 Aldehy 100.0 2E-72 4.4E-77 625.9 39.9 398 229-653 4-452 (452)
46 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 2.4E-72 5.2E-77 627.7 40.2 397 229-653 19-473 (473)
47 PLN02203 aldehyde dehydrogenas 100.0 2.8E-72 6.2E-77 622.7 40.5 387 251-656 5-445 (484)
48 cd07115 ALDH_HMSADH_HapE Pseud 100.0 2.8E-72 6.2E-77 624.6 39.8 396 230-654 3-452 (453)
49 cd07145 ALDH_LactADH_F420-Bios 100.0 3.4E-72 7.3E-77 624.5 40.3 397 230-653 5-456 (456)
50 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 3.2E-72 6.9E-77 624.0 39.9 394 230-652 2-453 (454)
51 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 1.8E-72 3.9E-77 624.0 37.5 394 230-653 3-455 (455)
52 cd07109 ALDH_AAS00426 Uncharac 100.0 3.5E-72 7.6E-77 624.0 39.5 393 230-652 3-453 (454)
53 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 3.2E-72 6.9E-77 627.6 39.0 396 229-653 27-480 (481)
54 cd07150 ALDH_VaniDH_like Pseud 100.0 4.2E-72 9.2E-77 623.4 39.8 395 230-653 5-451 (451)
55 cd07094 ALDH_F21_LactADH-like 100.0 6.2E-72 1.4E-76 622.1 40.8 398 229-653 4-453 (453)
56 TIGR01804 BADH glycine betaine 100.0 3.3E-72 7.1E-77 626.0 37.3 392 229-649 18-467 (467)
57 cd07119 ALDH_BADH-GbsA Bacillu 100.0 6.7E-72 1.4E-76 625.9 38.8 397 229-655 18-474 (482)
58 cd07089 ALDH_CddD-AldA-like Rh 100.0 8.8E-72 1.9E-76 620.5 39.4 398 230-653 3-459 (459)
59 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 1.8E-71 3.8E-76 625.2 42.3 426 199-654 13-511 (512)
60 TIGR01237 D1pyr5carbox2 delta- 100.0 1.4E-71 3E-76 625.4 41.0 398 229-654 51-510 (511)
61 cd07118 ALDH_SNDH Gluconobacte 100.0 6.2E-72 1.4E-76 620.9 37.6 393 231-652 4-453 (454)
62 cd07091 ALDH_F1-2_Ald2-like AL 100.0 8.1E-72 1.7E-76 624.3 38.1 396 229-653 24-476 (476)
63 TIGR03250 PhnAcAld_DH putative 100.0 1.6E-71 3.4E-76 619.7 40.0 398 229-655 22-472 (472)
64 cd07123 ALDH_F4-17_P5CDH Delta 100.0 2.1E-71 4.6E-76 624.3 40.1 399 228-654 50-519 (522)
65 cd07108 ALDH_MGR_2402 Magnetos 100.0 2.2E-71 4.8E-76 618.1 39.3 394 230-652 3-456 (457)
66 PRK09457 astD succinylglutamic 100.0 4.2E-71 9.2E-76 618.5 41.4 396 229-655 20-471 (487)
67 TIGR01236 D1pyr5carbox1 delta- 100.0 2.4E-71 5.2E-76 623.5 39.5 400 228-655 50-521 (533)
68 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 2.5E-71 5.5E-76 612.1 38.9 374 254-652 1-428 (429)
69 cd07083 ALDH_P5CDH ALDH subfam 100.0 5.1E-71 1.1E-75 619.8 41.9 398 229-653 37-498 (500)
70 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 2.8E-71 6.2E-76 618.3 39.6 391 229-652 19-465 (466)
71 PRK09847 gamma-glutamyl-gamma- 100.0 2.5E-71 5.3E-76 620.4 38.7 397 229-654 40-492 (494)
72 cd07102 ALDH_EDX86601 Uncharac 100.0 4.9E-71 1.1E-75 615.1 40.4 394 230-652 2-451 (452)
73 cd07098 ALDH_F15-22 Aldehyde d 100.0 5.1E-71 1.1E-75 616.4 40.6 403 230-654 2-464 (465)
74 cd07125 ALDH_PutA-P5CDH Delta( 100.0 5.6E-71 1.2E-75 621.5 41.3 400 228-656 50-509 (518)
75 PRK03137 1-pyrroline-5-carboxy 100.0 8E-71 1.7E-75 619.7 42.5 398 228-654 54-513 (514)
76 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 5.6E-71 1.2E-75 618.2 40.9 399 229-655 19-477 (478)
77 cd07088 ALDH_LactADH-AldA Esch 100.0 4.6E-71 9.9E-76 617.6 40.1 395 229-652 18-467 (468)
78 cd07136 ALDH_YwdH-P39616 Bacil 100.0 3.4E-71 7.4E-76 610.0 38.4 379 256-655 2-428 (449)
79 PRK09407 gabD2 succinic semial 100.0 5.7E-71 1.2E-75 621.7 40.5 396 231-655 39-492 (524)
80 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 5E-71 1.1E-75 617.5 37.6 394 229-652 19-470 (471)
81 TIGR03240 arg_catab_astD succi 100.0 1.4E-70 3E-75 614.4 41.2 396 229-655 18-469 (484)
82 cd07099 ALDH_DDALDH Methylomon 100.0 1.1E-70 2.4E-75 612.3 39.7 395 230-652 2-452 (453)
83 cd07092 ALDH_ABALDH-YdcW Esche 100.0 1.3E-70 2.8E-75 611.3 39.4 395 230-652 3-449 (450)
84 cd07112 ALDH_GABALDH-PuuC Esch 100.0 9.1E-71 2E-75 612.9 38.1 395 230-653 8-462 (462)
85 cd07121 ALDH_EutE Ethanolamine 100.0 7E-71 1.5E-75 604.8 36.0 372 251-653 3-422 (429)
86 TIGR01722 MMSDH methylmalonic 100.0 2.1E-70 4.5E-75 612.3 40.2 398 229-654 21-476 (477)
87 cd07137 ALDH_F3FHI Plant aldeh 100.0 1.5E-70 3.2E-75 604.4 38.1 375 256-653 3-432 (432)
88 cd07111 ALDH_F16 Aldehyde dehy 100.0 9E-71 1.9E-75 613.3 36.2 384 229-650 42-477 (480)
89 cd07105 ALDH_SaliADH Salicylal 100.0 2.3E-70 5.1E-75 605.3 39.0 378 253-653 1-432 (432)
90 cd07132 ALDH_F3AB Aldehyde deh 100.0 3.1E-70 6.8E-75 604.1 39.1 381 256-656 2-429 (443)
91 cd07135 ALDH_F14-YMR110C Sacch 100.0 2.6E-70 5.7E-75 603.1 38.3 383 251-652 4-435 (436)
92 PF00171 Aldedh: Aldehyde dehy 100.0 6.3E-71 1.4E-75 615.2 33.4 393 229-651 12-462 (462)
93 cd07114 ALDH_DhaS Uncharacteri 100.0 2.5E-70 5.3E-75 609.7 37.7 395 230-653 3-457 (457)
94 cd07133 ALDH_CALDH_CalB Conife 100.0 3.6E-70 7.8E-75 602.6 38.5 376 257-652 3-433 (434)
95 cd07146 ALDH_PhpJ Streptomyces 100.0 4.8E-70 1E-74 604.9 39.6 394 230-652 5-450 (451)
96 PRK15398 aldehyde dehydrogenas 100.0 4.7E-70 1E-74 602.8 37.1 377 251-655 35-454 (465)
97 cd07149 ALDH_y4uC Uncharacteri 100.0 1.2E-69 2.6E-74 604.6 40.7 396 230-652 5-452 (453)
98 cd07095 ALDH_SGSD_AstD N-succi 100.0 6.4E-70 1.4E-74 600.1 36.2 374 253-651 1-429 (431)
99 cd07093 ALDH_F8_HMSADH Human a 100.0 2E-69 4.3E-74 602.6 39.2 395 230-653 3-455 (455)
100 cd07104 ALDH_BenzADH-like ALDH 100.0 2.8E-69 6.2E-74 597.8 39.5 377 253-652 1-430 (431)
101 cd07126 ALDH_F12_P5CDH Delta(1 100.0 2.6E-69 5.6E-74 598.3 39.0 379 229-631 17-470 (489)
102 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 3.5E-69 7.5E-74 603.0 40.0 398 229-653 21-472 (473)
103 KOG2456 Aldehyde dehydrogenase 100.0 6.3E-70 1.4E-74 554.1 30.5 383 253-655 3-433 (477)
104 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 3.1E-69 6.8E-74 600.6 39.0 394 230-652 3-450 (451)
105 TIGR01238 D1pyr5carbox3 delta- 100.0 2.3E-69 5E-74 603.6 36.9 407 204-650 24-500 (500)
106 TIGR02278 PaaN-DH phenylacetic 100.0 6.1E-69 1.3E-73 616.2 38.9 395 229-654 20-496 (663)
107 cd07128 ALDH_MaoC-N N-terminal 100.0 5.5E-69 1.2E-73 600.4 37.0 392 229-653 20-503 (513)
108 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 2.5E-68 5.4E-73 584.5 38.3 381 254-653 1-438 (439)
109 PRK11904 bifunctional proline 100.0 6.3E-68 1.4E-72 627.8 42.5 428 201-655 536-1027(1038)
110 PRK11903 aldehyde dehydrogenas 100.0 4.3E-68 9.3E-73 595.0 36.5 395 229-653 24-506 (521)
111 PRK10090 aldehyde dehydrogenas 100.0 3.3E-68 7.1E-73 580.8 34.3 353 280-655 1-408 (409)
112 cd07134 ALDH_AlkH-like Pseudom 100.0 9.9E-68 2.1E-72 583.0 37.8 376 256-652 2-432 (433)
113 cd07087 ALDH_F3-13-14_CALDH-li 100.0 1.1E-67 2.5E-72 582.2 38.1 376 256-652 2-425 (426)
114 TIGR02518 EutH_ACDH acetaldehy 100.0 3.3E-67 7.1E-72 583.5 41.3 381 251-657 7-447 (488)
115 PRK11563 bifunctional aldehyde 100.0 2.5E-67 5.4E-72 606.9 37.4 395 229-654 24-508 (675)
116 cd07129 ALDH_KGSADH Alpha-Keto 100.0 4.7E-67 1E-71 581.0 36.2 380 254-648 1-449 (454)
117 cd07077 ALDH-like NAD(P)+-depe 100.0 2.9E-66 6.3E-71 566.3 40.8 382 259-652 1-396 (397)
118 cd07122 ALDH_F20_ACDH Coenzyme 100.0 1.1E-66 2.5E-71 570.2 35.8 376 254-653 1-435 (436)
119 PRK11809 putA trifunctional tr 100.0 3.5E-66 7.6E-71 617.3 36.6 384 228-650 663-1111(1318)
120 cd07084 ALDH_KGSADH-like ALDH 100.0 1.2E-65 2.7E-70 567.3 37.4 375 255-651 2-440 (442)
121 PRK11905 bifunctional proline 100.0 2.1E-65 4.6E-70 612.6 39.2 389 228-655 571-1019(1208)
122 TIGR02288 PaaN_2 phenylacetic 100.0 4.2E-65 9.1E-70 568.5 38.2 365 230-616 71-517 (551)
123 PRK13805 bifunctional acetalde 100.0 3.2E-64 6.9E-69 596.5 39.3 385 251-658 11-454 (862)
124 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 2.9E-61 6.4E-66 538.9 38.5 391 252-653 84-545 (549)
125 cd07078 ALDH NAD(P)+ dependent 100.0 1.3E-60 2.8E-65 529.2 38.4 374 256-652 2-431 (432)
126 KOG2454 Betaine aldehyde dehyd 100.0 2.9E-62 6.3E-67 492.3 22.5 406 229-655 69-532 (583)
127 cd06534 ALDH-SF NAD(P)+-depend 100.0 5.8E-59 1.3E-63 505.1 35.7 355 260-652 2-366 (367)
128 COG0014 ProA Gamma-glutamyl ph 100.0 3.6E-58 7.9E-63 472.5 34.9 407 253-660 4-417 (417)
129 KOG2452 Formyltetrahydrofolate 100.0 1.9E-55 4.1E-60 451.7 22.6 364 251-654 458-880 (881)
130 COG4230 Delta 1-pyrroline-5-ca 100.0 7.8E-55 1.7E-59 456.7 25.1 376 235-650 139-574 (769)
131 KOG4165 Gamma-glutamyl phospha 100.0 5.9E-50 1.3E-54 396.8 33.9 422 254-675 2-429 (433)
132 KOG2453 Aldehyde dehydrogenase 100.0 2.6E-51 5.7E-56 406.4 15.7 391 251-660 54-499 (507)
133 KOG2455 Delta-1-pyrroline-5-ca 100.0 2.3E-45 4.9E-50 376.2 24.3 380 251-651 95-544 (561)
134 COG0263 ProB Glutamate 5-kinas 100.0 5.1E-43 1.1E-47 356.4 22.3 226 2-244 33-260 (369)
135 KOG1154 Gamma-glutamyl kinase 100.0 9.4E-40 2E-44 311.5 17.3 237 2-245 37-277 (285)
136 PRK13402 gamma-glutamyl kinase 100.0 1.5E-37 3.3E-42 331.1 21.6 224 2-244 32-258 (368)
137 cd04256 AAK_P5CS_ProBA AAK_P5C 100.0 7E-37 1.5E-41 316.8 22.5 239 2-241 36-283 (284)
138 PRK12314 gamma-glutamyl kinase 100.0 1.4E-36 3E-41 312.9 21.7 227 2-244 36-265 (266)
139 TIGR01027 proB glutamate 5-kin 100.0 4.2E-36 9.1E-41 321.7 21.7 226 2-244 27-254 (363)
140 PTZ00489 glutamate 5-kinase; P 100.0 2.5E-35 5.4E-40 301.1 22.3 221 2-244 34-260 (264)
141 cd04242 AAK_G5K_ProB AAK_G5K_P 100.0 3.4E-35 7.3E-40 301.2 22.0 223 2-242 26-251 (251)
142 PRK05429 gamma-glutamyl kinase 100.0 2.8E-35 6E-40 316.7 22.0 225 2-244 35-262 (372)
143 TIGR00746 arcC carbamate kinas 100.0 1.1E-30 2.3E-35 271.7 20.5 217 2-242 31-309 (310)
144 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 2.1E-30 4.7E-35 284.6 24.0 318 253-606 25-390 (422)
145 COG0548 ArgB Acetylglutamate k 100.0 1.8E-30 3.9E-35 260.4 19.6 220 2-242 23-264 (265)
146 PRK12353 putative amino acid k 100.0 5.4E-28 1.2E-32 253.8 20.0 225 2-242 31-313 (314)
147 cd04241 AAK_FomA-like AAK_FomA 100.0 1.3E-27 2.9E-32 245.7 18.8 215 2-241 28-252 (252)
148 CHL00202 argB acetylglutamate 100.0 4.3E-27 9.4E-32 244.9 21.1 221 2-242 44-283 (284)
149 PRK12686 carbamate kinase; Rev 100.0 3.5E-27 7.5E-32 244.0 20.0 225 2-242 31-311 (312)
150 PRK14058 acetylglutamate/acety 99.9 9.4E-27 2E-31 240.8 19.6 221 2-243 17-267 (268)
151 PRK12352 putative carbamate ki 99.9 2.1E-26 4.5E-31 240.0 21.2 227 2-243 33-315 (316)
152 cd04237 AAK_NAGS-ABP AAK_NAGS- 99.9 1.3E-26 2.9E-31 240.5 19.4 220 2-241 38-280 (280)
153 PRK12454 carbamate kinase-like 99.9 2E-26 4.4E-31 237.7 20.2 223 2-242 33-312 (313)
154 cd04235 AAK_CK AAK_CK: Carbama 99.9 2.6E-26 5.7E-31 237.4 19.1 222 2-241 30-307 (308)
155 PLN02512 acetylglutamate kinas 99.9 1.1E-25 2.3E-30 236.8 21.6 221 2-242 68-308 (309)
156 cd02115 AAK Amino Acid Kinases 99.9 1.3E-26 2.9E-31 237.8 13.4 223 2-241 18-248 (248)
157 PRK00942 acetylglutamate kinas 99.9 1.3E-25 2.8E-30 234.6 20.1 219 2-243 44-282 (283)
158 PRK05279 N-acetylglutamate syn 99.9 1.7E-25 3.7E-30 248.1 20.0 225 2-244 45-292 (441)
159 cd04250 AAK_NAGK-C AAK_NAGK-C: 99.9 2.1E-25 4.6E-30 232.3 19.1 220 2-241 35-279 (279)
160 cd04261 AAK_AKii-LysC-BS AAK_A 99.9 2.7E-25 5.8E-30 226.6 16.8 202 2-226 20-233 (239)
161 cd04246 AAK_AK-DapG-like AAK_A 99.9 3.3E-25 7.1E-30 226.0 17.0 202 2-226 20-233 (239)
162 TIGR01890 N-Ac-Glu-synth amino 99.9 1.5E-24 3.3E-29 239.4 21.8 219 2-244 37-280 (429)
163 cd04251 AAK_NAGK-UC AAK_NAGK-U 99.9 7.9E-25 1.7E-29 224.9 17.9 212 2-241 16-257 (257)
164 cd04238 AAK_NAGK-like AAK_NAGK 99.9 1.1E-24 2.3E-29 224.5 18.2 217 2-241 19-256 (256)
165 cd04252 AAK_NAGK-fArgBP AAK_NA 99.9 1E-24 2.3E-29 222.9 17.8 215 1-241 16-248 (248)
166 PRK12354 carbamate kinase; Rev 99.9 9.9E-25 2.1E-29 224.6 17.0 220 2-244 31-301 (307)
167 cd04234 AAK_AK AAK_AK: Amino A 99.9 1.1E-24 2.3E-29 220.3 16.4 190 2-227 20-221 (227)
168 cd04249 AAK_NAGK-NC AAK_NAGK-N 99.9 1.6E-24 3.4E-29 222.7 17.4 216 2-241 19-252 (252)
169 PRK09411 carbamate kinase; Rev 99.9 2.8E-24 6.1E-29 219.2 18.2 214 3-242 33-296 (297)
170 cd04236 AAK_NAGS-Urea AAK_NAGS 99.9 1.1E-24 2.4E-29 222.6 15.2 205 2-241 56-271 (271)
171 PRK00358 pyrH uridylate kinase 99.9 4.9E-24 1.1E-28 216.3 19.7 199 2-241 28-230 (231)
172 PRK14558 pyrH uridylate kinase 99.9 1.4E-23 3E-28 212.8 20.6 195 2-243 28-230 (231)
173 COG0549 ArcC Carbamate kinase 99.9 9.6E-24 2.1E-28 208.9 18.5 228 3-242 32-311 (312)
174 cd04260 AAK_AKi-DapG-BS AAK_AK 99.9 1E-23 2.2E-28 215.4 18.2 201 2-225 20-237 (244)
175 TIGR00761 argB acetylglutamate 99.9 7.2E-24 1.6E-28 215.1 16.8 196 2-219 18-231 (231)
176 cd04255 AAK_UMPK-MosAB AAK_UMP 99.9 1.1E-23 2.5E-28 215.6 17.6 208 2-242 53-262 (262)
177 cd04239 AAK_UMPK-like AAK_UMPK 99.9 1.7E-23 3.7E-28 211.9 18.3 201 2-241 26-228 (229)
178 PRK08841 aspartate kinase; Val 99.9 2.6E-23 5.6E-28 225.1 19.2 213 2-243 22-242 (392)
179 TIGR02075 pyrH_bact uridylate 99.9 2.1E-22 4.5E-27 204.3 20.0 200 2-242 29-233 (233)
180 PRK14556 pyrH uridylate kinase 99.9 3.4E-22 7.4E-27 200.6 18.5 204 2-243 43-248 (249)
181 COG1608 Predicted archaeal kin 99.9 2.8E-22 6.1E-27 194.7 16.2 168 64-242 82-251 (252)
182 TIGR00656 asp_kin_monofn aspar 99.9 2.1E-22 4.5E-27 221.1 17.3 216 2-244 21-244 (401)
183 PRK14557 pyrH uridylate kinase 99.9 9.2E-22 2E-26 199.8 20.5 202 2-244 32-239 (247)
184 cd04254 AAK_UMPK-PyrH-Ec UMP k 99.9 7.1E-22 1.5E-26 200.2 19.2 200 2-242 28-231 (231)
185 PLN02825 amino-acid N-acetyltr 99.9 4.1E-22 8.9E-27 220.1 18.9 225 2-244 37-365 (515)
186 PF00696 AA_kinase: Amino acid 99.9 2.1E-22 4.5E-27 206.0 15.2 206 2-221 22-242 (242)
187 COG0528 PyrH Uridylate kinase 99.9 6.6E-22 1.4E-26 192.6 17.2 200 2-242 33-237 (238)
188 PRK04531 acetylglutamate kinas 99.9 2.7E-21 5.8E-26 208.7 19.0 191 2-244 55-250 (398)
189 PRK06635 aspartate kinase; Rev 99.9 1.3E-21 2.7E-26 215.1 15.6 214 2-244 22-243 (404)
190 TIGR02076 pyrH_arch uridylate 99.9 5.1E-21 1.1E-25 192.9 18.4 197 2-241 22-220 (221)
191 PRK08210 aspartate kinase I; R 99.9 2.9E-21 6.2E-26 211.9 17.1 210 2-244 22-248 (403)
192 COG0527 LysC Aspartokinases [A 99.9 1.1E-20 2.4E-25 206.4 17.8 223 2-244 22-290 (447)
193 PRK07431 aspartate kinase; Pro 99.9 9.4E-21 2E-25 217.3 17.5 216 2-244 22-245 (587)
194 cd04253 AAK_UMPK-PyrH-Pf AAK_U 99.8 3.7E-20 8.1E-25 186.4 17.6 125 100-241 94-220 (221)
195 cd04244 AAK_AK-LysC-like AAK_A 99.8 5.4E-19 1.2E-23 184.9 17.4 169 53-241 118-297 (298)
196 TIGR00657 asp_kinases aspartat 99.8 4.6E-19 1E-23 196.6 16.6 222 2-244 21-284 (441)
197 PRK08373 aspartate kinase; Val 99.8 1.2E-18 2.6E-23 184.0 16.5 168 53-244 102-280 (341)
198 cd04259 AAK_AK-DapDC AAK_AK-Da 99.8 5E-18 1.1E-22 176.8 17.2 169 53-241 111-294 (295)
199 TIGR02078 AspKin_pair Pyrococc 99.8 2.6E-18 5.6E-23 180.5 14.9 168 53-244 97-271 (327)
200 PRK06291 aspartate kinase; Pro 99.8 7.3E-18 1.6E-22 187.7 17.8 172 53-244 122-304 (465)
201 cd04257 AAK_AK-HSDH AAK_AK-HSD 99.8 8.1E-18 1.8E-22 175.4 16.0 169 53-241 117-293 (294)
202 cd04245 AAK_AKiii-YclM-BS AAK_ 99.8 1.1E-17 2.5E-22 173.2 15.8 168 53-241 112-287 (288)
203 PRK09084 aspartate kinase III; 99.7 1.4E-17 3.1E-22 184.0 16.2 171 53-244 109-290 (448)
204 PRK05925 aspartate kinase; Pro 99.7 1.5E-17 3.3E-22 182.3 15.0 171 53-244 102-281 (440)
205 cd04243 AAK_AK-HSDH-like AAK_A 99.7 5.8E-17 1.2E-21 168.9 15.4 169 53-241 116-292 (293)
206 cd04258 AAK_AKiii-LysC-EC AAK_ 99.7 1.1E-16 2.3E-21 166.3 14.5 168 53-241 113-291 (292)
207 PLN02551 aspartokinase 99.7 2.7E-16 5.9E-21 175.5 15.2 172 53-244 165-349 (521)
208 cd04247 AAK_AK-Hom3 AAK_AK-Hom 99.7 4.8E-16 1E-20 162.2 15.1 171 53-243 125-305 (306)
209 PRK09034 aspartate kinase; Rev 99.7 4.2E-16 9.1E-21 172.8 15.4 172 53-244 112-290 (454)
210 PRK08961 bifunctional aspartat 99.6 4.4E-15 9.5E-20 177.0 15.6 171 54-244 120-306 (861)
211 cd04240 AAK_UC AAK_UC: Unchara 99.6 6.7E-15 1.4E-19 145.8 12.9 120 100-241 82-203 (203)
212 PRK09466 metL bifunctional asp 99.6 4.4E-15 9.6E-20 173.8 13.4 171 53-243 122-300 (810)
213 cd04248 AAK_AK-Ectoine AAK_AK- 99.6 1E-14 2.2E-19 150.1 13.9 165 53-242 133-304 (304)
214 PRK09181 aspartate kinase; Val 99.6 1E-14 2.2E-19 161.5 14.6 166 54-244 140-312 (475)
215 PRK09436 thrA bifunctional asp 99.6 1.3E-14 2.8E-19 171.2 15.1 172 53-244 119-298 (819)
216 KOG0456 Aspartate kinase [Amin 99.4 1.2E-12 2.6E-17 134.3 10.1 172 53-244 192-376 (559)
217 PF05893 LuxC: Acyl-CoA reduct 99.3 2.2E-09 4.7E-14 117.2 29.5 244 357-605 81-368 (399)
218 COG2054 Uncharacterized archae 99.0 4.6E-09 9.9E-14 98.1 14.2 117 107-243 91-210 (212)
219 KOG2436 Acetylglutamate kinase 98.8 8.9E-09 1.9E-13 110.4 8.3 223 2-244 114-360 (520)
220 KOG2449 Methylmalonate semiald 98.8 1.7E-09 3.8E-14 96.1 2.4 68 547-614 76-143 (157)
221 PF07368 DUF1487: Protein of u 98.5 1.4E-06 3.1E-11 85.1 11.4 171 476-656 8-212 (215)
222 PRK11905 bifunctional proline 97.9 4.4E-05 9.6E-10 93.8 10.2 101 354-471 1069-1175(1208)
223 PF00815 Histidinol_dh: Histid 96.5 0.9 1.9E-05 49.6 23.8 283 324-653 69-378 (412)
224 cd06572 Histidinol_dh Histidin 95.9 2 4.3E-05 46.7 22.5 283 324-653 56-365 (390)
225 PRK00877 hisD bifunctional his 95.6 4.6 9.9E-05 44.3 25.1 283 324-653 84-392 (425)
226 TIGR00069 hisD histidinol dehy 95.0 4.1 8.9E-05 44.2 21.0 255 353-652 78-360 (393)
227 PLN02926 histidinol dehydrogen 94.6 8.8 0.00019 42.2 25.0 282 324-652 83-394 (431)
228 COG0141 HisD Histidinol dehydr 94.3 1.8 3.8E-05 47.1 16.3 249 324-614 80-349 (425)
229 PRK13770 histidinol dehydrogen 93.5 14 0.0003 40.5 25.8 278 324-653 76-382 (416)
230 PRK13769 histidinol dehydrogen 93.5 13 0.00028 40.1 25.9 213 353-613 83-303 (368)
231 PRK12447 histidinol dehydrogen 93.1 16 0.00036 40.1 25.6 255 353-652 105-386 (426)
232 PRK11809 putA trifunctional tr 80.1 4.2 9.2E-05 51.2 7.6 92 354-461 1178-1269(1318)
233 COG1778 Low specificity phosph 71.2 16 0.00034 34.5 7.0 57 155-230 11-67 (170)
234 PF03437 BtpA: BtpA family; I 54.1 34 0.00074 35.2 6.6 102 134-246 122-235 (254)
235 TIGR02726 phenyl_P_delta pheny 46.8 51 0.0011 31.6 6.2 59 155-234 10-70 (169)
236 COG1634 Uncharacterized Rossma 46.6 94 0.002 31.2 8.0 24 133-157 156-179 (232)
237 COG1623 Predicted nucleic-acid 37.1 4.8E+02 0.01 27.4 11.4 61 100-165 26-89 (349)
238 PF13376 OmdA: Bacteriocin-pro 36.9 49 0.0011 26.0 3.7 35 251-285 7-41 (63)
239 cd01390 HMGB-UBF_HMG-box HMGB- 35.2 93 0.002 24.0 5.1 35 259-293 30-64 (66)
240 COG5470 Uncharacterized conser 34.5 77 0.0017 27.3 4.5 56 517-582 19-76 (96)
241 PF06945 DUF1289: Protein of u 34.2 43 0.00094 25.3 2.8 21 267-287 29-49 (51)
242 PF09011 HMG_box_2: HMG-box do 32.8 1.2E+02 0.0026 24.4 5.4 35 259-293 34-68 (73)
243 PF00505 HMG_box: HMG (high mo 30.4 1.2E+02 0.0026 23.7 5.0 36 260-295 31-66 (69)
244 smart00398 HMG high mobility g 28.0 1.6E+02 0.0036 22.7 5.5 35 260-294 32-66 (70)
245 COG2044 Predicted peroxiredoxi 25.8 1.1E+02 0.0024 27.6 4.4 62 137-221 21-82 (120)
246 PF03740 PdxJ: Pyridoxal phosp 23.8 4.9E+02 0.011 26.5 9.0 99 97-239 112-210 (239)
247 cd01388 SOX-TCF_HMG-box SOX-TC 23.6 1.9E+02 0.0042 23.1 5.1 34 259-292 31-64 (72)
248 PRK05265 pyridoxine 5'-phospha 23.3 6E+02 0.013 25.9 9.4 70 134-231 132-201 (239)
249 COG0434 SgcQ Predicted TIM-bar 22.4 1.8E+02 0.0039 29.6 5.4 47 202-248 192-242 (263)
250 TIGR00620 sporelyase spore pho 21.5 1.6E+02 0.0035 29.1 5.0 60 152-220 26-90 (199)
251 cd00003 PNPsynthase Pyridoxine 21.0 7.2E+02 0.016 25.2 9.5 89 98-232 112-200 (234)
252 TIGR00559 pdxJ pyridoxine 5'-p 20.8 9E+02 0.019 24.6 10.7 90 98-233 112-201 (237)
253 cd00084 HMG-box High Mobility 20.5 2.8E+02 0.0061 21.0 5.4 34 259-292 30-63 (66)
No 1
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=1e-120 Score=1048.93 Aligned_cols=670 Identities=84% Similarity=1.246 Sum_probs=582.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++|++.|++||||+||+.++|+.++++..+...-+.++...+..+.+++++|+||+.++.+|+..|+.+|+++.|
T Consensus 42 l~~~i~~l~~~g~~vvlVsSga~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~qa~aa~Gq~~l~~~~~~~f~~~g~~~~q 121 (718)
T PLN02418 42 LCEQIKELNSDGYEVILVSSGAVGVGRQRLRYRRLVNSSFADLQKPQMELDGKACAAVGQSELMALYDTLFSQLDVTASQ 121 (718)
T ss_pred HHHHHHHHHHCCCEEEEEecchHHHHHHHHhhhhhhhcccccCCCCcchHHHHHHHHhhHHHHHHHHHHHHHHcCCeEEE
Confidence 68899999999999999999999999988887654210011111111134567999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+++|++||.++.++.|..+.|+.||+.|+|||+++||.+++.+..+.+....|+|+|++|+++|.+++||.|+|+|||||
T Consensus 122 illT~~~~~~~~~~~~~~~~l~~ll~~g~iPVv~~nd~v~~~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdG 201 (718)
T PLN02418 122 LLVTDSDFRDPDFRKQLSETVESLLDLRVIPIFNENDAVSTRRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEG 201 (718)
T ss_pred EEecHhHhcchhHhHhHHHHHHHHHHCCCEEEEcCCCCccccccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCe
Confidence 99999999888888888999999999999999999999987532111112246899999999999999999999999999
Q ss_pred cccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 162 LYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 162 Vy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
||++||++|++++|++++..+....+..++.+.+++|||.+|+++|..|.++|++++|+||+.++.|.++++|+..||++
T Consensus 202 vy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~~Kl~Aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i 281 (718)
T PLN02418 202 LYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMTAKVKAAVNAASAGIPVVITSGYALDNIRKVLRGERVGTLF 281 (718)
T ss_pred eecCCCCCCCceEcceecccchhhhhhcccccccCCCCcHHHHHHHHHHHHCCCcEEEeCCCCcchHHHHhcCCCCceEe
Confidence 99999988999999999876654444455556689999999999999999999999999999999999999999999999
Q ss_pred ecCCcccc--chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhh
Q 005798 242 HRDAHLWV--KQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLA 319 (676)
Q Consensus 242 ~~~~~~~~--~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~ 319 (676)
.++.+.|. +.+++++++++|++||+.|+++|..+|.++|++++++|++|+++|++++.+|++.++|+|++..+.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~ 361 (718)
T PLN02418 282 HQDAHLWAPSKEVGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLT 361 (718)
T ss_pred ccccchhhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHh
Confidence 98877765 2246999999999999999999999999999999999999999999999888888888885554444443
Q ss_pred cChHHHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcc
Q 005798 320 LKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKE 399 (676)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~ 399 (676)
.+..|+..++..++++++..++.|+..+......+...+++|+|+|||++|+||||..+.++++|||++||+||+||||.
T Consensus 362 ~~~~ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~ 441 (718)
T PLN02418 362 LKPGKIASLAASIRQLADMEDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKE 441 (718)
T ss_pred ccHHHHHHHHHHHHHHhcCccccCccccccccCCCceEEEEEEeeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCcc
Confidence 44568999999999999875556654331111234456788999999999999999765599999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcccccCcCc----eEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcce
Q 005798 400 AMRSNAILHKVITSAIPDTVGEKL----IGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICH 475 (676)
Q Consensus 400 tp~t~~~l~~l~~~al~~alP~gv----~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p 475 (676)
||+|+..|++++.++ ||+|+ +|+|+|+++++++|..||+||+|+||||+++++++++.+.||++||||||||
T Consensus 442 tp~s~~~l~~l~~eA----lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p 517 (718)
T PLN02418 442 AARSNAILHKVITDA----IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICH 517 (718)
T ss_pred chHHHHHHHHHHHHH----ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcce
Confidence 999999999999873 77775 9999976678899999999999999999999999988778999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHhcCCCCccccccceEEEeCccCChh-HHHHHHHHHHhcCcEEecCccccccccCCCCCcccc
Q 005798 476 VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNG-ALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHH 554 (676)
Q Consensus 476 ~iV~~dADl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~d~~-f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~e 554 (676)
+||++|||+|.|++.+++|+|.|+|+|+|++|+|||++|| |+ .+..+++.+.+.|++++|+++..+++.+++|++++|
T Consensus 518 ~iV~~DADld~A~~~i~~~~~~nGQ~C~a~~RllVh~~i~-d~G~~~~~i~~a~~~Ga~l~Gg~~~~g~l~~~~~~i~~e 596 (718)
T PLN02418 518 VYVDKSADMDMAKRIVVDAKTDYPAACNAMETLLVHKDLV-QNGGLNDLLVALRSAGVTLYGGPRASKLLNIPEAQSFHH 596 (718)
T ss_pred EEEeCCCCHHHHHHHHHHHhCCCCCccccCcEEEEecccc-ccccHHHHHHHHHHCCCEEECCccccCeeCCCCchhhhC
Confidence 9999999999999999999999966999999999999999 68 778888888999998887754323433367899999
Q ss_pred cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCccccccccccc
Q 005798 555 EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRI 634 (676)
Q Consensus 555 E~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~ 634 (676)
|+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+|++++++|+||||+++.+.+..||||+++||+|+|+.
T Consensus 597 E~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~ 676 (718)
T PLN02418 597 EYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRI 676 (718)
T ss_pred CcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999987767778999999999977766
Q ss_pred ccccccchhcceeEEEEEEcCceeecCCCCceeeccccCCCC
Q 005798 635 HARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQS 676 (676)
Q Consensus 635 ~~~g~~g~~~ft~~k~v~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (676)
+++|++|+++||+.|+|.++.++.|+++++.+|+|+.|||||
T Consensus 677 ~~~G~~gl~~~t~~K~v~~g~g~~~~~~~~~~~~~~~~~~~~ 718 (718)
T PLN02418 677 HARGPVGVEGLLTTRWILRGNGQVVDGDKGVVYTHKDLPLQS 718 (718)
T ss_pred CCCCHHHHHHHhcEEEEEECCCeecCCCCCcccccccccCCC
Confidence 667999999999999999999999999999999999999997
No 2
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=6e-117 Score=1020.10 Aligned_cols=673 Identities=75% Similarity=1.110 Sum_probs=580.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|+.|+++|++||||+||+.++|+..+++.................+++++++++||+.++.+|+..|..+++.+.|
T Consensus 34 l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~~~i~~aQ 113 (715)
T TIGR01092 34 ICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPELDGKACAAVGQSGLMALYETMFTQLDITAAQ 113 (715)
T ss_pred HHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCeeEE
Confidence 68899999999999999999999999877765532110000111112245688999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+++|++||.++.++.|..++|+.||+.|+|||+++||.+++.+..+.+....++|+|++|+++|.+|+||.|+|+|||||
T Consensus 114 ~Llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVin~nD~V~~~~~~~~~~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdG 193 (715)
T TIGR01092 114 ILVTDLDFRDEQFRRQLNETVHELLRMNVVPVVNENDAVSTRAAPYSDSQGIFWDNDSLAALLALELKADLLILLSDVEG 193 (715)
T ss_pred EEechhhcccHHHHHHHHHHHHHHHHCCCEEEEcCCCcccccccccccccceecchHHHHHHHHHHcCCCEEEEEeCCCe
Confidence 99999999999998988999999999999999999999988543221111237999999999999999999999999999
Q ss_pred cccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 162 LYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 162 Vy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
||++||++|++++|++++..+..+.+..++.+.+++|||.+|+++|..|.++|++++|+||+.++.|.++++|+..||++
T Consensus 194 Vy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~~ 273 (715)
T TIGR01092 194 LYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVKAAVWAAYGGTPVIIASGTAPKNITKVVEGKKVGTLF 273 (715)
T ss_pred eeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHHHHHHHHHCCCeEEEeCCCCcchHHHHhcCCCCceEe
Confidence 99999988999999999976665445555556688999999999999999999999999999999999999999899999
Q ss_pred ecCCcccc--chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhh
Q 005798 242 HRDAHLWV--KQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLA 319 (676)
Q Consensus 242 ~~~~~~~~--~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~ 319 (676)
..+.+.|. ..++++.++++|++||++|+.+|.++|.++|++++++|++|+++|++++.+|+..+++.+..+..+.++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~~e~gkdl~~a~~~~~~~~~~~el~ 353 (715)
T TIGR01092 274 HEDAHLWPTVEQTGERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEILAENKKDVAAAQGAGYAASLVARLS 353 (715)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCcchhHHHHHh
Confidence 88766543 1135889999999999999999999999999999999999999999999999987776566677778888
Q ss_pred cChHHHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcc
Q 005798 320 LKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKE 399 (676)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~ 399 (676)
.+..++..+++.++++++..++.|...+......+...+.+|+|+|||++|+||||..++++++|||+|||+||+||||.
T Consensus 354 ~~~~ei~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~ 433 (715)
T TIGR01092 354 MSPSKISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKE 433 (715)
T ss_pred CCHHHHHHHHHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCChHHHHHHHHHHHHhCCEEEEcCccc
Confidence 89999999999999999754555554321111223446788999999999999999766799999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEc
Q 005798 400 AMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVD 479 (676)
Q Consensus 400 tp~t~~~l~~l~~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~ 479 (676)
||+|+..+++++.++|.+..|++++|+|+++++++++|..||+||+|+||||+++|+.|+++|.+|+++|||||||+||+
T Consensus 434 tp~t~~~l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~ 513 (715)
T TIGR01092 434 AARSNAILHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVD 513 (715)
T ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEEC
Confidence 99999999999997532223334789998766788999999999999999999999999998889999999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCccccccceEEEeCccCChh-HHHHHHHHHHhcCcEEecCccccccccC--CCCCcccccc
Q 005798 480 KSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNG-ALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEY 556 (676)
Q Consensus 480 ~dADl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~d~~-f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~ 556 (676)
+|||++.|++.+++++|.|+|+|+|++|+|||++|| |+ +++++++.+.+.|++++|+.+...++++ +++++|+||+
T Consensus 514 ~dADl~~A~~~i~~~~~~~GQ~C~a~~rvlV~~~i~-d~~~~~~~v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~ 592 (715)
T TIGR01092 514 KSASVDMAKRIVRDAKCDYPAACNAMETLLVHKDLL-RNGLLDDLIDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEY 592 (715)
T ss_pred CCCCHHHHHHHHHHHhCCCCCccccCcEEEEehhhc-cchhHHHHHHHHHHCCCEEECCcchhheeccCCCCchhhhccc
Confidence 999999999888888887766999999999999999 56 7788888888888888877543333332 4789999999
Q ss_pred cCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCccccccccccccc
Q 005798 557 NSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHA 636 (676)
Q Consensus 557 FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~ 636 (676)
||||++|++|+|+||||+++|+++|||++||||+|.+++++|++++++|+|+||+++...+..||||+++||+|+++.|+
T Consensus 593 FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~ 672 (715)
T TIGR01092 593 SSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHA 672 (715)
T ss_pred cCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999998766777899999999999766667
Q ss_pred ccccchhcceeEEEEEEcCceeecCCCCceeeccccCCC
Q 005798 637 RGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 675 (676)
Q Consensus 637 ~g~~g~~~ft~~k~v~~~~~~~~~~~~~~~~~~~~~~~~ 675 (676)
+|++|+++||+.|+|.++.++.|+++++-+|+|+.||+.
T Consensus 673 ~g~~~l~~~~~~k~v~~g~g~~~~~~~~~~~~~~~~~~~ 711 (715)
T TIGR01092 673 RGPVGVEGLLTTRWLLRGKGQVVSGDHGLVYTHKDLPIP 711 (715)
T ss_pred CChhHHHHhceEEEEEECCCeecCCCCCcceecccCCcc
Confidence 899999999999999999999999999999999999863
No 3
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=1.3e-84 Score=712.75 Aligned_cols=407 Identities=42% Similarity=0.719 Sum_probs=369.9
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHH
Q 005798 252 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 331 (676)
Q Consensus 252 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 331 (676)
.|+++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+++++++|+++++.+++..+..++..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999998888887777888888899999999
Q ss_pred HHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005798 332 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 411 (676)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~ 411 (676)
+++++.+++..|...+....+.+...+++++|+|||++|+||||.+++++++|||+|||+||+||||.||+|+.++++++
T Consensus 84 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~ 163 (417)
T PRK00197 84 LRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVI 163 (417)
T ss_pred HHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHH
Confidence 99998766555543322111223357889999999999999988888999999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEEecC-C-ChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHHHH
Q 005798 412 TSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 488 (676)
Q Consensus 412 ~~al~~a-lP~gv~~~v~~-~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~ 488 (676)
.+++.++ +|+|+||+|++ + ++++++|..||+||+|+||||+++|+.|++.+.||+++|||||||+||++|||+|.|+
T Consensus 164 ~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~Aa 243 (417)
T PRK00197 164 QEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKAL 243 (417)
T ss_pred HHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHH
Confidence 9888889 99999999994 4 4578999999999999999999999999998899999999999999999999999999
Q ss_pred HHHHHhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCcccccccc-C--CCCCcccccccCceEEEEE
Q 005798 489 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I--PETRLFHHEYNSMVCTVEI 565 (676)
Q Consensus 489 ~~iv~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v--~~~~~~~eE~FGPVl~i~~ 565 (676)
+.+++|+|.|+|+|+|++|+|||++|| |+|+++|+++++++++.+.|++...+++| | ++|++++||+||||++|++
T Consensus 244 ~~iv~~~~~n~G~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FGPVl~v~~ 322 (417)
T PRK00197 244 KIVLNAKTQRPSVCNALETLLVHEAIA-EEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILAVKV 322 (417)
T ss_pred HHHHHhccCCCcccccceEEEEEHHHh-HHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhCceEEEEE
Confidence 999999999988999999999999999 79999999999999988776654334568 4 5789999999999999999
Q ss_pred eCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcc
Q 005798 566 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 645 (676)
Q Consensus 566 ~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 645 (676)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+..|||++++||+|.++.+++|++|+++|
T Consensus 323 ~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~ 402 (417)
T PRK00197 323 VDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEEL 402 (417)
T ss_pred eCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhh
Confidence 99999999999999999999999999999999999999999999998776777899999999998666678899999999
Q ss_pred eeEEEEEEcCceee
Q 005798 646 LTTRWILRGNGHVV 659 (676)
Q Consensus 646 t~~k~v~~~~~~~~ 659 (676)
|++|+++++.+++|
T Consensus 403 ~~~k~v~~~~~~~~ 416 (417)
T PRK00197 403 TTYKYIVLGDGQIR 416 (417)
T ss_pred cEEEEEEECCCeeC
Confidence 99999999988876
No 4
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=2.7e-83 Score=700.12 Aligned_cols=398 Identities=45% Similarity=0.760 Sum_probs=358.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHH
Q 005798 256 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 335 (676)
Q Consensus 256 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (676)
+.+++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|+++++++|++++..+++..+..+++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999998988877778888888999999999999
Q ss_pred hcccccccccccccccCCCcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhc
Q 005798 336 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 415 (676)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al 415 (676)
+...+..|...+......+...+++|+|+|||++|+||||.+++++++|||+|||+||+||||.||+++..+++++.++|
T Consensus 82 a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l 161 (406)
T cd07079 82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161 (406)
T ss_pred HhcCCCCcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHH
Confidence 86655444433221112233567889999999999999888888999999999999999999999999999999999888
Q ss_pred ccc-cCcCceEEecC-C-ChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHHHHHHHH
Q 005798 416 PDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 492 (676)
Q Consensus 416 ~~a-lP~gv~~~v~~-~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv 492 (676)
.++ +|+|++|+|++ + +.++++|.+||+||+|+||||+++|+.|+++|.+|+++|||||||+||++|||+|.|++.++
T Consensus 162 ~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~ 241 (406)
T cd07079 162 EEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVV 241 (406)
T ss_pred HHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHH
Confidence 889 99999999995 4 36789999999999999999999999999888999999999999999999999999999999
Q ss_pred HhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccc-c-C-CCCCcccccccCceEEEEEeCCH
Q 005798 493 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-Q-I-PETRLFHHEYNSMVCTVEIVDDV 569 (676)
Q Consensus 493 ~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~-p-v-~~~~~~~eE~FGPVl~i~~~~~~ 569 (676)
+|+|.|+|+|+|++|+|||++|| |+|+++|+++++++|+++.|+.+...++ | + ++|++++||+||||++|++|+|+
T Consensus 242 ~~~f~n~G~C~a~~rv~V~~si~-d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~~ 320 (406)
T cd07079 242 NAKTQRPSVCNALETLLVHRDIA-EEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320 (406)
T ss_pred HcccCCCcccccceeEEEeHHHH-HHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeEEEEeCCH
Confidence 99999988999999999999999 7999999999999999887665433344 4 4 57999999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEE
Q 005798 570 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 570 deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+..|||++++||+|+|.++++|++|+++||+.|
T Consensus 321 deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k 400 (406)
T cd07079 321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYK 400 (406)
T ss_pred HHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEE
Confidence 99999999999999999999999999999999999999999987766778999999999976556778999999999999
Q ss_pred EEEEc
Q 005798 650 WILRG 654 (676)
Q Consensus 650 ~v~~~ 654 (676)
++.++
T Consensus 401 ~i~~~ 405 (406)
T cd07079 401 YIVRG 405 (406)
T ss_pred EEEeC
Confidence 99764
No 5
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.3e-81 Score=631.67 Aligned_cols=399 Identities=16% Similarity=0.180 Sum_probs=349.7
Q ss_pred HHHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 228 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 228 i~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
+.+|.+|+.+|.+.... -.+.+.|+++|.+||.+|++++..||.++|+++.++|.+|+++|+++++.|-+|+
T Consensus 43 V~nPa~geii~~V~~~~------V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKp-- 114 (503)
T KOG2451|consen 43 VDNPANGEIIGKVADMT------VEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKP-- 114 (503)
T ss_pred ccCCCccchhhcccCCc------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCc--
Confidence 35678888888876666 6689999999999999999999999999999999999999999999988654433
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
+..+..|+.+.+..++||++.++ ..|...++. .+.....+.++|+||+++|+|| ||. +..+|+++
T Consensus 115 ----------L~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~--~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 115 ----------LGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSL--NPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred ----------hhhccceeehhHHHHHHHHHHhhhhhccccCCC--CCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 22234688889999999997765 457766532 3456778899999999999999 585 66799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC----CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS----REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 459 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~----~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 459 (676)
||++|||||+|||++||++++.++++-.+ | +|+|++|+|++ ..+.+..|..+|.|++|+|||||.+||.++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~----AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEE----AGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHH----cCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 99999999999999999999999999876 8 99999999982 346889999999999999999999999999
Q ss_pred HhcC---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---
Q 005798 460 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 532 (676)
Q Consensus 460 ~~a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 532 (676)
+++. |++.||||||.|+||++|||||+|++..+..+|.|+| +|.+++|+|||++|| |+|+++|.++++++.+
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iy-D~Fv~~l~e~vkkl~vGdG 337 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIY-DKFVSKLAEAVKKLKVGDG 337 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhH-HHHHHHHHHHHHheeccCC
Confidence 8773 9999999999999999999999999999999999988 999999999999999 7999999999998632
Q ss_pred -------------------------------E-EecCccc---c-ccc-c-C-----CCCCcccccccCceEEEEEeCCH
Q 005798 533 -------------------------------G-LFGGPRA---S-KLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 569 (676)
Q Consensus 533 -------------------------------~-~~g~~~~---~-~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~ 569 (676)
+ ++||.+. . .+| | | ++|-+..||+|||+.+|++|+|+
T Consensus 338 ~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte 417 (503)
T KOG2451|consen 338 LDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE 417 (503)
T ss_pred CCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH
Confidence 1 1344321 1 133 5 2 36888999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEE
Q 005798 570 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 570 deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
||+|+.|||++.||++|+||+|..+..|++++|++|+|.+|.........||||.++||+| ++++.+|+++|+..|
T Consensus 418 eEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~G----REgskyGidey~~ik 493 (503)
T KOG2451|consen 418 EEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFG----REGSKYGIDEYLVIK 493 (503)
T ss_pred HHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccC----ccccccchhhhhhhh
Confidence 9999999999999999999999999999999999999999998888888999999999997 467899999999999
Q ss_pred EEEEcC
Q 005798 650 WILRGN 655 (676)
Q Consensus 650 ~v~~~~ 655 (676)
++++..
T Consensus 494 ~icig~ 499 (503)
T KOG2451|consen 494 YICIGT 499 (503)
T ss_pred eeeecC
Confidence 998854
No 6
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=8.7e-82 Score=664.75 Aligned_cols=399 Identities=17% Similarity=0.210 Sum_probs=351.2
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
++.+|+.+.++...+ .+||++++++||+||+ .|++++..+|.++|+++|+++++++++|+...+.|-+++
T Consensus 42 nP~tg~~i~~v~~~~------~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp-- 113 (501)
T KOG2450|consen 42 NPATGEVIAKVAEAT------EEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKP-- 113 (501)
T ss_pred cCCCCCeEEEecccc------HHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCc--
Confidence 456788888887777 8899999999999999 699999999999999999999999999998766554332
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCCC-hh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~-~~~~~~~~ 384 (676)
+.+++ ..++...++.+++++.+++.. +...+. ..+...|++++|+|||+.|+||| |. +..||++|
T Consensus 114 --~~~a~-------~~Dl~~~~~~~ry~ag~ad~~~~~~~~~---~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaP 181 (501)
T KOG2450|consen 114 --YPEAL-------VSDLPPAIDCFRYYAGWADKIHGSTIPT---DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAP 181 (501)
T ss_pred --chhhh-------hcCchhhhhHHHhhccchhhcccccCCC---CCceEEEecCCcceeeeEeccCchHHHHHHHhhhh
Confidence 12222 146888999999999988654 544332 34567899999999999999995 96 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+||||+||+|+..+++++.+ + +|+||+|+|+| +.++++.|.+||+|++|+||||+.+|+.|++++
T Consensus 182 ALa~GNtvV~Kpae~tplsal~~~~l~~e----aG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aa 257 (501)
T KOG2450|consen 182 ALAAGNTVVLKPAEQTPLTALYLASLCKE----AGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAA 257 (501)
T ss_pred HHhhCcEEEecCCCCCCchHHHHHHHhHH----hcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhh
Confidence 99999999999999999999999999987 8 99999999996 888999999999999999999999999999987
Q ss_pred C----CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHh-cCc----
Q 005798 463 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV---- 532 (676)
Q Consensus 463 ~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~~---- 532 (676)
+ ||++||||||+|.||++|||+|.|++.+..+.|+|.| +|++.+|+|||++|| |+|++++++++++ +.+
T Consensus 258 a~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iy-defv~~~v~~a~~~~kvGdP~ 336 (501)
T KOG2450|consen 258 AESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIY-DEFVEKFVAAAKKKLKVGDPF 336 (501)
T ss_pred hhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHH-HHHHHHHHHHHhcccccCCCC
Confidence 3 9999999999999999999999999999999999988 999999999999999 7999999999865 422
Q ss_pred ------------------------------EE-ecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 ------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 ------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +||.+. .++| | | ++|+|++||+||||++|++|++.||
T Consensus 337 ~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE 416 (501)
T KOG2450|consen 337 DEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEE 416 (501)
T ss_pred CcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHH
Confidence 22 344332 2344 5 2 4799999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
+|++||++.|||+++|||+|.++++++++++++|+||||+........||||.++||+| ++.|.+++++||+.|+|
T Consensus 417 ~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~G----RE~g~~~l~~ytevKtv 492 (501)
T KOG2450|consen 417 VIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIG----RELGEYGLEAYTEVKTV 492 (501)
T ss_pred HHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCC----ccccHHHHhhcceeeEE
Confidence 99999999999999999999999999999999999999999988889999999999987 46799999999999999
Q ss_pred EEcCce
Q 005798 652 LRGNGH 657 (676)
Q Consensus 652 ~~~~~~ 657 (676)
+++.++
T Consensus 493 ~v~~~~ 498 (501)
T KOG2450|consen 493 TVKLPQ 498 (501)
T ss_pred EEeCCC
Confidence 987653
No 7
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=8.4e-79 Score=672.14 Aligned_cols=397 Identities=22% Similarity=0.228 Sum_probs=340.5
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+|+.++++...+ .+++++|+++|++||+.|+++|+.+|.++|++++++|++|+++|+++++.|.+++.
T Consensus 19 ~nP~tg~~i~~~~~a~------~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i-- 90 (472)
T COG1012 19 INPATGEVIATVPAAT------AEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPI-- 90 (472)
T ss_pred eCCCCCCEEeeecCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 4477888899988877 77999999999999999999999999999999999999999999999887764431
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
.++ ..++..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++||
T Consensus 91 --~ea--------~~ei~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apA 157 (472)
T COG1012 91 --SEA--------RGEIARAADFIRYYAEEARRLEGETIPT---DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPA 157 (472)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCCccCC---CCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHH
Confidence 222 23477777888887765542 2332221 1145678999999999999999 596 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 462 (676)
|++||+||+|||+.||+|+..+++++.+ + +|+|+||+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 158 LaaGntVV~KPse~tp~sa~~l~~~~~~----aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa 233 (472)
T COG1012 158 LAAGNTVVLKPSEQTPLSALALAELAAE----AGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233 (472)
T ss_pred HHcCCEEEEECcccCcHHHHHHHHHHHH----hCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh
Confidence 9999999999999999999999999986 6 99999999995 566889999999999999999999999999987
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHh-cCc------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV------ 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~~------ 532 (676)
.||++||||||||+||++|||+|.|++.+++|+|.|+| +|+|.+|+|||+++| |+|+++|.++ ++ +.+
T Consensus 234 ~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~-d~f~~~l~~~-~~~l~~Gd~~d~ 311 (472)
T COG1012 234 ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVY-DEFVERLVAR-AASLKVGDPLDP 311 (472)
T ss_pred hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhH-HHHHHHHHHH-HhcCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 7999999999 66 111
Q ss_pred ----------------------------EE-ecCccccccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 533 ----------------------------GL-FGGPRASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 533 ----------------------------~~-~g~~~~~~~~--p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
.+ .|+.+..++| | | ++|++++||+||||++|++|+|+||||++
T Consensus 312 ~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 312 STDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 11 2332222333 5 2 47899999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCC--CCCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+|+++|||+++|||+|..++.++++++++|+|+||+... .....||||.+.||+| +++|.+++++|++.|++..
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G----~~~g~~~~~~~~~~k~v~~ 467 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG----REGGKYGLEEFTEVKTVTI 467 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhcceEEEE
Confidence 999999999999999999999999999999999998753 3466899999999987 3568999999999999987
Q ss_pred cCc
Q 005798 654 GNG 656 (676)
Q Consensus 654 ~~~ 656 (676)
...
T Consensus 468 ~~~ 470 (472)
T COG1012 468 KLG 470 (472)
T ss_pred ecC
Confidence 643
No 8
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=2.5e-78 Score=655.53 Aligned_cols=388 Identities=44% Similarity=0.733 Sum_probs=345.3
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhcccc
Q 005798 261 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE 340 (676)
Q Consensus 261 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (676)
|++||+.|+++|.++|.++|++++++|++|+++|+++++.|+..++|+|++..+.+++..+..++..+++.++++++.++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 58899999999999999999999999999999999998888888889998865555556667899999999999998776
Q ss_pred cccccccccccCCCcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-c
Q 005798 341 PIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-V 419 (676)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-l 419 (676)
..|+..+.....++...+++|+|+|||++|+||||++++++++|||++||+||+||||.||+|+..+++++++++.++ +
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGl 160 (398)
T TIGR00407 81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160 (398)
T ss_pred CCcccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 656443321112355678899999999999999988888999999999999999999999999999999999888889 9
Q ss_pred CcCceEEecC-C-ChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCC
Q 005798 420 GEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKID 497 (676)
Q Consensus 420 P~gv~~~v~~-~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~ 497 (676)
|+|+||+|++ + ++++++|..||+||+|+||||+.+|+.+++.+.+|+++|||||||+||++|||+|.|++.+++|+|.
T Consensus 161 P~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~ 240 (398)
T TIGR00407 161 PVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ 240 (398)
T ss_pred ChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC
Confidence 9999999995 4 4578999999999999999999999999988789999999999999999999999999999999998
Q ss_pred CCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccc----c-C--CCCCcccccccCceEEEEEeCCHH
Q 005798 498 YPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----Q-I--PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 498 n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~----p-v--~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
|+|+|+|++|+|||++|| |+|+++|+++++++++.+........++ | + .++++++||+||||++|++|+|+|
T Consensus 241 ~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~ 319 (398)
T TIGR00407 241 RPSTCNAIETLLVNKAIA-REFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLE 319 (398)
T ss_pred CCCcccccceEEEeHHHH-HHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEEEEECCHH
Confidence 766999999999999999 7999999999998876542211111122 1 2 257899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
|||+++|+++|||++||||+|.+++++|++++++|+|+||+++.+.++.|||.|.+.|+|+++.|.+|+.+++.||+.|
T Consensus 320 eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999999999999999999999999999999999999998888889999999999999999999999999999876
No 9
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=2.1e-77 Score=666.21 Aligned_cols=397 Identities=17% Similarity=0.168 Sum_probs=340.8
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 31 ~nP~tg~~v~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 103 (482)
T PRK11241 31 TNPANGDKLGSVPKMG------ADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLA- 103 (482)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 3467899999988877 889999999999999999999999999999999999999999999988776544321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+..+++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 104 ---~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (482)
T PRK11241 104 ---EA--------KGEISYAASFIEWFAEEGKRIYGDTIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 170 (482)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHH
Confidence 11 24677778888877654332 23322211 1233457889999999999999 585 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 462 (676)
|++||+||+||||.||+++..+++++.+ + +|+|+||+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 171 LaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa 246 (482)
T PRK11241 171 LAAGCTMVLKPASQTPFSALALAELAIR----AGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246 (482)
T ss_pred HHhCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 566788888999999999999999999999887
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
.+|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 325 (482)
T PRK11241 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY-DRFAEKLQQAVSKLHIGDGLEKG 325 (482)
T ss_pred hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHH-HHHHHHHHHHHhhCCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 005798 533 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 574 (676)
Q Consensus 533 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~ 574 (676)
++ +|+... .+ |+ | | ++|++++||+||||++|++|+|+||||+
T Consensus 326 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~ 405 (482)
T PRK11241 326 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIA 405 (482)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHH
Confidence 22 244321 23 33 6 2 4689999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEEc
Q 005798 575 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 575 ~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 654 (676)
++|+++|||++||||+|.++++++++++++|+||||+.....+..||||.|.||+| +++|.+|+++||+.|++++.
T Consensus 406 ~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 406 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLG----REGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccC----cccHHHHHHHhhcceEEEEe
Confidence 99999999999999999999999999999999999987665567899999999986 35699999999999998764
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=7.2e-77 Score=667.36 Aligned_cols=399 Identities=17% Similarity=0.196 Sum_probs=338.4
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+|+.++++..++ .+|+++|+++|++||+.|+.+|.++|.++|++++++|++|+++|++++.+|+||+..
T Consensus 134 ~nP~tg~~i~~v~~a~------~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~- 206 (604)
T PLN02419 134 INPATQEVVSKVPLTT------NEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLK- 206 (604)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 4577889999988888 889999999999999999999999999999999999999999999998877655421
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+..+++.++++++..+ ..++..+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 207 ---ea--------~~EV~~~i~~~~~~a~~a~~~~g~~~~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapA 273 (604)
T PLN02419 207 ---DS--------HGDIFRGLEVVEHACGMATLQMGEYLPNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVA 273 (604)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhhCCccccc--CCCccceEEecCccEEEEECCCccHHHHHHHHHHHH
Confidence 22 2366677777777665432 223222210 1233457889999999999999 585 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.||+++..+++++.+ + ||+|+||+|+|..++++.|..||+||+|+||||+++|+.|+++|
T Consensus 274 LaAGNtVVlKPSe~tp~ta~~l~~l~~e----AGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~ 349 (604)
T PLN02419 274 VTCGNTFILKPSEKDPGASVILAELAME----AGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349 (604)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHH----hCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc
Confidence 9999999999999999999999999986 7 99999999997445777788899999999999999999999876
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|++||||||||+||++|||||.|++.+++|+|.|+| +|+|++|||||++ | |+|+++|+++++++.+
T Consensus 350 ~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~-d~f~e~l~~~~~~l~vG~p~d~~t 427 (604)
T PLN02419 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-A-KSWEDKLVERAKALKVTCGSEPDA 427 (604)
T ss_pred cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-H-HHHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999987 9999999999999 9 7999999999886521
Q ss_pred --------------------------EE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+.+. .+ |+ | | ++|.+++||+||||++|++|+|+||
T Consensus 428 ~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dE 507 (604)
T PLN02419 428 DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDE 507 (604)
T ss_pred CccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHH
Confidence 22 244321 13 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+.+||||.+.||+|. .+++|.+|+++|++.|+
T Consensus 508 AI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~--~~~~G~~gl~~ft~~K~ 585 (604)
T PLN02419 508 AISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGD--LNFYGKAGVDFFTQIKL 585 (604)
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCC--CcccHHHHHHHhhCeEE
Confidence 99999999999999999999999999999999999999987433 4678999999999862 12469999999999999
Q ss_pred EEEcC
Q 005798 651 ILRGN 655 (676)
Q Consensus 651 v~~~~ 655 (676)
|+++.
T Consensus 586 v~~~~ 590 (604)
T PLN02419 586 VTQKQ 590 (604)
T ss_pred EEEcc
Confidence 98764
No 11
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=1.2e-76 Score=655.23 Aligned_cols=386 Identities=19% Similarity=0.206 Sum_probs=322.2
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
..|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++
T Consensus 9 ~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~----~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 9 AADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL----ESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 569999999999999999999999999999999999999999999999988766531 2322233334456666666
Q ss_pred HHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005798 331 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 408 (676)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 408 (676)
.++.+.+... ..... . ..+...++.|+|+|||++|+|| ||. +.+++++|||+|||+||+||||.||+|+..++
T Consensus 85 ~~~~~~~~~~---~~~~~-~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~ 159 (484)
T PLN02174 85 QLKNWMAPEK---AKTSL-T-TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLA 159 (484)
T ss_pred HHHHHhcccc---ccccc-c-cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence 6665433111 01111 0 1123467889999999999999 585 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcCCCCHH
Q 005798 409 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 485 (676)
Q Consensus 409 ~l~~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~ 485 (676)
+++.+ ++|+|+||+|+|+.+.+..|.+ |+||+|+||||+++|+.|++.| .+|++||||||||+||++|||+|
T Consensus 160 ~l~~~----~lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~ 234 (484)
T PLN02174 160 KLLEQ----YLDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLK 234 (484)
T ss_pred HHHHH----hCCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHH
Confidence 99985 4999999999964334444554 7899999999999999999877 39999999999999999999999
Q ss_pred HHHHHHHHhcC-CCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------------------------------
Q 005798 486 VAKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------- 532 (676)
Q Consensus 486 ~A~~~iv~~~~-~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------- 532 (676)
.|++.+++|+| .|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 235 ~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~g 313 (484)
T PLN02174 235 VTVRRIIAGKWGCNNGQACISPDYILTTKEYA-PKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVS 313 (484)
T ss_pred HHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHH-HHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcC
Confidence 99999999999 5877 999999999999999 7999999998876521
Q ss_pred -EE-ecCccc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhc
Q 005798 533 -GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 601 (676)
Q Consensus 533 -~~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~ 601 (676)
++ +||... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus 314 a~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~ 393 (484)
T PLN02174 314 DKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAAT 393 (484)
T ss_pred CEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHc
Confidence 22 344322 13 33 5 2 4689999999999999999999999999999999999999999999999999999
Q ss_pred cCeeeEEEcCCCCCC--CCCcccCcccccccccccccccccchhcceeEEEEEEcC
Q 005798 602 VDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 602 l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 655 (676)
+++|+|+||++.... +..||||.+.||+| +++|.+|+++||+.|+|.++.
T Consensus 394 l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~G----r~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 394 VSAGGIVVNDIAVHLALHTLPFGGVGESGMG----AYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred CCcceEEECCCcCCCCCCCCCCCCcCccccC----ccchHHHHHHhcceEEEEECC
Confidence 999999999876543 56899999999986 357999999999999998764
No 12
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=7.4e-76 Score=653.34 Aligned_cols=397 Identities=14% Similarity=0.151 Sum_probs=337.6
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++..
T Consensus 21 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 93 (472)
T TIGR03374 21 YNPATGEVILEIAEAS------AEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLH- 93 (472)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 4567889999988888 889999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++. ..|+...++.+++++...+. .+...+.. ..+...++.|+|+|||++|+|| ||. +.+++++||
T Consensus 94 ---~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 161 (472)
T TIGR03374 94 ---SVF-------NDEIPAIVDVFRFFAGAARCLSGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 161 (472)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHHHH
Confidence 111 12555666666666543321 12211111 1233567889999999999999 585 578999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.+|+++..+++++.+ +||+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++++
T Consensus 162 LaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 237 (472)
T TIGR03374 162 LAAGNCVVLKPSEITPLTALKLAELAKD----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP 237 (472)
T ss_pred HhcCCEEEecCCCCCCHHHHHHHHHHHH----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999999999975 499999999996 667888899999999999999999999999877
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.||++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 238 SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY-DTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 7999999999887521
Q ss_pred ---------------------------EE-ecCccc--ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 005798 533 ---------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 574 (676)
Q Consensus 533 ---------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~ 574 (676)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+||||+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 396 (472)
T TIGR03374 317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVN 396 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHH
Confidence 12 233321 133 3 5 2 4689999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 575 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 575 ~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|++++
T Consensus 397 ~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 397 WANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYG----KDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccC----ccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999988776778999999999986 3569999999999999875
No 13
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=3.1e-75 Score=651.43 Aligned_cols=402 Identities=16% Similarity=0.206 Sum_probs=341.1
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++|+..
T Consensus 39 ~nP~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~- 111 (508)
T PLN02315 39 VNPANNQPIAEVVEAS------LEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILA- 111 (508)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH-
Confidence 4677899999988777 889999999999999999999999999999999999999999999998877655421
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+...++.++++++..+. .+...+. . ..+...+..|+|+|||++|+|| ||. +.+++++||
T Consensus 112 ---~a--------~~ev~~~i~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 178 (508)
T PLN02315 112 ---EG--------IGEVQEIIDMCDFAVGLSRQLNGSIIPS-E-RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIA 178 (508)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC-C-CCCceeEEEEecceEEEEECCCcchHHHHHHHHhHH
Confidence 21 23566666777766643321 2222221 1 1223446789999999999998 595 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+||||.||+++..+++++.+++.++ +|+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 179 LaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~ 258 (508)
T PLN02315 179 LVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNA 258 (508)
T ss_pred HHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999888888877789 99999999998666788899999999999999999999999866
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 259 ~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~vG~p~~~~~ 337 (508)
T PLN02315 259 RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIY-DDVLEQLLTVYKQVKIGDPLEKGT 337 (508)
T ss_pred cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999977 999999999999999 7999999999987632
Q ss_pred --------------------------EE-ecCccc--cc-cc-c-C----CCCCcccccccCceEEEEEeCCHHHHHHHH
Q 005798 533 --------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 576 (676)
Q Consensus 533 --------------------------~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~i~~~~~~deAi~~a 576 (676)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 338 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~a 417 (508)
T PLN02315 338 LLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEIN 417 (508)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHH
Confidence 12 233321 12 33 5 2 478999999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHh--ccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 577 HQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 577 N~~~~GL~a~vft~d~~~a~~~~~--~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
|+++|||++||||+|.++++++++ ++++|+||||+++.. .+.+||||.+.||+| +++|.+|+++||+.|+|++
T Consensus 418 N~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~~ 493 (508)
T PLN02315 418 NSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCTI 493 (508)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC----ccchHHHHHHHhhEEEEEE
Confidence 999999999999999999999984 799999999986544 467899999999986 3568999999999999987
Q ss_pred cC
Q 005798 654 GN 655 (676)
Q Consensus 654 ~~ 655 (676)
.+
T Consensus 494 ~~ 495 (508)
T PLN02315 494 NY 495 (508)
T ss_pred ec
Confidence 64
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=4.7e-75 Score=650.90 Aligned_cols=398 Identities=18% Similarity=0.192 Sum_probs=339.0
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
.+|.+|+.++++...+ .+|+++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|++++.
T Consensus 41 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 114 (501)
T PLN02766 41 RDPRTGEVIARIAEGD------KEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLF 114 (501)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 5677899999988877 8899999999999997 5999999999999999999999999999999887765432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
. ++. ..|+...++.+++++...+ ..|+..+. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 115 ~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 180 (501)
T PLN02766 115 A----LGK-------AVDIPAAAGLLRYYAGAADKIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVA 180 (501)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHHH
Confidence 1 111 1255666667776664332 22332211 1233457889999999999999 595 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
|||++||+||+||||.||+++.++++++.+ + ||+|+||+|+| +.++++.|..||+||+|+||||+++|+.|++.
T Consensus 181 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~ 256 (501)
T PLN02766 181 PALAAGCTMVVKPAEQTPLSALFYAHLAKL----AGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256 (501)
T ss_pred HHHHcCCEEEEeCCCCchHHHHHHHHHHHh----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56788889999999999999999999999986
Q ss_pred cC----CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----
Q 005798 462 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 532 (676)
Q Consensus 462 a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 532 (676)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 257 aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~-d~f~~~l~~~~~~l~~G~p~ 335 (501)
T PLN02766 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIY-DEFVKKLVEKAKDWVVGDPF 335 (501)
T ss_pred hhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCCC
Confidence 63 8999999999999999999999999999999999977 999999999999999 7999999998876521
Q ss_pred ------------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||
T Consensus 336 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~de 415 (501)
T PLN02766 336 DPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEE 415 (501)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHH
Confidence 22 244321 23 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.|.||+| +++|++|+++||+.|++
T Consensus 416 ai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v 491 (501)
T PLN02766 416 AIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFG----RDQGMDALDKYLQVKSV 491 (501)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceEEE
Confidence 99999999999999999999999999999999999999987766677899999999986 35699999999999999
Q ss_pred EEcC
Q 005798 652 LRGN 655 (676)
Q Consensus 652 ~~~~ 655 (676)
++..
T Consensus 492 ~~~~ 495 (501)
T PLN02766 492 VTPL 495 (501)
T ss_pred EEec
Confidence 8753
No 15
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-74 Score=642.08 Aligned_cols=395 Identities=16% Similarity=0.219 Sum_probs=333.8
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|.+++..
T Consensus 12 ~nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 84 (462)
T PRK13968 12 VNPATGEQLSVLPWAG------ADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN- 84 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH-
Confidence 3577899999988888 889999999999999999999999999999999999999999999998877655431
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++. .|+...++.+++++...+. .+..... ..+...+++++|+|||++|+|| ||. +.+++++||
T Consensus 85 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~A 150 (462)
T PRK13968 85 ---QAR--------AEVAKSANLCDWYAEHGPAMLKAEPTL---VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPI 150 (462)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhhCCcccc---CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHH
Confidence 221 2455566666655543211 1111110 1234567889999999999999 585 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 462 (676)
|++||+||+||||.||+++..+++++.+ + +|+|++|+|++ ++..+. +..||+||+|+||||+++|+.|++.+
T Consensus 151 LaaGN~vv~KPs~~tp~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~-l~~~~~v~~V~fTGs~~~G~~i~~~aa 225 (462)
T PRK13968 151 LLAGNGYLLKHAPNVMGCAQLIAQVFKD----AGIPQGVYGWLNADNDGVSQ-MINDSRIAAVTVTGSVRAGAAIGAQAG 225 (462)
T ss_pred HHcCCEEEEECCCcChHHHHHHHHHHHH----cCcCcCcEEEEecCchhhHH-HhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 444444 66789999999999999999999887
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 226 ~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 304 (462)
T PRK13968 226 AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIA-SAFTERFVAAAAALKMGDPRDEE 304 (462)
T ss_pred hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 49999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 005798 533 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 574 (676)
Q Consensus 533 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~ 574 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 305 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~ 384 (462)
T PRK13968 305 NALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALE 384 (462)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHH
Confidence 12 244321 12 33 5 2 3688999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEEc
Q 005798 575 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 575 ~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 654 (676)
++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|++|+++||+.|+|.+.
T Consensus 385 ~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 385 LANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFG----RELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred HHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----cCchHHHHHHhcceeEEEEe
Confidence 99999999999999999999999999999999999988766677899999999886 35799999999999999764
No 16
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.6e-74 Score=640.70 Aligned_cols=398 Identities=19% Similarity=0.199 Sum_probs=333.0
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|++++..
T Consensus 6 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 78 (457)
T PRK09406 6 INPATGETVKTFTALT------DDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLA- 78 (457)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHH-
Confidence 3467899999988888 889999999999999999999999999999999999999999999998877655431
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++. .|+...++.++++++..+. .+..........+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 79 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~A 147 (457)
T PRK09406 79 ---SAK--------AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPA 147 (457)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHH
Confidence 221 2445555555555432211 11110000001223567889999999999999 585 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 463 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 463 (676)
|++||+||+|||+.+|+++..+++++.+ + ||+|+||+|+++...+..|..||+|++|+||||+++|+.|++.++
T Consensus 148 LaaGN~VV~Kps~~~p~~~~~l~~l~~~----aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~ 223 (457)
T PRK09406 148 LMAGNVGLLKHASNVPQTALYLADLFRR----AGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD 223 (457)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 999999999844334556678999999999999999999988773
Q ss_pred --CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 464 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 464 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 224 ~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 302 (457)
T PRK09406 224 EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVY-DAFAEKFVARMAALRVGDPTDPDT 302 (457)
T ss_pred cCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred --------------------------EE-ecCccc--ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 533 --------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 533 --------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
++ +|+... .++ + | | ++|.+++||+||||++|++|+|+||||++
T Consensus 303 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 382 (457)
T PRK09406 303 DVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEI 382 (457)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHH
Confidence 11 244321 133 3 5 2 35789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+|+++|||++||||+|.+++.++++++++|+|+||+++...+..||||.+.||+| +++|.+|+++||+.|+|++
T Consensus 383 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 383 ANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYG----RELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceEEEEe
Confidence 9999999999999999999999999999999999998777777999999999886 3568999999999999875
No 17
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=1.4e-74 Score=645.10 Aligned_cols=402 Identities=18% Similarity=0.211 Sum_probs=338.4
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 17 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 89 (474)
T cd07130 17 ISPANGEPIARVRQAT------PEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILP- 89 (474)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-
Confidence 4577889899988877 889999999999999999999999999999999999999999999988776654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+..+++.+++++...+.. +...+. ...+...+..++|+|||++|+|| ||. +.++++++|
T Consensus 90 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 90 ---EG--------LGEVQEMIDICDFAVGLSRQLYGLTIPS--ERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCccccC--CCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 22 124555556666555432221 222211 11233456789999999999998 595 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.||+++.++++++.+++.++ +|+|++|+|+|+.++++.|.+||+||+|+||||+++|+.|++.+
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~ 236 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA 236 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHh
Confidence 999999999999999999999999999888889 99999999997555788888999999999999999999999876
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 315 (474)
T cd07130 237 RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIY-DEVLERLKKAYKQVRIGDPLDDGT 315 (474)
T ss_pred cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred --------------------------EE-ecCccc--cc-cc-c-C----CCCCcccccccCceEEEEEeCCHHHHHHHH
Q 005798 533 --------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 576 (676)
Q Consensus 533 --------------------------~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~i~~~~~~deAi~~a 576 (676)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 316 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 395 (474)
T cd07130 316 LVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWN 395 (474)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 12 233321 12 33 5 2 348899999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHhc--cCeeeEEEcCCCC-CCCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 577 HQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 577 N~~~~GL~a~vft~d~~~a~~~~~~--l~~G~v~iN~~~~-~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
|+++|||++||||+|.+++++++++ +++|+|+||.++. ..+.+||||.|.||+| +++|++|+++|++.|++.+
T Consensus 396 N~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~k~~~~ 471 (474)
T cd07130 396 NEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRSTCTI 471 (474)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCC----ccchHHHHHHHhheEEEEE
Confidence 9999999999999999999999986 9999999998654 3467899999999986 3569999999999999887
Q ss_pred cC
Q 005798 654 GN 655 (676)
Q Consensus 654 ~~ 655 (676)
.+
T Consensus 472 ~~ 473 (474)
T cd07130 472 NY 473 (474)
T ss_pred ec
Confidence 53
No 18
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=2.1e-74 Score=645.73 Aligned_cols=398 Identities=16% Similarity=0.179 Sum_probs=339.5
Q ss_pred HHHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 228 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 228 i~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
+.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++..
T Consensus 44 v~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 117 (498)
T PLN02278 44 VYNPATGEVIANVPCMG------RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLK 117 (498)
T ss_pred EECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 35788899999987777 789999999999999999999999999999999999999999999998877654421
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..|+..+++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 118 ----~a--------~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ 183 (498)
T PLN02278 118 ----EA--------IGEVAYGASFLEYFAEEAKRVYGDIIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGP 183 (498)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHHHH
Confidence 22 13566667777766644322 23222211 1233457789999999999999 585 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|+| ++++++.|..||+||+|+||||+++|+.|++.+
T Consensus 184 ALaaGN~VVlKps~~tp~~~~~l~~~l~e----aglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 259 (498)
T PLN02278 184 ALAAGCTVVVKPSELTPLTALAAAELALQ----AGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGA 259 (498)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999886 7 99999999996 556788888999999999999999999999877
Q ss_pred C---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 463 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 ~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
+ +|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| ++|+++|+++++++.+
T Consensus 260 a~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~ 338 (498)
T PLN02278 260 AATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIY-DKFAEAFSKAVQKLVVGDGFEE 338 (498)
T ss_pred hhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 7999999999887631
Q ss_pred ----------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 005798 533 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 533 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi 573 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai 418 (498)
T PLN02278 339 GVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAI 418 (498)
T ss_pred CCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHH
Confidence 12 244322 12 33 5 2 468899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||.+.||+| +++|++|+++||+.|+|.+
T Consensus 419 ~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~i~~ 494 (498)
T PLN02278 419 AIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGIDEYLEIKYVCL 494 (498)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhheeEEEEE
Confidence 999999999999999999999999999999999999987665567899999999886 3569999999999999976
Q ss_pred c
Q 005798 654 G 654 (676)
Q Consensus 654 ~ 654 (676)
+
T Consensus 495 ~ 495 (498)
T PLN02278 495 G 495 (498)
T ss_pred e
Confidence 4
No 19
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=1.6e-74 Score=649.28 Aligned_cols=398 Identities=17% Similarity=0.190 Sum_probs=338.1
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
.++.+|+.++++...+ .+|+++++++|++||+. |++++.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 78 ~~P~tg~~i~~v~~~~------~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 78 LDPRTGEVIAHVAEGD------AEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3467888899987777 88999999999999984 999999999999999999999999999999887765432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCCC-hh-hHHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIAS 383 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~-~~~~~~~ 383 (676)
. ++. ..|+...++.+++++.+.+. .+...+. ..+...+++++|+|||++|+||| |. +.+++++
T Consensus 152 ~----~a~-------~~Ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~ 217 (538)
T PLN02466 152 E----QSA-------KAELPMFARLFRYYAGWADKIHGLTVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 217 (538)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHHh
Confidence 1 111 13566777777777654332 2332221 12234578899999999999994 85 5689999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
|||++||+||+|||+.||+++..+++++.+ + ||+|+||+|+| ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 218 pALaaGN~VVlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~ 293 (538)
T PLN02466 218 PALACGNTIVLKTAEQTPLSALYAAKLLHE----AGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293 (538)
T ss_pred HHHHcCCEEEeECCCCCcHHHHHHHHHHHh----cCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56778889999999999999999999999886
Q ss_pred cC----CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----
Q 005798 462 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 532 (676)
Q Consensus 462 a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 532 (676)
++ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|++++.++.+
T Consensus 294 aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~vG~p~ 372 (538)
T PLN02466 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY-DEFVEKAKARALKRVVGDPF 372 (538)
T ss_pred HHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCc
Confidence 63 7999999999999999999999999999999999987 999999999999999 7999999987665421
Q ss_pred ------------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||
T Consensus 373 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~de 452 (538)
T PLN02466 373 KKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDE 452 (538)
T ss_pred cCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHH
Confidence 22 233321 12 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|++|+++||+.|++
T Consensus 453 Ai~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G----~~~G~~gl~~ft~~k~v 528 (538)
T PLN02466 453 VIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIG----REKGIYSLNNYLQVKAV 528 (538)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccC----cccHHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999987766677899999999986 35699999999999999
Q ss_pred EEcC
Q 005798 652 LRGN 655 (676)
Q Consensus 652 ~~~~ 655 (676)
++..
T Consensus 529 ~~~~ 532 (538)
T PLN02466 529 VTPL 532 (538)
T ss_pred EEeC
Confidence 7753
No 20
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=2.3e-74 Score=644.24 Aligned_cols=400 Identities=15% Similarity=0.143 Sum_probs=336.4
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 20 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 93 (477)
T cd07113 20 TNPATEQVIASVASAT------EADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIH 93 (477)
T ss_pred eCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHH
Confidence 4567889899987777 78999999999999985 9999999999999999999999999999998776654321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-cccccccc-c--cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT-E--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 381 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 381 (676)
++. ..|+...++.+++++++.+. .+...+.. . ...+...+++|+|+|||++|+|| ||. +.+++
T Consensus 94 ----~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 162 (477)
T cd07113 94 ----LSR-------AFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWK 162 (477)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHH
Confidence 111 12566666666666544322 22221110 0 01123567889999999999999 585 57899
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHH
Q 005798 382 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 460 (676)
Q Consensus 382 ~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 460 (676)
++|||++||+||+|||+.||+++..+++++.+ + +|+|+||+|+|...+++.|..||+||+|+||||+++|+.|++
T Consensus 163 i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 238 (477)
T cd07113 163 IGAALATGCTIVIKPSEFTPLTLLRVAELAKE----AGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGR 238 (477)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999986 7 999999999963337888889999999999999999999998
Q ss_pred hc---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----
Q 005798 461 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 532 (676)
Q Consensus 461 ~a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 532 (676)
.+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 317 (477)
T cd07113 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKF-DELVTKLKQALSSFQVGSPM 317 (477)
T ss_pred HHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHH-HHHHHHHHHHHHhCCCCCCC
Confidence 77 39999999999999999999999999999999999987 999999999999999 7999999999877521
Q ss_pred ------------------------------EE-ecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 ------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 ------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+... .++| | | ++|++++||+||||++|++|+|+||
T Consensus 318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 22 244322 1333 5 2 3689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.++++++++++++|+|+||.++...+..||||.+.||+| +++|.+|+++||+.|+|
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v 473 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIG----REFGSAFIDDYTELKSV 473 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCC----ccchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999987666677899999999886 35699999999999999
Q ss_pred EEc
Q 005798 652 LRG 654 (676)
Q Consensus 652 ~~~ 654 (676)
+++
T Consensus 474 ~~~ 476 (477)
T cd07113 474 MIR 476 (477)
T ss_pred EEe
Confidence 764
No 21
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=4.8e-74 Score=641.78 Aligned_cols=401 Identities=19% Similarity=0.231 Sum_probs=342.3
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++.
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 89 (478)
T cd07086 18 RNPANGEPIARVFPAS------PEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKIL-- 89 (478)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 4577899999988877 88999999999999999999999999999999999999999999999877654432
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
.++ ..++..+++.+++++...+. .+...+. ...+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 90 --~~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~A 157 (478)
T cd07086 90 --PEG--------LGEVQEMIDICDYAVGLSRMLYGLTIPS--ERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIA 157 (478)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHH
Confidence 111 23566666666666543322 2222221 11233567889999999999998 596 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.+|+|+..+++++.++|.++ +|+|++|+|++...++++|.+||+||+|+||||+++|+.|++.+
T Consensus 158 LaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~ 237 (478)
T cd07086 158 LVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVAR 237 (478)
T ss_pred HHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999 99999999996444889999999999999999999999998876
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 316 (478)
T cd07086 238 RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVY-DEFLERLVKAYKQVRIGDPLDEGT 316 (478)
T ss_pred cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHH-HHHHHHHHHHHHhCCcCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred --------------------------EEe-cCccc----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 005798 533 --------------------------GLF-GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 533 --------------------------~~~-g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi 573 (676)
+++ |+... .+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 317 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai 396 (478)
T cd07086 317 LVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAI 396 (478)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHH
Confidence 222 44322 13 33 5 2 358999999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhc--cCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~--l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
+++|+++|||++||||+|.+++++++++ +++|+|+||+++.. .+.+||||.+.||+| +++|.+|+++|++.|+
T Consensus 397 ~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~f~~~k~ 472 (478)
T cd07086 397 AINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRST 472 (478)
T ss_pred HHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceEE
Confidence 9999999999999999999999999999 99999999987544 467899999999886 3568999999999999
Q ss_pred EEEc
Q 005798 651 ILRG 654 (676)
Q Consensus 651 v~~~ 654 (676)
|+++
T Consensus 473 i~~~ 476 (478)
T cd07086 473 CTIN 476 (478)
T ss_pred EEEe
Confidence 9875
No 22
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=3.5e-74 Score=642.25 Aligned_cols=397 Identities=19% Similarity=0.182 Sum_probs=339.7
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.+++.
T Consensus 21 ~~P~t~~~~~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 92 (480)
T cd07559 21 YNPVNGKVLCEIPRST------AEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPI-- 92 (480)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 4567888889988877 88999999999999999999999999999999999999999999999887654432
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCCC-hh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~-~~~~~~~~A 385 (676)
.++. ..++...++.++++++..+. .+...+. ..+...++.++|+|||++|+||| |. +.+++++||
T Consensus 93 --~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 93 --RETL-------AADIPLAIDHFRYFAGVIRAQEGSLSEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 1221 12566777777776654322 1222111 12345678899999999999995 85 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 463 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 463 (676)
|++||+||+|||+.||+++..+++++.+ ++|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 236 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGD----LLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE 236 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHH----hCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 499999999996 5678888999999999999999999999998873
Q ss_pred --CCEEeecCCcceEEEcCCC-----CHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---
Q 005798 464 --IPVLGHADGICHVYVDKSA-----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 532 (676)
Q Consensus 464 --~~~~lElGGk~p~iV~~dA-----Dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 532 (676)
+|++||||||||+||++|| |+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 237 ~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p 315 (480)
T cd07559 237 NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIY-DEFIERAVERFEAIKVGNP 315 (480)
T ss_pred cCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 8999999999999999999 999999999999999988 999999999999999 7999999999887632
Q ss_pred -------------------------------EE-ecCccc------ccc-c-c-C-----CCCCcccccccCceEEEEEe
Q 005798 533 -------------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 566 (676)
Q Consensus 533 -------------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~ 566 (676)
++ +|+... .++ + | | +++++++||+||||++|++|
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 395 (480)
T cd07559 316 LDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITF 395 (480)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEee
Confidence 22 243321 122 3 5 2 36789999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcce
Q 005798 567 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 646 (676)
Q Consensus 567 ~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft 646 (676)
+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.|.||+| +++|.+|+++||
T Consensus 396 ~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~ 471 (480)
T cd07559 396 KDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIG----RETHKMMLDHYQ 471 (480)
T ss_pred CCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHhh
Confidence 9999999999999999999999999999999999999999999987766778999999999986 356999999999
Q ss_pred eEEEEEEc
Q 005798 647 TTRWILRG 654 (676)
Q Consensus 647 ~~k~v~~~ 654 (676)
+.|++++.
T Consensus 472 ~~k~v~~~ 479 (480)
T cd07559 472 QTKNILVS 479 (480)
T ss_pred ceEEEEEe
Confidence 99999774
No 23
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=4.8e-74 Score=639.84 Aligned_cols=397 Identities=17% Similarity=0.180 Sum_probs=339.7
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++..|++++.
T Consensus 21 ~nP~t~~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 92 (475)
T cd07117 21 YNPANGETLSEITDAT------DADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPI-- 92 (475)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH--
Confidence 4577888899988888 88999999999999999999999999999999999999999999998876654432
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
.++. ..|+..+++.+++++...+ ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 93 --~~a~-------~~ev~~~i~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 93 --RETR-------AVDIPLAADHFRYFAGVIRAEEGSANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 1221 1267777888887765432 22322111 1233457889999999999999 585 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.+|.++..+++++.+ ++|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQD----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK 236 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHH----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999985 499999999996 566788888999999999999999999999877
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 315 (475)
T cd07117 237 KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIY-DEFVAKLKEKFENVKVGNPLDPDT 315 (475)
T ss_pred cCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred --------------------------EE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 316 ~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 395 (475)
T cd07117 316 QMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDE 395 (475)
T ss_pred cccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHH
Confidence 22 243321 12 33 5 2 4688999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|.+|+++||+.|++
T Consensus 396 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v 471 (475)
T cd07117 396 VIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIG----RETHKSMLDAYTQMKNI 471 (475)
T ss_pred HHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----CCchHHHHHHHhCeEEE
Confidence 99999999999999999999999999999999999999997766778899999999986 35699999999999998
Q ss_pred EEc
Q 005798 652 LRG 654 (676)
Q Consensus 652 ~~~ 654 (676)
++.
T Consensus 472 ~~~ 474 (475)
T cd07117 472 YID 474 (475)
T ss_pred EEe
Confidence 763
No 24
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=6.8e-74 Score=642.12 Aligned_cols=398 Identities=16% Similarity=0.174 Sum_probs=338.5
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+|+.++++...+ .+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++.+|++++.
T Consensus 27 ~nP~tg~~i~~~~~~~------~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 98 (488)
T PRK13252 27 INPATGEVLATVQAAT------PADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPI-- 98 (488)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 4567899999988877 88999999999999999999999999999999999999999999999887765432
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
.++. ..++...++.++++++..+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 99 --~~a~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~A 166 (488)
T PRK13252 99 --QETS-------VVDIVTGADVLEYYAGLAPALEGEQIPL---RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPA 166 (488)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 1221 12455666667766654332 2322211 1234567889999999999999 585 668999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 463 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 463 (676)
|++||+||+|||+.+|+|+..+++++.+ + +|+|+||+|++...+++.|..||+||+|+||||+++|+.|+++++
T Consensus 167 LaaGN~Vv~Kps~~~p~t~~~l~~~~~~----aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~ 242 (488)
T PRK13252 167 LAAGNAMIFKPSEVTPLTALKLAEIYTE----AGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA 242 (488)
T ss_pred HhcCCeEEEeCCccCcHHHHHHHHHHHH----cCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 9999999999999999999999999986 7 999999999964448888889999999999999999999998773
Q ss_pred --CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC---------
Q 005798 464 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 531 (676)
Q Consensus 464 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~--------- 531 (676)
+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.
T Consensus 243 ~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 321 (488)
T PRK13252 243 SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIK-AAFEARLLERVERIRIGDPMDPAT 321 (488)
T ss_pred cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999977 999999999999999 799999999987652
Q ss_pred -------------------------cEE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 532 -------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 532 -------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
.++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 322 ~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~e 401 (488)
T PRK13252 322 NFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDE 401 (488)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHH
Confidence 122 244221 12 33 5 2 3689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|.+|+++||+.|+|
T Consensus 402 ai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~i 477 (488)
T PRK13252 402 VIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIG----RENGIATLEHYTQIKSV 477 (488)
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCC----cCChHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999987655667899999999986 35699999999999999
Q ss_pred EEcC
Q 005798 652 LRGN 655 (676)
Q Consensus 652 ~~~~ 655 (676)
++..
T Consensus 478 ~~~~ 481 (488)
T PRK13252 478 QVEM 481 (488)
T ss_pred EEeC
Confidence 8753
No 25
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=8.6e-74 Score=639.91 Aligned_cols=396 Identities=18% Similarity=0.164 Sum_probs=336.4
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|.+++.
T Consensus 21 ~nP~tg~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 92 (479)
T cd07116 21 ITPVTGKVFCEVPRST------AEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPV-- 92 (479)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 4577899999988777 88999999999999999999999999999999999999999999998877654331
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
.++. ..|+..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++||
T Consensus 93 --~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 160 (479)
T cd07116 93 --RETL-------AADIPLAIDHFRYFAGCIRAQEGSISEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA 160 (479)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHhHHHcCCeeecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 1221 13677788888877754332 2222111 1234567889999999999999 586 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.||+++..+++++.+ ++|+|++|+|+| +.+++..|..||+||+|+||||+++|+.|++.+
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~----alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 236 (479)
T cd07116 161 LAAGNCVVLKPAEQTPASILVLMELIGD----LLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE 236 (479)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----HCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc
Confidence 9999999999999999999999999986 499999999996 566888888999999999999999999999877
Q ss_pred -CCCEEeecCCcceEEEcCC------CCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--
Q 005798 463 -KIPVLGHADGICHVYVDKS------ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~d------ADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-- 532 (676)
.+|++||||||||+||++| ||+|.|++.++++.| |+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~-~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~ 314 (479)
T cd07116 237 NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIY-DRFMERALERVKAIKQGN 314 (479)
T ss_pred CCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCC
Confidence 3899999999999999988 799999999999765 555 999999999999999 7999999999887521
Q ss_pred --------------------------------EE-ecCccc------ccc-c-c-C----CCCCcccccccCceEEEEEe
Q 005798 533 --------------------------------GL-FGGPRA------SKL-L-Q-I----PETRLFHHEYNSMVCTVEIV 566 (676)
Q Consensus 533 --------------------------------~~-~g~~~~------~~~-~-p-v----~~~~~~~eE~FGPVl~i~~~ 566 (676)
++ +|+... .++ + | | +++++++||+||||++|++|
T Consensus 315 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~~ 394 (479)
T cd07116 315 PLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTTF 394 (479)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEEe
Confidence 22 344321 132 3 5 2 46889999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcce
Q 005798 567 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 646 (676)
Q Consensus 567 ~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft 646 (676)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.+.||+| +++|++|+++||
T Consensus 395 ~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~ 470 (479)
T cd07116 395 KDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIG----RENHKMMLDHYQ 470 (479)
T ss_pred CCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988777778899999999986 356999999999
Q ss_pred eEEEEEEc
Q 005798 647 TTRWILRG 654 (676)
Q Consensus 647 ~~k~v~~~ 654 (676)
+.|++.++
T Consensus 471 ~~k~~~~~ 478 (479)
T cd07116 471 QTKNLLVS 478 (479)
T ss_pred ceEEEEEe
Confidence 99999764
No 26
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=7.2e-74 Score=640.82 Aligned_cols=400 Identities=17% Similarity=0.185 Sum_probs=338.1
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.++.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 19 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (481)
T TIGR03216 19 INPVDGRVIARVHEAG------AAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRS 92 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4577899999988777 88999999999999997 9999999999999999999999999999998877654421
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccc-cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
++. ..++..+++.++++++..+. .+...+... ...+...+.+|+|+|||++|+|| ||. +.+++++
T Consensus 93 ----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~ 161 (481)
T TIGR03216 93 ----LAS-------HLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVG 161 (481)
T ss_pred ----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHH
Confidence 111 12455666666666543321 122111000 01133467889999999999999 585 6689999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CC-hhhhhhcCCCCccEEEeecCHHHHHHHHH
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE-EIPDLLKLDDVIDLVIPRGSNKLVSQIKE 460 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~-~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 460 (676)
|||++||+||+|||+.||+|+..+++++.+ + +|+|++|+|+| +. +++++|..||+||+|+||||+++|+.|++
T Consensus 162 ~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~----aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 162 PALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 43 58898999999999999999999999998
Q ss_pred hc---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----
Q 005798 461 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 532 (676)
Q Consensus 461 ~a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 532 (676)
++ .+|++||||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 238 ~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIF-DRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 87 38999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred ------------------------------EE-ecCccc-------cc-cc-c-C-----CCCCcccccccCceEEEEEe
Q 005798 533 ------------------------------GL-FGGPRA-------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIV 566 (676)
Q Consensus 533 ------------------------------~~-~g~~~~-------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~ 566 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 12 243221 13 33 5 2 46899999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcce
Q 005798 567 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 646 (676)
Q Consensus 567 ~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft 646 (676)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+| +++|.+|+++||
T Consensus 397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f~ 472 (481)
T TIGR03216 397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIG----REGGVHSLEFYT 472 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----cCchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999987766677899999999986 356999999999
Q ss_pred eEEEEEEc
Q 005798 647 TTRWILRG 654 (676)
Q Consensus 647 ~~k~v~~~ 654 (676)
+.|+++++
T Consensus 473 ~~k~v~~~ 480 (481)
T TIGR03216 473 ELTNVCIK 480 (481)
T ss_pred ceEEEEEe
Confidence 99999764
No 27
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=6.9e-74 Score=639.18 Aligned_cols=400 Identities=16% Similarity=0.192 Sum_probs=337.4
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
.+|.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 26 ~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 99 (486)
T cd07140 26 INPTDGSVICKVSLAT------VEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVY 99 (486)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcH
Confidence 4577899999988888 8899999999999998 5999999999999999999999999999999877665432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccc-cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 382 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 382 (676)
. ++. ..|+...++.+++++...+. .+...+... .+.+...+++|+|+|||++|+|| ||. +.++++
T Consensus 100 ~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i 168 (486)
T cd07140 100 T----LAL-------KTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKM 168 (486)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHH
Confidence 1 221 12556666666666543322 122221100 01223457889999999999998 596 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHH
Q 005798 383 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 460 (676)
Q Consensus 383 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 460 (676)
+|||++||+||+|||+.||.++..+++++.+ + +|+|++|+|+| +.++++.|..||+|++|+||||+++|+.|++
T Consensus 169 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 244 (486)
T cd07140 169 AACLAAGNTVVLKPAQVTPLTALKFAELTVK----AGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMK 244 (486)
T ss_pred HHHHHhCCEEEEECCccCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999886 7 99999999996 6678888889999999999999999999998
Q ss_pred hcC----CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---
Q 005798 461 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 532 (676)
Q Consensus 461 ~a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 532 (676)
.+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 245 ~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~-~~f~~~l~~~~~~l~~g~p 323 (486)
T cd07140 245 SCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIH-DEFVRRVVEEVKKMKIGDP 323 (486)
T ss_pred HHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhCCccCC
Confidence 763 7999999999999999999999999999999999977 999999999999999 7999999999987632
Q ss_pred -------------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeC--C
Q 005798 533 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD--D 568 (676)
Q Consensus 533 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~--~ 568 (676)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+ |
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~ 403 (486)
T cd07140 324 LDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD 403 (486)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCC
Confidence 22 244321 23 33 5 2 468999999999999999998 6
Q ss_pred HHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeE
Q 005798 569 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 648 (676)
Q Consensus 569 ~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~ 648 (676)
+||||+++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||.+.||+| +++|++|+++||+.
T Consensus 404 ~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~ 479 (486)
T cd07140 404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFG----KDLGEEALNEYLKT 479 (486)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhhcE
Confidence 99999999999999999999999999999999999999999997766677899999999986 35699999999999
Q ss_pred EEEEEc
Q 005798 649 RWILRG 654 (676)
Q Consensus 649 k~v~~~ 654 (676)
|+++++
T Consensus 480 k~v~~~ 485 (486)
T cd07140 480 KTVTIE 485 (486)
T ss_pred EEEEEe
Confidence 999764
No 28
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=5.9e-74 Score=640.71 Aligned_cols=395 Identities=18% Similarity=0.197 Sum_probs=336.8
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
.+|.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++++|++++.
T Consensus 24 ~~P~t~~~i~~v~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 97 (476)
T cd07142 24 IDPRNGEVIAHVAEGD------AEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPY 97 (476)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 4577899999988777 88999999999999975 999999999999999999999999999999887765442
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
. ++. ..|+..+++.+++++.+.+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 98 ~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~ 163 (476)
T cd07142 98 E----QAR-------YAEVPLAARLFRYYAGWADKIHGMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVG 163 (476)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeceeeEEEECCCccHHHHHHHHHH
Confidence 1 111 12566677777777654432 2332221 1223457889999999999998 596 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
|||++||+||+|||+.||+++..+++++.+ + +|+|+||+|+| ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 164 ~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~ 239 (476)
T cd07142 164 PALACGNTIVLKPAEQTPLSALLAAKLAAE----AGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQL 239 (476)
T ss_pred HHHHcCCEEEEECCCcccHHHHHHHHHHHH----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56688889999999999999999999999987
Q ss_pred cC----CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC-----
Q 005798 462 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----- 531 (676)
Q Consensus 462 a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~----- 531 (676)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 240 aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~ 318 (476)
T cd07142 240 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY-DEFVEKAKARALKRVVGDPF 318 (476)
T ss_pred HHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 63 7999999999999999999999999999999999977 999999999999999 799999998887542
Q ss_pred -----------------------------cEE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 532 -----------------------------VGL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 532 -----------------------------~~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
.++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 319 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07142 319 RKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDE 398 (476)
T ss_pred CCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHH
Confidence 122 243321 12 33 5 2 3688999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|++
T Consensus 399 ai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v 474 (476)
T cd07142 399 VIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIG----REKGIYALNNYLQVKAV 474 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHhhheeEE
Confidence 99999999999999999999999999999999999999987777778999999999986 35699999999999998
Q ss_pred E
Q 005798 652 L 652 (676)
Q Consensus 652 ~ 652 (676)
+
T Consensus 475 ~ 475 (476)
T cd07142 475 V 475 (476)
T ss_pred e
Confidence 5
No 29
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.7e-73 Score=634.60 Aligned_cols=395 Identities=16% Similarity=0.170 Sum_probs=335.0
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
++.+|+.++++...+ .+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++.+|++++.
T Consensus 3 ~p~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 73 (456)
T cd07107 3 NPATGQVLARVPAAS------AADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPV--- 73 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH---
Confidence 466888899987777 88999999999999999999999999999999999999999999998887664432
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
.++ ..|+...++.+++++...+. .+...+. ..+...++.|+|+|||++|+|| ||. +.+++++|||
T Consensus 74 -~~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 141 (456)
T cd07107 74 -SAM--------LGDVMVAAALLDYFAGLVTELKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPL 141 (456)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHH
Confidence 121 23555566666665543221 2222221 1233567889999999999999 596 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 462 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a--- 462 (676)
++||+||+|||+.+|+++..+++++.+ +||+|+||+|++ ++++++.|..||++++|+||||+++|+.|++++
T Consensus 142 aaGN~VV~Kps~~~p~~~~~l~~~~~~----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~ 217 (456)
T cd07107 142 AAGNTVVVKPPEQAPLSALRLAELARE----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG 217 (456)
T ss_pred HcCCEEEEeCCCCChHHHHHHHHHHHH----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcC
Confidence 999999999999999999999999986 499999999995 555778888999999999999999999999887
Q ss_pred CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhc-CCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 ~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~-~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+ |.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 296 (456)
T cd07107 218 IKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIY-DEVLARVVERVAAIKVGDPTDPAT 296 (456)
T ss_pred CCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 389999999999999999999999999999996 88776 999999999999999 7999999999886521
Q ss_pred --------------------------EE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +||... .+ ++ | | ++|++++||+||||++|++|+|+||
T Consensus 297 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~e 376 (456)
T cd07107 297 TMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAE 376 (456)
T ss_pred CcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHH
Confidence 22 244221 13 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||.+.||+| +++|++|+++||+.|++
T Consensus 377 ai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~v 452 (456)
T cd07107 377 MVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIG----REECLEELLSYTQEKNV 452 (456)
T ss_pred HHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999998877778999999999986 35699999999999999
Q ss_pred EEc
Q 005798 652 LRG 654 (676)
Q Consensus 652 ~~~ 654 (676)
+++
T Consensus 453 ~~~ 455 (456)
T cd07107 453 NVR 455 (456)
T ss_pred EEe
Confidence 764
No 30
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=1.9e-73 Score=633.12 Aligned_cols=398 Identities=18% Similarity=0.197 Sum_probs=330.7
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.++.+|+.++++...+ .+++++++++|++||+. |+.+|.++|.++|++++++|+++.++|++++.+|++++..
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 77 (455)
T cd07148 4 VNPFDLKPIGEVPTVD------WAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLV 77 (455)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 3567889999988888 88999999999999998 4679999999999999999999999999988876654321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-cccccccc--ccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT--ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 382 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 382 (676)
++. .|+...++.++++++..+. .+...+.. ....+...+++++|+|||++|+|| ||. +.++++
T Consensus 78 ----~a~--------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 145 (455)
T cd07148 78 ----DAK--------VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQV 145 (455)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHH
Confidence 221 1344444444444332211 11111100 001234567889999999999998 585 678999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 383 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 383 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
++||++||+||+|||+.||+++..+++++.+ + ||+|+||+|+++.+.++.|..||+||+|+||||+++|+.|+++
T Consensus 146 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~ 221 (455)
T cd07148 146 APAIAAGCPVIVKPALATPLSCLAFVDLLHE----AGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSK 221 (455)
T ss_pred HHHHHcCCEEEeeCCCcccHHHHHHHHHHHH----cCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999986 7 9999999999655578888899999999999999999999887
Q ss_pred c--CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 462 T--KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 462 a--~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 222 aa~~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 300 (455)
T cd07148 222 LAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA-DDFAQRLAAAAEKLVVGDPTDP 300 (455)
T ss_pred hhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 6 38999999999999999999999999999999999977 999999999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCccccc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 533 ----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 533 ----------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
++ +|+....+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 301 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~ 380 (455)
T cd07148 301 DTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQ 380 (455)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHH
Confidence 12 24333222 23 5 2 36889999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+|+++|||++||||+|.+++.++++++++|+|+||+++... +..||||.+.||+|. ++|++|+++||+.|++.+
T Consensus 381 ~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 381 ANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGT----GGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCC----CchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999876543 467999999999863 568999999999999853
No 31
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=3.9e-73 Score=630.25 Aligned_cols=392 Identities=18% Similarity=0.183 Sum_probs=337.7
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 3 ~P~tg~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (446)
T cd07106 3 NPATGEVFASAPVAS------EAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLA-- 74 (446)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 467889899988777 889999999999999999999999999999999999999999999988766543321
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 387 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 387 (676)
++ ..|+..+++.++++++...+ +...+. ..+...+.+++|+|||++|+|| +|. +.++++++||+
T Consensus 75 --~a--------~~ev~~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALa 140 (446)
T cd07106 75 --EA--------QFEVGGAVAWLRYTASLDLP-DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALL 140 (446)
T ss_pred --HH--------HHHHHHHHHHHHHHHhhhhc-CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 11 23677788888887754422 111111 1234567889999999999999 485 56899999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---C
Q 005798 388 SGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---I 464 (676)
Q Consensus 388 aGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~ 464 (676)
+||+||+|||+.+|.|+..+++++.+ ++|+|++|+|+++.++++.|..||++|+|+||||+++|+.|++++. +
T Consensus 141 aGN~VilKps~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~ 216 (446)
T cd07106 141 AGNTVVLKPSPFTPLCTLKLGELAQE----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLK 216 (446)
T ss_pred cCCEEEEECCccchHHHHHHHHHHHH----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999986 4999999999975567888889999999999999999999998773 8
Q ss_pred CEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-----------
Q 005798 465 PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------- 532 (676)
Q Consensus 465 ~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----------- 532 (676)
|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 217 ~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~G~p~~~~~~~g 295 (446)
T cd07106 217 RVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIY-DEFCEALVALAKAAVVGDGLDPGTTLG 295 (446)
T ss_pred eeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccH-HHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999887 999999999999999 7999999999887632
Q ss_pred -----------------------EE-ecCccc--ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHc
Q 005798 533 -----------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 578 (676)
Q Consensus 533 -----------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~ 578 (676)
++ +|+... .++ + | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 296 pli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~ 375 (446)
T cd07106 296 PVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARAND 375 (446)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhC
Confidence 11 233322 133 3 5 2 46889999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 579 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 579 ~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|++|+++||+.|+|.
T Consensus 376 ~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 376 SEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIG----VEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999998877788999999999886 356999999999999985
No 32
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=2.1e-73 Score=632.12 Aligned_cols=391 Identities=16% Similarity=0.173 Sum_probs=333.8
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (448)
T TIGR01780 3 NPATGEIIGTVPDQG------VEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLK-- 74 (448)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 467889999988877 889999999999999999999999999999999999999999999988776544321
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++ ..|+...++.+++++...+ ..+...+. ...+...+.+++|+|||++|+|| ||. +.+++++|||
T Consensus 75 --~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 142 (448)
T TIGR01780 75 --EA--------KGEILYAASFLEWFAEEAKRVYGDTIPS--PQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAAL 142 (448)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHH
Confidence 11 2366777777776664332 22322221 11234556789999999999998 596 4579999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 462 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~--~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 462 (676)
++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 143 aaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa 218 (448)
T TIGR01780 143 AAGCTVVVKPAEQTPLSALALARLAEQ----AGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSA 218 (448)
T ss_pred HcCCeEeeECCccchHHHHHHHHHHHH----cCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999986 7 99999999995 467788888999999999999999999999877
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 297 (448)
T TIGR01780 219 STVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIY-DEFAKKLAEAVKKLKVGNGLDEG 297 (448)
T ss_pred hcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 005798 533 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 574 (676)
Q Consensus 533 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~ 574 (676)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 298 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 377 (448)
T TIGR01780 298 VTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIA 377 (448)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 12 244322 23 33 5 2 4689999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEE
Q 005798 575 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 575 ~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.+.||+| +++|++|+++||+.|
T Consensus 378 ~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 378 IANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLG----REGSKYGIEEYLETK 448 (448)
T ss_pred HHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhccC
Confidence 99999999999999999999999999999999999998766667899999999986 356999999999875
No 33
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-73 Score=635.82 Aligned_cols=400 Identities=15% Similarity=0.171 Sum_probs=339.8
Q ss_pred HHHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 228 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 228 i~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
+.+|.+++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 21 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 94 (475)
T PRK13473 21 VYNPATGEVLAEIAEAS------AAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLH 94 (475)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 34577889999988888 889999999999999999999999999999999999999999999988766544321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++. ..|+..+++.+++++...+.. +...+.. ..+...+++|+|+|||++|+|| +|. +.+++++|
T Consensus 95 ----~a~-------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ 161 (475)
T PRK13473 95 ----LAL-------NDEIPAIVDVFRFFAGAARCLEGKAAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAP 161 (475)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHHHHH
Confidence 111 125667777777766433322 2211110 1233457889999999999999 585 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 463 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~ 463 (676)
||++||+||+|||+.+|+++..+++++.+ ++|+|++|+|++ +.+++..|..||+||+|+||||+++|+.|++++.
T Consensus 162 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa 237 (475)
T PRK13473 162 ALAAGNTVVLKPSEITPLTALKLAELAAD----ILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA 237 (475)
T ss_pred HHhcCCEEEEECCCCChHHHHHHHHHHHH----hCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 6678888888999999999999999999998773
Q ss_pred ---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 464 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 464 ---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||++|| |+|+++|+++++++.+
T Consensus 238 ~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 316 (475)
T PRK13473 238 DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY-DDLVAKLAAAVATLKVGDPDDED 316 (475)
T ss_pred hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999999886532
Q ss_pred ----------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 005798 533 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 533 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi 573 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 396 (475)
T PRK13473 317 TELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAV 396 (475)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHH
Confidence 22 244322 23 33 5 2 368999999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|.+|+++||+.|++++
T Consensus 397 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~t~~k~i~~ 472 (475)
T PRK13473 397 RWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYG----KDMSLYGLEDYTVVRHVMV 472 (475)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceEEEEE
Confidence 999999999999999999999999999999999999998766677899999999986 3569999999999999987
Q ss_pred cC
Q 005798 654 GN 655 (676)
Q Consensus 654 ~~ 655 (676)
.+
T Consensus 473 ~~ 474 (475)
T PRK13473 473 KH 474 (475)
T ss_pred ec
Confidence 65
No 34
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=3.9e-73 Score=636.41 Aligned_cols=396 Identities=20% Similarity=0.209 Sum_probs=337.0
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++..
T Consensus 21 ~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 93 (488)
T TIGR02299 21 LSPATNEVLGSVARGG------AADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLR- 93 (488)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH-
Confidence 4567888899987777 789999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccc--cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEE--PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..++...++.++++++..+ ..+...+. .....+.+++|+|||++|+|| ||. +.+++++|
T Consensus 94 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 158 (488)
T TIGR02299 94 ---QT--------RQQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAP 158 (488)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHHH
Confidence 11 1255566666666654332 11222211 123457889999999999999 585 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|.|+..+++++.+ + +|+|++|+|++ ++++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 234 (488)
T TIGR02299 159 ALAFGNTVVLKPAEWSPLTAARLAEIAKE----AGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNG 234 (488)
T ss_pred HHHcCCEEEEECchhchHHHHHHHHHHHH----cCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999886 7 99999999996 566778888899999999999999999999886
Q ss_pred ---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 463 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 235 a~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~l~~g~p~~~ 313 (488)
T TIGR02299 235 ADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA-EDFVEKLVERVRAIRVGHPLDP 313 (488)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHhhCCcCCCCCC
Confidence 39999999999999999999999999999999999887 999999999999999 7999999999887531
Q ss_pred ----------------------------EE-ecCccc---------cc-cc-c-C-----CCCCcccccccCceEEEEEe
Q 005798 533 ----------------------------GL-FGGPRA---------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIV 566 (676)
Q Consensus 533 ----------------------------~~-~g~~~~---------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~ 566 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~ 393 (488)
T TIGR02299 314 ETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPF 393 (488)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEee
Confidence 22 243221 12 33 5 2 36889999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcce
Q 005798 567 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 646 (676)
Q Consensus 567 ~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft 646 (676)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.+.||+| +++|++|+++||
T Consensus 394 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~ 469 (488)
T TIGR02299 394 KDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIG----REGGTYSFDFYT 469 (488)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHHh
Confidence 9999999999999999999999999999999999999999999987766667899999999986 356999999999
Q ss_pred eEEEEEEcC
Q 005798 647 TTRWILRGN 655 (676)
Q Consensus 647 ~~k~v~~~~ 655 (676)
+.|+++++.
T Consensus 470 ~~k~i~~~~ 478 (488)
T TIGR02299 470 ETKNVALAL 478 (488)
T ss_pred ceEEEEEec
Confidence 999998865
No 35
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=5.4e-73 Score=631.61 Aligned_cols=397 Identities=19% Similarity=0.222 Sum_probs=335.8
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 15 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 87 (465)
T cd07151 15 LNPYTGETLAEIPAAS------KEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRI- 87 (465)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3467888899888777 889999999999999999999999999999999999999999999998876654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+..+++.+++++...+.. +...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 88 ---~a--------~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 154 (465)
T cd07151 88 ---KA--------NIEWGAAMAITREAATFPLRMEGRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPA 154 (465)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 11 135667777777766543322 2222211 1234467889999999999998 595 668999999
Q ss_pred HHhCCEEEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 386 IRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~-~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
|++||+||+|||+.+|.++ ..+.+++.+ + +|+|+||+|+| +.++++.|..||.+|+|+||||+++|+.|++.+
T Consensus 155 LaaGN~Vi~Kps~~~p~~~~~~l~~~l~~----aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 230 (465)
T cd07151 155 LALGNAVVLKPASDTPITGGLLLAKIFEE----AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELA 230 (465)
T ss_pred HHcCCEEEEECCCCCcHhHHHHHHHHHHH----cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999996 678888875 7 99999999995 566788888999999999999999999998877
Q ss_pred ---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 463 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 231 a~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 309 (465)
T cd07151 231 GRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY-DEFVEKFVERVKALPYGDPSDP 309 (465)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHH
Q 005798 533 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 576 (676)
Q Consensus 533 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~a 576 (676)
++ +|+.....++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 310 ~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 389 (465)
T cd07151 310 DTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELA 389 (465)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHH
Confidence 11 1222211233 5 2 468999999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEEEc
Q 005798 577 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 577 N~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 654 (676)
|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||.+.||+| +++|++|+++||+.|++++.
T Consensus 390 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 390 NDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG----RFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC----cCChHHHHHHhhceEEEEec
Confidence 999999999999999999999999999999999987654 357899999999886 35699999999999998764
No 36
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=4.8e-73 Score=634.10 Aligned_cols=399 Identities=18% Similarity=0.184 Sum_probs=337.0
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|.+++..
T Consensus 21 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~- 93 (478)
T cd07085 21 YNPATGEVIARVPLAT------AEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLA- 93 (478)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-
Confidence 4567889999988878 889999999999999999999999999999999999999999999998876654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+...++.+++++...+ ..++..+.. ..+...+.+++|+|||++|+|| +|. +.+++++||
T Consensus 94 ---~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 160 (478)
T cd07085 94 ---DA--------RGDVLRGLEVVEFACSIPHLLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMA 160 (478)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 21 2356666666666554322 123222110 1234567889999999999998 485 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 463 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 463 (676)
|++||+||+|||+.+|+++..+++++.+ + +|+|+||+|++..+.++.|..||+||+|+||||+++|+.|++++.
T Consensus 161 LaaGN~VvlKps~~tp~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 236 (478)
T cd07085 161 IACGNTFVLKPSERVPGAAMRLAELLQE----AGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA 236 (478)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999999999986 7 999999999965556777888999999999999999999998774
Q ss_pred --CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 464 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 464 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~~~ 315 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEA-DEWIPKLVERAKKLKVGAGDDPGA 315 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999886632
Q ss_pred --------------------------EE-ecCcc------cccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 --------------------------GL-FGGPR------ASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 --------------------------~~-~g~~~------~~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+.. ..++ + | | +++++++||+||||++|++|+|+||
T Consensus 316 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~de 395 (478)
T cd07085 316 DMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDE 395 (478)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHH
Confidence 22 24321 1233 3 6 2 3689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
||+++|+++|||++||||+|.++++++++++++|+|+||++.... +.+||||.+.||+| +++++|++|+++||+.|+
T Consensus 396 ai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~~~g~~~~~~~~~~k~ 473 (478)
T cd07085 396 AIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFG--DLHFYGKDGVRFYTQTKT 473 (478)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCC--CCcCChHHHHHHhcceEE
Confidence 999999999999999999999999999999999999999875443 56899999999986 223569999999999999
Q ss_pred EEEc
Q 005798 651 ILRG 654 (676)
Q Consensus 651 v~~~ 654 (676)
|+++
T Consensus 474 v~~~ 477 (478)
T cd07085 474 VTSR 477 (478)
T ss_pred EEEe
Confidence 9764
No 37
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=3.5e-73 Score=632.71 Aligned_cols=386 Identities=18% Similarity=0.202 Sum_probs=329.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
.+++++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++
T Consensus 6 ~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~----ea~~~Ev~~~~~~i~~~~~ 81 (493)
T PTZ00381 6 PEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPF----ETKMTEVLLTVAEIEHLLK 81 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999999999876632 3333345556678888888
Q ss_pred HHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005798 331 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 408 (676)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 408 (676)
.++.|++.... .. +... .....+++|+|+|||++|+|| ||. +.++++++||+|||+||+||||.||.|+..++
T Consensus 82 ~~~~~~~~~~~-~~--~~~~--~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~ 156 (493)
T PTZ00381 82 HLDEYLKPEKV-DT--VGVF--GPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMA 156 (493)
T ss_pred HHHHHhCCccc-CC--cccc--CCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH
Confidence 88888653211 10 1001 112457889999999999999 585 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCCCCHH
Q 005798 409 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 485 (676)
Q Consensus 409 ~l~~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~ 485 (676)
+++.+ ++|+|++++|+|+.+.+..|..|+ +|+|+||||+++|+.|+++|. +|++||||||||+||++|||++
T Consensus 157 ~ll~~----~lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~ 231 (493)
T PTZ00381 157 KLLTK----YLDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLK 231 (493)
T ss_pred HHHHH----hCCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHH
Confidence 99986 599999999997555666666676 999999999999999998873 9999999999999999999999
Q ss_pred HHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------------------------------E-
Q 005798 486 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G- 533 (676)
Q Consensus 486 ~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------~- 533 (676)
.|++.+++|+|.|+| +|+|++|+|||++++ |+|+++|++.++++.. +
T Consensus 232 ~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~~ 310 (493)
T PTZ00381 232 VAARRIAWGKFLNAGQTCVAPDYVLVHRSIK-DKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGKV 310 (493)
T ss_pred HHHHHHHHHHHhhcCCcCCCCCEEEEeHHHH-HHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCcE
Confidence 999999999999987 999999999999999 7999999998876510 1
Q ss_pred EecCccc--cccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCe
Q 005798 534 LFGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 604 (676)
Q Consensus 534 ~~g~~~~--~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~ 604 (676)
++|+... ..++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++
T Consensus 311 ~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~s 390 (493)
T PTZ00381 311 VYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSS 390 (493)
T ss_pred EECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 1233221 1233 5 2 3689999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEcCCCC--CCCCCcccCcccccccccccccccccchhcceeEEEEEEcC
Q 005798 605 AAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 605 G~v~iN~~~~--~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 655 (676)
|.|+||++.. ..+.+||||.+.||+| +++|.+|+++||+.|+|..+.
T Consensus 391 G~v~IN~~~~~~~~~~~PFGG~g~SG~G----~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 391 GAVVINDCVFHLLNPNLPFGGVGNSGMG----AYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred ceEEECCccccccCCCCCCCCcCccccc----ccchHHHHHhccceeEEEEcc
Confidence 9999998753 3467899999999886 357999999999999998875
No 38
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=4.8e-73 Score=631.42 Aligned_cols=396 Identities=16% Similarity=0.166 Sum_probs=339.9
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++++|++++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~--- 73 (457)
T cd07090 3 EPATGEVLATVHCAG------AEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPI--- 73 (457)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 467888899888877 88999999999999999999999999999999999999999999999887765432
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
.++ ..|+..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| +|. +.++++++||
T Consensus 74 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~AL 141 (457)
T cd07090 74 -EEA--------RVDIDSSADCLEYYAGLAPTLSGEHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPAL 141 (457)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCeeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 122 23566777777777654432 2222211 1244567889999999999998 585 5689999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 463 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-- 463 (676)
++||+||+|||+.+|.|+..+++++.+ + +|+|++|+|++..++++.|..||+||+|+||||+++|+.|++++.
T Consensus 142 aaGN~Vv~Kps~~~~~~~~~l~~~~~~----aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~ 217 (457)
T cd07090 142 ACGNAMVYKPSPFTPLTALLLAEILTE----AGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKG 217 (457)
T ss_pred hcCCeeeecCCCcCcHHHHHHHHHHHH----cCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999986 7 999999999965457888889999999999999999999998874
Q ss_pred -CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---------
Q 005798 464 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 532 (676)
Q Consensus 464 -~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 532 (676)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++..
T Consensus 218 ~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~ 296 (457)
T cd07090 218 IKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIK-DEFTERLVERTKKIRIGDPLDEDTQ 296 (457)
T ss_pred CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999887531
Q ss_pred -------------------------EE-ecCccc-------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 -------------------------GL-FGGPRA-------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 -------------------------~~-~g~~~~-------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 297 ~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~de 376 (457)
T cd07090 297 MGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEE 376 (457)
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHH
Confidence 12 243221 12 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.+.||+| +++|++|+++||+.|++
T Consensus 377 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~f~~~k~~ 452 (457)
T cd07090 377 VIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFG----RENGTAALEHYTQLKTV 452 (457)
T ss_pred HHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhCeEEE
Confidence 99999999999999999999999999999999999999997766677899999999886 35699999999999999
Q ss_pred EEcC
Q 005798 652 LRGN 655 (676)
Q Consensus 652 ~~~~ 655 (676)
.+..
T Consensus 453 ~~~~ 456 (457)
T cd07090 453 YVEM 456 (457)
T ss_pred EEeC
Confidence 8754
No 39
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=4.3e-73 Score=634.71 Aligned_cols=400 Identities=18% Similarity=0.176 Sum_probs=338.1
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-----RRLQALQSQDRRKILLDVADALEANESLIKVENEADVA 303 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~ 303 (676)
.++.+|+.++++...+ .+|+++++++|++|| +.|+.+|.++|.++|++++++|++++++|++++++|.+
T Consensus 28 ~~P~t~~~i~~~~~~~------~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 101 (503)
T PLN02467 28 VNPATEETIGDIPAAT------AEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCG 101 (503)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 4567888899888877 889999999999999 89999999999999999999999999999999887765
Q ss_pred HHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccc-cCCCcEEEEEeeceeEEEEEcCC-Chh-hHH
Q 005798 304 AAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALV 379 (676)
Q Consensus 304 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~ 379 (676)
++.. ++ ..|+..+++.+++++...+. .+....... ...+...+++|+|+|||++|+|| ||. +.+
T Consensus 102 k~~~----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 169 (503)
T PLN02467 102 KPLD----EA--------AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMAT 169 (503)
T ss_pred CCHH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHH
Confidence 4421 22 12566666666666543321 122110000 01123467889999999999999 485 578
Q ss_pred HHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHH
Q 005798 380 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 457 (676)
Q Consensus 380 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~ 457 (676)
++++|||++||+||+|||+.||.++..+++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.
T Consensus 170 ~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~e----ag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 245 (503)
T PLN02467 170 WKVAPALAAGCTAVLKPSELASVTCLELADICRE----VGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRK 245 (503)
T ss_pred HHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHH----cCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999986 7 99999999996 5667888889999999999999999999
Q ss_pred HHHhcC---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-
Q 005798 458 IKESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 532 (676)
Q Consensus 458 i~~~a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~- 532 (676)
|++.+. ||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 246 v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g 324 (503)
T PLN02467 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA-SEFLEKLVKWAKNIKIS 324 (503)
T ss_pred HHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 998773 8999999999999999999999999999999999987 999999999999999 7999999999886521
Q ss_pred ---------------------------------EE-ecCccc----cc-cc-c-C-----CCCCcccccccCceEEEEEe
Q 005798 533 ---------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIV 566 (676)
Q Consensus 533 ---------------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~ 566 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|
T Consensus 325 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 325 DPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 22 244321 13 23 5 2 46889999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcce
Q 005798 567 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 646 (676)
Q Consensus 567 ~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft 646 (676)
+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+++......||||.+.||+| +++|++|+++||
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft 480 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFG----RELGEWGLENYL 480 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999987766667899999999886 356999999999
Q ss_pred eEEEEEEcC
Q 005798 647 TTRWILRGN 655 (676)
Q Consensus 647 ~~k~v~~~~ 655 (676)
+.|++.+..
T Consensus 481 ~~k~i~~~~ 489 (503)
T PLN02467 481 SVKQVTKYI 489 (503)
T ss_pred CeEEEEEec
Confidence 999998854
No 40
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=9.9e-73 Score=630.21 Aligned_cols=396 Identities=16% Similarity=0.154 Sum_probs=338.8
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH-HHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR-RLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
+|.+++.++++...+ .+|+++++++|++||+ .|+ .+|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 28 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 101 (481)
T cd07143 28 NPSTGKLITKIAEAT------EADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFG 101 (481)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH
Confidence 467888899988877 8899999999999998 599 99999999999999999999999999998877654321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
+.. ..|+..+++.+++++.+.+.. +...+. ..+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 102 ----~~~-------~~ev~~~~~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ 167 (481)
T cd07143 102 ----TAK-------RVDVQASADTFRYYGGWADKIHGQVIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAP 167 (481)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHHH
Confidence 110 125677777788777654332 332221 1234567889999999999999 596 55899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|.++..+++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 168 ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~a 243 (481)
T cd07143 168 ALAAGNTIVLKPSELTPLSALYMTKLIPE----AGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAA 243 (481)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHh----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999886 7 99999999996 556788899999999999999999999999876
Q ss_pred C----CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-----
Q 005798 463 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 532 (676)
Q Consensus 463 ~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 532 (676)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 244 a~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~ 322 (481)
T cd07143 244 AKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY-DKFVKRFKEKAKKLKVGDPFA 322 (481)
T ss_pred HHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 3 6999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred -----------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 005798 533 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 572 (676)
Q Consensus 533 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deA 572 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|||
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 402 (481)
T cd07143 323 EDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEA 402 (481)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHH
Confidence 12 233321 12 33 5 2 36889999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 573 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 573 i~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
|+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|++|+++||+.|+++
T Consensus 403 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~~k~i~ 478 (481)
T cd07143 403 IKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIG----RELGEYALENYTQIKAVH 478 (481)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccC----cccHHHHHHHHhCeEEEE
Confidence 9999999999999999999999999999999999999998777778899999999886 357999999999999997
Q ss_pred Ec
Q 005798 653 RG 654 (676)
Q Consensus 653 ~~ 654 (676)
++
T Consensus 479 ~~ 480 (481)
T cd07143 479 IN 480 (481)
T ss_pred Ee
Confidence 63
No 41
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=1.9e-72 Score=624.30 Aligned_cols=389 Identities=19% Similarity=0.220 Sum_probs=330.0
Q ss_pred CceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHH
Q 005798 235 KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSL 314 (676)
Q Consensus 235 ~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~ 314 (676)
+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++.. ++
T Consensus 2 ~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a- 70 (443)
T cd07152 2 AVLGEVGVAD------AADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRP----KA- 70 (443)
T ss_pred CEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH----HH-
Confidence 4567777777 789999999999999999999999999999999999999999999998877654321 11
Q ss_pred HHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCE
Q 005798 315 VSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNG 391 (676)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~ 391 (676)
..|+..+++.+++++...+ +.+...+. ..+...+.+|+|+|||++|+|| +|. +.+++++|||++||+
T Consensus 71 -------~~ev~~~i~~l~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~ 140 (443)
T cd07152 71 -------GFEVGAAIGELHEAAGLPTQPQGEILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNA 140 (443)
T ss_pred -------HHHHHHHHHHHHHHHHhHHHhCCccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCE
Confidence 2367777788887765432 33332221 1344567889999999999999 585 568999999999999
Q ss_pred EEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCE
Q 005798 392 LLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPV 466 (676)
Q Consensus 392 vVlKps~~tp~t~-~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~ 466 (676)
||+|||+.+|.++ ..+++++.+ + +|+|++|+|+++.+++..|..||++|+|+||||+.+|+.|+++++ +|+
T Consensus 141 VvlKps~~~p~~~~~~l~~~~~~----ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~ 216 (443)
T cd07152 141 VVLKPDPRTPVSGGVVIARLFEE----AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKV 216 (443)
T ss_pred EEEECCcccchhHHHHHHHHHHH----hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcE
Confidence 9999999999996 688888876 7 999999999975567888888999999999999999999998763 999
Q ss_pred EeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------------
Q 005798 467 LGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------- 532 (676)
Q Consensus 467 ~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------- 532 (676)
++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 217 ~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 295 (443)
T cd07152 217 SLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVA-DAYTAKLAAKAKHLPVGDPATGQVALGPL 295 (443)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 9999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred ---------------------EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCc
Q 005798 533 ---------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH 583 (676)
Q Consensus 533 ---------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL 583 (676)
++ +|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++|||
T Consensus 296 i~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 375 (443)
T cd07152 296 INARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGL 375 (443)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccc
Confidence 11 1222211233 5 2 4689999999999999999999999999999999999
Q ss_pred eeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 584 TDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 584 ~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
++||||+|.++++++++++++|.|+||+++... +..||||.+.||+|. +++|++|+++|++.|+++
T Consensus 376 ~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~---~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 376 SAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGS---RFGGPANWEEFTQWQWVT 442 (443)
T ss_pred eEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCC---ccCcHHHHHHhhceeEEe
Confidence 999999999999999999999999999876554 568999999998762 345899999999999975
No 42
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.6e-72 Score=630.84 Aligned_cols=397 Identities=16% Similarity=0.220 Sum_probs=337.9
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.+|.+|+.++++...+ .+++++++++|++||+. |+.+|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 28 ~~P~tg~~i~~~~~~~------~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 101 (484)
T cd07144 28 VNPSTGEVIASVYAAG------EEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYH 101 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH
Confidence 3467888899988887 88999999999999996 8899999999999999999999999999988876544321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
+.. ..++..+++.++++++..+. .+...+. ..+...+..|+|+|||++|+|| ||. +.+++++|
T Consensus 102 ----~~~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ 167 (484)
T cd07144 102 ----SNA-------LGDLDEIIAVIRYYAGWADKIQGKTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAP 167 (484)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHH
Confidence 111 23566677777776654332 2322221 1234467889999999999998 596 57899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|+++..+.+++.+ + +|+|+||+|+| +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 168 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 243 (484)
T cd07144 168 ALAAGNTVVIKPAENTPLSLLYFANLVKE----AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243 (484)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHH----hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 666888899999999999999999999999876
Q ss_pred ---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHh-cC------
Q 005798 463 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EG------ 531 (676)
Q Consensus 463 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~------ 531 (676)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|++++++ ++
T Consensus 244 ~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~G~p~~ 322 (484)
T cd07144 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIY-DKFVEKFVEHVKQNYKVGSPFD 322 (484)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhhCCcCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999874 32
Q ss_pred ----------------------------cEE-ecCccc-----ccc-c-c-C-----CCCCcccccccCceEEEEEeCCH
Q 005798 532 ----------------------------VGL-FGGPRA-----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 569 (676)
Q Consensus 532 ----------------------------~~~-~g~~~~-----~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~ 569 (676)
.++ +|+... .++ + | | +++.+++||+||||++|++|+|+
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 402 (484)
T cd07144 323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTY 402 (484)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCH
Confidence 122 344321 233 3 5 2 46899999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEE
Q 005798 570 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 570 deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.+.||+| +++|++|+++||+.|
T Consensus 403 ~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k 478 (484)
T cd07144 403 EEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIG----RELGEYGLETYTQTK 478 (484)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCC----CCchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999998766677899999999986 356999999999999
Q ss_pred EEEEc
Q 005798 650 WILRG 654 (676)
Q Consensus 650 ~v~~~ 654 (676)
+|.++
T Consensus 479 ~v~~~ 483 (484)
T cd07144 479 AVHIN 483 (484)
T ss_pred EEEEe
Confidence 99764
No 43
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=1.9e-72 Score=626.43 Aligned_cols=394 Identities=18% Similarity=0.219 Sum_probs=333.4
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (456)
T cd07110 3 NPATEATIGEIPAAT------AEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLD-- 74 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 467889999988877 889999999999999999999999999999999999999999999998877654321
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhcccccc----cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI----GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
++. .|+..+++.++++++..+.. +...+. ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 75 --~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 142 (456)
T cd07110 75 --EAA--------WDVDDVAGCFEYYADLAEQLDAKAERAVPL--PSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVA 142 (456)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhhccCCccccC--CCCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 221 24555555555554332211 111111 11244567889999999999998 596 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
+||++||+||+|||+.||+++..+++++.+ + +|+|+||+|++ +++.++.|..||+||+|+||||+++|+.|+++
T Consensus 143 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~ 218 (456)
T cd07110 143 PALAAGCTVVLKPSELTSLTELELAEIAAE----AGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQA 218 (456)
T ss_pred HHHHcCCEEEEECcccchHHHHHHHHHHHH----cCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55678888899999999999999999999988
Q ss_pred cC---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC------
Q 005798 462 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG------ 531 (676)
Q Consensus 462 a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~------ 531 (676)
++ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 219 aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 297 (456)
T cd07110 219 AAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIA-DAFLERLATAAEAIRVGDPLE 297 (456)
T ss_pred HhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 73 9999999999999999999999999999999999987 999999999999999 799999999987652
Q ss_pred ----------------------------cEE-ecCccc----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 005798 532 ----------------------------VGL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 532 ----------------------------~~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
.++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 298 ~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 377 (456)
T cd07110 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATED 377 (456)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHH
Confidence 122 244321 23 33 5 2 367899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.+.||+| +++|++|+++||+.|+
T Consensus 378 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~ 453 (456)
T cd07110 378 EAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIG----RELGEWGLDNYLEVKQ 453 (456)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHhcceeE
Confidence 999999999999999999999999999999999999999987766677899999999886 3569999999999999
Q ss_pred EE
Q 005798 651 IL 652 (676)
Q Consensus 651 v~ 652 (676)
+.
T Consensus 454 i~ 455 (456)
T cd07110 454 IT 455 (456)
T ss_pred Ee
Confidence 85
No 44
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-72 Score=629.60 Aligned_cols=400 Identities=18% Similarity=0.190 Sum_probs=332.6
Q ss_pred HHHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 228 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 228 i~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
+.+|.+|+.++++...+ .+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|++++..
T Consensus 35 ~~~P~t~~~i~~~~~a~------~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~ 108 (496)
T PLN00412 35 ITNPSTRKTQYKVQACT------QEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAK 108 (496)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 35677888888887777 889999999999999999999999999999999999999999999999988766542
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cc--ccccccc--cc-CCCcEEEEEeeceeEEEEEcCC-Chh-hHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PI--GQILKRT--EL-ADGLILEKTSCPLGVLLIVFES-RPD-ALV 379 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~--~~-~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~ 379 (676)
++. .|+...++.+++++.... .. +...+.. .. ..+...+++|+|+|||++|+|| +|. +.+
T Consensus 109 ----~a~--------~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 176 (496)
T PLN00412 109 ----DAV--------TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAV 176 (496)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHH
Confidence 221 133334444444332111 00 1111100 00 0122456789999999999999 584 678
Q ss_pred HHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHH
Q 005798 380 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 457 (676)
Q Consensus 380 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~ 457 (676)
++++|||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+|||| .+|+.
T Consensus 177 ~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~ 251 (496)
T PLN00412 177 SKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHL----AGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIA 251 (496)
T ss_pred HHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHH
Confidence 9999999999999999999999999999999976 7 99999999996 5568888999999999999999 99999
Q ss_pred HHHhcC-CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---
Q 005798 458 IKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 532 (676)
Q Consensus 458 i~~~a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 532 (676)
|++.+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 252 v~~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 330 (496)
T PLN00412 252 ISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA-DALVEKVNAKVAKLTVGPP 330 (496)
T ss_pred HHHHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHH-HHHHHHHHHHHHhCccCCC
Confidence 998874 9999999999999999999999999999999999987 999999999999999 7999999999887642
Q ss_pred ------------------------------EEe-cCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 005798 533 ------------------------------GLF-GGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 574 (676)
Q Consensus 533 ------------------------------~~~-g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~ 574 (676)
+++ |+.....++ | | +++++++||+||||++|++|+|+||||+
T Consensus 331 ~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~ 410 (496)
T PLN00412 331 EDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIH 410 (496)
T ss_pred cccCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHH
Confidence 111 111111122 5 2 4689999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCC-CCCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 575 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 575 ~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
++|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||.+.||+|+ ++|++|+++||+.|++++
T Consensus 411 ~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i~~ 486 (496)
T PLN00412 411 HCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGS----QGITNSINMMTKVKSTVI 486 (496)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCC----CChHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999864 34578999999999873 569999999999999987
Q ss_pred cC
Q 005798 654 GN 655 (676)
Q Consensus 654 ~~ 655 (676)
+.
T Consensus 487 ~~ 488 (496)
T PLN00412 487 NL 488 (496)
T ss_pred ec
Confidence 64
No 45
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=2e-72 Score=625.86 Aligned_cols=398 Identities=22% Similarity=0.252 Sum_probs=332.8
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (452)
T cd07147 4 TNPYTGEVVARVALAG------PDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIK- 76 (452)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3567888899987777 889999999999999999999999999999999999999999999988776544321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccc--cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
++ ..|+...+..+++++.... ..++..+... ...+...++.++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (452)
T cd07147 77 ---DA--------RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVA 145 (452)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHH
Confidence 21 1245555555655543321 1122111000 01234556789999999999999 585 6789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
+||++||+||+|||+.+|.++..+++++.+ + +|+|+||+|++..+.+..|..||++|+|+||||+++|+.|++.+
T Consensus 146 ~ALaaGN~VIlKps~~~p~~~~~l~~~l~~----ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a 221 (452)
T cd07147 146 PAIAAGCPFVLKPASRTPLSALILGEVLAE----TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARA 221 (452)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999986 7 99999999996555677888899999999999999999999886
Q ss_pred C-CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 ~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
+ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++..
T Consensus 222 ~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 300 (452)
T cd07147 222 GKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVY-DEFKSRLVARVKALKTGDPKDDAT 300 (452)
T ss_pred CcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 4 8999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred --------------------------EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHc
Q 005798 533 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 578 (676)
Q Consensus 533 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~ 578 (676)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 301 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~ 380 (452)
T cd07147 301 DVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVND 380 (452)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhC
Confidence 11 1222222233 5 2 36889999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 579 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 579 ~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.++||+| +++|++|+++||+.|+|++
T Consensus 381 ~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 381 SKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIG----REGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhcceeEEeC
Confidence 9999999999999999999999999999999987654 467899999999986 3579999999999999864
No 46
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=2.4e-72 Score=627.70 Aligned_cols=397 Identities=20% Similarity=0.195 Sum_probs=337.1
Q ss_pred HHHH-hCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.+|. +++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|.+++..
T Consensus 19 ~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (473)
T cd07097 19 RNPSDTSDVVGKYARAS------AEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTLP 92 (473)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 4567 488889888777 889999999999999999999999999999999999999999999998877654421
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..|+..+++.+++++...+. .|...+. ...+...++.++|+|||++|+|| +|. +.+++++|
T Consensus 93 ----~a--------~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ 158 (473)
T cd07097 93 ----EA--------RGEVTRAGQIFRYYAGEALRLSGETLPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAP 158 (473)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHH
Confidence 11 23666777777777654322 2322211 11244567889999999999998 585 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++.+
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 234 (473)
T cd07097 159 ALAYGNTVVFKPAELTPASAWALVEILEE----AGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAA 234 (473)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 556888888999999999999999999999877
Q ss_pred ---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 463 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 235 a~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 313 (473)
T cd07097 235 AARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIH-DRFVEALVERTKALKVGDALDE 313 (473)
T ss_pred hccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred ----------------------------EE-ecCccc----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 ----------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 ----------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 393 (473)
T cd07097 314 GVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDE 393 (473)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHH
Confidence 12 244321 13 33 5 2 3689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
||+++|+++|||++||||+|.+++.++++++++|+|+||+++.. .+.+||||.+.||+|. +++|++|+++||+.|+
T Consensus 394 ai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~---~~~g~~~l~~f~~~k~ 470 (473)
T cd07097 394 ALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP---REQGEAALEFYTTIKT 470 (473)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc---cCCcHHHHHHhhceeE
Confidence 99999999999999999999999999999999999999987654 3578999999998861 2469999999999999
Q ss_pred EEE
Q 005798 651 ILR 653 (676)
Q Consensus 651 v~~ 653 (676)
|++
T Consensus 471 v~~ 473 (473)
T cd07097 471 VYV 473 (473)
T ss_pred EeC
Confidence 853
No 47
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=2.8e-72 Score=622.71 Aligned_cols=387 Identities=20% Similarity=0.214 Sum_probs=323.3
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
.+|+++++++|++||+.|+.+|..+|.++|++++++|++|+++|++++++|++++.. ++...++..+...++++++
T Consensus 5 ~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 5 GETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRV----EAYRDEVGVLTKSANLALS 80 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 779999999999999999999999999999999999999999999999988766531 2322233333445555555
Q ss_pred HHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005798 331 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 408 (676)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 408 (676)
.++.+.+... + ..+.. ..+...++.|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+..++
T Consensus 81 ~~~~~~~~~~--~-~~~~~--~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~ 155 (484)
T PLN02203 81 NLKKWMAPKK--A-KLPLV--AFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA 155 (484)
T ss_pred HHHHHhcccc--c-cCCcc--cCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHH
Confidence 5555443110 0 11100 1233567889999999999999 485 56899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcC---CC
Q 005798 409 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDK---SA 482 (676)
Q Consensus 409 ~l~~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~---dA 482 (676)
+++.+ ++|+|+||+|+|+.++++.|..|+ ||+|+||||+++|+.|++.+ .+|+++|||||||+||++ ||
T Consensus 156 ~~~~~----~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~da 230 (484)
T PLN02203 156 ANIPK----YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSR 230 (484)
T ss_pred HHHHH----hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCC
Confidence 99985 499999999998667888888885 99999999999999999887 499999999999999997 69
Q ss_pred CHHHHHHHHHHhcCC-CCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----------------------------
Q 005798 483 NLDVAKNIVIDAKID-YPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------- 532 (676)
Q Consensus 483 Dl~~A~~~iv~~~~~-n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------------------------- 532 (676)
|+|.|++.+++|+|. |+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 231 Dl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a 309 (484)
T PLN02203 231 DTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFA-PILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDP 309 (484)
T ss_pred CHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999995 666 999999999999999 7999999998876521
Q ss_pred ----E-EecCccc-ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHH
Q 005798 533 ----G-LFGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 598 (676)
Q Consensus 533 ----~-~~g~~~~-~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~ 598 (676)
. ++|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++
T Consensus 310 ~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 310 RVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred HhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 1 2243221 233 3 5 2 3689999999999999999999999999999999999999999999999999
Q ss_pred HhccCeeeEEEcCCCC--CCCCCcccCcccccccccccccccccchhcceeEEEEEEcCc
Q 005798 599 LCQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 656 (676)
Q Consensus 599 ~~~l~~G~v~iN~~~~--~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~ 656 (676)
++++++|.|+||++.. ..+.+||||.+.||+| +++|++|+++||+.|+|++...
T Consensus 390 ~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~G----r~~g~~~l~~ft~~k~v~~~~~ 445 (484)
T PLN02203 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFG----RYHGKYSFDTFSHEKAVLRRSL 445 (484)
T ss_pred HHhCCcceEEECCcccccCCCCCCCCCcCcccCC----ccccHHHHHHhcceeEEEEcCc
Confidence 9999999999998754 2367899999999886 3569999999999999988753
No 48
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.8e-72 Score=624.56 Aligned_cols=396 Identities=18% Similarity=0.206 Sum_probs=337.8
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (453)
T cd07115 3 NPATGELIARVAQAS------AEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIR-- 74 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 356788889988777 789999999999999999999999999999999999999999999998877654321
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++. ..|+..+++.+++++.+.+. .+...+. ..+...+++++|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (453)
T cd07115 75 --AAR-------RLDVPRAADTFRYYAGWADKIEGEVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPAL 142 (453)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 221 12455666666666654322 2322221 1334567889999999999999 585 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 143 aaGN~Vi~Kps~~~p~~~~~l~~~~~~----aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~ 218 (453)
T cd07115 143 AAGNTVVLKPAELTPLSALRIAELMAE----AGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG 218 (453)
T ss_pred hcCCEEEEECCCCCcHHHHHHHHHHHh----cCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999986 7 99999999996 556788888999999999999999999999877
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhc----------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE---------- 530 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~---------- 530 (676)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++
T Consensus 219 ~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 297 (453)
T cd07115 219 NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIY-DEFLERFTSLARSLRPGDPLDPKT 297 (453)
T ss_pred cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 38999999999999999999999999999999999877 999999999999999 79999999988765
Q ss_pred ------------------------CcEEe-cCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 531 ------------------------GVGLF-GGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 531 ------------------------~~~~~-g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
|.+++ |+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07115 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRI 377 (453)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHH
Confidence 22232 44332 23 33 5 2 36789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEEc
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 654 (676)
+|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+|. ++|++|+++|++.|+++++
T Consensus 378 ~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 378 ANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGR----EMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCc----CchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999887777789999999998863 5699999999999999763
No 49
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=3.4e-72 Score=624.47 Aligned_cols=397 Identities=19% Similarity=0.253 Sum_probs=334.9
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+++.++++...+ .+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 5 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 76 (456)
T cd07145 5 NPANGEVIDTVPSLS------REEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIK-- 76 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH--
Confidence 467888889887777 889999999999999999999999999999999999999999999998876654321
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccc--cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..|+..+++.++++++..+ ..+...+... ...+...+++++|+|||++|+|| +|. +.++++++
T Consensus 77 --~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 146 (456)
T cd07145 77 --QS--------RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAP 146 (456)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHH
Confidence 22 1356666777776654322 1122111100 01133467889999999999999 585 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|+++..+++++++ + +|+|++|+|+| ++++++.|..||++|+|+||||+++|+.|++.+
T Consensus 147 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a 222 (456)
T cd07145 147 AIAVGNSVVVKPSSNTPLTAIELAKILEE----AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKA 222 (456)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 567888888999999999999999999999887
Q ss_pred C---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 463 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 ~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 223 a~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 301 (456)
T cd07145 223 GGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVY-DKFLKLLVEKVKKLKVGDPLDE 301 (456)
T ss_pred hhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCC
Confidence 4 9999999999999999999999999999999999987 999999999999999 7999999999887531
Q ss_pred ----------------------------EE-ecCccccc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 533 ----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 533 ----------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
++ +|+....+ ++ | | +++.+++||+||||++|++|+|+||||++
T Consensus 302 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 381 (456)
T cd07145 302 STDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEI 381 (456)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHH
Confidence 11 23322212 33 5 2 36889999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+|+++|||++||||+|.+++.++++++++|.|+||+..... +.+||||.++||+| +++|++|+++|++.|+|.+
T Consensus 382 ~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 382 ANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIG----REGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC----cCchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999876443 57899999999986 3569999999999999863
No 50
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=3.2e-72 Score=624.00 Aligned_cols=394 Identities=17% Similarity=0.179 Sum_probs=327.5
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~-- 73 (454)
T cd07101 2 APFTGEPLGELPQST------PADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARR-- 73 (454)
T ss_pred cCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 367889999888888 889999999999999999999999999999999999999999999999888765532
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++. .|+...+..+++++...+. .+........+.....+.+++|+|||++|+|| +|. +.++++++||
T Consensus 74 --~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 143 (454)
T cd07101 74 --HAF--------EEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPAL 143 (454)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHH
Confidence 221 2344444444444332211 11110000001123567889999999999998 584 6789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 463 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 463 (676)
++||+||+|||+.+|+++..+++++.+ + +|+|++|+|+| +.++++.|.+| +|+|+||||+++|+.|++.++
T Consensus 144 aaGN~vvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~ 217 (454)
T cd07101 144 LAGNAVVLKPDSQTALTALWAVELLIE----AGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR 217 (454)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999986 7 99999999996 55677777776 689999999999999998773
Q ss_pred --CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 464 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 464 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~~~~~~~ 296 (454)
T cd07101 218 RLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVY-DEFVRRFVARTRALRLGAALDYGP 296 (454)
T ss_pred cCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999977 999999999999999 7999999999876531
Q ss_pred --------------------------EE-ecCccc---cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 005798 533 --------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 574 (676)
Q Consensus 533 --------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~ 574 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 297 ~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 376 (454)
T cd07101 297 DMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIE 376 (454)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHH
Confidence 22 243221 12 33 5 2 3678999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCC---CCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 575 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 575 ~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~---~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
++|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||.+.||+| +++|++|+++||+.|++
T Consensus 377 ~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~v 452 (454)
T cd07101 377 LANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLG----RRHGAEGLLKYTETQTV 452 (454)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccC----ccchHHHHHHhcceEEE
Confidence 9999999999999999999999999999999999998654 2356899999999986 35699999999999998
Q ss_pred E
Q 005798 652 L 652 (676)
Q Consensus 652 ~ 652 (676)
+
T Consensus 453 ~ 453 (454)
T cd07101 453 A 453 (454)
T ss_pred e
Confidence 6
No 51
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=1.8e-72 Score=624.02 Aligned_cols=394 Identities=20% Similarity=0.228 Sum_probs=336.4
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
+|.+|+.++++...+ .+|+++++++|++||+. |+. +.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 3 nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 75 (455)
T cd07120 3 DPATGEVIGTYADGG------VAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILG 75 (455)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 467888899988888 88999999999999985 998 899999999999999999999999998877654321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCCC-hh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~-~~~~~~~~ 384 (676)
++ ..|+..+++.++++++..+. .+...+. ..+...++.|+|+|||++|+||| |. +.+++++|
T Consensus 76 ----~a--------~~Ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 140 (455)
T cd07120 76 ----EA--------RFEISGAISELRYYAGLARTEAGRMIEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAP 140 (455)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHH
Confidence 22 23667777777777654322 2322211 12345678899999999999994 85 67899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|+++..++++++++ + +|+|+||+|++ +.++++.|..||+|++|+||||+++|+.|++.+
T Consensus 141 AL~aGN~vvlKps~~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 217 (455)
T cd07120 141 ALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAA 217 (455)
T ss_pred HHHcCCEEEeECCCCChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999863 5 99999999995 566788888999999999999999999998876
Q ss_pred ---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 463 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 218 a~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~ 296 (455)
T cd07120 218 APTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIA-DEVRDRLAARLAAVKVGPGLDP 296 (455)
T ss_pred HhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999886631
Q ss_pred ----------------------------EE-ecCcc-c----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 005798 533 ----------------------------GL-FGGPR-A----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 533 ----------------------------~~-~g~~~-~----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
++ +|+.+ . .+ ++ | | ++|.+++||+||||++|++|+|+|
T Consensus 297 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~d 376 (455)
T cd07120 297 ASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEA 376 (455)
T ss_pred CCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHH
Confidence 22 23321 1 12 33 5 2 368899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
|||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.++||+| +++|++|+++||+.|+
T Consensus 377 eai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~ft~~k~ 452 (455)
T cd07120 377 EAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLG----RLHGVAALEDFIEYKH 452 (455)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccC----ccchHHHHHHHhceeE
Confidence 999999999999999999999999999999999999999998877778899999999986 3569999999999999
Q ss_pred EEE
Q 005798 651 ILR 653 (676)
Q Consensus 651 v~~ 653 (676)
+++
T Consensus 453 v~~ 455 (455)
T cd07120 453 IYL 455 (455)
T ss_pred EeC
Confidence 863
No 52
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=3.5e-72 Score=623.99 Aligned_cols=393 Identities=19% Similarity=0.207 Sum_probs=335.5
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
+|.+|+.++++...+ .+|+++++++|++||+.|. ++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (454)
T cd07109 3 DPSTGEVFARIARGG------AADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLT- 75 (454)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH-
Confidence 467888899988888 8899999999999999876 99999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+..+++.++++++..+. .+...+. ..+...+.+++|+|||++|+|| +|. +.++++++|
T Consensus 76 ---~a--------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 141 (454)
T cd07109 76 ---QA--------RADVEAAARYFEYYGGAADKLHGETIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPA 141 (454)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 21 13566677777776654322 2222221 1344567889999999999999 594 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 462 (676)
|++||+||+|||+.+|+|+..+++++.+ + ||+|+||+|++ +.+.++.|..||+||+|+||||+++|+.|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 217 (454)
T cd07109 142 LAAGNAVVVKPAEDAPLTALRLAELAEE----AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA 217 (454)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 656777788899999999999999999999877
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~G~p~~~~ 296 (454)
T cd07109 218 ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIY-DEVLERLVERFRALRVGPGLEDP 296 (454)
T ss_pred hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCcccC
Confidence 48999999999999999999999999999999999987 999999999999999 7999999999876532
Q ss_pred --------------------------EEe-cCccc-----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 005798 533 --------------------------GLF-GGPRA-----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 572 (676)
Q Consensus 533 --------------------------~~~-g~~~~-----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deA 572 (676)
+++ |+... .+ ++ | | +++.+++||+||||++|++|+|+|||
T Consensus 297 ~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deA 376 (454)
T cd07109 297 DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEA 376 (454)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHH
Confidence 232 33221 12 33 5 2 46899999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCC-CCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 573 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 573 i~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
|+++|+++|||++||||+|.+++.++++++++|+|+||+.. ......||||.+.||+| +++|++|+++|++.|++
T Consensus 377 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~i 452 (454)
T cd07109 377 IALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG----REKGLEALYNYTQTKTV 452 (454)
T ss_pred HHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999876 44567899999999886 35699999999999998
Q ss_pred E
Q 005798 652 L 652 (676)
Q Consensus 652 ~ 652 (676)
+
T Consensus 453 ~ 453 (454)
T cd07109 453 A 453 (454)
T ss_pred e
Confidence 5
No 53
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=3.2e-72 Score=627.55 Aligned_cols=396 Identities=17% Similarity=0.193 Sum_probs=336.0
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR---RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 305 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 305 (676)
.++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++.+|++++
T Consensus 27 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 100 (481)
T cd07141 27 INPATGEKICEVQEGD------KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKP 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 3467888899988777 8899999999999998 699999999999999999999999999999877665443
Q ss_pred HhhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHH
Q 005798 306 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 382 (676)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 382 (676)
.. ++. ..++..+++.+++++...+. .+...+. ..+...+.+++|+|||++|+|| ||. +.++++
T Consensus 101 ~~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 166 (481)
T cd07141 101 FS----KSY-------LVDLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKL 166 (481)
T ss_pred hH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHH
Confidence 21 111 12566677777776654332 2322211 1223457889999999999998 596 558999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHH
Q 005798 383 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 460 (676)
Q Consensus 383 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 460 (676)
++||++||+||+|||+.+|+|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++
T Consensus 167 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 167 APALACGNTVVLKPAEQTPLTALYLASLIKE----AGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5567888899999999999999999999988
Q ss_pred hcC----CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---
Q 005798 461 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 532 (676)
Q Consensus 461 ~a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 532 (676)
.++ +|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY-DEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 663 7999999999999999999999999999999999988 999999999999999 7999999988876522
Q ss_pred -------------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 005798 533 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 533 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 22 244321 12 33 5 2 368899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.|.||+| +++|++|+++||+.|+
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 477 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNG----RELGEYGLQEYTEVKT 477 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCC----ccchHHHHHHHhheEE
Confidence 999999999999999999999999999999999999999988777778899999999986 3569999999999999
Q ss_pred EEE
Q 005798 651 ILR 653 (676)
Q Consensus 651 v~~ 653 (676)
+++
T Consensus 478 v~~ 480 (481)
T cd07141 478 VTI 480 (481)
T ss_pred EEE
Confidence 875
No 54
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=4.2e-72 Score=623.42 Aligned_cols=395 Identities=19% Similarity=0.209 Sum_probs=334.3
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
++.+|+.++++...+ .+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++..|++++..
T Consensus 5 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 76 (451)
T cd07150 5 NPADGSVYARVAVGS------RQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYG-- 76 (451)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH--
Confidence 467899999988888 889999999999999999999999999999999999999999999998877654421
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++. .|+...++.+++++...+. .+...+. ...+...+.+++|+|||++|+|| +|. +.++++++||
T Consensus 77 --~a~--------~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~AL 144 (451)
T cd07150 77 --KAW--------FETTFTPELLRAAAGECRRVRGETLPS--DSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFAL 144 (451)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHH
Confidence 221 2455556666665543321 2222221 11244567889999999999998 586 5689999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
++||+||+|||+.+|.|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 145 aaGN~VilKps~~~p~t~~~l~~~~~~----ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 220 (451)
T cd07150 145 AAGNTVVLKPSEETPVIGLKIAEIMEE----AGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR 220 (451)
T ss_pred hcCCeEEEECCccCcHHHHHHHHHHHH----hCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999986 7 99999999996 567888888999999999999999999999876
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 221 ~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 299 (451)
T cd07150 221 HLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVY-DEFVKKFVARASKLKVGDPRDPDT 299 (451)
T ss_pred cCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999877 999999999999999 7999999999987632
Q ss_pred --------------------------EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHc
Q 005798 533 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 578 (676)
Q Consensus 533 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~ 578 (676)
++ +|+.....++ | | +++.+++||+||||++|++|+|+||||+++|+
T Consensus 300 ~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 379 (451)
T cd07150 300 VIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELAND 379 (451)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhC
Confidence 11 1222111223 5 2 35789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 579 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 579 ~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
++|||++||||+|.++++++++++++|.|+||+++... +.+||||.++||+| +++|++|+++||+.|++++
T Consensus 380 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 380 TEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFG----REGGEWSMEEFTELKWITV 451 (451)
T ss_pred CCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccC----cCCcHHHHHHhheeeEEeC
Confidence 99999999999999999999999999999999986544 56899999999886 3569999999999999863
No 55
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=6.2e-72 Score=622.13 Aligned_cols=398 Identities=22% Similarity=0.275 Sum_probs=334.8
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|.+++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 76 (453)
T cd07094 4 HNPYDGEVIGKVPADD------RADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3567889899987777 889999999999999999999999999999999999999999999998877654432
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccc--cccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKR--TELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
++ ..|+..+++.++++++..+. .+...+. +....+...+++++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (453)
T cd07094 77 ---DA--------RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLA 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 11 12455555555554432211 1221111 0011244567889999999999999 585 6789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
+||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|+| ++++++.|..||++|+|+||||+++|+.|++.
T Consensus 146 ~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~ 221 (453)
T cd07094 146 PAIATGCPVVLKPASKTPLSALELAKILVE----AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999995 56678888899999999999999999999988
Q ss_pred cC-CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 462 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 462 a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07094 222 AGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELY-DEFIEAFVAAVKKLKVGDPLDED 300 (453)
T ss_pred cCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 84 8999999999999999999999999999999999987 999999999999999 7999999999876532
Q ss_pred ---------------------------EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHH
Q 005798 533 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 577 (676)
Q Consensus 533 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN 577 (676)
++ +|+.....++ | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07094 301 TDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIAN 380 (453)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 22 2322222233 5 2 4689999999999999999999999999999
Q ss_pred ccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 578 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 578 ~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.|+||+| +++|++|+++|++.|+|++
T Consensus 381 ~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 381 STDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG----REGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred CCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccC----cCChHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999998654 467899999999986 3579999999999999863
No 56
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=3.3e-72 Score=626.01 Aligned_cols=392 Identities=15% Similarity=0.188 Sum_probs=334.5
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+++.++.+...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++.
T Consensus 18 ~nP~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 89 (467)
T TIGR01804 18 INPANQEVIATVAEAT------REDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTL-- 89 (467)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 4567888888887777 88999999999999999999999999999999999999999999999887665442
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
.+++ ..++..+++.++++++..+.. +...+. ......+.+++|+|||++|+|| ||. +.+++++||
T Consensus 90 --~~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (467)
T TIGR01804 90 --EETS-------VADMDDIADVFEFFAGLADKDGGEIIPL---PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPA 157 (467)
T ss_pred --HHHh-------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 1221 136677777777776544322 222211 1113457889999999999999 585 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 463 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~ 463 (676)
|++||+||+|||+.||.++..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++++.
T Consensus 158 LaaGN~VvlKps~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~ 233 (467)
T TIGR01804 158 LAAGNAMVFKPSEITPLTALKVAELMEE----AGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA 233 (467)
T ss_pred HhcCCEEEeeCCccCcHHHHHHHHHHHH----cCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 4678888899999999999999999999999873
Q ss_pred ---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 464 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 464 ---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 234 ~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 312 (467)
T TIGR01804 234 DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIK-EKFEARLVERTKRIKLGDGFDEA 312 (467)
T ss_pred hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999998876521
Q ss_pred ---------------------------EE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 005798 533 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 533 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 392 (467)
T TIGR01804 313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSED 392 (467)
T ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHH
Confidence 22 244321 12 23 5 2 468999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|.+|+++||+.|
T Consensus 393 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 393 EVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIG----RENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccC----CCChHHHHHHHhccC
Confidence 999999999999999999999999999999999999999998766677899999999986 356999999999875
No 57
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=6.7e-72 Score=625.93 Aligned_cols=397 Identities=20% Similarity=0.231 Sum_probs=337.7
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
.++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|++++++|++++++|++++.
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 91 (482)
T cd07119 18 INPANGEVIATVPEGT------AEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTL 91 (482)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567888889887777 7899999999999997 5999999999999999999999999999999887765432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
.++ ..|+...++.+++++...+ ..+...+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 92 ----~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 156 (482)
T cd07119 92 ----RES--------EIDIDDVANCFRYYAGLATKETGEVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLA 156 (482)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHH
Confidence 122 1256666666666654332 22322221 1344567899999999999998 585 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
+||++||+||+|||+.+|.|+..+++++.+ + +|+|++|+|++ ++++++.|..||++|+|+||||+++|+.|+++
T Consensus 157 ~ALaaGN~VilKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 232 (482)
T cd07119 157 PALAAGNTVVIKPSEVTPLTTIALFELIEE----AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRA 232 (482)
T ss_pred HHHhcCCEEEEECCccccHHHHHHHHHHHH----cCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55578888899999999999999999999987
Q ss_pred c---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-----
Q 005798 462 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 532 (676)
Q Consensus 462 a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 532 (676)
+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 233 aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~~~~ 311 (482)
T cd07119 233 AAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIH-DKFVAALAERAKKIKLGNGLD 311 (482)
T ss_pred HHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 7 38999999999999999999999999999999999977 999999999999999 7999999999877531
Q ss_pred -----------------------------EE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCC
Q 005798 533 -----------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 568 (676)
Q Consensus 533 -----------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~ 568 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|
T Consensus 312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 22 244321 12 23 5 2 3688999999999999999999
Q ss_pred HHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeE
Q 005798 569 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 648 (676)
Q Consensus 569 ~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~ 648 (676)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|++|+++||+.
T Consensus 392 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~~ 467 (482)
T cd07119 392 EEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIG----RELGPTGLEEYQET 467 (482)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhce
Confidence 99999999999999999999999999999999999999999987666677899999999886 35699999999999
Q ss_pred EEEEEcC
Q 005798 649 RWILRGN 655 (676)
Q Consensus 649 k~v~~~~ 655 (676)
|++++..
T Consensus 468 k~v~~~~ 474 (482)
T cd07119 468 KHININL 474 (482)
T ss_pred EEEEEec
Confidence 9998864
No 58
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=8.8e-72 Score=620.50 Aligned_cols=398 Identities=20% Similarity=0.213 Sum_probs=334.2
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
++.+|+.++++...+ .+|+++++++|++||+.|+ ++|.++|.++|++++++|++++++|++++..|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (459)
T cd07089 3 NPATEEVIGTAPDAG------AADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM- 75 (459)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 466888889887777 8899999999999999999 99999999999999999999999999998877655431
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-ccc-ccccc-cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQI-LKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
++.. .|+...++.++++++..+.. +.. .+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 76 ---~~~~-------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~ 145 (459)
T cd07089 76 ---TARA-------MQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLA 145 (459)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHH
Confidence 1111 24455555555554332211 111 11100 01234567899999999999998 585 5689999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
+||++||+||+|||+.+|.++..+.+++.+ + +|+|+||+|++ +++++..|..||++++|+||||+.+|+.|++.
T Consensus 146 ~AL~aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~ 221 (459)
T cd07089 146 PALAAGNTVVLKPAPDTPLSALLLGEIIAE----TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQ 221 (459)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55578888899999999999999999999987
Q ss_pred c---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-----
Q 005798 462 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 532 (676)
Q Consensus 462 a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 532 (676)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 222 aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~ 300 (459)
T cd07089 222 AAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY-DEVVEALAAAFEALPVGDPAD 300 (459)
T ss_pred HHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 7 38999999999999999999999999999999999977 999999999999999 7999999999887632
Q ss_pred -----------------------------EE-ecCccc----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 005798 533 -----------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 533 -----------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 301 ~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 380 (459)
T cd07089 301 PGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDD 380 (459)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHH
Confidence 12 243321 12 33 5 2 468899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|++|+++||+.|+
T Consensus 381 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~l~~ft~~k~ 456 (459)
T cd07089 381 EAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLG----RENGIEGLEEFLETKS 456 (459)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCC----CCchHHHHHHhhceeE
Confidence 999999999999999999999999999999999999999998866777899999999886 3569999999999999
Q ss_pred EEE
Q 005798 651 ILR 653 (676)
Q Consensus 651 v~~ 653 (676)
|.+
T Consensus 457 v~~ 459 (459)
T cd07089 457 IAY 459 (459)
T ss_pred EeC
Confidence 864
No 59
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=1.8e-71 Score=625.20 Aligned_cols=426 Identities=19% Similarity=0.214 Sum_probs=348.3
Q ss_pred chHHHHHHHHHHHHcCC----cEEEEeCC-----CcchHHHHHh-CCceeeEEecCCccccchhhHHHHHHHHHHHHHHH
Q 005798 199 GMTAKVNAAYCAACAGI----PVVITSGF-----AMDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL 268 (676)
Q Consensus 199 gM~~K~~aa~~a~~~gv----~v~I~~g~-----~~~~i~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w 268 (676)
-|..+++.++...+... +.+| +|. ..-.+.++.+ |+.++++...+ .+++++++++|++||+.|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~i-~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~------~~~v~~av~~A~~A~~~W 85 (512)
T cd07124 13 ENRAAFRAALARVREELGREYPLVI-GGKEVRTEEKIESRNPADPSEVLGTVQKAT------KEEAEAAVQAARAAFPTW 85 (512)
T ss_pred HHHHHHHHHHHHHHhhcccccceeE-CCEEecCCCeEEeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHH
Confidence 45566666666555442 2333 442 1123467786 88889888877 889999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-cccccc
Q 005798 269 QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILK 347 (676)
Q Consensus 269 ~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 347 (676)
+.+|.++|.++|++++++|++++++|++++.+|++++.. ++. .|+...++.+++++...+. .+...+
T Consensus 86 ~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~--------~ev~~~i~~~~~~~~~~~~~~~~~~~ 153 (512)
T cd07124 86 RRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWA----EAD--------ADVAEAIDFLEYYAREMLRLRGFPVE 153 (512)
T ss_pred hcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 999999999999999999999999999998877655431 221 2455555555555543221 122221
Q ss_pred ccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCce
Q 005798 348 RTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLI 424 (676)
Q Consensus 348 ~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~ 424 (676)
. ..+...+++++|+|||++|+|| +|. +.+++++|||++||+||+|||+.||+++..+++++.+ + +|+|+|
T Consensus 154 ~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv 226 (512)
T cd07124 154 M---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE----AGLPPGVV 226 (512)
T ss_pred C---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCCCce
Confidence 1 1234567889999999999999 586 5689999999999999999999999999999999986 7 999999
Q ss_pred EEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---------CCCEEeecCCcceEEEcCCCCHHHHHHHHHHh
Q 005798 425 GLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICHVYVDKSANLDVAKNIVIDA 494 (676)
Q Consensus 425 ~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---------~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~ 494 (676)
|+|+| +.++++.|..||++|+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.|++.++++
T Consensus 227 ~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~ 306 (512)
T cd07124 227 NFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRS 306 (512)
T ss_pred EEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHH
Confidence 99996 567888899999999999999999999999865 36999999999999999999999999999999
Q ss_pred cCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---------------------------------EE-ecCcc
Q 005798 495 KIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------------GL-FGGPR 539 (676)
Q Consensus 495 ~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------------------------------~~-~g~~~ 539 (676)
+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+ ++ +|+..
T Consensus 307 ~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~ 385 (512)
T cd07124 307 AFGFQGQKCSACSRVIVHESVY-DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEV 385 (512)
T ss_pred HHhhCCCccccceEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCcc
Confidence 999988 999999999999999 7999999999886532 11 23322
Q ss_pred c----ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeE
Q 005798 540 A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 607 (676)
Q Consensus 540 ~----~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v 607 (676)
. .++ + | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|
T Consensus 386 ~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 465 (512)
T cd07124 386 LELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNL 465 (512)
T ss_pred CCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceE
Confidence 1 233 3 5 2 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEEEEEEc
Q 005798 608 FHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 608 ~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 654 (676)
+||+.... .+..||||.+.||+|. +++|++|+++||+.|+|.++
T Consensus 466 ~vN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 466 YANRKITGALVGRQPFGGFKMSGTGS---KAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred EECCCCCCCCCCCCCCCccccccCCC---ccCcHHHHHHhccEEEEEEe
Confidence 99987543 2458999999998862 23579999999999999875
No 60
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=1.4e-71 Score=625.40 Aligned_cols=398 Identities=17% Similarity=0.182 Sum_probs=333.2
Q ss_pred HHHH-hCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.++. +++.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|+++++.|.+++..
T Consensus 51 ~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 124 (511)
T TIGR01237 51 INPCDPSEVVGKVGKAS------VEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIP 124 (511)
T ss_pred ECCCCCCcEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHH
Confidence 4566 478888887777 889999999999999999999999999999999999999999999998876654321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..|+...++.++++++..+. .+...+. ...+...+++++|+|||++|+|| +|. +.+++++|
T Consensus 125 ----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ 190 (511)
T TIGR01237 125 ----EA--------DAEVAEAIDFCEYYAREMERLAGQGVNL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVA 190 (511)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 11 12455566666665543221 1221111 11234567889999999999999 585 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.||+++..+++++.+ + +|+|+||+|+| +.++++.|..||++++|+||||+++|+.|++.+
T Consensus 191 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 266 (511)
T TIGR01237 191 PIVTGNCVVLKPAETSTVIAAKIVEILIE----AGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDA 266 (511)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 567888899999999999999999999998765
Q ss_pred C---------CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc
Q 005798 463 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 532 (676)
Q Consensus 463 ~---------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~ 532 (676)
. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 267 a~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 267 AKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVY-DAVVERFVEATRSLNV 345 (511)
T ss_pred hcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHH-HHHHHHHHHHHHhCCC
Confidence 3 6999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ---------------------------------E-EecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCC
Q 005798 533 ---------------------------------G-LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 568 (676)
Q Consensus 533 ---------------------------------~-~~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~ 568 (676)
+ +.|+... .+ ++ | | ++|++++||+||||++|++|+|
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 1 1233211 12 23 5 2 4689999999999999999999
Q ss_pred HHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcce
Q 005798 569 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLL 646 (676)
Q Consensus 569 ~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft 646 (676)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+..||||.+.||+|. +++|++|+++||
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~~~~ 502 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS---KAGGPDYLLQFM 502 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC---cCCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999987543 2457999999999862 235899999999
Q ss_pred eEEEEEEc
Q 005798 647 TTRWILRG 654 (676)
Q Consensus 647 ~~k~v~~~ 654 (676)
+.|+++.+
T Consensus 503 ~~k~v~~~ 510 (511)
T TIGR01237 503 QPKTVTEN 510 (511)
T ss_pred ceEEEEEe
Confidence 99999765
No 61
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=6.2e-72 Score=620.88 Aligned_cols=393 Identities=21% Similarity=0.240 Sum_probs=335.1
Q ss_pred HHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 231 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 231 ~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
|.+++.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 4 P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (454)
T cd07118 4 PAHGVVVARYAEGT------VEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPIS- 76 (454)
T ss_pred CCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 56788899998888 88999999999999985 9999999999999999999999999999998876654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+..+++.+++++...+. .+...+. ...+...++.|+|+|||++|+|| ||. +.++++++|
T Consensus 77 ---~a--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~A 143 (454)
T cd07118 77 ---QA--------RGEIEGAADLWRYAASLARTLHGDSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFA 143 (454)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHH
Confidence 21 23666777777766643221 1222111 11233457889999999999998 596 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 462 (676)
|++||+||+|||+.+|.++..+++++.+ + +|+|+||+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 144 LaaGN~Vi~Kps~~~p~~~~~l~~~~~~----aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 219 (454)
T cd07118 144 LAAGCTVVVKPSEFTSGTTLMLAELLIE----AGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA 219 (454)
T ss_pred HhcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999995 556788888999999999999999999999876
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 220 ~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~g~p~~~~ 298 (454)
T cd07118 220 RNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIA-DAFVAAVVARSRKVRVGDPLDPE 298 (454)
T ss_pred hcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCC
Confidence 38999999999999999999999999999999999977 999999999999999 7999999999886532
Q ss_pred ---------------------------EE-ecCccc---cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 005798 533 ---------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 533 ---------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi 573 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||
T Consensus 299 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai 378 (454)
T cd07118 299 TKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAI 378 (454)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHH
Confidence 12 233321 12 23 5 2 368899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||.+.||+| +++|++|+++||+.|+++
T Consensus 379 ~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 379 ALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIG----RELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999998777778899999999886 356999999999999975
No 62
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=8.1e-72 Score=624.32 Aligned_cols=396 Identities=17% Similarity=0.186 Sum_probs=337.0
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ--ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
.+|.+++.++++...+ .++++.++++|++||+.|+ .+|.++|.++|++++++|++++++|++++.+|++++.
T Consensus 24 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 97 (476)
T cd07091 24 INPATEEVICQVAEAD------EEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPL 97 (476)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567888899888777 7899999999999999854 9999999999999999999999999999887664432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
. +.. ..|+..+++.+++++++.+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 98 ~----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 163 (476)
T cd07091 98 E----ESA-------KGDVALSIKCLRYYAGWADKIQGKTIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA 163 (476)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence 1 111 13667777777777654332 2332221 1344567889999999999999 585 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
|||++||+||+|||+.+|.++..+++++.+ + +|+|+||+|++ +.++++.|..||++|+|+||||+++|+.|++.
T Consensus 164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~ 239 (476)
T cd07091 164 PALAAGNTVVLKPAEQTPLSALYLAELIKE----AGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEA 239 (476)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56678888899999999999999999999987
Q ss_pred cC----CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----
Q 005798 462 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 532 (676)
Q Consensus 462 a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 532 (676)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 240 aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~L~~~~~~~~~g~p~ 318 (476)
T cd07091 240 AAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY-DEFVEKFKARAEKRVVGDPF 318 (476)
T ss_pred HHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHH-HHHHHHHHHHHhhCCCCCCC
Confidence 63 7999999999999999999999999999999999977 999999999999999 7999999999887532
Q ss_pred ------------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 319 ~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07091 319 DPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDE 398 (476)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHH
Confidence 22 233221 12 33 5 2 3678999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.+.||+| +++|++|+++||+.|++
T Consensus 399 ai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~~ 474 (476)
T cd07091 399 VIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFG----RELGEEGLEEYTQVKAV 474 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhhceeEE
Confidence 99999999999999999999999999999999999999998777778999999999886 35699999999999998
Q ss_pred EE
Q 005798 652 LR 653 (676)
Q Consensus 652 ~~ 653 (676)
.+
T Consensus 475 ~~ 476 (476)
T cd07091 475 TI 476 (476)
T ss_pred eC
Confidence 53
No 63
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=1.6e-71 Score=619.67 Aligned_cols=398 Identities=18% Similarity=0.177 Sum_probs=331.7
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+++.++++...+ .+|+++++++|++|| +.++..+|.++|++++++|++++++|++++++|++++..
T Consensus 22 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~- 91 (472)
T TIGR03250 22 RYPYNGTVVGTVPKAS------VDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKK- 91 (472)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 3467888899988877 889999999999886 468999999999999999999999999998877655421
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccc-ccccccccc--ccCCCcEEEEEeece-eEEEEEcCC-Chh-hHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQIA 382 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~~ 382 (676)
++ ..|+...++.+++++.... ..+...+.. ....+...+++++|+ |||++|+|| ||. +.++++
T Consensus 92 ---~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~ 160 (472)
T TIGR03250 92 ---DS--------LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKI 160 (472)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHH
Confidence 21 2356667777777664332 222221100 001234567889998 999999999 585 667999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHH
Q 005798 383 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 460 (676)
Q Consensus 383 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 460 (676)
++||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|+| +.+.++.|..||++|+|+||||+++|+.|++
T Consensus 161 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 161 APAIATNNRMVVKPSEKTPLSALYLADILYE----AGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5667888888999999999999999999998
Q ss_pred hcC-CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 461 STK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 461 ~a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
.+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 237 ~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~ 315 (472)
T TIGR03250 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVA-DRFTELLVEKTRAWRYGDPMDP 315 (472)
T ss_pred HhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 774 8999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred ----------------------------EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHH
Q 005798 533 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 576 (676)
Q Consensus 533 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~a 576 (676)
++ +|+.....++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 395 (472)
T TIGR03250 316 SVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRIS 395 (472)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 11 1332222233 5 2 468999999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEEEEEcC
Q 005798 577 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 577 N~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 655 (676)
|+++|||++||||+|.+++.++++++++|+||||+.+... +.+||||.|.||+|. +++|++|+++||+.|++++++
T Consensus 396 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~---~~g~~~~l~~ft~~k~i~~~~ 472 (472)
T TIGR03250 396 NSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY---KEGVQEAMKSFTNLKTYSLPW 472 (472)
T ss_pred hCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC---CCChHHHHHHhhceEEEEEeC
Confidence 9999999999999999999999999999999999875443 458999999999862 234689999999999998753
No 64
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=2.1e-71 Score=624.34 Aligned_cols=399 Identities=18% Similarity=0.188 Sum_probs=330.2
Q ss_pred HHHHH-hCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-cHHHHHHHHHHHHHHH
Q 005798 228 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEA-NESLIKVENEADVAAA 305 (676)
Q Consensus 228 i~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~~~~l~~~~~~d~~~~ 305 (676)
+.++. +|+.++++...+ .+|+++++++|++||+.|+++|..+|.++|++++++|++ ++++|++++..|++++
T Consensus 50 v~~P~~tg~~l~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~ 123 (522)
T cd07123 50 QVMPHDHAHVLATYHYAD------AALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKN 123 (522)
T ss_pred EECCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCC
Confidence 45677 488899888888 889999999999999999999999999999999999996 8999999887665443
Q ss_pred HhhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeece-eEEEEEcCC-Chh-hHHHH
Q 005798 306 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQI 381 (676)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~ 381 (676)
.. ++. ..++...++.+++++...+. .+...+. ...+...+++++|+ |||++|+|| ||. +..++
T Consensus 124 ~~----~a~-------~~~v~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~ 190 (522)
T cd07123 124 VW----QAE-------IDAACELIDFLRFNVKYAEELYAQQPLS--SPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLA 190 (522)
T ss_pred HH----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCceEEEECCcccHHHHHHHH
Confidence 21 111 12455556666665543321 1221111 11234567889999 999999999 585 56789
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005798 382 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 459 (676)
Q Consensus 382 ~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 459 (676)
++||| +||+||+|||+.||+++..+++++.+ + ||+|+||+|+| ++++++.|..||+||+|+||||+++|+.|+
T Consensus 191 ~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~ 265 (522)
T cd07123 191 GAPAL-MGNVVLWKPSDTAVLSNYLVYKILEE----AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLW 265 (522)
T ss_pred HHHHH-hCCEEEEECCCCCCHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999 69999999999999999999999986 7 99999999996 556888899999999999999999999999
Q ss_pred HhcC---C------CEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHh
Q 005798 460 ESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 529 (676)
Q Consensus 460 ~~a~---~------~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~ 529 (676)
+.++ + |+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|++++++
T Consensus 266 ~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~ 344 (522)
T cd07123 266 KQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW-PEVKERLLEELKE 344 (522)
T ss_pred HHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHhh
Confidence 8773 4 899999999999999999999999999999999987 999999999999999 7999999999886
Q ss_pred cCc-----------------------------------EE-ecCccc--ccc-c-c-C-----CCCCcccccccCceEEE
Q 005798 530 EGV-----------------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTV 563 (676)
Q Consensus 530 ~~~-----------------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~i 563 (676)
+.+ ++ +|+... .++ + | | ++|++++||+||||++|
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V 424 (522)
T cd07123 345 IKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTV 424 (522)
T ss_pred CccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEE
Confidence 521 22 233221 233 3 6 2 46899999999999999
Q ss_pred EEeC--CHHHHHHHHHccC-CCceeEEEecCHHHHHHHHhcc--CeeeEEEcCCCCC--CCCCcccCccccccccccccc
Q 005798 564 EIVD--DVRAAIDHIHQHG-SAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHA 636 (676)
Q Consensus 564 ~~~~--~~deAi~~aN~~~-~GL~a~vft~d~~~a~~~~~~l--~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~ 636 (676)
++|+ |+||||+++|++. |||++||||+|.+++.++++++ ++|+|+||+.... .+..||||.+.||+|+ ++
T Consensus 425 ~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg---~~ 501 (522)
T cd07123 425 YVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND---KA 501 (522)
T ss_pred EEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc---cc
Confidence 9998 4799999999995 9999999999999999999996 5999999987543 3468999999999852 35
Q ss_pred ccccchhcceeEEEEEEc
Q 005798 637 RGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 637 ~g~~g~~~ft~~k~v~~~ 654 (676)
+|++++++|++.|++...
T Consensus 502 ~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 502 GSPLNLLRWVSPRTIKET 519 (522)
T ss_pred CCHHHHHHhcceEEEEEe
Confidence 689999999999998763
No 65
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.2e-71 Score=618.08 Aligned_cols=394 Identities=21% Similarity=0.225 Sum_probs=333.0
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 3 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (457)
T cd07108 3 NPATGQVIGEVPRSR------AADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALR-- 74 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcH--
Confidence 467888899987777 889999999999999999999999999999999999999999999999887765420
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
.++ ..|+..+++.+++++..... .+...+. ..+...+..++|+|||++|+|| ||. +.++++++||
T Consensus 75 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 142 (457)
T cd07108 75 -TQA--------RPEAAVLADLFRYFGGLAGELKGETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPAL 142 (457)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHH
Confidence 111 13566666667666643321 1222221 1234567889999999999999 585 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 463 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-- 463 (676)
++||+||+|||+.+|.++..+++++.+ ++|+|++|+|+| +.++++.|..||++|+|+||||+.+|+.|++.++
T Consensus 143 aaGN~VVlKps~~~p~~~~~l~~~~~~----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~ 218 (457)
T cd07108 143 VAGNTVVLKAAEDAPLAVLLLAEILAQ----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADR 218 (457)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHH----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999985 499999999995 5567888888999999999999999999998773
Q ss_pred -CCEEeecCCcceEEEcCCCCHHHHHHHHHHhc-CCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 464 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 464 -~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~-~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
+|+++|||||||+||++|||++.|++.+++++ |.|+| +|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~vg~p~~~~~ 297 (457)
T cd07108 219 LIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIY-DAFLEKLVAKLSKLKIGDPLDEAT 297 (457)
T ss_pred CCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 89999999999999999999999999999995 98877 999999999999999 7999999998876521
Q ss_pred ---------------------------EE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 005798 533 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 533 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+|
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 377 (457)
T cd07108 298 DIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDED 377 (457)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHH
Confidence 22 233221 12 23 5 2 468899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccc-hhcceeEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVG-VEGLLTTR 649 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g-~~~ft~~k 649 (676)
|||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.+.||+|. ++|.++ +++||+.|
T Consensus 378 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~f~~~k 453 (457)
T cd07108 378 EVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGR----EASLEGMLEHFTQKK 453 (457)
T ss_pred HHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCC----CccchhHHHHhhceE
Confidence 9999999999999999999999999999999999999999987666778999999998863 457766 69999999
Q ss_pred EEE
Q 005798 650 WIL 652 (676)
Q Consensus 650 ~v~ 652 (676)
++.
T Consensus 454 ~i~ 456 (457)
T cd07108 454 TVN 456 (457)
T ss_pred EEe
Confidence 985
No 66
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=4.2e-71 Score=618.51 Aligned_cols=396 Identities=17% Similarity=0.127 Sum_probs=328.5
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 20 ~~P~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 92 (487)
T PRK09457 20 RNPVSGEVLWQGNDAT------AAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLW- 92 (487)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH-
Confidence 4577899999988777 889999999999999999999999999999999999999999999998876654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccc-ccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++. .|+..+++.++++++.. +..+..... ..+...+++|+|+|||++|+|| ||. +..+++++|
T Consensus 93 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 158 (487)
T PRK09457 93 ---EAA--------TEVTAMINKIAISIQAYHERTGEKRSE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 158 (487)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHH
Confidence 211 24555555555443321 112221111 1233457889999999999999 585 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.||+|+..+++++.+ + +|+|+||+|+++.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 159 LaaGN~VvlKPs~~tp~t~~~l~~l~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 234 (487)
T PRK09457 159 LLAGNTVVFKPSELTPWVAELTVKLWQQ----AGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAG 234 (487)
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999999999986 7 99999999997656788888999999999999999999999864
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccC-ChhHHHHHHHHHHhcCc------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLA-CNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~-d~~f~~~l~~~~~~~~~------ 532 (676)
.++++||||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| | +|+++|+++++++++
T Consensus 235 ~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d-~f~~~l~~~~~~~~vG~p~~~ 313 (487)
T PRK09457 235 QPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGD-AFLARLVAVAKRLTVGRWDAE 313 (487)
T ss_pred cCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHH-HHHHHHHHHHhcCcCCCCCcC
Confidence 26789999999999999999999999999999999987 999999999999996 6 999999998876532
Q ss_pred -----------------------------EE-ecCccc--c-ccc-c-C----CCCCcccccccCceEEEEEeCCHHHHH
Q 005798 533 -----------------------------GL-FGGPRA--S-KLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 533 -----------------------------~~-~g~~~~--~-~~~-p-v----~~~~~~~eE~FGPVl~i~~~~~~deAi 573 (676)
++ .|+... . .++ | | ++|++++||+||||++|++|+|+||||
T Consensus 314 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai 393 (487)
T PRK09457 314 PQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAI 393 (487)
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHHH
Confidence 11 122111 1 233 5 2 368899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+|+ +.| ....+|++.|++.
T Consensus 394 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g-~~~~~~~~~k~~~ 468 (487)
T PRK09457 394 RLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR----PSA-YYAADYCAYPMAS 468 (487)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCC----CCc-hhHhhheeeeEEE
Confidence 999999999999999999999999999999999999987543 3568999999999863 446 4446699999998
Q ss_pred EcC
Q 005798 653 RGN 655 (676)
Q Consensus 653 ~~~ 655 (676)
+..
T Consensus 469 ~~~ 471 (487)
T PRK09457 469 LES 471 (487)
T ss_pred Eec
Confidence 864
No 67
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=2.4e-71 Score=623.49 Aligned_cols=400 Identities=19% Similarity=0.200 Sum_probs=332.1
Q ss_pred HHHHHh-CCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHHHHHH
Q 005798 228 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAA 305 (676)
Q Consensus 228 i~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~d~~~~ 305 (676)
+.++.+ ++.++++...+ .+|+++++++|++||+.|+.+|..+|.++|++++++|+ +++++|+++++.|++|.
T Consensus 50 ~~nP~t~g~~i~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~ 123 (533)
T TIGR01236 50 QVQPHNHQAVLAKATNAT------EEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKN 123 (533)
T ss_pred EECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCc
Confidence 356775 77888888888 88999999999999999999999999999999999999 59999999887766543
Q ss_pred HhhchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeece-eEEEEEcCCC-hh-hHHHH
Q 005798 306 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPL-GVLLIVFESR-PD-ALVQI 381 (676)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~~-P~-~~~~~ 381 (676)
.. ++. .+++...++.+++++...+.. +...+. ...+...++.++|+ |||++|+||| |. +..++
T Consensus 124 ~~----~a~-------~e~v~~~i~~~~~~a~~a~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~ 190 (533)
T TIGR01236 124 VY----QAE-------IDAVAELIDFFRFNVKYARELYEQQPSE--SAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLP 190 (533)
T ss_pred HH----HHh-------HhHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCCEEEEEeCCchHHHHHHHH
Confidence 21 111 123556667777766543222 221110 01234567889999 9999999994 85 56789
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005798 382 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 459 (676)
Q Consensus 382 ~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 459 (676)
+++|| +||+||+|||++||+++..+++++.+ + ||+|+||+|+| +.++++.|..||+|++|+||||+++|+.|+
T Consensus 191 ~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 191 GAPAL-MGNTVIWKPSITATLSNYLTMRILEE----AGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHH-hCCeEEEECCCcCCHHHHHHHHHHHh----cCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999 89999999999999999999999986 7 99999999996 567888888999999999999999999999
Q ss_pred HhcC---C------CEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHh
Q 005798 460 ESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 529 (676)
Q Consensus 460 ~~a~---~------~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~ 529 (676)
+.++ + ++++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|+|||++|| |+|+++|++++++
T Consensus 266 ~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVW-PRFKDELLAELAE 344 (533)
T ss_pred HHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHH-HHHHHHHHHHHhc
Confidence 8763 3 499999999999999999999999999999999987 999999999999999 7999999999886
Q ss_pred cCc------------------------------------EE-ecCccc--cccc--c-C-----CCCCcccccccCceEE
Q 005798 530 EGV------------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCT 562 (676)
Q Consensus 530 ~~~------------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~ 562 (676)
+.+ ++ +|+... .++| | | ++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 521 22 233222 1333 5 2 4689999999999999
Q ss_pred EEEeCC--HHHHHHHH-HccCCCceeEEEecCHHHHHHHHhccC--eeeEEEcCCCCCC--CCCcccCcccccccccccc
Q 005798 563 VEIVDD--VRAAIDHI-HQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTRFC--DGARFGLGAEVGISTSRIH 635 (676)
Q Consensus 563 i~~~~~--~deAi~~a-N~~~~GL~a~vft~d~~~a~~~~~~l~--~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~ 635 (676)
|++|+| +||||+++ |+++|||++||||+|.+++.+++++++ +|+|+||+..... +..||||.+.||+|. +
T Consensus 425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~ 501 (533)
T TIGR01236 425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND---K 501 (533)
T ss_pred EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc---c
Confidence 999998 59999999 899999999999999999999999977 9999999765432 578999999998862 3
Q ss_pred cccccchhcceeEEEEEEcC
Q 005798 636 ARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 636 ~~g~~g~~~ft~~k~v~~~~ 655 (676)
++|++|+++|++.|++....
T Consensus 502 ~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 502 AGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cCCHHHHHHhcceEEEEEEc
Confidence 56899999999999987754
No 68
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=2.5e-71 Score=612.11 Aligned_cols=374 Identities=17% Similarity=0.206 Sum_probs=317.2
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHH
Q 005798 254 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 333 (676)
Q Consensus 254 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 333 (676)
|++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|.+++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~ev~~~~~~~~ 68 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIA----EA--------RAEVEKCAWICR 68 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999998877654431 22 135556666666
Q ss_pred HHhcccccc-c-ccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005798 334 ILADMEEPI-G-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 409 (676)
Q Consensus 334 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 409 (676)
+++...+.. + ...+ .++...+++++|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|+++..|++
T Consensus 69 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~ 144 (429)
T cd07100 69 YYAENAEAFLADEPIE----TDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144 (429)
T ss_pred HHHHHHHHhcCCeecc----CCCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHH
Confidence 655433211 1 1111 1133467889999999999999 585 567899999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCCCCHH
Q 005798 410 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 485 (676)
Q Consensus 410 l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~ 485 (676)
++.+ + +|+|++|+|++..+.+..|..||+|++|+||||+++|+.|++.++ ||+++|||||||+||++|||+|
T Consensus 145 ~l~~----aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~ 220 (429)
T cd07100 145 LFRE----AGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLD 220 (429)
T ss_pred HHHH----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHH
Confidence 9986 7 999999999964345566778999999999999999999998873 8999999999999999999999
Q ss_pred HHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------------------------------
Q 005798 486 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 532 (676)
Q Consensus 486 ~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------------------------------- 532 (676)
.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 221 ~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 299 (429)
T cd07100 221 KAVKTAVKGRLQNAGQSCIAAKRFIVHEDVY-DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAA 299 (429)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999988 999999999999999 7999999999886532
Q ss_pred --EE-ecCcccc--c-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHH
Q 005798 533 --GL-FGGPRAS--K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 599 (676)
Q Consensus 533 --~~-~g~~~~~--~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~ 599 (676)
++ +|+.... + ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 300 Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 379 (429)
T cd07100 300 GATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA 379 (429)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 22 2443221 2 33 5 2 36889999999999999999999999999999999999999999999999999
Q ss_pred hccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 600 CQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 600 ~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+++++|.|+||++....+.+||||.+.||+| +++|++|+++||+.|+++
T Consensus 380 ~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 380 RRLEAGMVFINGMVKSDPRLPFGGVKRSGYG----RELGRFGIREFVNIKTVW 428 (429)
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCccccccC----CcchHHHHHHhcceeEEe
Confidence 9999999999998766677899999999886 356999999999999985
No 69
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=5.1e-71 Score=619.79 Aligned_cols=398 Identities=16% Similarity=0.187 Sum_probs=333.1
Q ss_pred HHHH-hCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.++. +|+.++++...+ .+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++..|.+++..
T Consensus 37 ~~P~~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 110 (500)
T cd07083 37 VSPFAPSEVVGTTAKAD------KAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWV 110 (500)
T ss_pred eCCCCCCcEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHH
Confidence 4565 588888888777 889999999999999999999999999999999999999999999998877654321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..|+..+++.++++++.... .+..... ....+...++.++|+|||++|+|| ||. +.++++++
T Consensus 111 ----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ 177 (500)
T cd07083 111 ----EA--------IDDVAEAIDFIRYYARAALRLRYPAVEV-VPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVA 177 (500)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-CCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHH
Confidence 11 23566666666666543321 1211100 001234457789999999999999 595 66799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.||+|+..+++++.+ + +|+|+||+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 178 ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~a 253 (500)
T cd07083 178 PVAVGNTVIAKPAEDAVVVGYKVFEIFHE----AGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAA 253 (500)
T ss_pred HHHcCCeEEEeCCCcchHHHHHHHHHHHH----cCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 667888888999999999999999999998876
Q ss_pred C---------CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc
Q 005798 463 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 532 (676)
Q Consensus 463 ~---------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~ 532 (676)
+ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 254 a~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~ 332 (500)
T cd07083 254 ARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY-EPVLERLLKRAERLSV 332 (500)
T ss_pred hhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHcCCC
Confidence 2 8999999999999999999999999999999999977 999999999999999 7999999999876532
Q ss_pred ---------------------------------E-EecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeC-
Q 005798 533 ---------------------------------G-LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD- 567 (676)
Q Consensus 533 ---------------------------------~-~~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~- 567 (676)
+ ++|+... .+ ++ | | +++++++||+||||++|++|+
T Consensus 333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d 412 (500)
T cd07083 333 GPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKD 412 (500)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCC
Confidence 1 1233221 12 33 5 2 368899999999999999999
Q ss_pred -CHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC--CCCcccCcccccccccccccccccchhc
Q 005798 568 -DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEG 644 (676)
Q Consensus 568 -~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ 644 (676)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++.... +.+||||.+.||+|. +++|++|+++
T Consensus 413 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~~ 489 (500)
T cd07083 413 DDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA---KTGGPHYLRR 489 (500)
T ss_pred CCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC---cccCHHHHHH
Confidence 9999999999999999999999999999999999999999999875543 457999999998862 2458999999
Q ss_pred ceeEEEEEE
Q 005798 645 LLTTRWILR 653 (676)
Q Consensus 645 ft~~k~v~~ 653 (676)
||+.|++..
T Consensus 490 ~~~~k~~~~ 498 (500)
T cd07083 490 FLEMKAVAE 498 (500)
T ss_pred hhheeEEEE
Confidence 999999875
No 70
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=2.8e-71 Score=618.32 Aligned_cols=391 Identities=19% Similarity=0.191 Sum_probs=329.8
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 19 ~~P~~~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 91 (466)
T cd07138 19 INPATEEVIGTVPLGT------AADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPIT- 91 (466)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4567888899988777 889999999999999999999999999999999999999999999998776654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++. ..++...++.++++++..+...... . ....+.+++|+|||++|+|| ||. +.+++++|||
T Consensus 92 ---~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 92 ---LAR-------AAQVGLGIGHLRAAADALKDFEFEE-----R-RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHhhhhccccc-----c-CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 111 1144455555555554322211100 0 12346789999999999998 594 6789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 463 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 463 (676)
++||+||+|||+.+|+|+..+++++.+ + +|+|+||+|++ ++++++.|..||+|++|+||||+++|+.|++.+.
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 231 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDE----AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999986 7 99999999996 5668888999999999999999999999998873
Q ss_pred --CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC---------
Q 005798 464 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 531 (676)
Q Consensus 464 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~--------- 531 (676)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 232 ~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 310 (466)
T cd07138 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRY-AEAEEIAAAAAEAYVVGDPRDPAT 310 (466)
T ss_pred cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999977 999999999999999 799999999887652
Q ss_pred -------------------------cEE-ecCcc-c----ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 005798 532 -------------------------VGL-FGGPR-A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 572 (676)
Q Consensus 532 -------------------------~~~-~g~~~-~----~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deA 572 (676)
.++ +|+.. . .++ + | | +++++++||+||||++|++|+|+|||
T Consensus 311 ~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~ea 390 (466)
T cd07138 311 TLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEA 390 (466)
T ss_pred cCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHH
Confidence 122 23321 1 132 3 5 2 36889999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 573 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 573 i~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
|+++|+++|||++||||+|.+++.++++++++|+|+||+.. ..+.+||||.+.||+| +++|++|+++||+.|+++
T Consensus 391 i~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 391 IAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNG----REWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCC----ccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999999999999999863 4567899999999876 356999999999999874
No 71
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=2.5e-71 Score=620.43 Aligned_cols=397 Identities=18% Similarity=0.181 Sum_probs=336.6
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
.++.+|+.++++...+ .+|+++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|++++.
T Consensus 40 ~nP~tg~~i~~v~~~~------~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 113 (494)
T PRK09847 40 VDPVTQAPLAKIARGK------SVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPI 113 (494)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4577889999988777 8899999999999997 5999999999999999999999999999998877665432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 383 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 383 (676)
. ++. ..|+..+++.++++++..+. .++..+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 114 ~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (494)
T PRK09847 114 R----HSL-------RDDIPGAARAIRWYAEAIDKVYGEVATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLG 179 (494)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEecceeEEEEECCCccHHHHHHHHHH
Confidence 1 111 12566667777776654332 2332221 1233457889999999999999 596 5789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 384 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 384 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
|||++||+||+|||+.+|.++..+++++.+ + +|+|+||+|++ +.+.+..|..||++|+|+||||+.+|+.|++.
T Consensus 180 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~ 255 (494)
T PRK09847 180 PALAAGNSVILKPSEKSPLSAIRLAGLAKE----AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD 255 (494)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999886 7 99999999996 56677878889999999999999999999886
Q ss_pred c----CCCEEeecCCcceEEEcCCC-CHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---
Q 005798 462 T----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 532 (676)
Q Consensus 462 a----~~~~~lElGGk~p~iV~~dA-Dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 532 (676)
+ .+|+++|||||||+||++|+ |+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 256 aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 334 (494)
T PRK09847 256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA-DEFLALLKQQAQNWQPGHP 334 (494)
T ss_pred hhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 5 38999999999999999997 999999999999999987 999999999999999 7999999999987621
Q ss_pred ------------------------------EE-ecCccc--cccc-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 005798 533 ------------------------------GL-FGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 572 (676)
Q Consensus 533 ------------------------------~~-~g~~~~--~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deA 572 (676)
++ +|+... ..++ | | +++++++||+||||++|++|+|+|||
T Consensus 335 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 414 (494)
T PRK09847 335 LDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQA 414 (494)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHH
Confidence 11 233221 1233 4 2 36889999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 573 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 573 i~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
|+++|+++|||++||||+|.+++.++++++++|+|+||+.+......||||.+.||+| +++|.+|+++||+.|+|+
T Consensus 415 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v~ 490 (494)
T PRK09847 415 LQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNG----RDKSLHALEKFTELKTIW 490 (494)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccC----ccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999997766677899999999886 356999999999999997
Q ss_pred Ec
Q 005798 653 RG 654 (676)
Q Consensus 653 ~~ 654 (676)
+.
T Consensus 491 ~~ 492 (494)
T PRK09847 491 IS 492 (494)
T ss_pred Ee
Confidence 64
No 72
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=4.9e-71 Score=615.09 Aligned_cols=394 Identities=20% Similarity=0.219 Sum_probs=330.1
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 2 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 73 (452)
T cd07102 2 SPIDGSVIAERPLAS------LEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIA-- 73 (452)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH--
Confidence 356888889987777 789999999999999999999999999999999999999999999988776654321
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++. .|+...++.+++++...+. .+..... ...+...+.+++|+|||++|+|| +|. +.+++++|||
T Consensus 74 --~~~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~AL 141 (452)
T cd07102 74 --QAG--------GEIRGMLERARYMISIAEEALADIRVP--EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPAL 141 (452)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHH
Confidence 111 2344444444443322211 1111110 11244567889999999999998 586 5688999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 463 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-- 463 (676)
++||+||+|||+.+|+++..|.+++.+ + +|+|++|+|++..+.+..|..||+||+|+||||+++|+.|+++++
T Consensus 142 aaGN~VVlKps~~~~~~~~~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 217 (452)
T cd07102 142 LAGNAVILKHSPQTPLCGERFAAAFAE----AGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGR 217 (452)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence 999999999999999999999999986 7 999999999964467778888999999999999999999998763
Q ss_pred -CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---------
Q 005798 464 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 532 (676)
Q Consensus 464 -~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 532 (676)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 218 ~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~L~~~~~~l~vg~p~~~~~~ 296 (452)
T cd07102 218 FIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIY-DAFVEAFVAVVKGYKLGDPLDPSTT 296 (452)
T ss_pred CCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999876532
Q ss_pred -------------------------EE-ecCcc-----ccc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 005798 533 -------------------------GL-FGGPR-----ASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 533 -------------------------~~-~g~~~-----~~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi 573 (676)
++ +|+.+ ..+ ++ | | ++|++++||+||||++|++|+|+||||
T Consensus 297 ~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 376 (452)
T cd07102 297 LGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAI 376 (452)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHH
Confidence 12 24432 112 33 5 2 468899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|++|+++||+.|+++
T Consensus 377 ~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 377 ALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRG----VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999998766667899999999986 356999999999999985
No 73
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=5.1e-71 Score=616.44 Aligned_cols=403 Identities=20% Similarity=0.224 Sum_probs=334.5
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|++++.
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 72 (465)
T cd07098 2 DPATGQHLGSVPADT------PEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTM--- 72 (465)
T ss_pred CCCCCCeeEEeeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 356889999988887 88999999999999999999999999999999999999999999999887765432
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-c-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-I-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
.++.. .++...++.+++++...+. . ....+......+...+++++|+|||++|+|| +|. ..++++++|
T Consensus 73 -~~a~~-------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~A 144 (465)
T cd07098 73 -VDASL-------GEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAA 144 (465)
T ss_pred -HHHHH-------HHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHH
Confidence 22221 2344455555544432111 0 1111100000123456789999999999998 585 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.+|+|+..+++++.++|.++ +|+|++|+|+|..++++.|..||+|++|+||||+.+|+.|++.+
T Consensus 145 LaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~ 224 (465)
T cd07098 145 LFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE 224 (465)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999899 99999999996546788888999999999999999999999876
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC---------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 531 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~--------- 531 (676)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 225 ~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~G~p~~~~~ 303 (465)
T cd07098 225 SLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY-DKLLEILTDRVQALRQGPPLDGDV 303 (465)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 49999999999999999999999999999999999987 999999999999999 799999999887652
Q ss_pred -------------------------cEE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 532 -------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 532 -------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
+++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||
T Consensus 304 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 383 (465)
T cd07098 304 DVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEE 383 (465)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHH
Confidence 122 233221 12 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
||+++|+++|||++||||+|.+++.++++++++|.|+||+.... .+..||||.+.||+| +++|++|+++|++.|
T Consensus 384 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k 459 (465)
T cd07098 384 AVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFG----RFAGEEGLRGLCNPK 459 (465)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCC----ccChHHHHHHhheeE
Confidence 99999999999999999999999999999999999999986422 367899999999986 356999999999999
Q ss_pred EEEEc
Q 005798 650 WILRG 654 (676)
Q Consensus 650 ~v~~~ 654 (676)
++.++
T Consensus 460 ~~~~~ 464 (465)
T cd07098 460 SVTED 464 (465)
T ss_pred EEEEe
Confidence 99763
No 74
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=5.6e-71 Score=621.47 Aligned_cols=400 Identities=19% Similarity=0.203 Sum_probs=335.7
Q ss_pred HHHHHh-CCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 228 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 228 i~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
+.++.+ |+.++++...+ .+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|++++.
T Consensus 50 v~~P~t~g~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 123 (518)
T cd07125 50 VIDPADHERTIGEVSLAD------AEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTL 123 (518)
T ss_pred EECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 367788 88999988888 88999999999999999999999999999999999999999999999988765543
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-cccc-ccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQI-LKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 382 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 382 (676)
. ++. .|+..+++.++++++..+. .+.. .+. +.+...+.+++|+|||++|+|| ||. +.++++
T Consensus 124 ~----~a~--------~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i 188 (518)
T cd07125 124 A----DAD--------AEVREAIDFCRYYAAQARELFSDPELPG---PTGELNGLELHGRGVFVCISPWNFPLAIFTGQI 188 (518)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceeEEEEecccEEEEECCcchHHHHHHHHH
Confidence 2 221 2445555555555432221 1111 111 1234457889999999999999 585 568999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHH
Q 005798 383 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 460 (676)
Q Consensus 383 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 460 (676)
++||++||+||+|||+.||+++..+++++.+ + +|+|+||+|++ ++++++.|..||+||+|+||||+++|+.|++
T Consensus 189 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 264 (518)
T cd07125 189 AAALAAGNTVIAKPAEQTPLIAARAVELLHE----AGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINR 264 (518)
T ss_pred HHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH----cCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 4557888889999999999999999999988
Q ss_pred hc------CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCcE
Q 005798 461 ST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG 533 (676)
Q Consensus 461 ~a------~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~ 533 (676)
.+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++.
T Consensus 265 ~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g 343 (518)
T cd07125 265 ALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIA-ERFIEMLKGAMASLKVG 343 (518)
T ss_pred HhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhH-HHHHHHHHHHHhcCCcc
Confidence 65 37999999999999999999999999999999999987 999999999999999 79999999998876321
Q ss_pred ---------------------------------E-ecCccc--cc-cc-c-C---CCCCcccccccCceEEEEEeC--CH
Q 005798 534 ---------------------------------L-FGGPRA--SK-LL-Q-I---PETRLFHHEYNSMVCTVEIVD--DV 569 (676)
Q Consensus 534 ---------------------------------~-~g~~~~--~~-~~-p-v---~~~~~~~eE~FGPVl~i~~~~--~~ 569 (676)
+ .|+... .+ ++ | | .+|++++||+||||++|++|+ |+
T Consensus 344 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~~ 423 (518)
T cd07125 344 DPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIVGIFDLTTEVFGPILHVIRFKAEDL 423 (518)
T ss_pred CCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeecCChHhhCcccCCeEEEEEeCCCCH
Confidence 1 122221 12 23 5 2 268999999999999999999 99
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC--CCCcccCcccccccccccccccccchhccee
Q 005798 570 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLT 647 (676)
Q Consensus 570 deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~ 647 (676)
||||+++|+++|||++||||+|.+++.++++++++|.|+||+++... +..||||.+.||+|. +++|++|+++||+
T Consensus 424 deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~---~~gg~~~~~~ft~ 500 (518)
T cd07125 424 DEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP---KAGGPNYLLRFGN 500 (518)
T ss_pred HHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc---ccccHHHHHHhcc
Confidence 99999999999999999999999999999999999999999876532 468999999999862 2457999999999
Q ss_pred EEEEEEcCc
Q 005798 648 TRWILRGNG 656 (676)
Q Consensus 648 ~k~v~~~~~ 656 (676)
.|++++.+.
T Consensus 501 ~k~i~~~~~ 509 (518)
T cd07125 501 EKTVSLNTT 509 (518)
T ss_pred eEEEEEEcc
Confidence 999988543
No 75
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=8e-71 Score=619.66 Aligned_cols=398 Identities=18% Similarity=0.224 Sum_probs=334.5
Q ss_pred HHHHH-hCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 228 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 228 i~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
+.++. +|+.++++..++ .+++++++++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|.+++.
T Consensus 54 ~~~P~~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 127 (514)
T PRK03137 54 SINPANKSEVVGRVSKAT------KELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPW 127 (514)
T ss_pred eECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH
Confidence 35677 588899988888 88999999999999999999999999999999999999999999999887665432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc--cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI--GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 382 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 382 (676)
. ++ ..|+...++.++++++..+.. +..... ..+...+++++|+|||++|+|| ||. +.++++
T Consensus 128 ~----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i 192 (514)
T PRK03137 128 A----EA--------DADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMT 192 (514)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHHH
Confidence 1 22 125566666666655433211 111111 1234567889999999999999 585 568999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHH
Q 005798 383 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 460 (676)
Q Consensus 383 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 460 (676)
++||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++ +.++++.|..||+|++|+||||+.+|+.|++
T Consensus 193 ~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~ 268 (514)
T PRK03137 193 LAAIVAGNTVLLKPASDTPVIAAKFVEVLEE----AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYE 268 (514)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999995 5678888889999999999999999999998
Q ss_pred hcC---------CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhc
Q 005798 461 STK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE 530 (676)
Q Consensus 461 ~a~---------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~ 530 (676)
.++ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++
T Consensus 269 ~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~l 347 (514)
T PRK03137 269 RAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVY-DEVLEKVVELTKEL 347 (514)
T ss_pred HHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHH-HHHHHHHHHHHHhC
Confidence 763 6999999999999999999999999999999999987 999999999999999 79999999998865
Q ss_pred Cc--------------------------------E-EecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeC
Q 005798 531 GV--------------------------------G-LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD 567 (676)
Q Consensus 531 ~~--------------------------------~-~~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~ 567 (676)
.+ + ++|+... .+ ++ | | +++++++||+||||++|++|+
T Consensus 348 ~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 427 (514)
T PRK03137 348 TVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427 (514)
T ss_pred CCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecC
Confidence 32 1 1233221 12 33 5 2 468899999999999999999
Q ss_pred CHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcc
Q 005798 568 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGL 645 (676)
Q Consensus 568 ~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 645 (676)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||.|.||+|. +++|.+|+++|
T Consensus 428 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~~gg~~~l~~f 504 (514)
T PRK03137 428 DFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS---KAGGPDYLLLF 504 (514)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc---ccCCHHHHHHh
Confidence 999999999999999999999999999999999999999999986533 2457999999998862 24688999999
Q ss_pred eeEEEEEEc
Q 005798 646 LTTRWILRG 654 (676)
Q Consensus 646 t~~k~v~~~ 654 (676)
|+.|+|...
T Consensus 505 t~~k~v~~~ 513 (514)
T PRK03137 505 LQAKTVSEM 513 (514)
T ss_pred ceEEEEEEe
Confidence 999998653
No 76
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=5.6e-71 Score=618.16 Aligned_cols=399 Identities=18% Similarity=0.194 Sum_probs=333.0
Q ss_pred HHHHh-CCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.++.+ ++.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 19 ~~P~t~~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (478)
T cd07131 19 RNPADLEEVVGTFPLST------ASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLA 92 (478)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 34666 46778877777 789999999999999999999999999999999999999999999988766544321
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..++...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| +|. +.++++++
T Consensus 93 ----~~--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 158 (478)
T cd07131 93 ----EG--------RGDVQEAIDMAQYAAGEGRRLFGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFP 158 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHH
Confidence 11 1255556666665554322 122222111 1233567889999999999998 595 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|++ ++++++.|..||+||+|+||||+++|+.|++.+
T Consensus 159 ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 234 (478)
T cd07131 159 ALVCGNTVVFKPAEDTPACALKLVELFAE----AGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234 (478)
T ss_pred HHHcCCEEEEECCCcCcHHHHHHHHHHHh----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 555888888999999999999999999998876
Q ss_pred ---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 463 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 235 a~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 313 (478)
T cd07131 235 ARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVY-DEFLKRFVERAKRLRVGDGLDE 313 (478)
T ss_pred hhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred ----------------------------EE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCH
Q 005798 533 ----------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 569 (676)
Q Consensus 533 ----------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~ 569 (676)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 393 (478)
T cd07131 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSL 393 (478)
T ss_pred CCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCH
Confidence 12 233221 12 23 5 2 36789999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeE
Q 005798 570 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 648 (676)
Q Consensus 570 deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~ 648 (676)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+++.. .+.+||||.++||+|. +++|.+|+++||+.
T Consensus 394 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~---~~~g~~~~~~f~~~ 470 (478)
T cd07131 394 EEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH---REAGTTALDAFTEW 470 (478)
T ss_pred HHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC---cCCcHHHHHHhhhe
Confidence 9999999999999999999999999999999999999999987654 4678999999998862 24589999999999
Q ss_pred EEEEEcC
Q 005798 649 RWILRGN 655 (676)
Q Consensus 649 k~v~~~~ 655 (676)
|+|++++
T Consensus 471 k~i~~~~ 477 (478)
T cd07131 471 KAVYVDY 477 (478)
T ss_pred EEEEEeC
Confidence 9998753
No 77
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=4.6e-71 Score=617.63 Aligned_cols=395 Identities=18% Similarity=0.220 Sum_probs=334.3
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 18 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 90 (468)
T cd07088 18 LNPATGEVVATVPAAT------AEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLS- 90 (468)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4567788899888888 789999999999999999999999999999999999999999999988876544321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..++..+++.+++++.+... .+...+.. ..+...+.+++|+|||++|+|| +|. +.++++++|
T Consensus 91 ---~a--------~~ev~~~~~~l~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 91 ---LA--------RVEVEFTADYIDYMAEWARRIEGEIIPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhCCccccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 21 12455566666665543322 22222210 1134567889999999999999 586 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 462 (676)
|++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ ++++++.|..||++|+|+||||+++|+.|++.+
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 233 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDE----AGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA 233 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 455778888899999999999999999998876
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 234 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 312 (468)
T cd07088 234 ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIY-DEFMEKLVEKMKAVKVGDPFDAA 312 (468)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred ---------------------------EE-ecCccc---cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 005798 533 ---------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 533 ---------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi 573 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 392 (468)
T cd07088 313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAI 392 (468)
T ss_pred CccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHH
Confidence 12 233221 13 33 5 2 368999999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+++|+++|||++||||+|.++++++++++++|.|+||++.......||||.+.||+| +++|++|+++||+.|+|.
T Consensus 393 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G----~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 393 ELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLG----GADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999998766566799999999886 356999999999999985
No 78
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=3.4e-71 Score=610.00 Aligned_cols=379 Identities=20% Similarity=0.197 Sum_probs=313.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHH
Q 005798 256 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 335 (676)
Q Consensus 256 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (676)
+.+++|++||+.|+++|..+|.++|++++++|++|+++|+++++.|++++. .++.. .|+..+++.++++
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~ 70 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSE----FEAYM-------TEIGFVLSEINYA 70 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHH-------HHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999887765542 12221 2444455555554
Q ss_pred hccccc-ccc-cccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005798 336 ADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 411 (676)
Q Consensus 336 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~ 411 (676)
++..+. .+. ..+......+...++.++|+|||++|+|| ||. +.+++++|||++||+||+|||+.||.++..+++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~ 150 (449)
T cd07136 71 IKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150 (449)
T ss_pred HHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHH
Confidence 432211 111 11100001233567889999999999998 585 56899999999999999999999999999999999
Q ss_pred HHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCCCCHHHHH
Q 005798 412 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAK 488 (676)
Q Consensus 412 ~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~A~ 488 (676)
.+ ++|+|++|+|+|+.+.+..|.+|+ ||+|+||||+++|+.|++.++ +|+++|||||||+||++|||+|.|+
T Consensus 151 ~~----alP~gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa 225 (449)
T cd07136 151 EE----TFDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAA 225 (449)
T ss_pred HH----hCCCCEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHH
Confidence 86 499999999996444566666665 999999999999999998773 8999999999999999999999999
Q ss_pred HHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----------------------------E-EecCc
Q 005798 489 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGP 538 (676)
Q Consensus 489 ~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----------------------------~-~~g~~ 538 (676)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.. + ++|+.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~ 304 (449)
T cd07136 226 KRIVWGKFLNAGQTCVAPDYVLVHESVK-EKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGN 304 (449)
T ss_pred HHHHHHHHcccCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCC
Confidence 999999999987 999999999999999 7999999999987621 0 12432
Q ss_pred cc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEE
Q 005798 539 RA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 609 (676)
Q Consensus 539 ~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~i 609 (676)
.. .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|..++.++++++++|+|+|
T Consensus 305 ~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~v 384 (449)
T cd07136 305 TDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCI 384 (449)
T ss_pred cCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 21 13 33 5 2 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC--CCCCcccCcccccccccccccccccchhcceeEEEEEEcC
Q 005798 610 NASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 610 N~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 655 (676)
|+.... .+..||||.+.||+|. ++|.+|+++||+.|+|+++.
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v~~~~ 428 (449)
T cd07136 385 NDTIMHLANPYLPFGGVGNSGMGS----YHGKYSFDTFSHKKSILKKS 428 (449)
T ss_pred CCccccccCCCCCccCcCcccCCc----ccCHHHHHHhccceEEEEcC
Confidence 987543 3678999999999863 56999999999999998864
No 79
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=5.7e-71 Score=621.73 Aligned_cols=396 Identities=17% Similarity=0.178 Sum_probs=330.1
Q ss_pred HHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhch
Q 005798 231 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 310 (676)
Q Consensus 231 ~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~ 310 (676)
|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++..
T Consensus 39 P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~--- 109 (524)
T PRK09407 39 PFTGEPLATVPVST------AADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARR--- 109 (524)
T ss_pred CCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH---
Confidence 56788899988888 889999999999999999999999999999999999999999999999887765432
Q ss_pred hHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHH
Q 005798 311 AKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 387 (676)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 387 (676)
++. .|+...+..+++++...+. .+..............+..++|+|||++|+|| +|. +.+++++|||+
T Consensus 110 -~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALa 180 (524)
T PRK09407 110 -HAF--------EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALL 180 (524)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHH
Confidence 221 2444444444544432211 11110000001123567889999999999998 584 67899999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 005798 388 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 463 (676)
Q Consensus 388 aGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-- 463 (676)
+||+||+|||+.+|.++..+++++.+ + +|+|+||+|++ +.++++.|..| +|+|+||||+++|+.|++.++
T Consensus 181 aGN~VIlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~ 254 (524)
T PRK09407 181 AGNAVVLKPDSQTPLTALAAVELLYE----AGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR 254 (524)
T ss_pred cCCEEEEECCCCCHHHHHHHHHHHHH----cCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999986 7 99999999996 55677777765 899999999999999998874
Q ss_pred -CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---------
Q 005798 464 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 532 (676)
Q Consensus 464 -~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 532 (676)
+|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 255 ~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~~~~~~ 333 (524)
T PRK09407 255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIY-DEFVRAFVAAVRAMRLGAGYDYSAD 333 (524)
T ss_pred CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCcCCc
Confidence 8999999999999999999999999999999999977 999999999999999 7999999999887631
Q ss_pred -------------------------EE-ecCccc---cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 533 -------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 533 -------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||++
T Consensus 334 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~ 413 (524)
T PRK09407 334 MGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVER 413 (524)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHH
Confidence 22 244321 12 33 5 2 36899999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCC---CCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~---~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+|+++|||++||||+|.+++.++++++++|+|+||++.. ..+..||||.+.||+| +++|++|+++||+.|+|.
T Consensus 414 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v~ 489 (524)
T PRK09407 414 ANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG----RRHGAEGLLKYTESQTIA 489 (524)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC----ccchHHHHHHhCCeEEEE
Confidence 999999999999999999999999999999999998654 2345799999999886 356999999999999998
Q ss_pred EcC
Q 005798 653 RGN 655 (676)
Q Consensus 653 ~~~ 655 (676)
+..
T Consensus 490 ~~~ 492 (524)
T PRK09407 490 TQR 492 (524)
T ss_pred Ecc
Confidence 764
No 80
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=5e-71 Score=617.52 Aligned_cols=394 Identities=20% Similarity=0.190 Sum_probs=332.9
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
.+|.+|+.++.+...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|+++|++++..|++++.
T Consensus 19 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (471)
T cd07139 19 VSPATEEVVGRVPEAT------PADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPI 92 (471)
T ss_pred ECCCCCCEeEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567888889987777 78999999999999985 999999999999999999999999999998876654432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-cc-ccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 382 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 382 (676)
. ++. ..++..+++.+++++...+. .+ ...+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 93 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i 158 (471)
T cd07139 93 S----WSR-------RAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKI 158 (471)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHH
Confidence 1 111 12566666677776654321 11 11111 1234567889999999999999 585 568999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 383 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 383 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
++||++||+||+|||+.+|+++..+.+++.+ + +|+|++|+|+++.+.+..|..||++++|+||||+.+|+.|++.
T Consensus 159 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~ 234 (471)
T cd07139 159 APALAAGCTVVLKPSPETPLDAYLLAEAAEE----AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234 (471)
T ss_pred HHHHhcCCEEEEECCCcCCHHHHHHHHHHHH----cCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999886 7 9999999999755678888889999999999999999999887
Q ss_pred cC---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-----
Q 005798 462 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 532 (676)
Q Consensus 462 a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 532 (676)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 235 ~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 313 (471)
T cd07139 235 CGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRY-DEVVEALAAAVAALKVGDPLD 313 (471)
T ss_pred HHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhCCcCCCCC
Confidence 73 8999999999999999999999999999999999977 999999999999999 7999999999876531
Q ss_pred -----------------------------EE-ecCccc----ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 005798 533 -----------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 533 -----------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
++ +|+... .++ + | | +++++++||+||||++|++|+|+|
T Consensus 314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 393 (471)
T cd07139 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDED 393 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHH
Confidence 22 243321 122 3 5 2 468999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++. ..+.+||||.+.||+| +++|++|+++||+.|+
T Consensus 394 eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~ft~~k~ 468 (471)
T cd07139 394 DAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIG----REGGPEGLDAYLETKS 468 (471)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCC----ccchHHHHHHHhceeE
Confidence 9999999999999999999999999999999999999999876 5567899999999886 3569999999999999
Q ss_pred EE
Q 005798 651 IL 652 (676)
Q Consensus 651 v~ 652 (676)
++
T Consensus 469 i~ 470 (471)
T cd07139 469 IY 470 (471)
T ss_pred Ee
Confidence 85
No 81
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=1.4e-70 Score=614.42 Aligned_cols=396 Identities=16% Similarity=0.106 Sum_probs=328.8
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 18 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 90 (484)
T TIGR03240 18 TNPATQEVLWQGAAAS------AAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW- 90 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4577889999988878 889999999999999999999999999999999999999999999998776654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..|+..+++.+++++.... ..+..... ..+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 91 ---~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 91 ---ET--------RTEVASMIGKVAISIKAYHERTGESENP---MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 11 1355556666555433221 12322111 1123457889999999999999 585 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.||+++..+++++++ + +|+|+||+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~ 232 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEK----AGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAG 232 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHH----hCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999986 7 99999999997656788888999999999999999999999875
Q ss_pred --CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCcc-CChhHHHHHHHHHHhcCc------
Q 005798 463 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL-ACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 463 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i-~d~~f~~~l~~~~~~~~~------ 532 (676)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++ | |+|+++|+++++++.+
T Consensus 233 ~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~-d~f~~~l~~~~~~~~~g~~~~~ 311 (484)
T TIGR03240 233 RPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQG-DAFLARLVEVAERLTVGAWDAE 311 (484)
T ss_pred cCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccH-HHHHHHHHHHHHhcccCCCCcC
Confidence 26799999999999999999999999999999999987 99999999999998 6 5999999998876521
Q ss_pred -----------------------------EE-ecCcc--cc-ccc-c-C----CCCCcccccccCceEEEEEeCCHHHHH
Q 005798 533 -----------------------------GL-FGGPR--AS-KLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 533 -----------------------------~~-~g~~~--~~-~~~-p-v----~~~~~~~eE~FGPVl~i~~~~~~deAi 573 (676)
++ +|+.. .. .++ | | +++++++||+||||++|++|+|+||||
T Consensus 312 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 391 (484)
T TIGR03240 312 PQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAI 391 (484)
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHH
Confidence 11 12211 11 233 5 2 358899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+|+ +.|.++++ |++.|+++
T Consensus 392 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~----~~g~~~~~-~~~~~~~~ 466 (484)
T TIGR03240 392 AIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHR----PSAYYAAD-YCAYPVAS 466 (484)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCC----CCchHHHh-heeeeEEE
Confidence 999999999999999999999999999999999999987543 3568999999999863 45655544 99999999
Q ss_pred EcC
Q 005798 653 RGN 655 (676)
Q Consensus 653 ~~~ 655 (676)
+..
T Consensus 467 ~~~ 469 (484)
T TIGR03240 467 LEA 469 (484)
T ss_pred Eec
Confidence 875
No 82
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=1.1e-70 Score=612.35 Aligned_cols=395 Identities=18% Similarity=0.159 Sum_probs=330.1
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 2 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 73 (453)
T cd07099 2 NPATGEVLGEVPVTD------PAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRA-- 73 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 356888899888877 889999999999999999999999999999999999999999999998877655432
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccc-cccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..++..+++.++++++.... .+. ..+......+...+++++|+|||++|+|| +|. +.+++++||
T Consensus 74 --~~--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~A 143 (453)
T cd07099 74 --DA--------GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPA 143 (453)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 11 12455555555555433211 111 11110001234567889999999999998 486 568899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.+|.++..+++++.+ + +|+|+||+|+|..++++.|.+| .||+|+||||+++|+.|++.+
T Consensus 144 LaaGN~vilKps~~~p~~~~~l~~~l~~----ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~ 218 (453)
T cd07099 144 LAAGNAVVLKPSEVTPLVGELLAEAWAA----AGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE 218 (453)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHH----cCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 9999999999644667777776 599999999999999999877
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~~~~~~~ 297 (453)
T cd07099 219 RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVY-DEFVARLVAKARALRPGADDIGDA 297 (453)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887521
Q ss_pred --------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 533 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 533 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
++ +|+.+. .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07099 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIAL 377 (453)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHH
Confidence 22 244332 22 33 5 2 46789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+|+++|||++||||+|.++++++++++++|.|+||+.... .+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 378 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g----~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 378 ANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG----RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC----ccChHHHHHHhcceEEEe
Confidence 9999999999999999999999999999999999987543 467899999999875 367999999999999975
No 83
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=1.3e-70 Score=611.34 Aligned_cols=395 Identities=17% Similarity=0.197 Sum_probs=335.1
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~-- 74 (450)
T cd07092 3 DPATGEEIATVPDAS------AADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH-- 74 (450)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 467889999987777 789999999999999999999999999999999999999999999998876544321
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++. ..|+..+++.+++++...+.. +..... . ..+...+.+++|+|||++|+|| +|. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL 143 (450)
T cd07092 75 --LVR-------DDELPGAVDNFRFFAGAARTLEGPAAGE-Y-LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPAL 143 (450)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCc-c-CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHH
Confidence 111 135667777777766543322 111111 1 1233457889999999999998 596 5689999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 463 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-- 463 (676)
++||+||+|||+.+|.++..+.+++.+ .+|+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++.+.
T Consensus 144 ~aGN~VIlKps~~~~~~~~~l~~~~~~----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 219 (450)
T cd07092 144 AAGNTVVLKPSETTPLTTLLLAELAAE----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADT 219 (450)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHh----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 999999999999999999999999975 499999999995 4557788888999999999999999999998873
Q ss_pred -CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---------
Q 005798 464 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 532 (676)
Q Consensus 464 -~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 532 (676)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 220 ~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~ 298 (450)
T cd07092 220 LKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVY-DEFVAALVEAVSAIRVGDPDDEDTE 298 (450)
T ss_pred CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHH-HHHHHHHHHHHhhCCcCCCCCCCCc
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred ------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHH
Q 005798 533 ------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 577 (676)
Q Consensus 533 ------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN 577 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 299 ~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n 378 (450)
T cd07092 299 MGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELAN 378 (450)
T ss_pred cCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHh
Confidence 11 133221 12 33 5 2 3689999999999999999999999999999
Q ss_pred ccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 578 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 578 ~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|++.
T Consensus 379 ~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 379 DVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYG----KDLSIYALEDYTRIKHVM 449 (450)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----CCChHHHHHHHheeeEEe
Confidence 99999999999999999999999999999999988777778999999999886 356999999999999985
No 84
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=9.1e-71 Score=612.87 Aligned_cols=395 Identities=18% Similarity=0.199 Sum_probs=334.4
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
++.+++.++++...+ .+++++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 8 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 8 NPATGRVLAEVAACD------AADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 467888899988777 8899999999999998 49999999999999999999999999999998877654421
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++. ..|+..+++.+++++...+. .+...+. ..+...++.|+|+|||++|+|| ||. +.+++++|
T Consensus 82 ----~a~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ 147 (462)
T cd07112 82 ----DAL-------AVDVPSAANTFRWYAEAIDKVYGEVAPT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAP 147 (462)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHH
Confidence 211 12455556666655543221 2222111 1234567789999999999999 585 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ ++++++.|..|+++|+|+||||+++|+.|++.+
T Consensus 148 ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a 223 (462)
T cd07112 148 ALAAGNSVVLKPAEQSPLTALRLAELALE----AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYS 223 (462)
T ss_pred HHHcCCeeeeeCCCCCCHHHHHHHHHHHh----cCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999995 667888899999999999999999999998865
Q ss_pred ----CCCEEeecCCcceEEEcCCC-CHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----
Q 005798 463 ----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 532 (676)
Q Consensus 463 ----~~~~~lElGGk~p~iV~~dA-Dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 532 (676)
.||+++|||||||+||++|| |+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 224 a~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~ 302 (462)
T cd07112 224 GQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIK-DEFLEKVVAAAREWKPGDPL 302 (462)
T ss_pred HHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCC
Confidence 38999999999999999999 999999999999999987 999999999999999 7999999999876522
Q ss_pred ------------------------------EE-ecCccc----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCH
Q 005798 533 ------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 569 (676)
Q Consensus 533 ------------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~ 569 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 303 ~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 382 (462)
T cd07112 303 DPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSE 382 (462)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCH
Confidence 22 244321 12 33 5 2 46899999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEE
Q 005798 570 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 570 deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++|++.|
T Consensus 383 ~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~k 458 (462)
T cd07112 383 EEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNG----RDKSLHALDKYTELK 458 (462)
T ss_pred HHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhcee
Confidence 9999999999999999999999999999999999999999997766677899999999986 356999999999999
Q ss_pred EEEE
Q 005798 650 WILR 653 (676)
Q Consensus 650 ~v~~ 653 (676)
++++
T Consensus 459 ~i~~ 462 (462)
T cd07112 459 TTWI 462 (462)
T ss_pred EEEC
Confidence 9853
No 85
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=7e-71 Score=604.81 Aligned_cols=372 Identities=17% Similarity=0.206 Sum_probs=301.2
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
-+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++. .++. +.
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~~~~--------------~~ 64 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGR----VEDK--------------IA 64 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----HHHH--------------HH
Confidence 35899999999999999999999999999999999999999999999876654432 1111 11
Q ss_pred HHHHHhccccccccc-c-cccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHH
Q 005798 331 SIRILADMEEPIGQI-L-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAI 406 (676)
Q Consensus 331 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~ 406 (676)
.++++++.. .+.. . +......+...+++|+|+|||++|+|| ||. +.++++++||++||+||+||||.||+|+.+
T Consensus 65 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~ 142 (429)
T cd07121 65 KNHLAAEKT--PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAY 142 (429)
T ss_pred HHHHHHHhc--CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHH
Confidence 222222110 0100 0 000001122356788999999999999 595 678999999999999999999999999999
Q ss_pred HHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCH
Q 005798 407 LHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANL 484 (676)
Q Consensus 407 l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl 484 (676)
+++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++. .+|+++|||||||+||++||||
T Consensus 143 l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-~k~~~lelGGk~p~iV~~dADl 221 (429)
T cd07121 143 AVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-GKKAIGAGAGNPPVVVDETADI 221 (429)
T ss_pred HHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-CCceEeecCCCceEEEecCCCH
Confidence 999999888889 99999999996 55677888889999999999999999999876 5999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhc----------------------CcEE-ecCcc-
Q 005798 485 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE----------------------GVGL-FGGPR- 539 (676)
Q Consensus 485 ~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~----------------------~~~~-~g~~~- 539 (676)
|+|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ ..+ |.++ .|+..
T Consensus 222 d~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~-~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~ 299 (429)
T cd07121 222 EKAARDIVQGASFDNNLPCIAEKEVIAVDSVA-DYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDAS 299 (429)
T ss_pred HHHHHHHHhcccccCCCCCCccceEEEeHHHH-HHHHHHHHHC-CCEEcCHHHHHHHHHhhcccCCCccccccccCcCHH
Confidence 9999999999999987 999999999999999 7999999875 111 1111 12221
Q ss_pred -c---cccc-----c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCc--eeEEEecCHHHHHHHHhcc
Q 005798 540 -A---SKLL-----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQV 602 (676)
Q Consensus 540 -~---~~~~-----p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL--~a~vft~d~~~a~~~~~~l 602 (676)
. .+++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++
T Consensus 300 ~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l 379 (429)
T cd07121 300 KILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAM 379 (429)
T ss_pred HHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhC
Confidence 0 1222 2 2 3689999999999999999999999999999999999 9999999999999999999
Q ss_pred CeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 603 DSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 603 ~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
++|+||||+++. .++||||.+.|+++- .|+.| +..+..|+++.
T Consensus 380 ~aG~v~iN~~~~--~~~p~gG~k~s~~~~-----~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 380 QTTIFVKNGPSY--AGLGVGGEGYTTFTI-----AGPTG-EGLTSARTFTR 422 (429)
T ss_pred CceEEEEcCCCc--CccccCCCccceEEe-----cCCcC-cCccChhhhhe
Confidence 999999998754 568999988887632 24555 55566666543
No 86
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=2.1e-70 Score=612.29 Aligned_cols=398 Identities=15% Similarity=0.132 Sum_probs=334.6
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|.+++.
T Consensus 21 ~~P~t~~~i~~~~~~~------~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-- 92 (477)
T TIGR01722 21 TNPATNEVTTKVAFAS------VDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTH-- 92 (477)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH--
Confidence 4577899999988888 88999999999999999999999999999999999999999999998876654432
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
.++ ..|+...++.+++++...+. .+...+. ...+...+.+++|+|||++|+|| ||. +.++++++|
T Consensus 93 --~~a--------~~ev~~~i~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 160 (477)
T TIGR01722 93 --SDA--------LGDVARGLEVVEHACGVNSLLKGETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIA 160 (477)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHH
Confidence 122 23666777777766543322 2222211 11234457789999999999998 596 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
|++||+||+|||+.+|+++..+++++.+ + +|+|++|+|+|..+.++.|..||+|++|+||||+++|+.|++.+
T Consensus 161 LaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~ 236 (477)
T TIGR01722 161 IACGNTFVLKPSEKVPSAAVKLAELFSE----AGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA 236 (477)
T ss_pred HhcCCEEEeeCcccChHHHHHHHHHHHH----hCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996545667778899999999999999999998876
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC---------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 531 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~--------- 531 (676)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++ | +|+++|+++++++.
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~-~f~~~l~~~~~~~~~G~~~~~~~ 314 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-D-EWVPEIRERAEKIRIGPGDDPGA 314 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-H-HHHHHHHHHHhcCCCCCCCCCCC
Confidence 38999999999999999999999999999999999977 99999999999998 5 99999999987652
Q ss_pred -------------------------cEEe-cCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 532 -------------------------VGLF-GGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 532 -------------------------~~~~-g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++++ |+... .+ ++ | | +++.+++||+||||++|++|+|+||
T Consensus 315 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~e 394 (477)
T TIGR01722 315 EMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEE 394 (477)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHH
Confidence 2232 33321 12 23 5 2 3688999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
||+++|+++|||++||||+|.++++++++++++|.|+||++.... +.+||||.+.||+| +.+++|++|+++||+.|+
T Consensus 395 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G--~~~~~g~~~l~~~~~~k~ 472 (477)
T TIGR01722 395 AIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFG--DHHIYGKQGTHFYTRGKT 472 (477)
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCC--CCccChHHHHHHhcCeeE
Confidence 999999999999999999999999999999999999999865443 56899999999886 323568999999999999
Q ss_pred EEEc
Q 005798 651 ILRG 654 (676)
Q Consensus 651 v~~~ 654 (676)
++++
T Consensus 473 i~~~ 476 (477)
T TIGR01722 473 VTTR 476 (477)
T ss_pred EEEe
Confidence 9875
No 87
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=1.5e-70 Score=604.41 Aligned_cols=375 Identities=21% Similarity=0.243 Sum_probs=310.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHH
Q 005798 256 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 335 (676)
Q Consensus 256 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (676)
+++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|++++. .++... |+..+++.++++
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~-------ev~~~~~~~~~~ 71 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPS----AESFRD-------EVSVLVSSCKLA 71 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH----HHHHHH-------HHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999988876543 122222 444455555544
Q ss_pred hccccc-ccc---cccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005798 336 ADMEEP-IGQ---ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 409 (676)
Q Consensus 336 ~~~~~~-~~~---~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 409 (676)
+..... .+. ..+.. ......+++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+..+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~ 149 (432)
T cd07137 72 IKELKKWMAPEKVKTPLT--TFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAK 149 (432)
T ss_pred HHHHHHHhCCcccCCCcc--cCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHH
Confidence 432111 111 01100 1122456789999999999998 585 568999999999999999999999999999999
Q ss_pred HHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcCCCCHHH
Q 005798 410 VITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDV 486 (676)
Q Consensus 410 l~~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~ 486 (676)
++.+ ++|+|++|+|+|+.+.++.|..| ++|+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.
T Consensus 150 ~~~~----~~P~gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~ 224 (432)
T cd07137 150 LIPE----YLDTKAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKV 224 (432)
T ss_pred HHHH----hCCcCeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHH
Confidence 9986 49999999999754566666666 599999999999999998887 399999999999999999999999
Q ss_pred HHHHHHHhcC-CCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------------------------------
Q 005798 487 AKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 532 (676)
Q Consensus 487 A~~~iv~~~~-~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------------------------------- 532 (676)
|++.+++|+| .|+| .|+|++|+|||+++| |+|+++|+++++++..
T Consensus 225 aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga 303 (432)
T cd07137 225 AVRRIAGGKWGCNNGQACIAPDYVLVEESFA-PTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVAD 303 (432)
T ss_pred HHHHHHHHhhhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCC
Confidence 9999999999 4776 999999999999999 7999999998876521
Q ss_pred EE-ecCccc-ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhcc
Q 005798 533 GL-FGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 602 (676)
Q Consensus 533 ~~-~g~~~~-~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l 602 (676)
++ +|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 304 ~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 383 (432)
T cd07137 304 KIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAET 383 (432)
T ss_pred eEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC
Confidence 12 244322 233 3 5 2 36899999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 603 DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 603 ~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
++|.|+||++... .+.+||||.+.||+| +++|.+++++|++.|+|++
T Consensus 384 ~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 384 SSGGVTFNDTVVQYAIDTLPFGGVGESGFG----AYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred CcCcEEECCccccccCCCCCCCCcCcCcCC----ccccHHHHHHhccCceeeC
Confidence 9999999987643 367899999999986 3569999999999999864
No 88
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=9e-71 Score=613.27 Aligned_cols=384 Identities=19% Similarity=0.226 Sum_probs=327.5
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.++.+++.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++..
T Consensus 42 ~nP~t~~~i~~~~~a~------~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 114 (480)
T cd07111 42 INPATGEVLASVLQAE------EEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIR- 114 (480)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4567888899887777 889999999999999999999999999999999999999999999988776654321
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++. ..++...++.+++++...+... + .+..++|+|||++|+|| ||. +.++++++||
T Consensus 115 ---~a~-------~~ev~~~~~~~~~~~~~~~~~~----------~--~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~AL 172 (480)
T cd07111 115 ---ESR-------DCDIPLVARHFYHHAGWAQLLD----------T--ELAGWKPVGVVGQIVPWNFPLLMLAWKICPAL 172 (480)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhc----------C--CcccceecceEEEECCCccHHHHHHHHHHHHH
Confidence 221 1245556666665544322110 1 12457999999999999 585 5689999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 462 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a--- 462 (676)
++||+||+|||+.+|.++..+++++.+ + ||+|+||+|++..+++..|..||+||+|+||||+.+|+.|++.+
T Consensus 173 aaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~ 248 (480)
T cd07111 173 AMGNTVVLKPAEYTPLTALLFAEICAE----AGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGT 248 (480)
T ss_pred HcCCEEEEECCCCChHHHHHHHHHHHh----cCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcc
Confidence 999999999999999999999999886 7 99999999996546788888999999999999999999999877
Q ss_pred CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---------
Q 005798 463 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 532 (676)
Q Consensus 463 ~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 532 (676)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 249 ~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~~~vg~p~~~~~~ 327 (480)
T cd07111 249 GKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVA-EELIRKLKERMSHLRVGDPLDKAID 327 (480)
T ss_pred CCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 38999999999999999999999999999999999977 999999999999999 7999999999887532
Q ss_pred -------------------------EEe-cCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHH
Q 005798 533 -------------------------GLF-GGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 576 (676)
Q Consensus 533 -------------------------~~~-g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~a 576 (676)
+++ |+... .+ ++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 328 ~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~ 407 (480)
T cd07111 328 MGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALA 407 (480)
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHH
Confidence 111 22211 12 23 5 2 468899999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 577 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 577 N~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|.+|+++||+.|+
T Consensus 408 n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 408 NNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFG----REGGKEGLYEYLRPSW 477 (480)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCC----ccchHHHHHHHhhccC
Confidence 999999999999999999999999999999999998776677899999999986 3569999999999985
No 89
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=2.3e-70 Score=605.31 Aligned_cols=378 Identities=21% Similarity=0.253 Sum_probs=320.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHH
Q 005798 253 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 332 (676)
Q Consensus 253 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (676)
|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++++|++++.. ++ ..++..+++.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAA----WA--------GFNVDLAAGML 68 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999998877655421 11 23566777777
Q ss_pred HHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005798 333 RILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 409 (676)
Q Consensus 333 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 409 (676)
+++++..+.. +...+.. ..+...+.+++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|+|+..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 146 (432)
T cd07105 69 REAASLITQIIGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146 (432)
T ss_pred HHHHHHHHHhcCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHH
Confidence 7776543321 2222211 1234567889999999999999 585 578999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCC----ChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCC
Q 005798 410 VITSAIPDT-VGEKLIGLVTSR----EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKS 481 (676)
Q Consensus 410 l~~~al~~a-lP~gv~~~v~~~----~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~d 481 (676)
++.+ + +|+|+||+|++. .++++.|..||+||+|+||||+++|+.|++++. +|+++|||||||+||++|
T Consensus 147 ~~~~----aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~d 222 (432)
T cd07105 147 VFHE----AGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222 (432)
T ss_pred HHHH----cCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCC
Confidence 9986 7 999999999852 246788888999999999999999999998773 899999999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC-----------------------------
Q 005798 482 ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----------------------------- 531 (676)
Q Consensus 482 ADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~----------------------------- 531 (676)
||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 223 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~g 301 (432)
T cd07105 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIA-DEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKG 301 (432)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHH-HHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999987 999999999999999 799999999887542
Q ss_pred cEE-ecCccc---cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHH
Q 005798 532 VGL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 599 (676)
Q Consensus 532 ~~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~ 599 (676)
.++ .|+... .+ ++ | | +++.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+++++++
T Consensus 302 a~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~ 381 (432)
T cd07105 302 AKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA 381 (432)
T ss_pred CEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 233 344332 22 33 5 2 36889999999999999999999999999999999999999999999999999
Q ss_pred hccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 600 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 600 ~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+++++|.|+||+++.. .+..||||.+.||+| +++|++|+++|++.|+|++
T Consensus 382 ~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 382 KRIESGAVHINGMTVHDEPTLPHGGVKSSGYG----RFNGKWGIDEFTETKWITI 432 (432)
T ss_pred HhCCcCeEEECCCCCCCCCCCCCCCccccccc----ccChHHHHHHhhceEEEeC
Confidence 9999999999997654 467899999999886 3569999999999999863
No 90
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=3.1e-70 Score=604.14 Aligned_cols=381 Identities=20% Similarity=0.214 Sum_probs=317.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHH
Q 005798 256 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 335 (676)
Q Consensus 256 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (676)
+++++|++||+.|+.+|..+|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++.++++
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~~ev~~~~~~~~~~~~~~~~~ 77 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKF----EAVLSEILLVKNEIKYAISNLPEW 77 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999988876532 232234444556677777777766
Q ss_pred hcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005798 336 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 413 (676)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 413 (676)
..... ...... ..+...++.++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.|+..+++++.+
T Consensus 78 ~~~~~-~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 152 (443)
T cd07132 78 MKPEP-VKKNLA----TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK 152 (443)
T ss_pred hCCcc-CCCccc----cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 53211 111000 1122357889999999999998 595 6789999999999999999999999999999999985
Q ss_pred hcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcCCCCHHHHHH
Q 005798 414 AIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 489 (676)
Q Consensus 414 al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~~ 489 (676)
++|+|++|++++ ++....++ + ++||+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.|++
T Consensus 153 ----~lp~gv~~vv~g~~~~~~~l~-~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~ 226 (443)
T cd07132 153 ----YLDKECYPVVLGGVEETTELL-K-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAAR 226 (443)
T ss_pred ----hCCcCeEEEEeCCHHHHHHHH-h-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHH
Confidence 499999999996 44444544 4 4899999999999999998876 399999999999999999999999999
Q ss_pred HHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----------------------------E-EecCcc
Q 005798 490 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGPR 539 (676)
Q Consensus 490 ~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----------------------------~-~~g~~~ 539 (676)
.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.. + ++|+..
T Consensus 227 ~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~ 305 (443)
T cd07132 227 RIAWGKFINAGQTCIAPDYVLCTPEVQ-EKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQT 305 (443)
T ss_pred HHHHHHHhcCCCceeCCcEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCcc
Confidence 99999999987 999999999999999 7999999998876521 1 123322
Q ss_pred c-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEc
Q 005798 540 A-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHN 610 (676)
Q Consensus 540 ~-~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN 610 (676)
. .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 1 12 33 5 2 3688999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCcccCcccccccccccccccccchhcceeEEEEEEcCc
Q 005798 611 ASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 656 (676)
Q Consensus 611 ~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~ 656 (676)
+.... .+..||||.+.||+| +++|.+|+++|++.|++++++.
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMG----AYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred CcccccCCCCCCCCCCCcccCC----CcccHHHHHHhccccEEEEccc
Confidence 87643 356899999999886 3569999999999999987753
No 91
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=2.6e-70 Score=603.08 Aligned_cols=383 Identities=21% Similarity=0.205 Sum_probs=314.4
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
.+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|++++.. ++...++..+...+++++.
T Consensus 4 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 4 LDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPF----ETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHhHHHHHHHHHHHHHHHH
Confidence 668999999999999999999999999999999999999999999999988766532 2221222222333444444
Q ss_pred HHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005798 331 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 408 (676)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 408 (676)
.++.+........... ...+...+++++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.++..++
T Consensus 80 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~ 155 (436)
T cd07135 80 NLKKWAKDEKVKDGPL----AFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLA 155 (436)
T ss_pred HHHHhhCCcccCCccc----ccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHH
Confidence 3333321111100000 00123457789999999999998 585 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcCCCCH
Q 005798 409 KVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANL 484 (676)
Q Consensus 409 ~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl 484 (676)
+++++ .||+|++|+|++ +++++. |..|| +|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+
T Consensus 156 ~l~~~----~lP~g~v~vv~g~~~~~~~-l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl 229 (436)
T cd07135 156 ELVPK----YLDPDAFQVVQGGVPETTA-LLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADL 229 (436)
T ss_pred HHHHH----hCCcCEEEEEcCCchhHHH-HHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCH
Confidence 99986 499999999995 556666 55678 99999999999999998876 3999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------------------------------E
Q 005798 485 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G 533 (676)
Q Consensus 485 ~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------~ 533 (676)
|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+ +
T Consensus 230 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~ 308 (436)
T cd07135 230 ELAAKRILWGKFGNAGQICVAPDYVLVDPSVY-DEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK 308 (436)
T ss_pred HHHHHHHHHHHhccCCceecCCCEEeccHHHH-HHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCe
Confidence 9999999999999987 999999999999999 7999999998876521 1
Q ss_pred E-ecCccc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccC
Q 005798 534 L-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 603 (676)
Q Consensus 534 ~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~ 603 (676)
+ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++
T Consensus 309 v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~ 388 (436)
T cd07135 309 VVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTR 388 (436)
T ss_pred EEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCC
Confidence 1 233221 12 33 5 2 368899999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 604 SAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 604 ~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+|.|+||+++.. .+..||||.+.||+| +++|++|+++||+.|+|.
T Consensus 389 ~g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 389 SGGVVINDTLIHVGVDNAPFGGVGDSGYG----AYHGKYGFDTFTHERTVV 435 (436)
T ss_pred cCeEEECCccccccCCCCCcCCcCcccCC----ccccHhHHHHhccccccc
Confidence 999999987543 367899999999886 356999999999999874
No 92
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=6.3e-71 Score=615.23 Aligned_cols=393 Identities=22% Similarity=0.289 Sum_probs=334.3
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
.+|.+++.++++...+ .+++++++++|++||+.|+.++..+|.++|++++++|+++.++|++++..|++++..
T Consensus 12 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~- 84 (462)
T PF00171_consen 12 INPATGEVIGEVPSAT------AEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIA- 84 (462)
T ss_dssp EETTTECEEEEEEEBS------HHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHH-
T ss_pred CCCCCcCEEEEEcCCC------HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccc-
Confidence 3467899999998888 889999999999999999999999999999999999999999999998877654421
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
++ ..++..+++.++++++..+. .++..+. ..+...++.++|+|||++|+|| +|. +.++++++|
T Consensus 85 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 150 (462)
T PF00171_consen 85 ---EA--------RGEVDRAIDFLRYYADAARKLAGEVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPA 150 (462)
T ss_dssp ---HH--------HHHHHHHHHHHHHHHHHHHHHTEEEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHH
T ss_pred ---cc--------cchhhhhhhhhhhhhhcccceehhhccc---ccccccccccccccceeecccccccccccccchhhh
Confidence 22 23666777777777654432 2322221 2466788999999999999998 585 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 463 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~ 463 (676)
|++||+||+|||+.+|.++.++++++.+ + +|+|++|+|++ +++++..|..||++++|+||||+++|+.|++.+.
T Consensus 151 LaaGN~VVlkps~~~~~~~~~l~~~~~~----AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 226 (462)
T PF00171_consen 151 LAAGNTVVLKPSEQAPLTALLLAELLEE----AGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA 226 (462)
T ss_dssp HHTT-EEEEEEBTTSHHHHHHHHHHHHH----HTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH
T ss_pred hcccccceeeeccccccccccchhhccc----cccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc
Confidence 9999999999999999999999999987 6 99999999996 6778889999999999999999999999998873
Q ss_pred ---CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-------
Q 005798 464 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 532 (676)
Q Consensus 464 ---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 532 (676)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 227 ~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~l~~g~~~~~~ 305 (462)
T PF00171_consen 227 KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIY-DEFVEALKERVAKLRVGDPLDES 305 (462)
T ss_dssp TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHH-HHHHHHHHHHHHTSEBSSTTSTT
T ss_pred cccccccccccccceeeEecccccccccccccchhccccccccccccccccccccc-chhhhhhhhccccccccCCcccc
Confidence 9999999999999999999999999999999999988 999999999999999 7999999999987521
Q ss_pred ---------------------------EE-ecCc-----ccccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 ---------------------------GL-FGGP-----RASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 ---------------------------~~-~g~~-----~~~~~-~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+. ...++ + | | ++|++++||+||||++|++|+|+||
T Consensus 306 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 385 (462)
T PF00171_consen 306 TDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDE 385 (462)
T ss_dssp CSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHH
T ss_pred ccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchh
Confidence 22 3441 11122 2 5 2 4789999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCC-CcccCcccccccccccccccccchhcceeEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDG-ARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~-~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
||+++|+++|||++||||+|.++++++++++++|+|+||+++..... .||||.+.||+| +++|.+|+++|++.|+
T Consensus 386 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~ 461 (462)
T PF00171_consen 386 AIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG----REGGPEGLDEFTQIKT 461 (462)
T ss_dssp HHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES----EBSHHHHHHGTEEEEE
T ss_pred hhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC----cchHHHHHHHhCCccC
Confidence 99999999999999999999999999999999999999998766544 599999999987 3569999999999998
Q ss_pred E
Q 005798 651 I 651 (676)
Q Consensus 651 v 651 (676)
|
T Consensus 462 V 462 (462)
T PF00171_consen 462 V 462 (462)
T ss_dssp E
T ss_pred C
Confidence 6
No 93
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=2.5e-70 Score=609.67 Aligned_cols=395 Identities=20% Similarity=0.224 Sum_probs=336.6
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
+|.+|+.++++...+ .+++++++++|++||+ .|+.+|.++|.++|++++++|.+++++|++++.+|.++
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk--- 73 (457)
T cd07114 3 NPATGEPWARVPEAS------AADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGK--- 73 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence 467889999988888 8899999999999997 59999999999999999999999999999987665543
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
+... ...++..+++.+++++...+.. +...+. ...+...+++++|+|||++|+|| ||. +.++++++
T Consensus 74 ---~~~~------~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 142 (457)
T cd07114 74 ---LIRE------TRAQVRYLAEWYRYYAGLADKIEGAVIPV--DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAP 142 (457)
T ss_pred ---CHHH------HHHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 3211 1246777777787776443222 222111 01234567889999999999999 585 67899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|++ +.++++.|..|+++++|+||||+.+|+.+++.+
T Consensus 143 AL~aGN~Vilkps~~~p~~~~~l~~~l~~----aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~a 218 (457)
T cd07114 143 ALAAGNTVVLKPSEHTPASTLELAKLAEE----AGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218 (457)
T ss_pred HHhcCCeEEeECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 556788888899999999999999999999887
Q ss_pred ---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC-------
Q 005798 463 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG------- 531 (676)
Q Consensus 463 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~------- 531 (676)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|+|||+++| ++|+++|+++++++.
T Consensus 219 a~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~~ 297 (457)
T cd07114 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIY-DEFVERLVARARAIRVGDPLDP 297 (457)
T ss_pred HhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999887 999999999999999 799999999987652
Q ss_pred ---------------------------cEE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCH
Q 005798 532 ---------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 569 (676)
Q Consensus 532 ---------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~ 569 (676)
.++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 377 (457)
T cd07114 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDE 377 (457)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCH
Confidence 222 344321 12 33 5 2 36889999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEE
Q 005798 570 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 570 deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||.+.||+|. ++|++|+++||+.|
T Consensus 378 deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~k 453 (457)
T cd07114 378 EEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGR----ENGIEAIREYTQTK 453 (457)
T ss_pred HHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHHhcee
Confidence 99999999999999999999999999999999999999999987777788999999998763 56999999999999
Q ss_pred EEEE
Q 005798 650 WILR 653 (676)
Q Consensus 650 ~v~~ 653 (676)
++++
T Consensus 454 ~~~~ 457 (457)
T cd07114 454 SVWI 457 (457)
T ss_pred EEeC
Confidence 9863
No 94
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=3.6e-70 Score=602.60 Aligned_cols=376 Identities=17% Similarity=0.165 Sum_probs=310.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHh
Q 005798 257 MAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILA 336 (676)
Q Consensus 257 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (676)
.+++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+++.. ..++.. .|+...++.+++++
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~---~~ea~~-------~ev~~~i~~~~~~~ 72 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRS---RHETLL-------AEILPSIAGIKHAR 72 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHH-------HHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999998876420 012211 13444444454444
Q ss_pred ccccc-ccccc-cccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHH
Q 005798 337 DMEEP-IGQIL-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVIT 412 (676)
Q Consensus 337 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 412 (676)
+.... .+... .......+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.+|.|+..+++++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~ 152 (434)
T cd07133 73 KHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLA 152 (434)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 32110 11110 000000123457889999999999998 585 678999999999999999999999999999999998
Q ss_pred HhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcCCCCHHHHHH
Q 005798 413 SAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 489 (676)
Q Consensus 413 ~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~~ 489 (676)
+ ++|+|+||+|+|+.++++.|.+|+ +|+|+||||+++|+.|++.+ .+|+++|||||||+||++|||++.|++
T Consensus 153 ~----alP~g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~ 227 (434)
T cd07133 153 E----YFDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAE 227 (434)
T ss_pred H----hCCcCeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHH
Confidence 6 499999999997656778888775 99999999999999999877 389999999999999999999999999
Q ss_pred HHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcC--------------------------------cEEe-
Q 005798 490 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------------------------------VGLF- 535 (676)
Q Consensus 490 ~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~--------------------------------~~~~- 535 (676)
.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++. .+++
T Consensus 228 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~ 306 (434)
T cd07133 228 RIAFGKLLNAGQTCVAPDYVLVPEDKL-EEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIE 306 (434)
T ss_pred HHHHHHhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 99999999987 999999999999999 799999999887542 1222
Q ss_pred cCccc----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccC
Q 005798 536 GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 603 (676)
Q Consensus 536 g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~ 603 (676)
|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 307 gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~ 386 (434)
T cd07133 307 LNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTH 386 (434)
T ss_pred cCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC
Confidence 44321 12 33 5 2 368999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCC--CCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 604 SAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 604 ~G~v~iN~~~~--~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+|.|+||++.. ..+..||||.+.||+| +++|.+|+++||+.|+|+
T Consensus 387 ~G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 387 SGGVTINDTLLHVAQDDLPFGGVGASGMG----AYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cceEEECCcccccCCCCCCcCCCCcccCC----CcCCHHHHHHhcccceec
Confidence 99999998753 3367899999999986 356999999999999874
No 95
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=4.8e-70 Score=604.87 Aligned_cols=394 Identities=20% Similarity=0.211 Sum_probs=328.0
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|+++ |+.+|.++|.++|++++++|++++++|++++..|.+++..
T Consensus 5 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 73 (451)
T cd07146 5 NPYTGEVVGTVPAGT------EEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLK-- 73 (451)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH--
Confidence 467888888887777 78999999998875 8889999999999999999999999999998877654321
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccc--cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..|+...++.+++++.... ..++..+... ...+...+.+++|+|||++|+|| +|. +.+++++|
T Consensus 74 --~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 143 (451)
T cd07146 74 --DT--------RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAP 143 (451)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHH
Confidence 21 1356666666666654322 1122111100 01234567889999999999999 585 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|+++..+.+++.+ + +|+|+||++++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 144 ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a 219 (451)
T cd07146 144 AIAANNRIVLKPSEKTPLSAIYLADLLYE----AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATA 219 (451)
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999886 7 99999999995 556788889999999999999999999999877
Q ss_pred C-CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 ~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 220 ~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 298 (451)
T cd07146 220 GYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA-DEFVDLLVEKSAALVVGDPMDPAT 298 (451)
T ss_pred cCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHH-HHHHHHHHHHHhcCCCCCCCCCCC
Confidence 4 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred --------------------------EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHc
Q 005798 533 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 578 (676)
Q Consensus 533 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~ 578 (676)
++ .|+.....++ | | +++.+++||+||||++|++|+|+||||+++|+
T Consensus 299 ~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~ 378 (451)
T cd07146 299 DMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNS 378 (451)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhC
Confidence 11 1222111233 5 2 36789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 579 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 579 ~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
++|||++||||+|.++++++++++++|+|+||+.+.. .+..||||.|.||+++ +++|++|+++||+.|+++
T Consensus 379 ~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g---~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 379 TAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGG---KEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCc---ccChHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999986544 3568999999998531 356899999999999985
No 96
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=4.7e-70 Score=602.83 Aligned_cols=377 Identities=18% Similarity=0.211 Sum_probs=307.2
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
.+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++.+|++++. .++.. ..+.+.++
T Consensus 35 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~----~ea~~-------~~~~~~~~ 103 (465)
T PRK15398 35 FASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGR----VEDKI-------AKNVAAAE 103 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc----HHHHH-------HHHHHHHH
Confidence 66999999999999999999999999999999999999999999999887665432 12211 11222222
Q ss_pred HHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005798 331 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 408 (676)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 408 (676)
.++ +.....+.... ..+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+..++
T Consensus 104 ~~~---~~~~~~~~~~~----~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~ 176 (465)
T PRK15398 104 KTP---GVEDLTTEALT----GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAI 176 (465)
T ss_pred Hhc---cccccccCccc----CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHH
Confidence 110 00000011110 1123456788999999999999 595 67899999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHH
Q 005798 409 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 486 (676)
Q Consensus 409 ~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~ 486 (676)
++++++|.++ +|+|++|+|++ +.+.++.|..||+||+|+||||+++|+.|++ +.+|+++|||||||+||++|||||+
T Consensus 177 ~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-~~k~~~~elGGk~p~IV~~dADld~ 255 (465)
T PRK15398 177 ELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-SGKKAIGAGAGNPPVVVDETADIEK 255 (465)
T ss_pred HHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-cCCceeeecCCCceEEEecCCCHHH
Confidence 9999988889 99999999995 5567778888999999999999999999998 6899999999999999999999999
Q ss_pred HHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHH------------HHhc----C--c-E-EecCcc------
Q 005798 487 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE------------LQHE----G--V-G-LFGGPR------ 539 (676)
Q Consensus 487 A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~------------~~~~----~--~-~-~~g~~~------ 539 (676)
|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ +.++ + . + +.|+..
T Consensus 256 Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~-d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~ 334 (465)
T PRK15398 256 AARDIVKGASFDNNLPCIAEKEVIVVDSVA-DELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA 334 (465)
T ss_pred HHHHHHHhcccCCCCcCCCCceEEEeHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHh
Confidence 99999999999988 999999999999999 7999999872 2211 1 0 1 123221
Q ss_pred ccccc----c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCc--eeEEEecCHHHHHHHHhccCeeeE
Q 005798 540 ASKLL----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVDSAAV 607 (676)
Q Consensus 540 ~~~~~----p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL--~a~vft~d~~~a~~~~~~l~~G~v 607 (676)
...++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++++|+|
T Consensus 335 ~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V 414 (465)
T PRK15398 335 AGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIF 414 (465)
T ss_pred CCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEE
Confidence 01222 3 2 4689999999999999999999999999999999998 999999999999999999999999
Q ss_pred EEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEEcC
Q 005798 608 FHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 608 ~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 655 (676)
+||.++. +.+||||.+.|. .+.+|+.| ...|..|++.++.
T Consensus 415 ~iN~~~~--~~~p~gg~~~s~-----~~~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 415 VKNGPSY--AGLGLGGEGFTT-----FTIATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred EECCCCc--cccCcCCCCCce-----eeecccCC-CCccchhhhhhhe
Confidence 9998753 567898766543 34568999 9999999987754
No 97
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=1.2e-69 Score=604.57 Aligned_cols=396 Identities=19% Similarity=0.258 Sum_probs=332.2
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|.+++..
T Consensus 5 ~P~tg~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 76 (453)
T cd07149 5 SPYDGEVIGRVPVAS------EEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIK-- 76 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHH--
Confidence 467888888888877 889999999999999999999999999999999999999999999998877655432
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccc--cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
++ ..|+...++.++++++..+ ..++..+... ...+...+.+++|+|||++|+|| +|. +.++++++
T Consensus 77 --~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ 146 (453)
T cd07149 77 --DA--------RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGP 146 (453)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHH
Confidence 11 1245555555555443221 1122111100 01123457789999999999998 585 66899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ .++++..|..||++|+|+||||+++|+.|++.+
T Consensus 147 ALaaGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 222 (453)
T cd07149 147 AIAAGNAVVLKPASQTPLSALKLAELLLE----AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKA 222 (453)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHc
Confidence 99999999999999999999999999986 7 99999999996 555678888899999999999999999999887
Q ss_pred C-CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 ~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 223 ~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 301 (453)
T cd07149 223 GLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIY-DEFLERFVAATKKLVVGDPLDEDT 301 (453)
T ss_pred CCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHH-HHHHHHHHHHHHhCCcCCCCCCCC
Confidence 5 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred --------------------------EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHc
Q 005798 533 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 578 (676)
Q Consensus 533 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~ 578 (676)
++ +|+.....++ | | +++.+++||+||||++|++|+|+||||+++|+
T Consensus 302 ~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 381 (453)
T cd07149 302 DVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMAND 381 (453)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhC
Confidence 11 2332222233 5 2 35789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 579 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 579 ~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
++|||++||||+|.+++.++++++++|.|+||+++.. .+..||||.+.||+| +++|++|+++|++.|+++
T Consensus 382 ~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 382 SPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG----REGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999987654 467899999999986 356999999999999985
No 98
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=6.4e-70 Score=600.11 Aligned_cols=374 Identities=17% Similarity=0.143 Sum_probs=311.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHH
Q 005798 253 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 332 (676)
Q Consensus 253 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (676)
|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|++++.. ++ ..|+..++..+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea--------~~ev~~~~~~~ 68 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLW----EA--------QTEVAAMAGKI 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999998877655431 22 12455555555
Q ss_pred HHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005798 333 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 409 (676)
Q Consensus 333 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 409 (676)
++++.... ..+..... ..+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|+++..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~ 145 (431)
T cd07095 69 DISIKAYHERTGERATP---MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVE 145 (431)
T ss_pred HHHHHHHHHhcCCcccC---CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHH
Confidence 55443221 11211111 1234567889999999999999 586 567999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc----CCCEEeecCCcceEEEcCCCCH
Q 005798 410 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----KIPVLGHADGICHVYVDKSANL 484 (676)
Q Consensus 410 l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a----~~~~~lElGGk~p~iV~~dADl 484 (676)
++.+ + +|+|++|+|+|+.+.++.|..||+||+|+||||+++|+.|++.+ .+|++||||||||+||++|||+
T Consensus 146 ~~~~----ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl 221 (431)
T cd07095 146 LWEE----AGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADI 221 (431)
T ss_pred HHHH----hCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCH
Confidence 9986 7 99999999997556788888999999999999999999998864 3789999999999999999999
Q ss_pred HHHHHHHHHhcCCCCc-cccccceEEEeCc-cCChhHHHHHHHHHHhcCc------------------------------
Q 005798 485 DVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV------------------------------ 532 (676)
Q Consensus 485 ~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~~------------------------------ 532 (676)
|.|++.+++++|.|+| .|++++|+|||++ +| |+|+++|+++++++.+
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~ 300 (431)
T cd07095 222 DAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVG-DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLL 300 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchH-HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 9999999999999987 9999999999999 99 7999999999987632
Q ss_pred ----EE-ecCccc--cc-cc-c-C----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHH
Q 005798 533 ----GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 598 (676)
Q Consensus 533 ----~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~ 598 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 301 ~~ga~~l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~ 380 (431)
T cd07095 301 ALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERF 380 (431)
T ss_pred hcCCEEEeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHH
Confidence 11 132211 12 33 5 2 3589999999999999999999999999999999999999999999999999
Q ss_pred HhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 599 LCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 599 ~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
++++++|+|+||+++.. .+..||||.|.||+| ++.|++|+++ +..|++
T Consensus 381 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~-~~~~~~ 429 (431)
T cd07095 381 LARIRAGIVNWNRPTTGASSTAPFGGVGLSGNH----RPSAYYAADY-CAYPVA 429 (431)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCcccccCC----CCChHHHHHH-Hhhhhc
Confidence 99999999999986544 356899999999886 3568999994 444543
No 99
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=2e-69 Score=602.64 Aligned_cols=395 Identities=19% Similarity=0.184 Sum_probs=333.8
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (455)
T cd07093 3 NPATGEVLAKVPEGG------AAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPIT-- 74 (455)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--
Confidence 356888889887777 889999999999999999999999999999999999999999999998877654421
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++. ..++...++.++++++.... .+...+ ...+...+.+++|+|||++|+|| +|. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL 142 (455)
T cd07093 75 --LAR-------TRDIPRAAANFRFFADYILQLDGESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPAL 142 (455)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHhHHHhCCcccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHH
Confidence 111 12455566666665543211 111111 11244567889999999999998 585 5689999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 463 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 463 (676)
++||+||+|||+.+|+++..+.+++.+ + +|+|+||+|++ +.++++.|..|++||+|+||||+.+|+.|++.+.
T Consensus 143 ~aGN~VIlkps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~ 218 (455)
T cd07093 143 AFGNTVVLKPSEWTPLTAWLLAELANE----AGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP 218 (455)
T ss_pred hcCCEEEeECCCcCcHHHHHHHHHHHh----cCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999986 7 99999999996 5567888888999999999999999999998773
Q ss_pred --CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 464 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 464 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
+|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 297 (455)
T cd07093 219 NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIY-DEFLERFVERAKALKVGDPLDPDT 297 (455)
T ss_pred cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 9999999999999999999999999999999999977 999999999999999 7999999999876521
Q ss_pred --------------------------EE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 377 (455)
T cd07093 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEE 377 (455)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHH
Confidence 12 233221 12 23 5 2 3688999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
||+++|+++|||++||||+|.++++++++++++|+|+||++.......||||.+.||+|. ++|++|+++|++.|++
T Consensus 378 ai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~----~~g~~~~~~~~~~k~~ 453 (455)
T cd07093 378 AIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGR----EGGDYSLEFYTELKNV 453 (455)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCC----CchHHHHHHHhceeEE
Confidence 999999999999999999999999999999999999999987766778999999998862 5699999999999998
Q ss_pred EE
Q 005798 652 LR 653 (676)
Q Consensus 652 ~~ 653 (676)
++
T Consensus 454 ~~ 455 (455)
T cd07093 454 CI 455 (455)
T ss_pred eC
Confidence 53
No 100
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=2.8e-69 Score=597.80 Aligned_cols=377 Identities=21% Similarity=0.241 Sum_probs=318.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHH
Q 005798 253 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 332 (676)
Q Consensus 253 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (676)
|+++++++|++||+.|+++|.++|.++|++++++|++++++|+++++.|++++.. ++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRP----KA--------AFEVGAAIAIL 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999998877654321 11 13566677777
Q ss_pred HHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHH-HHHHH
Q 005798 333 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRS-NAILH 408 (676)
Q Consensus 333 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t-~~~l~ 408 (676)
++++...+ ..+...+.. ..+...+.+++|+|||++|+|| +|. ..++++++||++||+||+|||+.+|.+ +..+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~ 146 (431)
T cd07104 69 REAAGLPRRPEGEILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA 146 (431)
T ss_pred HHHHHHHHHhcCccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH
Confidence 76654332 222222211 1244567889999999999998 585 567999999999999999999999998 56788
Q ss_pred HHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCCCC
Q 005798 409 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSAN 483 (676)
Q Consensus 409 ~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dAD 483 (676)
+++.+ + +|+|++|+|++ +.++++.|..||++|+|+||||+++|+.|+++++ +|+++|||||||+||++|||
T Consensus 147 ~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 222 (431)
T cd07104 147 EIFEE----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDAD 222 (431)
T ss_pred HHHHH----cCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCC
Confidence 88875 7 99999999995 5557888888999999999999999999998763 89999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------------------------------
Q 005798 484 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------ 532 (676)
Q Consensus 484 l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------ 532 (676)
++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 223 l~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~ 301 (431)
T cd07104 223 LDLAVSAAAFGAFLHQGQICMAAGRILVHESVY-DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAV 301 (431)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999887 999999999999999 7999999999887632
Q ss_pred ----EE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHh
Q 005798 533 ----GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 600 (676)
Q Consensus 533 ----~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~ 600 (676)
++ +|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus 302 ~~G~~~~~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 381 (431)
T cd07104 302 AAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAE 381 (431)
T ss_pred HCCCEEEeCCCCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 11 1322211223 5 2 357899999999999999999999999999999999999999999999999999
Q ss_pred ccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 601 QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 601 ~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
++++|.|+||+++... +.+||||.+.||+| +++|++|+++|++.|+++
T Consensus 382 ~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 382 RLETGMVHINDQTVNDEPHVPFGGVKASGGG----RFGGPASLEEFTEWQWIT 430 (431)
T ss_pred hcCcCeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceeEEe
Confidence 9999999999987554 67899999999865 356999999999999985
No 101
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=2.6e-69 Score=598.35 Aligned_cols=379 Identities=16% Similarity=0.165 Sum_probs=317.0
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHH--hcCCHHHH----HHHHHHHHHHHHHc--HHHHHHHHHH
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDR----RKILLDVADALEAN--ESLIKVENEA 300 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~~l~~~~~~ 300 (676)
.+|.+++.++++..++ .+|+++++++|++||+.| +.++..+| .++|+++++.|+++ .++|++++++
T Consensus 17 ~nP~t~~~i~~~~~a~------~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~ 90 (489)
T cd07126 17 LDPLNGDKFISVPDTD------EDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQR 90 (489)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4578899999988888 889999999999999998 55778999 89999999999999 4999999877
Q ss_pred HHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCCC-hh-h
Q 005798 301 DVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-A 377 (676)
Q Consensus 301 d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~-~ 377 (676)
|+||+. .++ ..|+..+++.+++|++..+ ..+..........+...+++|+|+|||++|+||| |. +
T Consensus 91 e~GK~~----~~a--------~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 91 VAPKSD----AQA--------LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred HcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 655432 121 3578899999999986543 2233211000112345688999999999999995 85 6
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHH
Q 005798 378 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 455 (676)
Q Consensus 378 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g 455 (676)
.+++++|||++||+||+||||.||+++.+|++++.+ + ||+|+||+|+| +++.+. +..|++||+|+||||+++|
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~----aGlP~gv~~vv~G~~~~~~~-l~~~~~v~~V~FTGS~~vG 233 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL----CGMPATDVDLIHSDGPTMNK-ILLEANPRMTLFTGSSKVA 233 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCcCcCcEEEEeCCchhHHH-HhcCCCCCEEEEECCHHHH
Confidence 789999999999999999999999999999999986 7 99999999996 455555 5568899999999999999
Q ss_pred HHHHHhcCCCEEeecCCcceEEEcCCC-CHHHHHHHHHHhcCCCCc-cccccceEEEeCcc-CChhHHHHHHHHHHhcC-
Q 005798 456 SQIKESTKIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL-ACNGALNELVVELQHEG- 531 (676)
Q Consensus 456 ~~i~~~a~~~~~lElGGk~p~iV~~dA-Dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i-~d~~f~~~l~~~~~~~~- 531 (676)
++|+..+++++.+|+|||||+||++|| |+|.|++.+++|+|.|+| +|+|++|+|||+++ + |+|+++|++.++++.
T Consensus 234 r~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~-d~f~~~l~~~~~~~~~ 312 (489)
T cd07126 234 ERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQ-AGILDKLKALAEQRKL 312 (489)
T ss_pred HHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchH-HHHHHHHHHHHHhccc
Confidence 999988888999999999999999999 999999999999999987 99999999999994 7 699999999876542
Q ss_pred ----------------------------cEE-ecCccc------c--ccc-c--C--C--------CCCcccccccCceE
Q 005798 532 ----------------------------VGL-FGGPRA------S--KLL-Q--I--P--------ETRLFHHEYNSMVC 561 (676)
Q Consensus 532 ----------------------------~~~-~g~~~~------~--~~~-p--v--~--------~~~~~~eE~FGPVl 561 (676)
.++ +|+... . +++ | + + +|++++||+||||+
T Consensus 313 g~~~~Gpli~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl 392 (489)
T cd07126 313 EDLTIGPVLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQ 392 (489)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEE
Confidence 222 244321 1 234 5 2 1 57899999999999
Q ss_pred EEEEeCC--HHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeee--EEEcCCCCCCCC----CcccCcccccccc
Q 005798 562 TVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA--VFHNASTRFCDG----ARFGLGAEVGIST 631 (676)
Q Consensus 562 ~i~~~~~--~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~--v~iN~~~~~~~~----~pfG~g~~~G~~~ 631 (676)
+|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||+.+...+. .||||.|.||+|+
T Consensus 393 ~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~ 470 (489)
T cd07126 393 VVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGT 470 (489)
T ss_pred EEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCC
Confidence 9999999 99999999999999999999999999999999999999 668877655433 8999999998864
No 102
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=3.5e-69 Score=602.96 Aligned_cols=398 Identities=20% Similarity=0.230 Sum_probs=334.1
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQAL-QSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.+|.+|+.++++...+ .+++++++++|++||+.|+++ |.++|.++|++++++|++++++|++++.+|++++..
T Consensus 21 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ 94 (473)
T cd07082 21 YSPIDGEVIGSVPALS------ALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLK 94 (473)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 4577888889888877 789999999999999999999 999999999999999999999999999887765532
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-cccccccccc--CCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHH
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 382 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 382 (676)
++. .|+...++.++++++..+. .+...+.... ..+...+.+++|+|||++|+|| +|. +.++++
T Consensus 95 ----~a~--------~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 162 (473)
T cd07082 95 ----DAL--------KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKL 162 (473)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHH
Confidence 111 2445555555554432211 1221111000 1234567889999999999998 485 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHH
Q 005798 383 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 460 (676)
Q Consensus 383 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 460 (676)
++||++||+||+|||+.+|.++..+++++.+ + +|+|++|++++ +.++++.|..||++|+|+||||+++|+.|++
T Consensus 163 ~~AL~aGN~vilKps~~~~~~~~~l~~~l~~----aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 238 (473)
T cd07082 163 IPALIMGNTVVFKPATQGVLLGIPLAEAFHD----AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK 238 (473)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999995 5567888888999999999999999999998
Q ss_pred hc-CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc------
Q 005798 461 ST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 532 (676)
Q Consensus 461 ~a-~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 532 (676)
.+ .+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|.++++++.+
T Consensus 239 ~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~~~~~ 317 (473)
T cd07082 239 QHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVA-DELVELLKEEVAKLKVGMPWDN 317 (473)
T ss_pred HhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 87 59999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCccccc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 533 ----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 533 ----------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
++ .|+....+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 318 ~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~ 397 (473)
T cd07082 318 GVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIEL 397 (473)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHH
Confidence 11 13322212 22 5 2 35789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+|+++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.++||+| +++|++|+++||+.|++++
T Consensus 398 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g----~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 398 ANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG----TQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC----CCChHHHHHHhhceeEEEE
Confidence 9999999999999999999999999999999999997644 356899999999987 3569999999999999875
No 103
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.3e-70 Score=554.10 Aligned_cols=383 Identities=20% Similarity=0.230 Sum_probs=329.8
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHH
Q 005798 253 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 332 (676)
Q Consensus 253 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (676)
.+++.++++|.+|.+-++.|.+.|.++|+++...+++|+++|.+++.+|+.+.+. ++...++....+++.++++.+
T Consensus 3 ~~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~----es~~~Ev~~~~~~i~~~l~~L 78 (477)
T KOG2456|consen 3 AISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPEL----ESYLNEVGYVLNEIRYALENL 78 (477)
T ss_pred cHHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchh----HHHHHHHHHHHHHHHHHHHhh
Confidence 3456689999999999999999999999999999999999999999999987654 455566666778999999999
Q ss_pred HHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005798 333 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 410 (676)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l 410 (676)
..|....+.. ..... . -.+.+++.+|+|||++|+|| ||. +++.++++|||||||||+||||.+|.++..++++
T Consensus 79 ~~wv~~~~v~-~~~~t--~--~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakl 153 (477)
T KOG2456|consen 79 PEWVKPEPVK-KSFLT--F--LDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKL 153 (477)
T ss_pred HHhccccccC-ccccc--c--cCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHH
Confidence 9988643221 11111 1 13467889999999999999 584 7789999999999999999999999999999999
Q ss_pred HHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCCCCHHH
Q 005798 411 ITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 486 (676)
Q Consensus 411 ~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~ 486 (676)
+-+ +|+++++.||.| .+++.++|.+ ++|+|+||||+++||.||.+|+ +||+||||||+|++|++|+|++-
T Consensus 154 lp~----Yld~~~~~VV~Ggv~ETt~LL~~--rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~i 227 (477)
T KOG2456|consen 154 LPQ----YLDQDLIRVVNGGVPETTELLKQ--RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKI 227 (477)
T ss_pred HHH----hcCcceEEEecCCCchHHHHHHh--hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHH
Confidence 986 599999999995 6788899874 7999999999999999998873 99999999999999999999999
Q ss_pred HHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhc-Cc----------------------------EE-e
Q 005798 487 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-GV----------------------------GL-F 535 (676)
Q Consensus 487 A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-~~----------------------------~~-~ 535 (676)
|+++|+||++.|+| +|+|+++++++.+++ +.++++++..+++. |- ++ .
T Consensus 228 a~~RI~~gk~~N~GQtCvapDYiL~~k~~~-~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~~ 306 (477)
T KOG2456|consen 228 AARRIAWGKWMNSGQTCVAPDYILCSKSIQ-PKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVAI 306 (477)
T ss_pred HHHHHHHHhhccCCCeeccCCeEEecHhhh-HHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCceec
Confidence 99999999999988 999999999999999 89999999888764 10 11 2
Q ss_pred cCccc--cccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeee
Q 005798 536 GGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA 606 (676)
Q Consensus 536 g~~~~--~~~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~ 606 (676)
||... ..++ | | .++++|+||+|||||||+.|+|+||+|+.+|+.+.+|++|+||+|.+...||.+++.+|.
T Consensus 307 Gg~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGg 386 (477)
T KOG2456|consen 307 GGESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGG 386 (477)
T ss_pred CCccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCC
Confidence 33322 1233 4 2 367899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEEEEEEcC
Q 005798 607 VFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 607 v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 655 (676)
|.+|+.... ...+||||.++||+| ++||.+|++.|++.|++..+.
T Consensus 387 vt~ND~i~H~~~~~lPFGGVG~SGmG----~YhGK~sFdTFSH~k~~l~rs 433 (477)
T KOG2456|consen 387 VTVNDVIMHVTLDSLPFGGVGESGMG----RYHGKFSFDTFSHEKSCLLRS 433 (477)
T ss_pred eeecceEEEEEeeccCcCCcCccccc----cccccccccccccchhhhhcc
Confidence 999996533 467899999999886 367999999999999987653
No 104
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=3.1e-69 Score=600.63 Aligned_cols=394 Identities=18% Similarity=0.197 Sum_probs=335.3
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 309 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 309 (676)
+|.+|+.++++...+ .+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++..|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 74 (451)
T cd07103 3 NPATGEVIGEVPDAG------AADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLA-- 74 (451)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 467888899988777 889999999999999999999999999999999999999999999998877654432
Q ss_pred hhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005798 310 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 386 (676)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 386 (676)
++ ..|+...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| +|. ..++++++||
T Consensus 75 --~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (451)
T cd07103 75 --EA--------RGEVDYAASFLEWFAEEARRIYGRTIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPAL 142 (451)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHH
Confidence 21 1356666777776654322 223222211 1234567889999999999998 586 4578999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005798 387 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 462 (676)
Q Consensus 387 aaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 462 (676)
++||+||+|||+.+|.++..+.+++.+ + +|+|++|+|++ +.+.++.|..|++||+|+||||+.+|+.+++.+
T Consensus 143 ~aGN~VIlKps~~~~~~~~~l~~~l~~----aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~ 218 (451)
T cd07103 143 AAGCTVVLKPAEETPLSALALAELAEE----AGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD 218 (451)
T ss_pred HcCCEEEEECCccCcHHHHHHHHHHHH----cCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999986 7 99999999995 556778788899999999999999999999876
Q ss_pred -CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 463 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 463 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~ 297 (451)
T cd07103 219 TVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIY-DEFVEKLVERVKKLKVGNGLDEGT 297 (451)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999886521
Q ss_pred --------------------------EE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 005798 533 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 575 (676)
Q Consensus 533 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~ 575 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 377 (451)
T cd07103 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIAR 377 (451)
T ss_pred CCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHH
Confidence 12 233221 12 33 5 2 36789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 576 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 576 aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+|+++|||++||||+|.++++++++++++|.|+||++....+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 378 ~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 378 ANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLG----REGGKEGLEEYLETKYVS 450 (451)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999998766677899999999876 356999999999999975
No 105
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=2.3e-69 Score=603.64 Aligned_cols=407 Identities=17% Similarity=0.184 Sum_probs=338.4
Q ss_pred HHHHHHHHHcCC---cEEEEeCCC-----cchHHHHHhC-CceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHH
Q 005798 204 VNAAYCAACAGI---PVVITSGFA-----MDSIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQ 274 (676)
Q Consensus 204 ~~aa~~a~~~gv---~v~I~~g~~-----~~~i~~~~tg-~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~ 274 (676)
+++++...+.++ |.+| +|.. .-.+.+|.++ +.++++...+ .+|+++++++|++||+.|+++|..
T Consensus 24 ~~~~~~~~~~~~~~~~~~i-~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~------~~dv~~av~~A~~a~~~W~~~~~~ 96 (500)
T TIGR01238 24 LEAQIHAWADKTWQAAPII-GHSYKADGEAQPVTNPADRRDIVGQVFHAN------LAHVQAAIDSAQQAFPTWNATPAK 96 (500)
T ss_pred HHHHHHHHhcCceecCceE-CCEEecCCCeEEeeCCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHH
Confidence 446666666663 4433 4331 1234678885 6889888877 889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhcccccccccccccccCCC
Q 005798 275 DRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADG 354 (676)
Q Consensus 275 ~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (676)
+|.++|++++++|++++++|++++++|++++.. ++ ..|+..+++.++++++..+.. . +
T Consensus 97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a--------~~ev~~~i~~l~~~a~~~~~~---~-------~ 154 (500)
T TIGR01238 97 ERAAKLDRLADLLELHMPELMALCVREAGKTIH----NA--------IAEVREAVDFCRYYAKQVRDV---L-------G 154 (500)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHHHHHHHHh---c-------C
Confidence 999999999999999999999998876654321 22 247888888888887543210 0 1
Q ss_pred cEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-C
Q 005798 355 LILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R 430 (676)
Q Consensus 355 ~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~ 430 (676)
...++|+|||++|+|| +|. +.++++++||++||+||+|||+.||+++..+++++.+ + +|+|+||+|+| +
T Consensus 155 ---~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~ 227 (500)
T TIGR01238 155 ---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQE----AGFPAGTIQLLPGRG 227 (500)
T ss_pred ---ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHH----cCCCCCceEEEecCc
Confidence 1358999999999999 586 5689999999999999999999999999999999886 7 99999999996 4
Q ss_pred ChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC------CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-ccc
Q 005798 431 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACN 503 (676)
Q Consensus 431 ~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~ 503 (676)
.++++.|..||+||+|+||||+.+|+.|++.++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+
T Consensus 228 ~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~ 307 (500)
T TIGR01238 228 ADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCS 307 (500)
T ss_pred chHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 567888889999999999999999999998662 6999999999999999999999999999999999987 999
Q ss_pred ccceEEEeCccCChhHHHHHHHHHHhcCc----------------------------------EEe----cCcc--ccc-
Q 005798 504 AMETLLVHKDLACNGALNELVVELQHEGV----------------------------------GLF----GGPR--ASK- 542 (676)
Q Consensus 504 a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----------------------------------~~~----g~~~--~~~- 542 (676)
|++|+|||+++| |+|+++|+++++++++ .+. ++.+ ..+
T Consensus 308 a~~rv~V~~~i~-d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~ 386 (500)
T TIGR01238 308 ALRVLCVQEDVA-DRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGT 386 (500)
T ss_pred CCceeEEcHhhH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCe
Confidence 999999999999 7999999999887632 111 1100 012
Q ss_pred cc-c-C---CCCCcccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC
Q 005798 543 LL-Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF 615 (676)
Q Consensus 543 ~~-p-v---~~~~~~~eE~FGPVl~i~~~~--~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~ 615 (676)
++ | | +++.+++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++.++++++++|+|+||+....
T Consensus 387 f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~ 466 (500)
T TIGR01238 387 FVAPTLFELDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVG 466 (500)
T ss_pred eEcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 23 5 3 467899999999999999998 799999999999999999999999999999999999999999987643
Q ss_pred C--CCCcccCcccccccccccccccccchhcceeEEE
Q 005798 616 C--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 616 ~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
. +..||||.+.||+|. +++|++++++|++.|+
T Consensus 467 ~~~~~~PfGG~k~SG~G~---~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 467 AVVGVQPFGGQGLSGTGP---KAGGPHYLYRLTQVQY 500 (500)
T ss_pred CCCCCCCCCccccccCCC---ccCCHHHHHHHHhhcC
Confidence 2 447999999998862 2568999999999874
No 106
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=6.1e-69 Score=616.17 Aligned_cols=395 Identities=17% Similarity=0.168 Sum_probs=323.5
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.+|.+|+.++++...+ . |+++|+++|++| |+.|+++|.++|.++|++++++|++|+++|++ +++|+||+.
T Consensus 20 ~nP~tg~~i~~~~~~~------~-dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~- 90 (663)
T TIGR02278 20 RDASTGEVLARVTSEG------L-DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATR- 90 (663)
T ss_pred cCCCCCCEEEEEcCCc------H-HHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCH-
Confidence 4577888888876555 4 899999999996 99999999999999999999999999999998 455543332
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc---------ccccccccccCCCcEEEEEeece-eEEEEEcCCC-hh
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFESR-PD 376 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~~-P~ 376 (676)
.++ ..|+..+++.+++++...+. .|+..+.. ...+...+++|+|+ |||++|+||| |.
T Consensus 91 ---~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN~P~ 158 (663)
T TIGR02278 91 ---RDN--------WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFNFPV 158 (663)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCchHH
Confidence 121 23778888888888764432 12222210 01122457889998 9999999995 85
Q ss_pred -hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHH
Q 005798 377 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKL 454 (676)
Q Consensus 377 -~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~ 454 (676)
+.+++++|||++||+||+|||+.||+++..+++++.++ . +|+|+||+|+|. .++++..++++|+|+||||+++
T Consensus 159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~a---G~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~~ 233 (663)
T TIGR02278 159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVES---GLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAAT 233 (663)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh---CCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHHH
Confidence 67899999999999999999999999999999999873 4 899999999963 2334444467999999999999
Q ss_pred HHHHHHhc-----CCCEEeecCCcceEEEcCCCC-----HHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHH
Q 005798 455 VSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNEL 523 (676)
Q Consensus 455 g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l 523 (676)
|++|++.+ .+|+++|||||||+||++||| +|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|
T Consensus 234 G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~l 312 (663)
T TIGR02278 234 ADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALL-EAVLKAL 312 (663)
T ss_pred HHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHH-HHHHHHH
Confidence 99999853 389999999999999999999 99999999999999988 999999999999999 7999999
Q ss_pred HHHHHhcCc----------------------------------EE-ecCccc-cc-cc-c-C-----CCC-CcccccccC
Q 005798 524 VVELQHEGV----------------------------------GL-FGGPRA-SK-LL-Q-I-----PET-RLFHHEYNS 558 (676)
Q Consensus 524 ~~~~~~~~~----------------------------------~~-~g~~~~-~~-~~-p-v-----~~~-~~~~eE~FG 558 (676)
+++++++.+ ++ +|+... .+ ++ | | ++| .+++||+||
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FG 392 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFG 392 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccC
Confidence 999987632 12 244322 13 33 5 2 244 689999999
Q ss_pred ceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhcc--CeeeEEE-cCCC--------CCCCCCcccCcccc
Q 005798 559 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFH-NAST--------RFCDGARFGLGAEV 627 (676)
Q Consensus 559 PVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l--~~G~v~i-N~~~--------~~~~~~pfG~g~~~ 627 (676)
||++|++|+|+||||+++|+++|||++||||+|.++++++++++ ++|+||| |.+. ...+.+||||.|.|
T Consensus 393 PVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~S 472 (663)
T TIGR02278 393 PVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRA 472 (663)
T ss_pred CeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999 8999999 6421 11256799999999
Q ss_pred ccccccccc-ccccchhcceeEEEEEEc
Q 005798 628 GISTSRIHA-RGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 628 G~~~~~~~~-~g~~g~~~ft~~k~v~~~ 654 (676)
|+|+ + +|.+++++|++.|+|...
T Consensus 473 G~G~----~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 473 GGGE----ELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred cCCC----ccchHHHHHHhceeEEEEcC
Confidence 9863 4 357999999999998764
No 107
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=5.5e-69 Score=600.44 Aligned_cols=392 Identities=18% Similarity=0.195 Sum_probs=319.3
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.+|.+|+.++++.. . .+|+++|+++|++| |+.|+++|.++|+++|++++++|++|+++|+++ +.|++++.
T Consensus 20 ~nP~tg~~~~~~~~-~------~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~- 90 (513)
T cd07128 20 HDAVTGEVVARVSS-E------GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATR- 90 (513)
T ss_pred ECCCCCCEEEEEcC-C------HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCH-
Confidence 45778888888764 4 45899999999998 799999999999999999999999999999985 65554332
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc---------cccccccccCCC-cEEEEEeec-eeEEEEEcCC-Ch
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI---------GQILKRTELADG-LILEKTSCP-LGVLLIVFES-RP 375 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~P-lGVV~~I~p~-~P 375 (676)
.++ ..|+...++.++++++..+.. ++..+. ...+ ...+++++| +|||++|+|| ||
T Consensus 91 ---~ea--------~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~~GVv~~I~pwN~P 157 (513)
T cd07128 91 ---RDS--------WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPL--SKDGTFVGQHILTPRRGVAVHINAFNFP 157 (513)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhhccccccccCCccccc--CCCccccceEEEEecccEEEEECCcccH
Confidence 122 136667777777766543221 111111 0111 134577999 5999999999 58
Q ss_pred h-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCH
Q 005798 376 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSN 452 (676)
Q Consensus 376 ~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~ 452 (676)
. +.+++++|||++||+||+|||+.||+++..+++++.++ . +|+|+||+|+| +..+++.+ +.+|+|+||||+
T Consensus 158 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---G~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~ 231 (513)
T cd07128 158 VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVES---GLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSA 231 (513)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CCCCCCcEEEecCChHHHhccc---CCCCEEEEECCH
Confidence 5 67899999999999999999999999999999999873 3 79999999996 33333333 468999999999
Q ss_pred HHHHHHHHhc-----CCCEEeecCCcceEEEcCCCC-----HHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHH
Q 005798 453 KLVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALN 521 (676)
Q Consensus 453 ~~g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~ 521 (676)
++|++|++.+ .+|++||||||||+||++||| +|.|++.+++++|.|+| +|++++|+|||+++| |+|++
T Consensus 232 ~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~ 310 (513)
T cd07128 232 ATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARV-DAVIE 310 (513)
T ss_pred HHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHH-HHHHH
Confidence 9999999863 389999999999999999999 99999999999999987 999999999999999 79999
Q ss_pred HHHHHHHhcCc---------------------------------EE-ecCccc---------cc-cc-c-C-----C--C
Q 005798 522 ELVVELQHEGV---------------------------------GL-FGGPRA---------SK-LL-Q-I-----P--E 548 (676)
Q Consensus 522 ~l~~~~~~~~~---------------------------------~~-~g~~~~---------~~-~~-p-v-----~--~ 548 (676)
+|+++++++.+ ++ +|+... .+ |+ | | + +
T Consensus 311 ~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 390 (513)
T cd07128 311 ALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAA 390 (513)
T ss_pred HHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCccc
Confidence 99999987631 12 354321 13 33 5 2 2 2
Q ss_pred CCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccC--eeeEEEcCCCC---------CCC
Q 005798 549 TRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR---------FCD 617 (676)
Q Consensus 549 ~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~--~G~v~iN~~~~---------~~~ 617 (676)
+.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|+||||+... ..+
T Consensus 391 ~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~ 470 (513)
T cd07128 391 TAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLP 470 (513)
T ss_pred chHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCC
Confidence 6889999999999999999999999999999999999999999999999999997 99999998641 235
Q ss_pred CCcccCccccccccccccc-ccccchhcceeEEEEEE
Q 005798 618 GARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILR 653 (676)
Q Consensus 618 ~~pfG~g~~~G~~~~~~~~-~g~~g~~~ft~~k~v~~ 653 (676)
.+||||.+.||+|+ + +|.+|+++|++.|+|.-
T Consensus 471 ~~pfGG~k~SG~G~----~~gg~~~l~~~~~~k~v~~ 503 (513)
T cd07128 471 QLVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQG 503 (513)
T ss_pred CCCCCCcccCCCCc----ccccHHHHHHhheeeeeeC
Confidence 68999999998863 3 36899999999999753
No 108
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=2.5e-68 Score=584.47 Aligned_cols=381 Identities=15% Similarity=0.170 Sum_probs=297.4
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH--H
Q 005798 254 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK--S 331 (676)
Q Consensus 254 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~ 331 (676)
+++++++|++||+.|+++|+++|.++|++++++|++|+++|+++++.|+|++.. ++.. ++...+. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~----ea~~--------~~~~~~~~~~ 68 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRV----EDKV--------IKNHFAAEYI 68 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChH----HHHH--------HHHHHHHHHH
Confidence 368999999999999999999999999999999999999999998877765431 2211 1222222 1
Q ss_pred HHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005798 332 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 409 (676)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 409 (676)
.++++.. ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|||++||+||+||||+||+++.++++
T Consensus 69 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 143 (439)
T cd07081 69 YNVYKDE--KTCGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143 (439)
T ss_pred HHHHhcc--ccCceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHH
Confidence 2333321 11222111 1123457889999999999999 585 678999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHHH
Q 005798 410 VITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 487 (676)
Q Consensus 410 l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A 487 (676)
++.+++.++ +|+|+||+|++ +.++++.|..||+|++|+||||+++.+..++ ..||+++|||||||+||++|||+|.|
T Consensus 144 l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~A 222 (439)
T cd07081 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRA 222 (439)
T ss_pred HHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHH
Confidence 999988889 99999999996 5567888889999999999999997665533 36899999999999999999999999
Q ss_pred HHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHh-------------------cCcEEecCcc-----ccc
Q 005798 488 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-------------------EGVGLFGGPR-----ASK 542 (676)
Q Consensus 488 ~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-------------------~~~~~~g~~~-----~~~ 542 (676)
++.+++|+|.|+| +|++.+|+|||++|| |+|+++|++++.- .|..+.|+.. ..+
T Consensus 223 a~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G 301 (439)
T cd07081 223 VQSIVKSKTFDNGVICASEQSVIVVDSVY-DEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAG 301 (439)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEcHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcC
Confidence 9999999999987 999999999999999 7999999886411 1333444321 012
Q ss_pred -cc-c----------C-CCCCcccccccCceEEEEEeCCHHHHHHHHHcc----CCCceeEEEecC---HHHHHHHHhcc
Q 005798 543 -LL-Q----------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAED---QKVAETFLCQV 602 (676)
Q Consensus 543 -~~-p----------v-~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~----~~GL~a~vft~d---~~~a~~~~~~l 602 (676)
++ | + ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++
T Consensus 302 ~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l 381 (439)
T cd07081 302 LKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAM 381 (439)
T ss_pred CccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhC
Confidence 12 2 1 468999999999999999999999999999976 799999999999 99999999999
Q ss_pred CeeeEEEcCCCCCC---CCCcccCccccccccccccc---ccccchhcceeEEEEEE
Q 005798 603 DSAAVFHNASTRFC---DGARFGLGAEVGISTSRIHA---RGPVGVEGLLTTRWILR 653 (676)
Q Consensus 603 ~~G~v~iN~~~~~~---~~~pfG~g~~~G~~~~~~~~---~g~~g~~~ft~~k~v~~ 653 (676)
++|+|+||.++... ...-||+...+-+|++.... .-..+.++|+++|++.+
T Consensus 382 ~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 382 KTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 99999999776321 11224333322222111001 12246789999998865
No 109
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=6.3e-68 Score=627.80 Aligned_cols=428 Identities=18% Similarity=0.173 Sum_probs=351.3
Q ss_pred HHHHHHHHHHHHcCC-c-EEEEeCC-CcchHHHHHhCC-ceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHH
Q 005798 201 TAKVNAAYCAACAGI-P-VVITSGF-AMDSIIKVLEGK-RVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDR 276 (676)
Q Consensus 201 ~~K~~aa~~a~~~gv-~-v~I~~g~-~~~~i~~~~tg~-~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R 276 (676)
..++.+++...+... . -.|++|. ....+.+|.+++ .+|++..++ .+++++++++|++||+.|+.+|.++|
T Consensus 536 ~~~~~~al~~~~~~~~~~~~~i~g~~~~~~v~nP~~~~~~vg~v~~a~------~~~v~~Ai~aA~~A~~~W~~~~~~~R 609 (1038)
T PRK11904 536 LEPLAAAIAAFLEKQWQAGPIINGEGEARPVVSPADRRRVVGEVAFAD------AEQVEQALAAARAAFPAWSRTPVEER 609 (1038)
T ss_pred HHHHHHHHHHHHhcCceecceEcCCCCeEEEECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 455666666555432 1 2233652 112346778877 789988888 88999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCc
Q 005798 277 RKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGL 355 (676)
Q Consensus 277 ~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 355 (676)
.++|++++++|++++++|+.++.+|.||+. .++ ..|+..+++.+++++...+. .+..... ..+.+.
T Consensus 610 a~iL~kaAdll~~~~~eL~~l~~~E~GK~~----~~a--------~~EV~eaid~lr~ya~~a~~~~~~~~~l-~g~~ge 676 (1038)
T PRK11904 610 AAILERAADLLEANRAELIALCVREAGKTL----QDA--------IAEVREAVDFCRYYAAQARRLFGAPEKL-PGPTGE 676 (1038)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhhCCCccc-CCCCCc
Confidence 999999999999999999999887665432 122 24678888888888765432 1221110 012244
Q ss_pred EEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CC
Q 005798 356 ILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE 431 (676)
Q Consensus 356 ~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~ 431 (676)
..+..++|+|||++|+|| ||. +.++++++||++||+||+|||++||+++..+.+++++ + +|+|++|+|+| ++
T Consensus 677 ~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e----AGlP~gvl~lv~G~g~ 752 (1038)
T PRK11904 677 SNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE----AGIPKDVLQLLPGDGA 752 (1038)
T ss_pred eeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH----hCcCcceEEEeeCCch
Confidence 567889999999999999 585 5679999999999999999999999999999999986 7 99999999996 56
Q ss_pred hhhhhhcCCCCccEEEeecCHHHHHHHHHhc------CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccc
Q 005798 432 EIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNA 504 (676)
Q Consensus 432 ~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a------~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a 504 (676)
++++.|..||+|++|+||||+++|+.|++.+ .+|+++|+|||||+||++|||+|+|++.+++|+|.|+| .|+|
T Consensus 753 ~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA 832 (1038)
T PRK11904 753 TVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSA 832 (1038)
T ss_pred HHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCcccc
Confidence 6889999999999999999999999998764 26999999999999999999999999999999999987 9999
Q ss_pred cceEEEeCccCChhHHHHHHHHHHhcCc---------------------------------E-EecCccc----cccc--
Q 005798 505 METLLVHKDLACNGALNELVVELQHEGV---------------------------------G-LFGGPRA----SKLL-- 544 (676)
Q Consensus 505 ~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------------------------------~-~~g~~~~----~~~~-- 544 (676)
++|+|||++|| |+|+++|+++++++.+ + ++|+... .++|
T Consensus 833 ~~rl~V~~si~-d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~ 911 (1038)
T PRK11904 833 LRVLFVQEDIA-DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFVA 911 (1038)
T ss_pred CcEEEEeHHHH-HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEEe
Confidence 99999999999 7999999999987632 1 1233221 1333
Q ss_pred c-C---CCCCcccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC--
Q 005798 545 Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-- 616 (676)
Q Consensus 545 p-v---~~~~~~~eE~FGPVl~i~~~~--~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-- 616 (676)
| | +++.+++||+||||++|++|+ |+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.....
T Consensus 912 PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~v 991 (1038)
T PRK11904 912 PTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVV 991 (1038)
T ss_pred eEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCC
Confidence 5 3 457789999999999999997 7999999999999999999999999999999999999999999875542
Q ss_pred CCCcccCcccccccccccccccccchhcceeEEEEEEcC
Q 005798 617 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 617 ~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 655 (676)
...||||.+.||.|. +.+|++++++|++.|+|.++.
T Consensus 992 g~qPFGG~~~SG~G~---kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 992 GVQPFGGQGLSGTGP---KAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred CCCCCCCCCCCCCCC---ccchHHHHHHHhceEEEEEcc
Confidence 346999999998762 246899999999999998864
No 110
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=4.3e-68 Score=594.97 Aligned_cols=395 Identities=16% Similarity=0.167 Sum_probs=321.5
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-RRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.++.+|+.++++.. . .+++++++++|++|| +.|+++|..+|.++|++++++|++++++|+++++.|.||+.
T Consensus 24 ~nP~tge~l~~v~~-~------~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~- 95 (521)
T PRK11903 24 FDPVTGEELVRVSA-T------GLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTR- 95 (521)
T ss_pred ECCCCCCEEEEecC-C------hHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-
Confidence 45678888888764 5 679999999999995 99999999999999999999999999999998876654432
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccc------cCCCcEEEEEeec-eeEEEEEcCC-Chh-h
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTE------LADGLILEKTSCP-LGVLLIVFES-RPD-A 377 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~P-lGVV~~I~p~-~P~-~ 377 (676)
.++ ..|+..+++.+++++...+.. +....... .......++.++| +|||++|+|| ||. +
T Consensus 96 ---~~a--------~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~ 164 (521)
T PRK11903 96 ---NDS--------AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWG 164 (521)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHH
Confidence 111 246778888888877643322 11110000 0011223567899 6999999999 485 5
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHH
Q 005798 378 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 455 (676)
Q Consensus 378 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g 455 (676)
..++++|||++||+||+|||+.||+++..+++++.++ . ||+|+||+|+| ++++++.| +++|+|+||||+++|
T Consensus 165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---g~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G 238 (521)
T PRK11903 165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAA---GILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETA 238 (521)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHh---CCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHH
Confidence 6789999999999999999999999999999999873 4 89999999996 44555444 689999999999999
Q ss_pred HHHHHhc-----CCCEEeecCCcceEEEcCCCC-----HHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHH
Q 005798 456 SQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELV 524 (676)
Q Consensus 456 ~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~ 524 (676)
+.|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| +|++++|+|||+++| |+|+++|+
T Consensus 239 ~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~ 317 (521)
T PRK11903 239 AVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALY-DAVAEALA 317 (521)
T ss_pred HHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHH-HHHHHHHH
Confidence 9999853 389999999999999999999 59999999999999988 999999999999999 79999999
Q ss_pred HHHHhcCc---------------------------------EE-ecCccc--------cc-cc-c-C-----C--CCCcc
Q 005798 525 VELQHEGV---------------------------------GL-FGGPRA--------SK-LL-Q-I-----P--ETRLF 552 (676)
Q Consensus 525 ~~~~~~~~---------------------------------~~-~g~~~~--------~~-~~-p-v-----~--~~~~~ 552 (676)
++++++.+ ++ +|+... .+ ++ | | + ++.++
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~ 397 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVH 397 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHH
Confidence 99887632 12 244321 13 33 5 2 2 25788
Q ss_pred cccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhcc--CeeeEEEcCCCC---------CCCCCcc
Q 005798 553 HHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTR---------FCDGARF 621 (676)
Q Consensus 553 ~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l--~~G~v~iN~~~~---------~~~~~pf 621 (676)
+||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++ ++|+|+||+++. ..+.+||
T Consensus 398 ~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~Pf 477 (521)
T PRK11903 398 DVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLH 477 (521)
T ss_pred hCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 999999997542 2346899
Q ss_pred cCccccccccccccc-ccccchhcceeEEEEEE
Q 005798 622 GLGAEVGISTSRIHA-RGPVGVEGLLTTRWILR 653 (676)
Q Consensus 622 G~g~~~G~~~~~~~~-~g~~g~~~ft~~k~v~~ 653 (676)
||.|.||+|+ + +|.+++++||+.|++..
T Consensus 478 GG~k~SG~Gr----~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 478 GGPGRAGGGE----ELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCcCcCCc----ccccHHHHHHHhccceeeC
Confidence 9999999863 3 35789999999887654
No 111
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=3.3e-68 Score=580.81 Aligned_cols=353 Identities=19% Similarity=0.199 Sum_probs=298.6
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhcccccc-cccccccccCCCcEEE
Q 005798 280 LLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILE 358 (676)
Q Consensus 280 L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 358 (676)
|++++++|++|+++|+++++.|++|+.. ++ ..|+..+++.+++++.+.+.. +...+. ...+...+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea--------~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~ 66 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQ----LA--------EVEVAFTADYIDYMAEWARRYEGEIIQS--DRPGENIL 66 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHH----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccCC--CCCCceeE
Confidence 5789999999999999999877655421 22 236677777777776654322 222211 11234567
Q ss_pred EEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhh
Q 005798 359 KTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIP 434 (676)
Q Consensus 359 ~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~ 434 (676)
++++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|.|+..+++++.+ + ||+|+||+|+| +.+++
T Consensus 67 ~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~ 142 (409)
T PRK10090 67 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPKGVFNLVLGRGETVG 142 (409)
T ss_pred EEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----cCCCcccEEEEeCCChhHH
Confidence 889999999999999 585 5689999999999999999999999999999999986 7 99999999996 66778
Q ss_pred hhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEE
Q 005798 435 DLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLV 510 (676)
Q Consensus 435 ~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V 510 (676)
+.|..||+||+|+||||+++|+.|++.+ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+||
T Consensus 143 ~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V 222 (409)
T PRK10090 143 QELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYV 222 (409)
T ss_pred HHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEE
Confidence 8889999999999999999999999877 38999999999999999999999999999999999987 9999999999
Q ss_pred eCccCChhHHHHHHHHHHhcCc-----------------------------------EE-ecCccc--cc-cc-c-C---
Q 005798 511 HKDLACNGALNELVVELQHEGV-----------------------------------GL-FGGPRA--SK-LL-Q-I--- 546 (676)
Q Consensus 511 ~~~i~d~~f~~~l~~~~~~~~~-----------------------------------~~-~g~~~~--~~-~~-p-v--- 546 (676)
|+++| |+|+++|+++++++.. ++ +|+.+. .+ ++ | |
T Consensus 223 ~~~i~-~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~ 301 (409)
T PRK10090 223 QKGIY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLD 301 (409)
T ss_pred cHHHH-HHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeC
Confidence 99999 7999999999987621 11 133221 12 33 5 2
Q ss_pred --CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCc
Q 005798 547 --PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLG 624 (676)
Q Consensus 547 --~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g 624 (676)
+++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+........||||.
T Consensus 302 v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~ 381 (409)
T PRK10090 302 VRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGW 381 (409)
T ss_pred CCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCc
Confidence 368999999999999999999999999999999999999999999999999999999999999998766666799999
Q ss_pred ccccccccccccccccchhcceeEEEEEEcC
Q 005798 625 AEVGISTSRIHARGPVGVEGLLTTRWILRGN 655 (676)
Q Consensus 625 ~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 655 (676)
|+||+| +++|.+|+++||+.|++++.+
T Consensus 382 k~SG~G----~~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 382 RKSGIG----GADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred ccccCC----ccchHHHHHHhcceEEEEEec
Confidence 999986 357999999999999998754
No 112
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=9.9e-68 Score=583.04 Aligned_cols=376 Identities=19% Similarity=0.210 Sum_probs=308.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHH
Q 005798 256 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 335 (676)
Q Consensus 256 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (676)
+++++|++||+.|+.+|..+|.++|++++++|++|+++|+++++.|++++.. ++.. .|+...++.++++
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea~~-------~ev~~~~~~~~~~ 70 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAA----EVDL-------TEILPVLSEINHA 70 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHH-------HHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999887765432 2211 1333444444433
Q ss_pred hcccc-ccc-ccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005798 336 ADMEE-PIG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 411 (676)
Q Consensus 336 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~ 411 (676)
+.... ..+ ..........+...++.|+|+|||++|+|| +|. ..+++++|||++||+||+|||+.+|.++..+++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~ 150 (433)
T cd07134 71 IKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKII 150 (433)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 32111 001 101000001233467889999999999999 585 56799999999999999999999999999999999
Q ss_pred HHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCCCCHHHHH
Q 005798 412 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAK 488 (676)
Q Consensus 412 ~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~A~ 488 (676)
.+ ++|+|++|++++..+.+..|.+|| +++|+||||+.+|+.|++.+. +|+++|||||||+||++|||++.|+
T Consensus 151 ~~----a~p~g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa 225 (433)
T cd07134 151 RE----AFDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAA 225 (433)
T ss_pred HH----hCCcCEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHH
Confidence 86 499999999997555677777787 999999999999999998763 8999999999999999999999999
Q ss_pred HHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc-----------------------------------
Q 005798 489 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------------- 532 (676)
Q Consensus 489 ~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----------------------------------- 532 (676)
+.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++..
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga 304 (433)
T cd07134 226 KKIAWGKFLNAGQTCIAPDYVFVHESVK-DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGA 304 (433)
T ss_pred HHHHHHhhcCcCCcccCCcEEEECHHHH-HHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCC
Confidence 999999999987 999999999999999 7999999998886411
Q ss_pred EE-ecCccc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhcc
Q 005798 533 GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 602 (676)
Q Consensus 533 ~~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l 602 (676)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++
T Consensus 305 ~~~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 384 (433)
T cd07134 305 KVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLART 384 (433)
T ss_pred EEEeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhC
Confidence 11 122111 12 22 5 2 36789999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 603 DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 603 ~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
++|.|+||+.+.. .+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 385 ~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 385 SSGGVVVNDVVLHFLNPNLPFGGVNNSGIG----SYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CcceEEECCcccccCCCCCCCCCcCcccCC----CcCcHHHHHHhcccceee
Confidence 9999999987543 367899999999986 356999999999999875
No 113
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=1.1e-67 Score=582.16 Aligned_cols=376 Identities=22% Similarity=0.245 Sum_probs=309.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHH
Q 005798 256 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 335 (676)
Q Consensus 256 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (676)
+++++|++||+.|+.+|..+|.++|++++++|++++++|+++++.|++++.. ++.. .|+...++.++++
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----~~~~-------~Ev~~~~~~~~~~ 70 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPA----EAYL-------TEIAVVLGEIDHA 70 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHH-------HHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999998877655421 1211 2444444444444
Q ss_pred hccccc-cc-ccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005798 336 ADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 411 (676)
Q Consensus 336 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~ 411 (676)
+...+. .+ ..........+...+.+++|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|.++.++++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~ 150 (426)
T cd07087 71 LKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLI 150 (426)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 332111 01 100000001123457789999999999998 586 67899999999999999999999999999999999
Q ss_pred HHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcCCCCHHHHH
Q 005798 412 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAK 488 (676)
Q Consensus 412 ~~al~~alP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~ 488 (676)
.+ .+|+|++|+|+|..+.+..|.+|| +|+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.|+
T Consensus 151 ~~----~~P~gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa 225 (426)
T cd07087 151 PK----YFDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAA 225 (426)
T ss_pred HH----hCCCCEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHH
Confidence 85 499999999996545567777788 99999999999999999877 48999999999999999999999999
Q ss_pred HHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----------------------------E-EecCc
Q 005798 489 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGP 538 (676)
Q Consensus 489 ~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----------------------------~-~~g~~ 538 (676)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.. + ++|+.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~ 304 (426)
T cd07087 226 RRIAWGKFLNAGQTCIAPDYVLVHESIK-DELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQ 304 (426)
T ss_pred HHHHHHHHhccCCccccCCEEEEcHHHH-HHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCc
Confidence 999999999987 999999999999999 7999999999876521 0 12332
Q ss_pred cc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEE
Q 005798 539 RA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 609 (676)
Q Consensus 539 ~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~i 609 (676)
.. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+|
T Consensus 305 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~i 384 (426)
T cd07087 305 VDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCV 384 (426)
T ss_pred cCCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEE
Confidence 21 12 33 5 2 368899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC--CCCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 610 NASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 610 N~~~~--~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
|++.. ..+..||||.|.||+| +++|.+|+++||+.|+++
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 385 NDVLLHAAIPNLPFGGVGNSGMG----AYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCcccccCCCCCCCCCCCcccCC----CccCHHHHHHhccceeec
Confidence 98753 2367899999999886 356999999999999874
No 114
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=3.3e-67 Score=583.48 Aligned_cols=381 Identities=19% Similarity=0.244 Sum_probs=312.5
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.++ +... +++. +......
T Consensus 7 ~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk------~~~~-~~~~----~~~~~~~ 75 (488)
T TIGR02518 7 IQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGF------GKWE-DKVI----KNVFAAT 75 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCC------ChHH-HHHH----HHHHHHH
Confidence 668999999999999999999999999999999999999999999977665543 3211 1111 1112333
Q ss_pred HHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005798 331 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 408 (676)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 408 (676)
.+.+++...+..|.... +.+...+.+++|+|||++|+|| ||. +..+++++||++||+||+|||+.||.|+..++
T Consensus 76 ~~~~~~~~~~~~G~~~~----~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~ 151 (488)
T TIGR02518 76 IVYDSIKDMKTIGILSE----DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETV 151 (488)
T ss_pred HHHHHHhhCcccceecC----CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHH
Confidence 33333332233342211 2344567889999999999999 696 45788999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHH
Q 005798 409 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 486 (676)
Q Consensus 409 ~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~ 486 (676)
+++++++.++ +|+|+||+|++ +.+.++.|..||+||+|+||||+.+++.+ ..+.+|+++|+|||||+||++|||+|+
T Consensus 152 ~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a-~~~~~pv~~e~gGn~p~iV~~dADld~ 230 (488)
T TIGR02518 152 KLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA-YSSGTPAIGVGPGNGPAYIERTANVKK 230 (488)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH-HHcCCCEEEEcCCCCeEEEeCCCCHHH
Confidence 9999999899 99999999995 55667777788999999999999999888 456899999999999999999999999
Q ss_pred HHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHH-------HHhcCcEEecCc----------ccc-------
Q 005798 487 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE-------LQHEGVGLFGGP----------RAS------- 541 (676)
Q Consensus 487 A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~-------~~~~~~~~~g~~----------~~~------- 541 (676)
|++.+++|+|+|+| .|+|.+|+|||++|| |+|+++|+++ .+++.+ |++ ...
T Consensus 231 Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~-d~f~~~L~~~g~~~~~~~~~~~v---g~~~~~~~~~~gp~i~~~~~~~i 306 (488)
T TIGR02518 231 AVRDIIDSKTFDNGTICASEQSIIVEECNK-DAVVEELKKQGGYFLTAEEAEKL---GKFILRPNGTMNPQIVGKSPQVI 306 (488)
T ss_pred HHHHHHHHHhcCCCCCCCCCCEEEEeHHHH-HHHHHHHHHhhhhhcCHHHHHhh---cccccCCCCCcCcccccchHHHH
Confidence 99999999999877 999999999999999 7999999887 555432 211 000
Q ss_pred -ccc----c------------C-CCCCcccccccCceEEEEEeCCHHHHHHHHHc----cCCCceeEEEecCHHHHHHHH
Q 005798 542 -KLL----Q------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFL 599 (676)
Q Consensus 542 -~~~----p------------v-~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~----~~~GL~a~vft~d~~~a~~~~ 599 (676)
.++ + + ++++ ++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|+
T Consensus 307 ~~~i~~av~~gakll~gg~~~v~~~~~-~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~ 385 (488)
T TIGR02518 307 ANLAGLTVPEDAKVLIGEQNGVGNKNP-YSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFA 385 (488)
T ss_pred HHHhccccCCCCEEEEeCCCCCCCCCc-cccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHH
Confidence 000 1 1 1344 589999999999999999999999998 699999999999999999999
Q ss_pred hccCeeeEEEcC---------CCCCCCCCcccCcccccccccccccccccchhcceeEEEEEEcCce
Q 005798 600 CQVDSAAVFHNA---------STRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 657 (676)
Q Consensus 600 ~~l~~G~v~iN~---------~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~~ 657 (676)
+++++|+|+||+ ++.+.+++.||+|.+.|+|++ .+.|+++|++.|+|.++...
T Consensus 386 ~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~~~ 447 (488)
T TIGR02518 386 LKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGVRE 447 (488)
T ss_pred HhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecccc
Confidence 999999999994 345667778999999888864 38899999999999998743
No 115
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.5e-67 Score=606.86 Aligned_cols=395 Identities=18% Similarity=0.207 Sum_probs=320.0
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 307 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 307 (676)
.++.+|+.++++...+ . |+++|+++|++| |+.|+++|..+|+++|++++++|++|+++|++ ++.|++|+.
T Consensus 24 ~nP~tg~~i~~~~~~~------~-dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~- 94 (675)
T PRK11563 24 HDAVTGEPVARVSSEG------L-DFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATR- 94 (675)
T ss_pred cCCCCCCEEEEEcCCc------H-HHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCH-
Confidence 4577888888876544 3 899999999998 79999999999999999999999999999998 455544331
Q ss_pred hchhHHHHHHhhcChHHHHHHHHHHHHHhccccc---------ccccccccccCCCcEEEEEeece-eEEEEEcCCC-hh
Q 005798 308 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFESR-PD 376 (676)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~~-P~ 376 (676)
.++ ..|+...++.+++++...+. .|+..+.. .......+..++|+ |||++|+||| |.
T Consensus 95 ---~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~GVv~~I~PwNfP~ 162 (675)
T PRK11563 95 ---RDS--------WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS-KGGTFAGRHILTPLEGVAVHINAFNFPV 162 (675)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHhhhccccccccCCcccccc-CCCcccceEEEeecCceEEEECCCchHH
Confidence 121 23566677777777654321 12222110 01112246778997 9999999994 85
Q ss_pred -hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHH
Q 005798 377 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKL 454 (676)
Q Consensus 377 -~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~ 454 (676)
+.+++++|||++||+||+||||.||+++..+++++.++ . +|+|+||+|+|. .++++..++++++|+||||+++
T Consensus 163 ~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~ea---G~~P~gv~~vv~g~--~~~~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 163 WGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVES---GLLPEGALQLICGS--AGDLLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHc---CCCCCCcEEEeeCC--HHHHhhcCCCCCEEEEECcHHH
Confidence 67899999999999999999999999999999999873 4 899999999963 2334555568999999999999
Q ss_pred HHHHHHhc-----CCCEEeecCCcceEEEcCCCC-----HHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHH
Q 005798 455 VSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNEL 523 (676)
Q Consensus 455 g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l 523 (676)
|+.|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l 316 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALV-DAVIEAL 316 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHH-HHHHHHH
Confidence 99999842 399999999999999999995 99999999999999987 999999999999999 7999999
Q ss_pred HHHHHhcCc---------------------------------E-EecCcc---------ccc-cc-c-C-----C--CCC
Q 005798 524 VVELQHEGV---------------------------------G-LFGGPR---------ASK-LL-Q-I-----P--ETR 550 (676)
Q Consensus 524 ~~~~~~~~~---------------------------------~-~~g~~~---------~~~-~~-p-v-----~--~~~ 550 (676)
+++++++.+ + ++|+.. ..+ |+ | | + .+.
T Consensus 317 ~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~ 396 (675)
T PRK11563 317 RARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA 396 (675)
T ss_pred HHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence 999987632 1 235431 123 33 6 2 3 257
Q ss_pred cccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccC--eeeEEEcCCCC--------C-CCCC
Q 005798 551 LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR--------F-CDGA 619 (676)
Q Consensus 551 ~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~--~G~v~iN~~~~--------~-~~~~ 619 (676)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++ +|.||||+.+. . .+.+
T Consensus 397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~ 476 (675)
T PRK11563 397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQL 476 (675)
T ss_pred HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCC
Confidence 89999999999999999999999999999999999999999999999999997 99999997521 1 2567
Q ss_pred cccCccccccccccccc-ccccchhcceeEEEEEEc
Q 005798 620 RFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 620 pfG~g~~~G~~~~~~~~-~g~~g~~~ft~~k~v~~~ 654 (676)
||||.|.||+|+ + +|.+|+++|++.|+|...
T Consensus 477 pfGG~k~SG~G~----~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 477 VHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CcCCCCCCCCCc----cccchhHHHHhheeeeeecC
Confidence 999999998863 3 368999999999998654
No 116
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=4.7e-67 Score=580.96 Aligned_cols=380 Identities=16% Similarity=0.169 Sum_probs=311.6
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHH
Q 005798 254 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 333 (676)
Q Consensus 254 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 333 (676)
+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~----~~--------~~ev~~~~~~l~ 68 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEA----RL--------QGELGRTTGQLR 68 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH----HH--------HHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999998766544321 11 124555666666
Q ss_pred HHhcccc---cccccccccc----cCCCcEEEEEeeceeEEEEEcCC-Chh-h--HHHHHHHHHHhCCEEEEeCCcchHH
Q 005798 334 ILADMEE---PIGQILKRTE----LADGLILEKTSCPLGVLLIVFES-RPD-A--LVQIASLAIRSGNGLLLKGGKEAMR 402 (676)
Q Consensus 334 ~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~PlGVV~~I~p~-~P~-~--~~~~~~~ALaaGN~vVlKps~~tp~ 402 (676)
+++...+ ..+....... ...+...+.+++|+|||++|+|| +|. + .++++++||++||+||+|||+.+|.
T Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~ 148 (454)
T cd07129 69 LFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPG 148 (454)
T ss_pred HHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCch
Confidence 5554321 1121111000 00122346789999999999999 585 3 3489999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc-----CCCEEeecCCcce
Q 005798 403 SNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-----KIPVLGHADGICH 475 (676)
Q Consensus 403 t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-----~~~~~lElGGk~p 475 (676)
++.++++++.+++.++ +|+|+||+|+| +.++++.|..||+||+|+||||+.+|+.|++++ .+|+++|||||||
T Consensus 149 t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~ 228 (454)
T cd07129 149 TSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228 (454)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCc
Confidence 9999999999888889 99999999996 546778888899999999999999999998865 3799999999999
Q ss_pred EEEcCCC---CHHHHHHHHHHhcCCCCc-cccccceEEEeCc-cCChhHHHHHHHHHHhcC-------------------
Q 005798 476 VYVDKSA---NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEG------------------- 531 (676)
Q Consensus 476 ~iV~~dA---Dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~------------------- 531 (676)
+||++|| |+|.|++.+++|+|.|+| .|+|++|+|||++ +| |+|+++|+++++++.
T Consensus 229 ~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAG-DAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccH-HHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHH
Confidence 9999999 899999999999999987 9999999999999 99 799999999887653
Q ss_pred ------cEEe-cCccc-cc-cc-c-C----C----CCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecC-
Q 005798 532 ------VGLF-GGPRA-SK-LL-Q-I----P----ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAED- 591 (676)
Q Consensus 532 ------~~~~-g~~~~-~~-~~-p-v----~----~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d- 591 (676)
.+++ |+... .+ ++ | | + ++++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 308 a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~ 387 (454)
T cd07129 308 LAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEED 387 (454)
T ss_pred HHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCc
Confidence 2232 44331 12 33 5 2 2 47899999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHhcc--CeeeEEEcCCCCCC---CCCcccC-cccccccccccccccccchhcceeE
Q 005798 592 -QKVAETFLCQV--DSAAVFHNASTRFC---DGARFGL-GAEVGISTSRIHARGPVGVEGLLTT 648 (676)
Q Consensus 592 -~~~a~~~~~~l--~~G~v~iN~~~~~~---~~~pfG~-g~~~G~~~~~~~~~g~~g~~~ft~~ 648 (676)
.++++++++++ ++|+|+||+++... +..|||| .+.||+|+ ....|++++++||++
T Consensus 388 ~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~--~~~~g~~~~~~~~~~ 449 (454)
T cd07129 388 DLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPR--FTSVGTAAIERFLRP 449 (454)
T ss_pred hHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCc--cccccHHHHHHhccc
Confidence 89999999999 69999999765432 3789999 88888763 212489999999987
No 117
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=2.9e-66 Score=566.30 Aligned_cols=382 Identities=21% Similarity=0.239 Sum_probs=320.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhcc
Q 005798 259 VAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADM 338 (676)
Q Consensus 259 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (676)
++|++||+.|+++|.++|.++|++++++|++++++|++++..|++++... ..+...+++.....++..+++.+++++..
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~-~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRS-LIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999999876432 22233445555566899999999988754
Q ss_pred cccc-cccccccccCCCcEEEEEeeceeEEEEEcCCC-hhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 005798 339 EEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 416 (676)
Q Consensus 339 ~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~ 416 (676)
.... +...+ .+...+++++|+|||++|+||| |...++++++||++||+||+|||+.+|.++..+++++.+++.
T Consensus 80 ~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~ 154 (397)
T cd07077 80 VGHIQDVLLP-----DNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA 154 (397)
T ss_pred cCcccceEec-----CCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhh
Confidence 3222 22111 1234678999999999999995 755789999999999999999999999999999999998764
Q ss_pred cccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEeecCCcceEEEcCCCCHHHHHHHHHHh
Q 005798 417 DTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDA 494 (676)
Q Consensus 417 ~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~ 494 (676)
..+|++++|+|++ +.+.+..|..||+||+|+||||+++|+.+++.+. +|+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 ~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 155 AHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred cCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 3399999999985 5567777888999999999999999999998875 9999999999999999999999999999999
Q ss_pred cCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccc-cCCCCCcccccccCceEEEEEeCCHH---
Q 005798 495 KIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-QIPETRLFHHEYNSMVCTVEIVDDVR--- 570 (676)
Q Consensus 495 ~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~-pv~~~~~~~eE~FGPVl~i~~~~~~d--- 570 (676)
+|.|+|.|+|++|+|||+++| |+|+++|++++++.|.++..+... .++ |.+++++++||+||||++|++|+|+|
T Consensus 235 ~~~~GQ~C~a~~~v~V~~~i~-d~~~~~l~~~~~~~G~~~~~g~~~-~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~eai 312 (397)
T cd07077 235 KFFDQNACASEQNLYVVDDVL-DPLYEEFKLKLVVEGLKVPQETKP-LSKETTPSFDDEALESMTPLECQFRVLDVISAV 312 (397)
T ss_pred hccCCccCCCCeEEEEehhhh-HHHHHHHHHHHHhcCcCcCCCcee-eEEeccCCCChhhhhhhCceeEEEEEcchHHHH
Confidence 999944999999999999999 799999999998866655422111 122 23478899999999999999999996
Q ss_pred -HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC--CCCcccCcc--ccccccccccccc-ccchhc
Q 005798 571 -AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGA--EVGISTSRIHARG-PVGVEG 644 (676)
Q Consensus 571 -eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~--~~G~~~~~~~~~g-~~g~~~ 644 (676)
+|++++|+++|||++||||+|.+++.++++++++|+|+||+++... ..+|||+.+ .||.+ +++| .+|+++
T Consensus 313 ~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g----~~~g~~~~~~~ 388 (397)
T cd07077 313 ENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMN----NIFGAGVGHDA 388 (397)
T ss_pred HHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEcccc----CCCCCCCChHH
Confidence 5666789999999999999999999999999999999999987665 334555545 56664 4568 999999
Q ss_pred ceeEEEEE
Q 005798 645 LLTTRWIL 652 (676)
Q Consensus 645 ft~~k~v~ 652 (676)
|++.|++.
T Consensus 389 ~~~~k~v~ 396 (397)
T cd07077 389 LRPLKRLV 396 (397)
T ss_pred hcceeEee
Confidence 99999975
No 118
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=1.1e-66 Score=570.20 Aligned_cols=376 Identities=20% Similarity=0.258 Sum_probs=299.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH-HH
Q 005798 254 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK-SI 332 (676)
Q Consensus 254 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 332 (676)
+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++. .++. ..++...+. .+
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~----~ea~-------~~e~~~~~~~~~ 69 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGV----VEDK-------VIKNHFASEYVY 69 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----HHHH-------HHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999877665432 1211 124555555 56
Q ss_pred HHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005798 333 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 410 (676)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l 410 (676)
++++.. +..+.... ..+...+++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+..++++
T Consensus 70 ~~~~~~-~~~g~~~~----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 144 (436)
T cd07122 70 NDIKDM-KTVGVIEE----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKI 144 (436)
T ss_pred HHHhcC-cceeeecc----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHH
Confidence 666542 22222111 1234567889999999999999 596 5679999999999999999999999999999999
Q ss_pred HHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHHHH
Q 005798 411 ITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 488 (676)
Q Consensus 411 ~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~ 488 (676)
+.++|.++ +|+|+||+|++ ++++++.|..||+||+|+||||+++++..+ ...+|+++|||||||+||++|||+|+|+
T Consensus 145 ~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~ 223 (436)
T cd07122 145 MREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAY-SSGKPAIGVGPGNVPAYIDETADIKRAV 223 (436)
T ss_pred HHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHH-hcCCCEEEecCCCCeEEEcCCCCHHHHH
Confidence 99988889 99999999996 566788888899999999999999987653 3479999999999999999999999999
Q ss_pred HHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhc-------Cc---------EE---e-cCcc--c----c
Q 005798 489 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------GV---------GL---F-GGPR--A----S 541 (676)
Q Consensus 489 ~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-------~~---------~~---~-g~~~--~----~ 541 (676)
+.+++|+|.|+| .|++++|+|||++|| |+|+++|+++...+ .+ .+ . +... . .
T Consensus 224 ~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~ 302 (436)
T cd07122 224 KDIILSKTFDNGTICASEQSVIVDDEIY-DEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAG 302 (436)
T ss_pred HHHHHHhhccCCCCCCCCCEEEEechhH-HHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcC
Confidence 999999999987 999999999999999 79999999876542 10 00 0 1100 0 0
Q ss_pred ccc-c-----------C-CCCCcccccccCceEEEEEeCCHHHHHHHHHcc----CCCceeEEEecCHHHHHHHHhccCe
Q 005798 542 KLL-Q-----------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAEDQKVAETFLCQVDS 604 (676)
Q Consensus 542 ~~~-p-----------v-~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~----~~GL~a~vft~d~~~a~~~~~~l~~ 604 (676)
..+ | + ++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++++++++++
T Consensus 303 ~~~~~ga~vl~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~a 381 (436)
T cd07122 303 IEVPEDTKVLVAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPV 381 (436)
T ss_pred CCCCCCCeEEEEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCc
Confidence 011 1 1 356777 56799999999999999999999998 8999999999999999999999999
Q ss_pred eeEEEcCCCCCCC-----C-Ccc----cCcccccccccccccccccchhcceeEEEEEE
Q 005798 605 AAVFHNASTRFCD-----G-ARF----GLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 605 G~v~iN~~~~~~~-----~-~pf----G~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
|+||||+++.+.. + +|+ |++...|.+ ..+..+..+|+++|+|.+
T Consensus 382 G~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 382 SRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNS-----TSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred eEEEEeCCccccccCccCCCCCceeeeeccccCCCc-----CCCCCChHHhheeEeecc
Confidence 9999998875311 1 222 233222221 124467899999999875
No 119
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=3.5e-66 Score=617.29 Aligned_cols=384 Identities=18% Similarity=0.194 Sum_probs=328.7
Q ss_pred HHHHHh-CCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 228 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 228 i~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
+.+|.+ ++.+|++..++ .++|++|+++|++||+.|+.+|.++|+++|++++++|++++++|+.++.+|.||+.
T Consensus 663 v~nPa~~~~~vg~v~~a~------~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~ 736 (1318)
T PRK11809 663 VINPADPRDIVGYVREAT------PAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTF 736 (1318)
T ss_pred eECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCH
Confidence 456666 56788888888 88999999999999999999999999999999999999999999999887665432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
. ++ ..|+..+++.+++|+...+.. . ....++|+|||++|+|| ||. +.+.++++
T Consensus 737 ~----~A--------~~EV~eaidflryyA~~a~~~---~----------~~~~~~PlGVV~~IsPWNFPlai~~g~iaa 791 (1318)
T PRK11809 737 S----NA--------IAEVREAVDFLRYYAGQVRDD---F----------DNDTHRPLGPVVCISPWNFPLAIFTGQVAA 791 (1318)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHh---c----------CCceeecccEEEEECCCccHHHHHHHHHHH
Confidence 1 22 347889999999998643210 0 02358999999999999 585 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+||||+||+++..+++++++ + +|+|+||+|+| ++++++.|..||+|++|+||||+++|+.|++.+
T Consensus 792 ALaAGN~VV~KPseqTpl~a~~lv~ll~e----AGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~a 867 (1318)
T PRK11809 792 ALAAGNSVLAKPAEQTPLIAAQAVRILLE----AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNL 867 (1318)
T ss_pred HHHcCCeEEEeCCCCcHHHHHHHHHHHHH----hCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 667899999999999999999999999998864
Q ss_pred C---------CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc
Q 005798 463 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 532 (676)
Q Consensus 463 ~---------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~ 532 (676)
+ +|+++|+|||||+||++|||+|+|++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|+++++++.+
T Consensus 868 A~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Ia-d~fl~~L~~a~~~l~v 946 (1318)
T PRK11809 868 AGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVA-DRTLKMLRGAMAECRM 946 (1318)
T ss_pred hhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHH-HHHHHHHHHHHHhcCC
Confidence 2 6999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred ----------------------------------EEe-cCcc-----ccc-cc-c-C---CCCCcccccccCceEEEEEe
Q 005798 533 ----------------------------------GLF-GGPR-----ASK-LL-Q-I---PETRLFHHEYNSMVCTVEIV 566 (676)
Q Consensus 533 ----------------------------------~~~-g~~~-----~~~-~~-p-v---~~~~~~~eE~FGPVl~i~~~ 566 (676)
.++ |+.. ..+ |+ | | +++.+++||+|||||+|++|
T Consensus 947 GdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~~~ 1026 (1318)
T PRK11809 947 GNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVVRY 1026 (1318)
T ss_pred CCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEEEe
Confidence 111 1110 113 33 5 2 45778999999999999999
Q ss_pred C--CHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC--CCCcccCcccccccccccccccccch
Q 005798 567 D--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGV 642 (676)
Q Consensus 567 ~--~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~ 642 (676)
+ |+||||+++|+++|||+++|||+|.+++.++++++++|+||||+..... ...||||.+.||.|. +.+|++++
T Consensus 1027 ~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~---kaGGp~yL 1103 (1318)
T PRK11809 1027 NRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP---KAGGPLYL 1103 (1318)
T ss_pred CCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC---CCCCHHHH
Confidence 6 7999999999999999999999999999999999999999999866432 346999998888752 35799999
Q ss_pred hcceeEEE
Q 005798 643 EGLLTTRW 650 (676)
Q Consensus 643 ~~ft~~k~ 650 (676)
..|++.+.
T Consensus 1104 ~~f~~~~~ 1111 (1318)
T PRK11809 1104 YRLLATRP 1111 (1318)
T ss_pred HHHhccCC
Confidence 99999874
No 120
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=1.2e-65 Score=567.34 Aligned_cols=375 Identities=14% Similarity=0.100 Sum_probs=307.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHH
Q 005798 255 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 334 (676)
Q Consensus 255 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (676)
++++++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|+|++.+ . ..|+...+..+++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-----~--------~~ev~~~i~~~~~ 68 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWM-----F--------AENICGDQVQLRA 68 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCchh-----h--------hhhhcchHHHHHH
Confidence 57899999999999999999999999999999999999999998876654321 1 1245555555555
Q ss_pred Hhcccccc---cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005798 335 LADMEEPI---GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 409 (676)
Q Consensus 335 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 409 (676)
++...... +..........+...+.+++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.++..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~ 148 (442)
T cd07084 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVR 148 (442)
T ss_pred HHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHH
Confidence 54332211 1100000000123457889999999999999 586 567899999999999999999999999999999
Q ss_pred HHHHhcccc-c-CcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEeecCCcceEEEcCCC-CHH
Q 005798 410 VITSAIPDT-V-GEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSA-NLD 485 (676)
Q Consensus 410 l~~~al~~a-l-P~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGGk~p~iV~~dA-Dl~ 485 (676)
++.+ + + |+|++|+|++....+..|..||++|+|+||||+++|+.|++.+. +|+++|||||||+||++|| |+|
T Consensus 149 ~l~~----ag~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~ 224 (442)
T cd07084 149 LLHY----AGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVD 224 (442)
T ss_pred HHHH----hCCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHH
Confidence 9987 6 6 99999999964337788888999999999999999999999887 8999999999999999999 699
Q ss_pred HHHHHHHHhcCCCCc-cccccceEEEeCc-cCChhHHHHHHHHHHhcC--------------------------cEE-ec
Q 005798 486 VAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEG--------------------------VGL-FG 536 (676)
Q Consensus 486 ~A~~~iv~~~~~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~--------------------------~~~-~g 536 (676)
.|++.+++++|.|+| .|+|++|+|||++ +| ++|+++|+++++++. .++ +|
T Consensus 225 ~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~-~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~g 303 (442)
T cd07084 225 YVAWQCVQDMTACSGQKCTAQSMLFVPENWSK-TPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFS 303 (442)
T ss_pred HHHHHHHHHHhcccCCeecCCcEEEEeCCccH-HHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeC
Confidence 999999999999988 9999999999999 99 799999999887752 122 24
Q ss_pred Cccc--------cc-cc-c-C-----CCC---CcccccccCceEEEEEeCC--HHHHHHHHHccCCCceeEEEecCHHHH
Q 005798 537 GPRA--------SK-LL-Q-I-----PET---RLFHHEYNSMVCTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVA 595 (676)
Q Consensus 537 ~~~~--------~~-~~-p-v-----~~~---~~~~eE~FGPVl~i~~~~~--~deAi~~aN~~~~GL~a~vft~d~~~a 595 (676)
+... .+ ++ | | ++| ++++||+||||++|++|+| +||||+++|+++|||++||||+|.+++
T Consensus 304 g~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 383 (442)
T cd07084 304 GKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFL 383 (442)
T ss_pred CcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHH
Confidence 3321 12 33 5 2 344 8999999999999999999 999999999999999999999999999
Q ss_pred HHHHhcc-CeeeEEEcCC--CCCCCCCcccC-ccccccccccccc-ccccchhcceeEEEE
Q 005798 596 ETFLCQV-DSAAVFHNAS--TRFCDGARFGL-GAEVGISTSRIHA-RGPVGVEGLLTTRWI 651 (676)
Q Consensus 596 ~~~~~~l-~~G~v~iN~~--~~~~~~~pfG~-g~~~G~~~~~~~~-~g~~g~~~ft~~k~v 651 (676)
+++++++ ++|+||||+. +...+..|||| ++.||+|+ + +|.+++++||+...+
T Consensus 384 ~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~----~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 384 QELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA----GIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCc----cccchHHhhheeeeeee
Confidence 9999999 9999999976 33445567776 56888763 3 388999999987654
No 121
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=2.1e-65 Score=612.58 Aligned_cols=389 Identities=17% Similarity=0.186 Sum_probs=332.9
Q ss_pred HHHHHh-CCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 005798 228 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 306 (676)
Q Consensus 228 i~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 306 (676)
+.+|.+ ++.+|++..++ .+++++++++|++||+.|+.+|.++|+++|++++++|++++++|++++.+|.+|..
T Consensus 571 v~nP~~~~~~vg~v~~a~------~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~ 644 (1208)
T PRK11905 571 VLNPADHDDVVGTVTEAS------AEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTL 644 (1208)
T ss_pred EECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 356666 77788888888 88999999999999999999999999999999999999999999999887654432
Q ss_pred hhchhHHHHHHhhcChHHHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005798 307 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 384 (676)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 384 (676)
.++ ..|+..+++.+++|+...+... + ...++|+|||++|+|| ||. +.++++++
T Consensus 645 ----~ea--------~~Ev~eaid~lr~ya~~a~~~~----------~---~~~~~P~GVv~~IsPwNfPlai~~g~i~a 699 (1208)
T PRK11905 645 ----ANA--------IAEVREAVDFLRYYAAQARRLL----------N---GPGHKPLGPVVCISPWNFPLAIFTGQIAA 699 (1208)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhc----------C---CceecCccEEEEEcCCcCHHHHHHHHHHH
Confidence 122 3478889999999886432110 0 1347899999999999 585 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005798 385 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 462 (676)
Q Consensus 385 ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 462 (676)
||++||+||+|||++||+++..+.+++.+ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.+
T Consensus 700 ALaaGN~VV~KPse~tpl~a~~l~~ll~e----AGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~ 775 (1208)
T PRK11905 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHE----AGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTL 775 (1208)
T ss_pred HHHcCCEEEEeCCcccHHHHHHHHHHHHH----cCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 566889999999999999999999999998864
Q ss_pred ------CCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc---
Q 005798 463 ------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 532 (676)
Q Consensus 463 ------~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 532 (676)
.+|+++|+|||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 776 A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~-d~f~e~L~~~~~~l~vGdP 854 (1208)
T PRK11905 776 AKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVA-DRVLTMLKGAMDELRIGDP 854 (1208)
T ss_pred HhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHH-HHHHHHHHHHHHHhcCCCc
Confidence 27999999999999999999999999999999999987 999999999999999 7999999999987642
Q ss_pred -------------------------------EEecCcc----ccccc--c-C---CCCCcccccccCceEEEEEeC--CH
Q 005798 533 -------------------------------GLFGGPR----ASKLL--Q-I---PETRLFHHEYNSMVCTVEIVD--DV 569 (676)
Q Consensus 533 -------------------------------~~~g~~~----~~~~~--p-v---~~~~~~~eE~FGPVl~i~~~~--~~ 569 (676)
.++++.. ..++| | | +++.+++||+||||++|++|+ |+
T Consensus 855 ~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~dl 934 (1208)
T PRK11905 855 WRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADEL 934 (1208)
T ss_pred hhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCCCH
Confidence 1111110 11233 5 3 467889999999999999997 79
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCC--CCCcccCcccccccccccccccccchhccee
Q 005798 570 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLT 647 (676)
Q Consensus 570 deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~ 647 (676)
||||+++|+++|||+++|||+|.+++.++++++++|+||||+..... ...||||.+.||.|. +.+|+++++.|++
T Consensus 935 deaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~---kaGGp~~L~~f~~ 1011 (1208)
T PRK11905 935 DRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP---KAGGPLYLGRLVR 1011 (1208)
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC---cCCCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999876543 346999998888752 3579999999999
Q ss_pred EEEEEEcC
Q 005798 648 TRWILRGN 655 (676)
Q Consensus 648 ~k~v~~~~ 655 (676)
.|++++..
T Consensus 1012 ~k~v~~~~ 1019 (1208)
T PRK11905 1012 EAPTPIPP 1019 (1208)
T ss_pred cceeeccc
Confidence 99998653
No 122
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=4.2e-65 Score=568.47 Aligned_cols=365 Identities=16% Similarity=0.145 Sum_probs=293.6
Q ss_pred HHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH---
Q 005798 230 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ--- 306 (676)
Q Consensus 230 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~--- 306 (676)
+|++++.++++...+ .++++++|++||+.|+++++.+|.++|++++++|++|+++|+++++.|.|++.
T Consensus 71 ~P~t~~~~~~~~~~~---------~~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a 141 (551)
T TIGR02288 71 SPYGVELGVTYPQCD---------GDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMA 141 (551)
T ss_pred CCCCCCEEEEEcCCC---------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH
Confidence 466777777765544 38999999999999999999999999999999999999999999998876654
Q ss_pred -hhchhHHHHHHhhcChHHHHHHHHHHHHHhcccc-cccccc---ccc-ccCCCcEEEEEeeceeEEEEEcCC-Chh-hH
Q 005798 307 -EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQIL---KRT-ELADGLILEKTSCPLGVLLIVFES-RPD-AL 378 (676)
Q Consensus 307 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~-~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~ 378 (676)
++|++ .+....++.++++++... ..+... +.. ........+..++|+|||++|+|| ||. +.
T Consensus 142 ~e~gkp-----------~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~ 210 (551)
T TIGR02288 142 FQAGGP-----------HAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNT 210 (551)
T ss_pred HhccCh-----------HHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHH
Confidence 22222 122333444555443221 111111 100 000011123468999999999999 586 56
Q ss_pred HHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--CChhhhhhcCCCCccEEEeecCHHHH
Q 005798 379 VQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLV 455 (676)
Q Consensus 379 ~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~--~~~~~~~l~~~~~v~~v~fTGS~~~g 455 (676)
.+++++||++||+||+||||.||+++.++.+++.+++.++ ||+|+||+|++ +.++++.|..||+|++|+||||+++|
T Consensus 211 ~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G 290 (551)
T TIGR02288 211 YPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFG 290 (551)
T ss_pred HHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHH
Confidence 8999999999999999999999998886666666666678 99999999995 56788889999999999999999999
Q ss_pred HHHHHhcC-CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCc---------cCChhHHHHHH
Q 005798 456 SQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELV 524 (676)
Q Consensus 456 ~~i~~~a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~---------i~d~~f~~~l~ 524 (676)
+.|++.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|+
T Consensus 291 ~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~-def~~~L~ 369 (551)
T TIGR02288 291 QWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSY-DEVAADLA 369 (551)
T ss_pred HHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHH-HHHHHHHH
Confidence 99999875 8999999999999999999999999999999999987 9999999999999 79 79999999
Q ss_pred HHHHhcCc------------------------------EEecCccc-----cc--cc-c-C----C-CCCcccccccCce
Q 005798 525 VELQHEGV------------------------------GLFGGPRA-----SK--LL-Q-I----P-ETRLFHHEYNSMV 560 (676)
Q Consensus 525 ~~~~~~~~------------------------------~~~g~~~~-----~~--~~-p-v----~-~~~~~~eE~FGPV 560 (676)
++++++ + .++|+... .+ ++ | | + +|++++||+||||
T Consensus 370 ~~~~~l-vGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPV 448 (551)
T TIGR02288 370 TAIDGL-LGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPI 448 (551)
T ss_pred HHHHHh-cCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCE
Confidence 998875 1 12333221 12 23 4 2 3 6799999999999
Q ss_pred EEEEEeCCHHHHHHHHHcc--CCC-ceeEEEecCHHHHHHHHhcc----------CeeeEEEcCCCCCC
Q 005798 561 CTVEIVDDVRAAIDHIHQH--GSA-HTDCIVAEDQKVAETFLCQV----------DSAAVFHNASTRFC 616 (676)
Q Consensus 561 l~i~~~~~~deAi~~aN~~--~~G-L~a~vft~d~~~a~~~~~~l----------~~G~v~iN~~~~~~ 616 (676)
++|++|+|+||||+++|++ +|| |++||||+|.++++++.+++ ++|.|+||.+..+.
T Consensus 449 l~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~ 517 (551)
T TIGR02288 449 AFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFS 517 (551)
T ss_pred EEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCC
Confidence 9999999999999999999 667 99999999999999999999 99999999875443
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.2e-64 Score=596.55 Aligned_cols=385 Identities=17% Similarity=0.231 Sum_probs=311.6
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.|++. .++.. .+...+..
T Consensus 11 ~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~----~e~~~-------~~~~~~~~ 79 (862)
T PRK13805 11 VAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGV----VEDKV-------IKNHFASE 79 (862)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCh----HHHHH-------HHHHHHHH
Confidence 67999999999999999999999999999999999999999999999887765542 12211 12334444
Q ss_pred HHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005798 331 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 408 (676)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 408 (676)
.++++....+..|.. . ...+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||.|+..++
T Consensus 80 ~~~~~~~~~~~~g~~-~---~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~ 155 (862)
T PRK13805 80 YIYNSYKDEKTVGVI-E---EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAA 155 (862)
T ss_pred HHHHHhcCCCccccc-C---cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHH
Confidence 454443322223321 1 11234567889999999999999 596 56789999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHH
Q 005798 409 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 486 (676)
Q Consensus 409 ~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~ 486 (676)
+++++++.++ +|+|+||+|++ +.+.++.|..||+||+|+||||+++++.+ ....+|+++|+|||||+||++|||+|.
T Consensus 156 ~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a-~~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 156 KIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAA-YSSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHH-HhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 9999988889 99999999996 55677777788999999999999998766 345799999999999999999999999
Q ss_pred HHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhc-------------------Cc--EEecCccc----
Q 005798 487 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------------------GV--GLFGGPRA---- 540 (676)
Q Consensus 487 A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-------------------~~--~~~g~~~~---- 540 (676)
|++.+++|+|+|+| +|+|++|+|||++|| |+|+++|+++...+ +. .++|+...
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~ 313 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIY-DEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAE 313 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhH-HHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHH
Confidence 99999999999877 999999999999999 79999987642110 01 12333210
Q ss_pred --cccc-c--------C----CCCCcccccccCceEEEEEeCCHHHHHHHHHc----cCCCceeEEEecCHHHHHHHHhc
Q 005798 541 --SKLL-Q--------I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQ 601 (676)
Q Consensus 541 --~~~~-p--------v----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~----~~~GL~a~vft~d~~~a~~~~~~ 601 (676)
..++ | + +++++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|+++
T Consensus 314 ~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~ 392 (862)
T PRK13805 314 MAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLR 392 (862)
T ss_pred HcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhh
Confidence 1112 2 2 3467666 799999999999999999999998 48999999999999999999999
Q ss_pred cCeeeEEEcCCC----------CCCCCCcccCcccccccccccccccccchhcceeEEEEEEcCcee
Q 005798 602 VDSAAVFHNAST----------RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 658 (676)
Q Consensus 602 l~~G~v~iN~~~----------~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~~~ 658 (676)
+++|+|+||.++ .+.+++|||+|. +|.+ ..+|+.|+++|++.|+|..+....
T Consensus 393 l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G~-~g~~----~~~g~~g~~~~~~~k~v~~~~~~~ 454 (862)
T PRK13805 393 MKACRILVNTPSSQGGIGDLYNKLAPSLTLGCGS-WGGN----SVSENVGAKHLLNIKTVAKRRENM 454 (862)
T ss_pred CCccEEEEeCCccccccccccCCcCccccccccC-CCCC----cCCCCCCHHHhheeeeeeeccccc
Confidence 999999999886 457889999744 4433 246999999999999998765433
No 124
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=2.9e-61 Score=538.95 Aligned_cols=391 Identities=16% Similarity=0.140 Sum_probs=303.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHH
Q 005798 252 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 331 (676)
Q Consensus 252 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 331 (676)
.++++++++|++||+.|+++++++|.++|++++++|++++++|+++++.|+|++..+ +.- .....+++..++.
T Consensus 84 adv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~----a~q---a~~~~evd~a~e~ 156 (549)
T cd07127 84 CDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMM----AFQ---AGGPHAQDRGLEA 156 (549)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHH----HHh---cccHHHHHHHHHH
Confidence 389999999999999999999999999999999999999999999988877665421 110 0000245555555
Q ss_pred HHHHhccccc-ccccc---cccc-cCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHH
Q 005798 332 IRILADMEEP-IGQIL---KRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSN 404 (676)
Q Consensus 332 ~~~~~~~~~~-~~~~~---~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~ 404 (676)
++++++.... .+... +... .+.....+..++|+|||++|+|| ||. ..+.++++||++||+||+|||+.+|+++
T Consensus 157 ~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~ 236 (549)
T cd07127 157 VAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPL 236 (549)
T ss_pred HHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhH
Confidence 5554432211 11100 0000 00001113467999999999998 585 5578999999999999999999999999
Q ss_pred HHHHHHHHHhcccc-cCcCceEEecC--CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEeecCCcceEEEcC
Q 005798 405 AILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDK 480 (676)
Q Consensus 405 ~~l~~l~~~al~~a-lP~gv~~~v~~--~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGGk~p~iV~~ 480 (676)
.++.+++.++|.++ +|+|+||+|++ ++++++.|..||+|++|+||||+++|+.|++.+. +|+++|||||||+||++
T Consensus 237 ~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~~~v~~ElGGkn~~IV~~ 316 (549)
T cd07127 237 AITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQAQVYTEKAGVNTVVVDS 316 (549)
T ss_pred HHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhccCcEEEecCCcCeEEECC
Confidence 88887777777789 99999999985 3567888889999999999999999999998875 89999999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCc-cccccceEEEeCc---------cCChhHHHHHHHHHHhcC-------------------
Q 005798 481 SANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELVVELQHEG------------------- 531 (676)
Q Consensus 481 dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~---------i~d~~f~~~l~~~~~~~~------------------- 531 (676)
|||++.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|+++++++-
T Consensus 317 dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~-d~f~~~L~~~~~~l~Gdp~~~~~~~Gpli~~~~~ 395 (549)
T cd07127 317 TDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSF-DEVAADLAAAIDGLLADPARAAALLGAIQSPDTL 395 (549)
T ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHH-HHHHHHHHHHHHHhcCCccccccccCCcCCHHHH
Confidence 99999999999999999987 9999999999999 89 799999999887651
Q ss_pred ----------cEEecCccc------cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccC--C-Cce
Q 005798 532 ----------VGLFGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHG--S-AHT 584 (676)
Q Consensus 532 ----------~~~~g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~--~-GL~ 584 (676)
..++|+... ..++ | | ++|++++||+||||++|++|+|.||||+++|++. | ||+
T Consensus 396 ~ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt 475 (549)
T cd07127 396 ARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMT 475 (549)
T ss_pred HHHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCce
Confidence 012333221 1223 6 2 4689999999999999999999999999999984 4 699
Q ss_pred eEEEecCHHHHHHHHhc-cCee-eEEEcCCCCCC--CCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 585 DCIVAEDQKVAETFLCQ-VDSA-AVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 585 a~vft~d~~~a~~~~~~-l~~G-~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+||||+|.+.++++.++ .++| +++||...... ...|||+.+.||... ..+.....-.|...|-..+
T Consensus 476 ~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~---~a~~~~~~~~fv~~r~~~~ 545 (549)
T cd07127 476 VGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP---AANAALTDGAFVANRFRVV 545 (549)
T ss_pred EEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc---ccccccchhhhhhcceEEE
Confidence 99999999999999987 7777 99999443222 334599888776542 1223455556666654443
No 125
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=1.3e-60 Score=529.19 Aligned_cols=374 Identities=21% Similarity=0.256 Sum_probs=314.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHH
Q 005798 256 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 335 (676)
Q Consensus 256 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (676)
+++++|++||+.|+.+|.++|.++|+++++.|.+++++|+++++.|++++.+ +. ..++..+++.++++
T Consensus 2 ~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~----~~--------~~ei~~~i~~l~~~ 69 (432)
T cd07078 2 AAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIE----EA--------LGEVARAADTFRYY 69 (432)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999998877654321 11 23455555555554
Q ss_pred hccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHH
Q 005798 336 ADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVIT 412 (676)
Q Consensus 336 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 412 (676)
+...+. .+.... ....+...+.+++|+|||++|+|| +|. ..++.+++||++||+||+|||+.+|.++..+.+++.
T Consensus 70 ~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~ 147 (432)
T cd07078 70 AGLARRLHGEVIP--SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLA 147 (432)
T ss_pred HHHHHHhcCcccc--ccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 433222 111111 112244567889999999999998 585 578999999999999999999999999999999998
Q ss_pred Hhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCCCCHHHH
Q 005798 413 SAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVA 487 (676)
Q Consensus 413 ~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~A 487 (676)
+ + +|+|+++++++ .+..+..|..|+++|+|+||||+.+|+.|++.+. +|+++|+|||||+||++|||++.|
T Consensus 148 ~----ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~a 223 (432)
T cd07078 148 E----AGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAA 223 (432)
T ss_pred H----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHH
Confidence 6 7 89999999995 4446777778899999999999999999988774 899999999999999999999999
Q ss_pred HHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc----------------------------------
Q 005798 488 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------------- 532 (676)
Q Consensus 488 ~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------------------------------- 532 (676)
++.+++++|.|+| .|++++++|||++++ ++|+++|+++++++..
T Consensus 224 a~~i~~~~~~~~Gq~C~a~~~i~v~~~~~-~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~ 302 (432)
T cd07078 224 VKGAVFGAFGNAGQVCTAASRLLVHESIY-DEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGA 302 (432)
T ss_pred HHHHHHHHHhccCCCccCCceEEEcHHHH-HHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 9999999999977 999999999999999 7999999999876531
Q ss_pred EE-ecCcccc---c-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHh
Q 005798 533 GL-FGGPRAS---K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 600 (676)
Q Consensus 533 ~~-~g~~~~~---~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~ 600 (676)
++ +|+.... + ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 303 ~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~ 382 (432)
T cd07078 303 KLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAE 382 (432)
T ss_pred EEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHH
Confidence 12 2443321 2 33 5 2 357899999999999999999999999999999999999999999999999999
Q ss_pred ccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 601 QVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 601 ~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
++++|.|+||+.... .+..||||.+.||+| +++|++|+++|++.|++.
T Consensus 383 ~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g----~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 383 RLEAGTVWINDYSVGAEPSAPFGGVKQSGIG----REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred hcCcceEEECCCCCCCCCCCCcCCcCcCcCC----ccchHHHHHHhhceEEEE
Confidence 999999999998777 778999999998875 357999999999999875
No 126
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.9e-62 Score=492.27 Aligned_cols=406 Identities=17% Similarity=0.191 Sum_probs=338.6
Q ss_pred HHHHhCCceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 005798 229 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 308 (676)
Q Consensus 229 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 308 (676)
..+.+|+-.|.+...+ +.|+++-+-.|++||++|.+.+..+|++.|+.+.+.+.+|.|.+++...+|.++.
T Consensus 69 ycPatg~yLG~fp~~~------~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKT--- 139 (583)
T KOG2454|consen 69 YCPATGKYLGYFPALS------PTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKT--- 139 (583)
T ss_pred ecCCCcceeeecccCC------hhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCch---
Confidence 3456777788887767 7799999999999999999999999999999999999999999999777776543
Q ss_pred chhHHHHHHhhcChHHHHHHHHHHHHHhccc-ccccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005798 309 GYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 385 (676)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 385 (676)
+.++.+.++..+.+.+.+.+..-+.|.+.. ++.+... .-...++.++|+||+++|.|| +|+ ..+.++..|
T Consensus 140 -mvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~------~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaA 212 (583)
T KOG2454|consen 140 -MVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAM------LYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAA 212 (583)
T ss_pred -hhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhhe------eeccceEEEeecceEEEeeecCCchhhhhhHHHHH
Confidence 223444455555566666655544443321 1111111 011246889999999999999 586 567888999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005798 386 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 463 (676)
Q Consensus 386 LaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 463 (676)
|.+||++|+|-||.+.+++....++++.+|... -||+++|++++-+++++.|.+|+.|++|.|.||..+++.|++.|+
T Consensus 213 lFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk 292 (583)
T KOG2454|consen 213 LFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK 292 (583)
T ss_pred HhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh
Confidence 999999999999999999999999999998767 999999999987788999999999999999999999999998773
Q ss_pred --CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------
Q 005798 464 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 532 (676)
Q Consensus 464 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 532 (676)
+|+++|||||+|+||++|||++..+..+++|-|..+| .|+..+|++||+++| |.|+..|.++++....
T Consensus 293 ~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Y-d~~i~~l~~rv~s~r~G~~~~~~v 371 (583)
T KOG2454|consen 293 TLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIY-DAFIGQLTKRVKSVRAGPPLTGRV 371 (583)
T ss_pred hcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchH-HHHHHHHHHHHHHHHcCCCccCcc
Confidence 9999999999999999999999999999999999887 999999999999999 7999999888876411
Q ss_pred --------------------------EE-ecCccc-------cccc-c---C---CCCCcccccccCceEEEEEeCCHHH
Q 005798 533 --------------------------GL-FGGPRA-------SKLL-Q---I---PETRLFHHEYNSMVCTVEIVDDVRA 571 (676)
Q Consensus 533 --------------------------~~-~g~~~~-------~~~~-p---v---~~~~~~~eE~FGPVl~i~~~~~~de 571 (676)
++ .||.+. ..+| | | ++|.|+|||.|||+++|+++++.|+
T Consensus 372 DMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh 451 (583)
T KOG2454|consen 372 DMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEH 451 (583)
T ss_pred chhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHH
Confidence 11 133221 1233 3 2 4699999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 572 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 572 Ai~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
+|++||+++|||+++||+.|..++.++++++++|+|.||+-..+ .-.+||||.+.||+|+ ..|.+|++..++.|+
T Consensus 452 ~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGr----FaG~EGLrg~Cn~Ks 527 (583)
T KOG2454|consen 452 VIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGR----FAGIEGLRGCCNVKS 527 (583)
T ss_pred HHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccc----cccHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999996544 3458999999998863 458999999999999
Q ss_pred EEEcC
Q 005798 651 ILRGN 655 (676)
Q Consensus 651 v~~~~ 655 (676)
|.+..
T Consensus 528 v~yd~ 532 (583)
T KOG2454|consen 528 VAYDR 532 (583)
T ss_pred eeccc
Confidence 98763
No 127
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=5.8e-59 Score=505.06 Aligned_cols=355 Identities=22% Similarity=0.255 Sum_probs=301.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHHHHhccc
Q 005798 260 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 339 (676)
Q Consensus 260 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (676)
+|++||++|+++|.++|.++|+++++.|.++.++|++++..|++++.. ++ ..|+...++.+++++...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~----~~--------~~ev~~~~~~l~~~~~~~ 69 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE----EA--------LGEVARAIDTFRYAAGLA 69 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999998877654321 11 235555566666554332
Q ss_pred ccc-cccccccccCCCcEEEEEeeceeEEEEEcCCC-hhh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 005798 340 EPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 416 (676)
Q Consensus 340 ~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~~-~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~ 416 (676)
+.. +...+ ....+...+.+++|+|||++|.||+ |.+ .++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~--- 144 (367)
T cd06534 70 DKLGGPELP--SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQE--- 144 (367)
T ss_pred HHhcCCccc--ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHh---
Confidence 211 11111 1123455678899999999999985 764 789999999999999999999999999999999986
Q ss_pred cc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEeecCCcceEEEcCCCCHHHHHHHH
Q 005798 417 DT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNIV 491 (676)
Q Consensus 417 ~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~A~~~i 491 (676)
+ +|+|+++++++ .++.++.|..|+++|.|+||||+++++.|.+.+. +|+++|+||+||+||++|||++.|++.+
T Consensus 145 -ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i 223 (367)
T cd06534 145 -AGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGA 223 (367)
T ss_pred -cCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 7 89999999996 4447777888899999999999999999988774 8999999999999999999999999999
Q ss_pred HHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccccCCCCCcccccccCceEEEEEeCCHH
Q 005798 492 IDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 492 v~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
++++|.++| .|++++++|||++++ ++|+++|+ .++.... +++++++||+||||++|++|+|+|
T Consensus 224 ~~~~~~~~gq~C~s~~~v~v~~~~~-~~f~~~l~--------tl~~~~~-------~~~~~~~~E~fgPv~~v~~~~~~~ 287 (367)
T cd06534 224 VFGAFFNAGQICTAASRLLVHESIY-DEFVEKLV--------TVLVDVD-------PDMPIAQEEIFGPVLPVIRFKDEE 287 (367)
T ss_pred HHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHhhc--------eeeeCCC-------CCCccccCCccCceEEEEecCCHH
Confidence 999999877 999999999999999 79998887 2221100 345689999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC-CCCCcccCcccccccccccccccccchhcceeEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 649 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 649 (676)
|||+++|++++||++||||+|.+.++++++++++|+|+||+++.. .+..||||.++||+|. ++|++++++||+.|
T Consensus 288 eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~k 363 (367)
T cd06534 288 EAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRTK 363 (367)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceEE
Confidence 999999999999999999999999999999999999999998777 7788999999998863 46999999999999
Q ss_pred EEE
Q 005798 650 WIL 652 (676)
Q Consensus 650 ~v~ 652 (676)
++.
T Consensus 364 ~i~ 366 (367)
T cd06534 364 TVV 366 (367)
T ss_pred EEe
Confidence 874
No 128
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-58 Score=472.51 Aligned_cols=407 Identities=43% Similarity=0.735 Sum_probs=389.3
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHH
Q 005798 253 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 332 (676)
Q Consensus 253 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (676)
++.+..++||+|....+.++.++|.+.|.++|+.|+++.++|.+++.+|++.++++|.++++++|+..+..+++.+++.+
T Consensus 4 ~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~gl 83 (417)
T COG0014 4 ELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADGL 83 (417)
T ss_pred HHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHHH
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHH
Q 005798 333 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVIT 412 (676)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 412 (676)
+..+.+++|+|+.+..+..++|...+.+|.|+|||++|+...|++++...+.||++||+||||.+..+-.|...|.++++
T Consensus 84 ~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~ 163 (417)
T COG0014 84 RQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQ 163 (417)
T ss_pred HHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHH
Confidence 99999999999988877778899999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhcccc-cCcCceEEec--CCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHHHHH
Q 005798 413 SAIPDT-VGEKLIGLVT--SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKN 489 (676)
Q Consensus 413 ~al~~a-lP~gv~~~v~--~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~ 489 (676)
++|.++ +|++.+|+|+ +++.+.++|..+..||+|...||....+.|.+.+..||+.-+-|++++||+++||+|.|.+
T Consensus 164 ~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~~ 243 (417)
T COG0014 164 EALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKALK 243 (417)
T ss_pred HHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHHH
Confidence 999999 9999999998 4788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCcccccccc---C-CCCCcccccccCceEEEEE
Q 005798 490 IVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ---I-PETRLFHHEYNSMVCTVEI 565 (676)
Q Consensus 490 ~iv~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p---v-~~~~~~~eE~FGPVl~i~~ 565 (676)
.++++|......|++.+.++||+.++ ++|+.+|.+.+...|+++.|++....++| . .+..-|..|+..++|.|..
T Consensus 244 ii~nAKtqrPs~CNA~EtLLVh~~ia-~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ilavkv 322 (417)
T COG0014 244 IIVNAKTQRPSVCNAAETLLVHRAIA-KSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILAVKV 322 (417)
T ss_pred HHHcccCCCCcccchHHHHHcCHHHH-HHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeEEEE
Confidence 99999999999999999999999999 79999999999999999988876555554 2 2467899999999999999
Q ss_pred eCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcc
Q 005798 566 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 645 (676)
Q Consensus 566 ~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 645 (676)
|+++||||+.+|.++.+||-+|.|+|...+++|.+++++..||||.+++|.+++.||+|.|.|+|+++.|.+||.|++++
T Consensus 323 Vd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~L 402 (417)
T COG0014 323 VDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEAL 402 (417)
T ss_pred eCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCceeec
Q 005798 646 LTTRWILRGNGHVVD 660 (676)
Q Consensus 646 t~~k~v~~~~~~~~~ 660 (676)
|..|++..+.++.|+
T Consensus 403 Ts~Kyiv~G~Gqvr~ 417 (417)
T COG0014 403 TSYKYIVRGDGQVRP 417 (417)
T ss_pred cceeEEEeCCceecC
Confidence 999999999999874
No 129
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.9e-55 Score=451.68 Aligned_cols=364 Identities=15% Similarity=0.167 Sum_probs=301.3
Q ss_pred hhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHH
Q 005798 251 QVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSL 328 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~ 328 (676)
-.||++|+++|+.||. +|+++|..+|.+.|.++|+++++|++||+.+.+.|.+..- +-++ ...+...
T Consensus 458 v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavy----tlal-------kthvgms 526 (881)
T KOG2452|consen 458 VTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVY----TLAL-------KTHVGMS 526 (881)
T ss_pred hhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhcccccee----eeee-------hhhcCce
Confidence 4589999999999997 5999999999999999999999999999987665543211 1111 1245566
Q ss_pred HHHHHHHhccccc-cccccccc-ccCCCcEEEEEeeceeEEEEEcCC-Chhh-HHHHHHHHHHhCCEEEEeCCcchHHHH
Q 005798 329 AKSIRILADMEEP-IGQILKRT-ELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSN 404 (676)
Q Consensus 329 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGN~vVlKps~~tp~t~ 404 (676)
++.+||++++.+. .|.++|.. .+++...+.++++|+|||++|+|| ||.+ ..|+.+.+|+|- -
T Consensus 527 i~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~--------------~ 592 (881)
T KOG2452|consen 527 IQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ--------------V 592 (881)
T ss_pred ehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH--------------H
Confidence 7778888877654 45555432 223444577899999999999999 5864 569998888752 1
Q ss_pred HHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC----CCEEeecCCcceEEEc
Q 005798 405 AILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK----IPVLGHADGICHVYVD 479 (676)
Q Consensus 405 ~~l~~l~~~al~~alP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~----~~~~lElGGk~p~iV~ 479 (676)
..++++ .||+|+++| +..+|+-|..||+|++|-|||||++|+.||+.|+ |++.|||||++|+|++
T Consensus 593 ~k~~e~----------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iif 662 (881)
T KOG2452|consen 593 LKFAEL----------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIF 662 (881)
T ss_pred hhhhhh----------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEE
Confidence 123332 489999995 7889999999999999999999999999999984 8999999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCc--------------------------
Q 005798 480 KSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------- 532 (676)
Q Consensus 480 ~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------------------------- 532 (676)
.||||++|++..+.+.|+|-| .|+++-|+||.+||+ |+|+++++++.+++++
T Consensus 663 ad~dl~kav~~~~~~vff~kgenciaagr~fi~~sih-d~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~ 741 (881)
T KOG2452|consen 663 ADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIH-DEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYC 741 (881)
T ss_pred ecCcHHHHHHhhccceeecCCcchhhhcceeehhhhh-HHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999 6999999999998743
Q ss_pred --------EE-ecCcccc--c-cc-c-C-----CCCCcccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEecC
Q 005798 533 --------GL-FGGPRAS--K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAED 591 (676)
Q Consensus 533 --------~~-~g~~~~~--~-~~-p-v-----~~~~~~~eE~FGPVl~i~~~~--~~deAi~~aN~~~~GL~a~vft~d 591 (676)
++ +||.+.. + +| | | .+|-+..||.||||++|.+|+ |+|+.++.+|+++|||+++|||+|
T Consensus 742 ~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd 821 (881)
T KOG2452|consen 742 QHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRD 821 (881)
T ss_pred HHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecc
Confidence 11 3443321 2 33 3 3 246788999999999999996 678999999999999999999999
Q ss_pred HHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEEEEEc
Q 005798 592 QKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 654 (676)
Q Consensus 592 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 654 (676)
..++.++++.+++|.|+||.....+...||||.++||+|. ..|...+.+|..+|+|++.
T Consensus 822 ~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgk----d~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 822 INKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGK----DLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred cchhhhhhhhhccceEEEeeccccccccCCCCcccccccc----chhHHHHhhheeeEEEEee
Confidence 9999999999999999999987777788999999999873 3588999999999999874
No 130
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=7.8e-55 Score=456.69 Aligned_cols=376 Identities=19% Similarity=0.220 Sum_probs=317.8
Q ss_pred CceeeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHH
Q 005798 235 KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSL 314 (676)
Q Consensus 235 ~~iGT~i~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~ 314 (676)
+.+|++..++ .+|+++|++.|.+|++.|..+|+.+|+.+|++++|+++.+..+|..++.+|.+|+.. .
T Consensus 139 dvVG~V~ea~------~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~----n-- 206 (769)
T COG4230 139 DIVGTVTEAT------EADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLS----N-- 206 (769)
T ss_pred HCeeeeeecC------HHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh----h--
Confidence 4679998888 889999999999999999999999999999999999999999999988776654422 2
Q ss_pred HHHhhcChHHHHHHHHHHHHHhccccc-ccccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCE
Q 005798 315 VSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNG 391 (676)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~ 391 (676)
...|++++++.+|||+...+. .+. ..++|+|+|.+|+|| ||. +....++.||++||+
T Consensus 207 ------aIAEVREAVDFlrYYA~~ar~~~g~--------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~ 266 (769)
T COG4230 207 ------AIAEVREAVDFLRYYAGQARDTFGN--------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS 266 (769)
T ss_pred ------HHHHHHHHHHHHHHHHHHHhcccCc--------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCc
Confidence 245899999999999965431 111 336899999999999 586 445688899999999
Q ss_pred EEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhc----C--
Q 005798 392 LLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----K-- 463 (676)
Q Consensus 392 vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a----~-- 463 (676)
|+-||+|+||+.+..-.+++++ + +|++++|+++| ++++|..|..|++++.|.|||||++.+.|.+.- +
T Consensus 267 VlAKPAEqTpLIAa~aV~ll~e----AGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~ 342 (769)
T COG4230 267 VLAKPAEQTPLIAAQAVRLLHE----AGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRP 342 (769)
T ss_pred cccCccccccHHHHHHHHHHHH----cCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999997 7 99999999996 778999999999999999999999999997653 2
Q ss_pred CCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCcE----E---e
Q 005798 464 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----L---F 535 (676)
Q Consensus 464 ~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----~---~ 535 (676)
.|++.|.||.|+||||.+|--|+++..++.|+|..+| +|++..-++|+++++ |..++.|+-++.++.+. + +
T Consensus 343 ~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvA-d~~l~mLKGAm~el~~G~p~~l~tDV 421 (769)
T COG4230 343 IPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVA-DRILTMLKGAMAELRVGNPDRLTTDV 421 (769)
T ss_pred CceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHH-HHHHHHHHHHHHHhccCCccceeccc
Confidence 7999999999999999999999999999999999987 999999999999999 79999999999887431 0 0
Q ss_pred cC----c--------------------------c--ccccc-c-C---CCCCcccccccCceEEEEEeC--CHHHHHHHH
Q 005798 536 GG----P--------------------------R--ASKLL-Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHI 576 (676)
Q Consensus 536 g~----~--------------------------~--~~~~~-p-v---~~~~~~~eE~FGPVl~i~~~~--~~deAi~~a 576 (676)
|. + . ...|+ | + +.-.-++.|+|||||.|++|+ ++|+.|+.+
T Consensus 422 GPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~I 501 (769)
T COG4230 422 GPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRYKRDELDEVIDQI 501 (769)
T ss_pred cccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEecHHHHHHHHHHH
Confidence 10 0 0 00112 2 1 223457999999999999995 889999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 577 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 577 N~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
|.++||||.+|||+-.+.+.++.+++++|++|||+.... ..-.||||-+-||.| ...+|+..+..|+..+.
T Consensus 502 NatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTG---PKAGGp~YL~Rl~~~~p 574 (769)
T COG4230 502 NATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG---PKAGGPLYLLRLVSERP 574 (769)
T ss_pred hccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCC---CCCCChHHHHHHHhcCC
Confidence 999999999999999999999999999999999987643 345699987666554 34679999988887765
No 131
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-50 Score=396.81 Aligned_cols=422 Identities=63% Similarity=0.969 Sum_probs=389.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHHHHH
Q 005798 254 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 333 (676)
Q Consensus 254 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 333 (676)
+++..+.||++++..+.++.++|.++|.+++++|+.++.+|.+++..|+..+++.|+.++++.|+......+..+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred HHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005798 334 ILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 413 (676)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 413 (676)
.+++..+++|+........++...+.+-.|+||.++|+...|......++.|+++||.+++|....+..+...+.+++++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~ 161 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQE 161 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHH
Confidence 99998899998765444457788888899999999999999987777788899999999999999999999999999999
Q ss_pred hcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEeecCCcceEEEcCCCCHHHHHHHHH
Q 005798 414 AIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 492 (676)
Q Consensus 414 al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv 492 (676)
|+.+. .|.+.+|+|+.++++.++|..+..||+|...||+...|.|...+.+||+..--|-+.+||++|||+++|.+.+.
T Consensus 162 al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~ 241 (433)
T KOG4165|consen 162 ALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVR 241 (433)
T ss_pred HhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHh
Confidence 99888 89999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred HhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccccC--CCCCcccccccCceEEEEEeCCHH
Q 005798 493 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVR 570 (676)
Q Consensus 493 ~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FGPVl~i~~~~~~d 570 (676)
.++..+.-.|+|.+.+++|++.....|.+.+...++..|++++++++...+..+ |...-|+.|+-.-.++|-.++|.+
T Consensus 242 DaK~dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~ 321 (433)
T KOG4165|consen 242 DAKCDYPAACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEVVDSVQ 321 (433)
T ss_pred cccCCCchhhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeeecccHH
Confidence 999988889999999999998432589999999999999999988865443223 346678999988899999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCCCCCCcccCcccccccccccccccccchhcceeEEE
Q 005798 571 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 650 (676)
Q Consensus 571 eAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 650 (676)
+||..+|.++.+||-+|.|+|.+.|++|.+.+++..||+|.++++.+++.||.|.|.|+|+++.|.+||.|++.++.+||
T Consensus 322 ~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw 401 (433)
T KOG4165|consen 322 SAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKW 401 (433)
T ss_pred HHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCceeec---CCCCceeeccccCCC
Q 005798 651 ILRGNGHVVD---GDQGVVYTHKNLALQ 675 (676)
Q Consensus 651 v~~~~~~~~~---~~~~~~~~~~~~~~~ 675 (676)
+..+.++... .+++.+|+|+++|++
T Consensus 402 ~lRG~gqvvsd~~~~G~~~y~H~~l~i~ 429 (433)
T KOG4165|consen 402 LLRGKGQVVSDFNEGGKRAYLHEDLPID 429 (433)
T ss_pred EEecCCceeccccCCCceeeeecCCChh
Confidence 9999999663 577999999999986
No 132
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.6e-51 Score=406.36 Aligned_cols=391 Identities=17% Similarity=0.200 Sum_probs=323.8
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 330 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (676)
-+|.+.+++.|++|++.|...|...|.++.+++.|.|+...+.|.++...+|++....| ..|++..++
T Consensus 54 v~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaeg------------vgevqeyvd 121 (507)
T KOG2453|consen 54 VQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEG------------VGEVQEYVD 121 (507)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhc------------chhHHHHHH
Confidence 56889999999999999999999999999999999999999999999888877654323 246677777
Q ss_pred HHHHHhcccccc-cccccccccCCCcEEEEEeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHH
Q 005798 331 SIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 407 (676)
Q Consensus 331 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l 407 (676)
.+++..++.+.. |...|. . .++......+.|+|+|++|+.+ ||. .-.|.-+.|+.+||+|++||++.+|+++...
T Consensus 122 icdyavglsr~l~g~i~ps-e-rpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAv 199 (507)
T KOG2453|consen 122 ICDYAVGLSRSLEGKIFPS-E-RPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAV 199 (507)
T ss_pred HHHHhhhhhhhhCCcccCC-C-CCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHH
Confidence 777765554433 444443 1 2344455778999999999986 685 4457777899999999999999999999999
Q ss_pred HHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEeecCCcceEEEcCCCC
Q 005798 408 HKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSAN 483 (676)
Q Consensus 408 ~~l~~~al~~a-lP~gv~~~v~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dAD 483 (676)
.+++.+.|.+. +|++......|+.+.++.+..+.|++.++||||+++||.+.+.- .-+.+|||||||+.||++|||
T Consensus 200 tklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edad 279 (507)
T KOG2453|consen 200 TKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDAD 279 (507)
T ss_pred HHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEecccc
Confidence 99999999888 99998888888888999999999999999999999999987654 367899999999999999999
Q ss_pred HHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCcE-------E---------------------
Q 005798 484 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------L--------------------- 534 (676)
Q Consensus 484 l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-------~--------------------- 534 (676)
|..++...++++...+| +|+...|++||+++| |+.+++|+++.++..+. +
T Consensus 280 l~lvvps~lfaavgtagqrctt~rrl~~hesvy-d~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak 358 (507)
T KOG2453|consen 280 LNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVY-DQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAK 358 (507)
T ss_pred ceeeehHHHHHHhcccccchhhhhHHHhhHHHH-HHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHH
Confidence 99999999999999887 999999999999999 79999999988875320 1
Q ss_pred -------ecCc---cccccc-c-C----CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHH
Q 005798 535 -------FGGP---RASKLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 598 (676)
Q Consensus 535 -------~g~~---~~~~~~-p-v----~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~ 598 (676)
+|+. +...|+ | | .+..+..+|.|.|||.|.+|++++||+.+-|..+.||++||||+|..++.|+
T Consensus 359 ~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw 438 (507)
T KOG2453|consen 359 ASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRW 438 (507)
T ss_pred hcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhh
Confidence 1221 111222 4 2 2568899999999999999999999999999999999999999999999999
Q ss_pred Hh--ccCeeeEEEcCCCCCC-CCCcccCcccccccccccccccccchhcceeEEEEEEcCceeec
Q 005798 599 LC--QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD 660 (676)
Q Consensus 599 ~~--~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~~~~~ 660 (676)
.- .-++|.|+||-++... -+..|||-++.|-+ ++.|.++.++|++..+-+++++..-|
T Consensus 439 ~gpkgsdcgivnvniptsgaeiggafggek~tggg----resgsdswkqymrrstctinyskelp 499 (507)
T KOG2453|consen 439 MGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDSWKQYMRRSTCTINYSKELP 499 (507)
T ss_pred hCCCCCccceEEecCCCCchhhcccccCccccCCC----cccCchHHHHHHhhceeeeeccccCc
Confidence 74 7899999999987653 45678877765433 56788999999998888887764433
No 133
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-45 Score=376.23 Aligned_cols=380 Identities=17% Similarity=0.186 Sum_probs=291.5
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLA 329 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 329 (676)
..+|++|+++|.+|++.|..+|..+|.+++++.|+++. +.+-+|..... ++.++. .-++.+ .-+.+++
T Consensus 95 ~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatM--lgqgKt--~~qAei-------Da~~eLi 163 (561)
T KOG2455|consen 95 KKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATM--LGQGKT--AIQAEI-------DAAAELI 163 (561)
T ss_pred HHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHH--hcCCcc--hHHHHH-------HHHHHHH
Confidence 67999999999999999999999999999999999998 55555544322 222221 111211 1233445
Q ss_pred HHHHHHhcccccccccccccccCCCcEEEEEeece-eEEEEEcCCChh-hHHH-HHHHHHHhCCEEEEeCCcchHHHHHH
Q 005798 330 KSIRILADMEEPIGQILKRTELADGLILEKTSCPL-GVLLIVFESRPD-ALVQ-IASLAIRSGNGLLLKGGKEAMRSNAI 406 (676)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~~P~-~~~~-~~~~ALaaGN~vVlKps~~tp~t~~~ 406 (676)
+.+|+.+.-+...-...+. ....+.+....++|+ |-|++|+||+-. +... ..+|||+ ||+|++|||..+.++++.
T Consensus 164 df~R~na~ya~eL~~~qpi-~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssYi 241 (561)
T KOG2455|consen 164 DFFRFNAKYASELYAQQPI-SQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAALSSYI 241 (561)
T ss_pred HHHHHhHHHHHHhhhcCCc-cccCCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhHHHHHH
Confidence 5555443221111000010 012233444568898 999999998653 4333 4567775 999999999999999999
Q ss_pred HHHHHHHhcccc-cCcCceEEec-CCChhhhhhcCCCCccEEEeecCHHHHHHHHHhc---------CCCEEeecCCcce
Q 005798 407 LHKVITSAIPDT-VGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICH 475 (676)
Q Consensus 407 l~~l~~~al~~a-lP~gv~~~v~-~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---------~~~~~lElGGk~p 475 (676)
+.++++| | +|+|++|.|+ ++...++.+..+|.+.++.||||+.+=|.+.+.- --+++.|.||||-
T Consensus 242 i~~il~E----AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNF 317 (561)
T KOG2455|consen 242 IYRILRE----AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNF 317 (561)
T ss_pred HHHHHHH----cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcce
Confidence 9999997 8 9999999999 5778888888999999999999999988876643 2678999999999
Q ss_pred EEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCcE---------------------
Q 005798 476 VYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG--------------------- 533 (676)
Q Consensus 476 ~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~--------------------- 533 (676)
-+|.++||++.++...+.++|..+| .|+|.+|+||++++. +.+.++|++...++.+.
T Consensus 318 HfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~w-p~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~r 396 (561)
T KOG2455|consen 318 HFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLW-PQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFAR 396 (561)
T ss_pred EEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhc-HHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHH
Confidence 9999999999999999999998776 999999999999999 89999998877765320
Q ss_pred ----------------EecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeC--CHHHHHHHH-HccCCCce
Q 005798 534 ----------------LFGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVD--DVRAAIDHI-HQHGSAHT 584 (676)
Q Consensus 534 ----------------~~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~i~~~~--~~deAi~~a-N~~~~GL~ 584 (676)
++||.-. .++| | | |.+++|.||+|||||+|+-|+ +++|++.++ |.++|||+
T Consensus 397 l~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLT 476 (561)
T KOG2455|consen 397 LKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALT 476 (561)
T ss_pred HHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceec
Confidence 1233211 2334 5 2 578999999999999999995 589999997 67899999
Q ss_pred eEEEecCHHHHHHHHh--ccCeeeEEEcCCCCC--CCCCcccCcccccccccccccccccchhcceeEEEE
Q 005798 585 DCIVAEDQKVAETFLC--QVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 651 (676)
Q Consensus 585 a~vft~d~~~a~~~~~--~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 651 (676)
++||++|.+...+..+ +..+|+.|||+-... ....||||.+.||... ..+|++-+..|+.++++
T Consensus 477 GaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND---KaGgp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 477 GAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND---KAGGPHYLLRWTSPLSI 544 (561)
T ss_pred cccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC---CCCCceEEEeecCcchh
Confidence 9999999999988877 567999999985443 3567999999998753 24577777777777654
No 134
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-43 Score=356.44 Aligned_cols=226 Identities=43% Similarity=0.665 Sum_probs=209.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++|++.|++||||+||+++.|...|++.+++. .+.. +|+++||||..++..|++.|..+|+.++|
T Consensus 33 l~~~ia~L~~~G~eVilVSSGAiaaG~~~Lg~~~rp~----~l~~------kQA~AAVGQ~~Lm~~y~~~f~~~g~~v~Q 102 (369)
T COG0263 33 LVRQVAALHKAGHEVVLVSSGAIAAGRTRLGLPKRPK----TLAE------KQAAAAVGQVRLMQLYEELFARYGIKVGQ 102 (369)
T ss_pred HHHHHHHHHhCCCEEEEEccchhhhChhhcCCCCCCc----chHH------HHHHHHhCHHHHHHHHHHHHHhcCCeeeE
Confidence 7899999999999999999999999999999998763 4554 56999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+|+|++||.++.++.|+.++|+.||+.|.|||||+||++++ ++..|+|||++|+.+|..++||.|+++||+||
T Consensus 103 iLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDtva~-------~EikfGDND~LsA~VA~lv~ADlLvlLsDiDG 175 (369)
T COG0263 103 ILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDTVAT-------EEIKFGDNDTLSALVAILVGADLLVLLSDIDG 175 (369)
T ss_pred EEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCceee-------eeeeecCCchHHHHHHHHhCCCEEEEEEccCc
Confidence 99999999999999999999999999999999999999999 55689999999999999999999999999999
Q ss_pred cccCCC-CCCCCceeceeehhc-hHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceee
Q 005798 162 LYSGPP-SEPNSKLIHTYIRAK-HQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 239 (676)
Q Consensus 162 Vy~~dP-~~~~a~~i~~i~~~e-~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT 239 (676)
+|++|| ++|++++|++++... -.+.+..++++.++||||..|+.||..|.++|++++|++|..++.+.+++.++..||
T Consensus 176 Lyd~nPr~~pdAk~i~~V~~it~ei~~~aggsgs~~GTGGM~TKl~AA~iA~~aG~~~iI~~g~~~~~i~~~~~~~~~GT 255 (369)
T COG0263 176 LYDANPRTNPDAKLIPEVEEITPEIEAMAGGSGSELGTGGMRTKLEAAKIATRAGVPVIIASGSKPDVILDALEGEAVGT 255 (369)
T ss_pred ccCCCCCCCCCCeeehhhcccCHHHHHHhcCCCCCCCcccHHHHHHHHHHHHHcCCcEEEecCCCcchHHHHHhCCCCcc
Confidence 999999 599999999987422 223566778888999999999999999999999999999999999999999999999
Q ss_pred EEecC
Q 005798 240 LFHRD 244 (676)
Q Consensus 240 ~i~~~ 244 (676)
++.+.
T Consensus 256 ~F~~~ 260 (369)
T COG0263 256 LFEPQ 260 (369)
T ss_pred EEecC
Confidence 99977
No 135
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-40 Score=311.52 Aligned_cols=237 Identities=54% Similarity=0.803 Sum_probs=209.5
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCcc----ccchhhHHHhccHHHHHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQ----NELDGKACAAVGQSSLMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~----~~l~~~~~~avG~~~~~~~~~~~l~~~g~ 77 (676)
+++++.+|+.+|++|+||+|||++.|+++|..+..++ ..+|.++ +...+++++++||++++.+|+..|.++++
T Consensus 37 IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~s---~s~r~~l~~~~~l~e~rA~AAvGQ~~Lmalye~lF~Qy~~ 113 (285)
T KOG1154|consen 37 IVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLPS---SSMRQTLKPQSELAEKRACAAVGQSGLMALYETLFTQYGI 113 (285)
T ss_pred HHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhccc---hhHHHhhCCccchhhHHHHHHhCcchHHHHHHHHHHHhcc
Confidence 6899999999999999999999999998888877653 1233322 23557799999999999999999999999
Q ss_pred ccceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeecc
Q 005798 78 TSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLS 157 (676)
Q Consensus 78 ~~~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lT 157 (676)
...|+++|+.||.+...+.|..++|..||..|+|||+++||++++.+.+..|. -|||++|+.+|..++||.||++|
T Consensus 114 ~iAQvLvT~~Di~d~~~r~Nl~~Ti~eLL~m~viPIvNeNDavs~~~~~~~D~----~dNDsLsA~laaei~ADlLilLs 189 (285)
T KOG1154|consen 114 TIAQVLVTRNDILDEQQRKNLQNTISELLSMNVIPIVNENDAVSPREIPFGDS----SDNDSLAAILAAEIKADLLILLS 189 (285)
T ss_pred chheeeecCcchhhHHHHHHHHHHHHHHHhCCceeeecCCCccCCcccccCCC----CcccHHHHHHHHHhccCEEEEEe
Confidence 99999999999999999999999999999999999999999999966443221 25999999999999999999999
Q ss_pred ccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCce
Q 005798 158 DVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRV 237 (676)
Q Consensus 158 dVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~i 237 (676)
||||+|+++|.....++|...+..+......+|++|.+++|||..|+.||..|...|++|+|+||..|++|.+++.|..+
T Consensus 190 DVdglYt~PPd~~~~~li~~~~~~~~~v~~tfG~~SkvGtGGM~tKv~AA~~A~~~Gv~viI~~g~~p~~I~~iv~g~kv 269 (285)
T KOG1154|consen 190 DVDGLYTGPPDADPSKLIHTFSPGDPQVSTTFGSKSKVGTGGMETKVKAAVNALNAGVSVIITNGDAPENITDIVEGKKV 269 (285)
T ss_pred cccccccCCCCCCcceeeeeeccCCCCCccccCccCccCcCcchhhHHHHHHHhcCCceEEEeCCCChHHHHHHHhhhhh
Confidence 99999998886555789999988777655678889999999999999999999999999999999999999999999999
Q ss_pred eeEEecCC
Q 005798 238 GTLFHRDA 245 (676)
Q Consensus 238 GT~i~~~~ 245 (676)
||.+....
T Consensus 270 gt~f~~~~ 277 (285)
T KOG1154|consen 270 GTFFEQLK 277 (285)
T ss_pred hhhhhhcc
Confidence 99887653
No 136
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=331.10 Aligned_cols=224 Identities=38% Similarity=0.579 Sum_probs=198.5
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++|+++|++||||||||+++|+..+++..++ .+. .+++++++||..++..|...|.++|+++.|
T Consensus 32 la~~I~~l~~~G~~vvlVsSGava~G~~~l~~~~~~-----~~~------~~qalaavGq~~l~~~~~~~f~~~g~~~aq 100 (368)
T PRK13402 32 LVQQIVYLKDQGHQVVLVSSGAVAAGYHKLGFIDRP-----SVP------EKQAMAAAGQGLLMATWSKLFLSHGFPAAQ 100 (368)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhcCccccCCCCCC-----Ccc------HHHHHHHhhHHHHHHHHHHHHHHCCCeEEE
Confidence 688999999999999999999999998766654321 122 257999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+++|.+||.++.++.|+.++|..||+.|+|||+++||++++ ++..|+|||++|+++|.+++||.|+|+|||||
T Consensus 101 vLlT~~d~~~~~~y~n~~~~l~~LL~~g~IPIinenD~v~~-------~el~~GdnD~lAa~vA~~l~Ad~LiilTDVdG 173 (368)
T PRK13402 101 LLLTHGDLRDRERYINIRNTINVLLERGILPIINENDAVTT-------DRLKVGDNDNLSAMVAALADADTLIILSDIDG 173 (368)
T ss_pred EEEecchhhhHHHHHHHHHHHHHHHHCCcEEEEeCCCcEee-------cccccCChHHHHHHHHHHhCCCEEEEEecCCe
Confidence 99999999877788888899999999999999999999987 44678999999999999999999999999999
Q ss_pred cccCCC-CCCCCceeceeeh--hchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCcee
Q 005798 162 LYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVG 238 (676)
Q Consensus 162 Vy~~dP-~~~~a~~i~~i~~--~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iG 238 (676)
||++|| .+|++++|++|++ +|+. .+..++++.+++|||.+|+++|..|.++|++++|+|++.++.|.+++.|+..|
T Consensus 174 vy~~dP~~~p~a~~I~~I~~i~~e~~-~l~~~~~s~~gtGGM~~Kl~Aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~G 252 (368)
T PRK13402 174 LYDQNPRTNPDAKLIKQVTEINAEIY-AMAGGAGSNVGTGGMRTKIQAAKIAMSHGIETFIGNGFTADIFNQLLKGQNPG 252 (368)
T ss_pred EEeCCCCCCCCCEEEEEeccCcHHHH-HHhcccccCcCcCCchHHHHHHHHHHHcCCcEEEEcCCCchHHHHHhcCCCCc
Confidence 999999 4899999999986 4444 34444455689999999999999999999999999999999999999999999
Q ss_pred eEEecC
Q 005798 239 TLFHRD 244 (676)
Q Consensus 239 T~i~~~ 244 (676)
|++.+.
T Consensus 253 T~i~~~ 258 (368)
T PRK13402 253 TYFTPE 258 (368)
T ss_pred eEEecC
Confidence 999876
No 137
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00 E-value=7e-37 Score=316.81 Aligned_cols=239 Identities=59% Similarity=0.850 Sum_probs=200.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccc----ccc---ccCccccchhhHHHhccHHHHHHHHHHHhhh
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS----LAD---LQKPQNELDGKACAAVGQSSLMALYDTLFSQ 74 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~----~~~---l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~ 74 (676)
++++|+.|++.|++||||+||+...|...++........ ..+ .+.....+++++++++||..++..|++.|..
T Consensus 36 l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~ 115 (284)
T cd04256 36 IVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQLKDMPQMELDGRACAAVGQSGLMALYEAMFTQ 115 (284)
T ss_pred HHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccccccCCcchhHHHHHHHHcccHHHHHHHHHHHHH
Confidence 789999999999999999999999998777654320000 000 1111123568899999999999999999999
Q ss_pred CCCccceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCC-CC-ceecchhHHHHHHHHHcCCCe
Q 005798 75 LDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED-SS-GIFWDNDSLAGLLALELKADL 152 (676)
Q Consensus 75 ~g~~~~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~-~~-~~~~~~D~~A~~lA~~l~Ad~ 152 (676)
+++.+.|+++|++||.++.++.|..++|+.||+.|+|||+++||.+.+.+..+++ .+ ..++|+|++|+++|.+++||.
T Consensus 116 ~~~~~~q~llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVi~~nD~v~~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~ 195 (284)
T cd04256 116 YGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAVSPPPEPDEDLQGVISIKDNDSLAARLAVELKADL 195 (284)
T ss_pred cCCcHHHeeeeccccccHHHHHHHHHHHHHHHHCCCEEEEeCCCcccccccccccccccccccChHHHHHHHHHHcCCCE
Confidence 9999999999999999999999989999999999999999999999864211111 11 245999999999999999999
Q ss_pred EeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Q 005798 153 LVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVL 232 (676)
Q Consensus 153 li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~ 232 (676)
|+|+|||||||++||++|++++|++++..+..+ +..++.+.+++|||.+|+++|..|.++|++++|+||+.|+.|.+++
T Consensus 196 Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~-~~~~~~s~~gtGGM~~Kl~Aa~~a~~~Gi~v~I~~G~~~~~i~~~l 274 (284)
T cd04256 196 LILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQS-ITFGTKSRVGTGGMEAKVKAALWALQGGTSVVITNGMAGDVITKIL 274 (284)
T ss_pred EEEEeCCCeeecCCCCCCCCeEcccccHhHHHH-hhcccccCcccCCcHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHH
Confidence 999999999999999889999999999876643 3334445688999999999999999999999999999999999999
Q ss_pred hCCceeeEE
Q 005798 233 EGKRVGTLF 241 (676)
Q Consensus 233 tg~~iGT~i 241 (676)
.|+..||++
T Consensus 275 ~G~~~GT~~ 283 (284)
T cd04256 275 EGKKVGTFF 283 (284)
T ss_pred cCCCCCEEe
Confidence 999999987
No 138
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=1.4e-36 Score=312.86 Aligned_cols=227 Identities=40% Similarity=0.651 Sum_probs=195.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++++..|++||||+||+...|..++++..++ .+++ ++++++++||..++.+|...|..+|++++|
T Consensus 36 ~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~~~~~~----~~~~------~~~a~aa~Gq~~l~~~~~~~~~~~g~~~~q 105 (266)
T PRK12314 36 LVFVISDLMNKGKEVILVSSGAIGAGLTKLKLDKRP----TSLA------EKQALAAVGQPELMSLYSKFFAEYGIVVAQ 105 (266)
T ss_pred HHHHHHHHHHCCCeEEEEeeCcccccceeeccccCC----CCHH------HHHHHHHHhHHHHHHHHHHHHHHcCCeEEE
Confidence 688999999999999999887777777667665432 1222 257999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+++|++||.++.++.|..++|+.||+.|+|||+++||.+++.+ .+..+++||++|+++|.+|+||.|+|+|||||
T Consensus 106 ~llT~~~~~~~~~~~~~~~~l~~ll~~g~IPVv~~nd~v~~~~-----~~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdG 180 (266)
T PRK12314 106 ILLTRDDFDSPKSRANVKNTFESLLELGILPIVNENDAVATDE-----IDTKFGDNDRLSAIVAKLVKADLLIILSDIDG 180 (266)
T ss_pred EEEecccccchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeecc-----ccceecchHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 9999999998888888889999999999999999999998743 23347999999999999999999999999999
Q ss_pred cccCCCC-CCCCceeceeeh--hchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCcee
Q 005798 162 LYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVG 238 (676)
Q Consensus 162 Vy~~dP~-~~~a~~i~~i~~--~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iG 238 (676)
||++||+ +|++++|++|++ .+..+ +..++.+.+++|||++|+++|..|.++|++++|+||+.|+.|.++++|+..|
T Consensus 181 Vy~~dP~~~~~a~~i~~I~~~~~~~~~-~~~~~~~~~~tGGM~~Kl~aa~~a~~~gv~v~I~~g~~~~~i~~~l~g~~~G 259 (266)
T PRK12314 181 LYDKNPRINPDAKLRSEVTEITEEILA-LAGGAGSKFGTGGMVTKLKAAKFLMEAGIKMVLANGFNPSDILDFLEGESIG 259 (266)
T ss_pred ccCCCCCCCCCCeEEEEecCCCHHHHH-HhccCCCCcccCchHHHHHHHHHHHHCCCeEEEEcCCCchHHHHHHcCCCCc
Confidence 9999995 899999999986 33332 2233345579999999999999999999999999999999999999998899
Q ss_pred eEEecC
Q 005798 239 TLFHRD 244 (676)
Q Consensus 239 T~i~~~ 244 (676)
|++.+.
T Consensus 260 T~i~~~ 265 (266)
T PRK12314 260 TLFAPK 265 (266)
T ss_pred eEEccC
Confidence 999754
No 139
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=100.00 E-value=4.2e-36 Score=321.75 Aligned_cols=226 Identities=42% Similarity=0.636 Sum_probs=199.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++++++|+++|||||||.+.++..+++..++ ..+.. +++++++||..++..|...|.++|+++.|
T Consensus 27 la~~I~~l~~~g~~vvlV~sG~~~~g~~~lg~~~~~----~~l~~------~qa~aa~Gq~~l~~~~~~~l~~~Gi~~aq 96 (363)
T TIGR01027 27 LVEQVAALHAAGHEVVIVSSGAIAAGFEALGLPERP----KTLAE------KQALAAVGQVRLMQLYEQLFSQYGIKVAQ 96 (363)
T ss_pred HHHHHHHHHHCCCeEEEEeCcHHhcCccccCCCCCc----cchHH------HHHHHHhChHHHHHHHHHHHHHcCCeEEE
Confidence 678999999999999999999988887777776532 23332 46999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+++|++||.++.++.|..++|..||++|.|||+++||.++. ++..++|+|++|+++|.+|+||.|+|+|||||
T Consensus 97 illt~~d~~~~~~~lna~~~i~~Ll~~g~iPVi~end~v~~-------~~l~~gd~D~lAa~lA~~l~Ad~liilTDVdG 169 (363)
T TIGR01027 97 ILLTRADFSDRERYLNARNTLEALLELGVVPIINENDTVAT-------EEIKFGDNDTLSALVAILVGADLLVLLTDVDG 169 (363)
T ss_pred EEEeccchhhHHHHHHHHHHHHHHHhCCCEEEEeCCCceee-------eecCcCChHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 99999999988888998899999999999999999999876 34567999999999999999999999999999
Q ss_pred cccCCC-CCCCCceeceeehhc-hHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceee
Q 005798 162 LYSGPP-SEPNSKLIHTYIRAK-HQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 239 (676)
Q Consensus 162 Vy~~dP-~~~~a~~i~~i~~~e-~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT 239 (676)
||++|| ++|++++|+++++.+ ....+..++.+.+++|||.+|++||..|.+.|++++|+|++.|+.|.++++|+..||
T Consensus 170 Vy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~~~gtGGM~~Kl~Aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT 249 (363)
T TIGR01027 170 LYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGSSVGTGGMRTKLQAADLATRAGVPVIIASGSKPEKIADALEGAPVGT 249 (363)
T ss_pred ccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCcCcCcCCchHHHHHHHHHHHCCCeEEEEeCCCccHHHHHhcCCCCcE
Confidence 999999 599999999998643 333455444456899999999999999999999999999999999999999998999
Q ss_pred EEecC
Q 005798 240 LFHRD 244 (676)
Q Consensus 240 ~i~~~ 244 (676)
++.+.
T Consensus 250 ~i~~~ 254 (363)
T TIGR01027 250 LFHAQ 254 (363)
T ss_pred EEeeC
Confidence 99876
No 140
>PTZ00489 glutamate 5-kinase; Provisional
Probab=100.00 E-value=2.5e-35 Score=301.10 Aligned_cols=221 Identities=33% Similarity=0.523 Sum_probs=190.5
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++|++ +++||||||||.+.|...+++... .+. .+++++++||+.++.+|...|..+|+.+.|
T Consensus 34 l~~~i~~l~~-~~~vilVssGava~g~~~~~~~~~------~~~------~~qa~aaiGq~~L~~~y~~~f~~~~~~~aq 100 (264)
T PTZ00489 34 LCRFIADLQT-KYEVILVTSGAVAAGYTKKEMDKS------YVP------NKQALASMGQPLLMHMYYTELQKHGILCAQ 100 (264)
T ss_pred HHHHHHHHhc-CCeEEEEecChHhcChhhcCCCcc------ccH------HHHHHHHhCHHHHHHHHHHHHHhCCCeEEE
Confidence 6788999986 799999999998888776665431 122 257999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+++|..||.++.++.|..+.++.||+.|+|||+++||.+... +..|+|||++|+.+|..++||.|+|+|||||
T Consensus 101 iLlt~~d~~~~~~~~n~~~~l~~lL~~g~VPIinend~~~~~-------e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdG 173 (264)
T PTZ00489 101 MLLAAYDLDSRKRTINAHNTIEVLISHKVIPIINENDATALH-------ELVFGDNDRLSALVAHHFKADLLVILSDIDG 173 (264)
T ss_pred eeeeccccccchhhHHHHHHHHHHHHCCCEEEECCCCCcccc-------eeEeCChHHHHHHHHHHhCCCEEEEeeccCe
Confidence 999999999888998989999999999999999999988763 3456899999999999999999999999999
Q ss_pred cccCCC-CCCCCce---eceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCC--
Q 005798 162 LYSGPP-SEPNSKL---IHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK-- 235 (676)
Q Consensus 162 Vy~~dP-~~~~a~~---i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~-- 235 (676)
||++|| ++|++++ |++++.++... ..++++.+++|||.+|+++|..|.+.|++++|+||+.++.|.+++.|+
T Consensus 174 Vy~~dP~~~~~A~~~~~i~~i~~~~~~~--~~~~~~~~~tGGM~~Kl~aa~~a~~~Gi~v~I~~g~~~~~i~~~l~g~~~ 251 (264)
T PTZ00489 174 YYTENPRTSTDAKIRSVVHELSPDDLVA--EATPNNRFATGGIVTKLQAAQFLLERGGKMYLSSGFHLEKARDFLIGGSH 251 (264)
T ss_pred eEcCCCCCCCccceeeeeccCCHHHHHH--hcCcCCCcccCChHHHHHHHHHHHHCCCCEEEEeCCCchHHHHHHcCCCC
Confidence 999999 5889988 56677665532 223345689999999999999999999999999999999999999775
Q ss_pred ceeeEEecC
Q 005798 236 RVGTLFHRD 244 (676)
Q Consensus 236 ~iGT~i~~~ 244 (676)
..||++.+.
T Consensus 252 ~~GT~~~~~ 260 (264)
T PTZ00489 252 EIGTLFYPR 260 (264)
T ss_pred CCceEEeec
Confidence 479999754
No 141
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=100.00 E-value=3.4e-35 Score=301.25 Aligned_cols=223 Identities=48% Similarity=0.673 Sum_probs=192.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++++.+|+++||||||+...|...+++..++ ..++. .++++++||..++.+|...|.++|+++.|
T Consensus 26 ~~~~i~~~~~~~~~viiV~sg~~~~g~~~~~~~~~~----~~~~~------~~~~~~~Gq~~l~~~~~~~l~~~Gi~~~q 95 (251)
T cd04242 26 LVEQIAELRNQGKEVILVSSGAVAAGRQRLGLEKRP----KTLPE------KQALAAVGQSLLMALYEQLFAQYGIKVAQ 95 (251)
T ss_pred HHHHHHHHHHCCCeEEEEecCchhhChhhhccCcCC----CchhH------HHHHHHHhHHHHHHHHHHHHHHcCCeEEE
Confidence 578999999999999999999877776666654321 12222 46999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+++|+++|.+...+.+..+.|+.||+.|+|||+++||.+++. +..++|+|++|+.+|.+|+||+|+|+|||||
T Consensus 96 ~l~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~~~d~v~~~-------~~~~~~~D~~A~~lA~~l~Ad~liilTDVdG 168 (251)
T cd04242 96 ILLTRDDFEDRKRYLNARNTLETLLELGVIPIINENDTVATE-------EIRFGDNDRLSALVAGLVNADLLILLSDVDG 168 (251)
T ss_pred EEEehhHhcchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeee-------ccccCChHHHHHHHHHHcCCCEEEEecCcCE
Confidence 999999997766677767899999999999999999999873 3457999999999999999999999999999
Q ss_pred cccCCCC-CCCCceeceee--hhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCcee
Q 005798 162 LYSGPPS-EPNSKLIHTYI--RAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVG 238 (676)
Q Consensus 162 Vy~~dP~-~~~a~~i~~i~--~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iG 238 (676)
||++||+ +|++++|++++ ++|+.++. .++.+.+++|||.+|++++..+.++|++++|+||+.|+.|.++++|+..|
T Consensus 169 vy~~dP~~~~~a~~i~~i~~~~~e~~~~~-~~~~~~~~tggm~~Kl~a~~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~G 247 (251)
T cd04242 169 LYDKNPRENPDAKLIPEVEEITDEIEAMA-GGSGSSVGTGGMRTKLKAARIATEAGIPVVIANGRKPDVLLDILAGEAVG 247 (251)
T ss_pred EEeCCCCCCCCCeEEEEecCChHHHHHHh-cccCcCcccCCcHHHHHHHHHHHHCCCcEEEEcCCCCCHHHHHHcCCCCC
Confidence 9999995 78999999999 78777532 33345689999999999999999999999999999999999999999899
Q ss_pred eEEe
Q 005798 239 TLFH 242 (676)
Q Consensus 239 T~i~ 242 (676)
|.+.
T Consensus 248 T~i~ 251 (251)
T cd04242 248 TLFL 251 (251)
T ss_pred eEeC
Confidence 9873
No 142
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=316.74 Aligned_cols=225 Identities=44% Similarity=0.666 Sum_probs=197.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++++++|+++||||||+...++..+++..++ ..+.. .++++++||..++..|...|..+|++..|
T Consensus 35 la~~I~~l~~~g~~vViV~sGai~~g~~~l~l~~~~----~~~~~------~qa~aavGq~~L~~~~~~~l~~~gi~~~q 104 (372)
T PRK05429 35 LARQIAALRAAGHEVVLVSSGAVAAGRERLGLPERP----KTLAE------KQAAAAVGQSRLMQAYEELFARYGITVAQ 104 (372)
T ss_pred HHHHHHHHHHCCCeEEEEcccHhhhhHhhcCCCCCC----CchHH------HHHHHHHhHHHHHHHHHHHHHHCCCCEEE
Confidence 688999999999999999999887777777776532 22322 46999999999999999999999999999
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
+++|++||..+.++.|..++|..||+.|+|||+++||.++.. +..++|+|++|+++|.+|+||.|+|+|||||
T Consensus 105 il~t~~d~~~~~~~ln~~~~i~~Ll~~g~IPVi~~nd~v~~~-------~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdG 177 (372)
T PRK05429 105 ILLTRDDLEDRERYLNARNTLRTLLELGVVPIINENDTVATD-------EIKFGDNDTLSALVANLVEADLLILLTDVDG 177 (372)
T ss_pred EEeehhHhhhhhHhhhHHHHHHHHHHCCCEEEEcCCCcccee-------cccccChHHHHHHHHHHcCCCEEEEecCCCe
Confidence 999999998777788878999999999999999999998863 3457999999999999999999999999999
Q ss_pred cccCCCC-CCCCceeceeeh--hchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCcee
Q 005798 162 LYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVG 238 (676)
Q Consensus 162 Vy~~dP~-~~~a~~i~~i~~--~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iG 238 (676)
||++||+ +|++++|+++++ +|+.+ +..++.+.+++|||.+|+++|..|.++|++++|+||+.++.+.+++.|+..|
T Consensus 178 Vy~~dP~~~p~a~~I~~i~~~~~e~~~-~~~~~~~~~gtGGM~~Kl~aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~G 256 (372)
T PRK05429 178 LYTADPRKNPDAKLIPEVEEITDELEA-MAGGAGSGLGTGGMATKLEAARIATRAGIPVVIASGREPDVLLRLLAGEAVG 256 (372)
T ss_pred eEcCCCCCCCCceEEEEeccCCHHHHH-HhcCCCCCcCcCCcHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHhcCCCCC
Confidence 9999994 799999999987 45554 3344445689999999999999999999999999999999999999999899
Q ss_pred eEEecC
Q 005798 239 TLFHRD 244 (676)
Q Consensus 239 T~i~~~ 244 (676)
|++.+.
T Consensus 257 T~i~~~ 262 (372)
T PRK05429 257 TLFLPQ 262 (372)
T ss_pred EEEeeC
Confidence 999876
No 143
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=99.97 E-value=1.1e-30 Score=271.73 Aligned_cols=217 Identities=23% Similarity=0.338 Sum_probs=175.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhh----hCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFS----QLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~----~~g~ 77 (676)
++++|+.|+++|++|||||||||++|...++...... .+.. ..++++.|+||+.++..|++.|+ .+|+
T Consensus 31 ~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~~----~~~~----~p~~~~~A~~qg~lg~~~~~~l~~~l~~~g~ 102 (310)
T TIGR00746 31 TAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAADS----EVPA----MPLDVLGAMSQGMIGYMLQQALNNELPKRGM 102 (310)
T ss_pred HHHHHHHHHHCCCEEEEEECChHHHHHHHhccccccc----cCCC----CcchHHHHhhHHHHHHHHHHHHHHHHHhcCC
Confidence 6899999999999999999999999998887655432 1111 12469999999998888888877 7774
Q ss_pred ------ccceEEecccc--cCchhHh----------------------------------------hhHHHHHHHHHhCC
Q 005798 78 ------TSSQLLVTDSD--FRDEDFR----------------------------------------KQLYDTVQSLLDLR 109 (676)
Q Consensus 78 ------~~~q~l~~~~d--~~~~~~~----------------------------------------~~~~~~i~~ll~~g 109 (676)
..+|++++.+| |.++.++ ++..++|+.||+.|
T Consensus 103 ~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~~~d~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G 182 (310)
T TIGR00746 103 EKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIVKEDAGRGWRRVVPSPRPKDIVEAETIKTLVENG 182 (310)
T ss_pred CccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeEeecCCCcceEeecCCCchhhccHHHHHHHHHCC
Confidence 35688999888 7666554 23368999999999
Q ss_pred C---------eeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeeh
Q 005798 110 V---------IPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR 180 (676)
Q Consensus 110 ~---------iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~ 180 (676)
. |||+++||.+...+ .++|+|++|+++|.+|+||+|+|+|||||||++ |.+|++++|+++++
T Consensus 183 ~iVI~~ggggiPvi~e~~~~~g~e--------~~id~D~lAa~lA~~l~AD~LIiLTDVdGVy~~-~~~p~a~~i~~it~ 253 (310)
T TIGR00746 183 VIVISSGGGGVPVVLEGAELKGVE--------AVIDKDLASEKLAEEVNADILVILTDVDAVYIN-YGKPDEKALREVTV 253 (310)
T ss_pred CEEEeCCCCCcCEEecCCeEEeeE--------ecCCHHHHHHHHHHHhCCCEEEEEeCCCceeCC-CCCCCCcCCcCcCH
Confidence 9 66666655554321 259999999999999999999999999999997 45789999999999
Q ss_pred hchHHHHhcCCCCcccccchHHHHHHHHHHHHcC-CcEEEEeCCCcchHHHHHhCCceeeEEe
Q 005798 181 AKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLFH 242 (676)
Q Consensus 181 ~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~g-v~v~I~~g~~~~~i~~~~tg~~iGT~i~ 242 (676)
+|+.+++.. +.+++|||.+|+++|..+++.| .+++|+| ++.+.+++.|+ .||++.
T Consensus 254 ~e~~~~~~~---g~~~tGgM~~Kl~AA~~~~~~g~~~v~I~~---~~~i~~~l~G~-~GT~I~ 309 (310)
T TIGR00746 254 EELEDYYKA---GHFAAGSMGPKVEAAIEFVESGGKRAIITS---LENAVEALEGK-AGTRVT 309 (310)
T ss_pred HHHHHHHhc---CCcCCCCcHHHHHHHHHHHHhCCCeEEEec---hHHHHHHHCCC-CCcEEe
Confidence 988865532 4588999999999999988875 5699997 77889999999 899885
No 144
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.97 E-value=2.1e-30 Score=284.64 Aligned_cols=318 Identities=14% Similarity=0.089 Sum_probs=234.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHH---HHHHHHHHhhchhHHHHHHhhcChHHHHHHH
Q 005798 253 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVEN---EADVAAAQEAGYAKSLVSRLALKPGKISSLA 329 (676)
Q Consensus 253 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~---~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 329 (676)
-++++++..+++++.|..-+...|...++++...+..+.+.+.+++ ..++.+ ..+...+
T Consensus 25 ~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r------------------~~l~~~l 86 (422)
T cd07080 25 PVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRR------------------ENLERIL 86 (422)
T ss_pred CHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCH------------------HHHHHHH
Confidence 4677888889999999999999999999999999998888877763 222211 1111111
Q ss_pred HHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCCC-hhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005798 330 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PDALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 408 (676)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 408 (676)
.. .+. ..+ .+..|. +.+...+++++|+|||+.|+||| |.+.++++++||++||++|+|||+.+|.++..++
T Consensus 87 ~~--el~-~~~----~Ld~w~-~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~ 158 (422)
T cd07080 87 ER--ELG-SPG----ILDEWV-PPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALL 158 (422)
T ss_pred HH--hcC-Ccc----cccCCc-cCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence 11 010 000 111111 11234467899999999999985 8888899999999999999999999999999999
Q ss_pred HHHHHhcccccCc----CceEEec--C-CChhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEeecCCc-ceEEEc
Q 005798 409 KVITSAIPDTVGE----KLIGLVT--S-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVD 479 (676)
Q Consensus 409 ~l~~~al~~alP~----gv~~~v~--~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGGk-~p~iV~ 479 (676)
+++.+ ++|+ +.++++. | .+++++.|..++ |+|+||||+++|+.|++.+. .+.++|+||| +++|++
T Consensus 159 ~~l~~----~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 159 RSLAD----VDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHh----cCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEec
Confidence 99986 4887 8899984 4 444777777775 99999999999999998875 5789999999 556666
Q ss_pred CCC----CHHHHHHHHHHhcCCCCc-cccccceEEEeCcc---CChhHHHHHHHHHHhcCcEEecCc-cc----------
Q 005798 480 KSA----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL---ACNGALNELVVELQHEGVGLFGGP-RA---------- 540 (676)
Q Consensus 480 ~dA----Dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i---~d~~f~~~l~~~~~~~~~~~~g~~-~~---------- 540 (676)
++| |++++++.+++++|.|+| .|+|++++|||+++ + ++|+++|.++++++....-.+. ..
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~-~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r 311 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEEL-REFAEALAAALERLPRRYPALSLSAAESAKIARAR 311 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchH-HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 668 999999999999999888 99999999999999 9 7999999999887632111000 00
Q ss_pred --------ccc-c-c----C--CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCe
Q 005798 541 --------SKL-L-Q----I--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 604 (676)
Q Consensus 541 --------~~~-~-p----v--~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~ 604 (676)
... . . | .+..-...-.++=.+.|.++++++|++..++. |=-|.++|..+.+. .++++++-.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~ 388 (422)
T cd07080 312 LEAEFYELKGGVSRDLGWTVIISDEIGLEASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAA 388 (422)
T ss_pred HHHHHHHHhcCCCCCCCeEEEEeCCCCccCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHH
Confidence 000 0 0 1 11101111233447788999999999999985 77799999999887 677777654
Q ss_pred ee
Q 005798 605 AA 606 (676)
Q Consensus 605 G~ 606 (676)
-.
T Consensus 389 ~G 390 (422)
T cd07080 389 AG 390 (422)
T ss_pred cC
Confidence 43
No 145
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.8e-30 Score=260.44 Aligned_cols=220 Identities=25% Similarity=0.333 Sum_probs=175.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCcccc-chhhHHHhccHHHHHHHHHHHhhhCCC-
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNE-LDGKACAAVGQSSLMALYDTLFSQLDV- 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~-l~~~~~~avG~~~~~~~~~~~l~~~g~- 77 (676)
|+++|+.|+..|.++||||||||+++. +.+++++... ..+|+|+.+ ++...++..|+... .+...|..+|.
T Consensus 23 ~~~di~lL~~~G~~~VvVHGggp~I~~~l~~~gie~~f~---~glRvTd~~tlevv~mvl~G~vNk--~iva~l~~~g~~ 97 (265)
T COG0548 23 FASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEFV---KGLRVTDAETLEVVEMVLGGTVNK--EIVARLSKHGGQ 97 (265)
T ss_pred HHHHHHHHHHCCCcEEEEeCCchHHHHHHHHcCCCCeee---CCEEcCCHHHHHHHHHHHHHHHHH--HHHHHHHHhCCc
Confidence 789999999999999999999999986 5777777432 459998853 44344444445431 22233444443
Q ss_pred ----ccc--eEEe---------cccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhHHH
Q 005798 78 ----TSS--QLLV---------TDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLA 141 (676)
Q Consensus 78 ----~~~--q~l~---------~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~~A 141 (676)
++. +++. .+..|++..+.+| .+.|+.++++|+|||++| ++.++ +|..| +|+|++|
T Consensus 98 avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn-~~~i~~ll~~~~IpViap---ia~~~-----~G~~~NvnaD~~A 168 (265)
T COG0548 98 AVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVN-PELIERLLDNGAIPVIAP---IAVDE-----DGETLNVNADTAA 168 (265)
T ss_pred ceeeeecCCCEEEEEEcccccccccceeeeEEEEC-HHHHHHHHhCCCceEEec---ceECC-----CCcEEeeCHHHHH
Confidence 322 1211 1134778888889 899999999999999998 55543 67777 9999999
Q ss_pred HHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-EEEE
Q 005798 142 GLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVIT 220 (676)
Q Consensus 142 ~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I~ 220 (676)
+.+|.+|+|++|+++|||+|||+++| +| .+|++++.+|+++++.++ .++|||+||+++|..|++.|++ |||+
T Consensus 169 ~~iA~aLkAekLi~ltdv~Gvl~~~~-~~--s~i~~~~~~~~~~li~~~----~i~~GMi~Kv~~a~~A~~~Gv~~v~ii 241 (265)
T COG0548 169 GALAAALKAEKLILLTDVPGVLDDKG-DP--SLISELDAEEAEELIEQG----IITGGMIPKVEAALEALESGVRRVHII 241 (265)
T ss_pred HHHHHHcCCCeEEEEeCCcccccCCC-Cc--eeeccCCHHHHHHHHhcC----CccCccHHHHHHHHHHHHhCCCeEEEe
Confidence 99999999999999999999999864 33 699999999999888754 7899999999999999999997 9999
Q ss_pred eCCCcchH-HHHHhCCceeeEEe
Q 005798 221 SGFAMDSI-IKVLEGKRVGTLFH 242 (676)
Q Consensus 221 ~g~~~~~i-~~~~tg~~iGT~i~ 242 (676)
||+.++.+ .+++++..+||.+.
T Consensus 242 ~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 242 SGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred cCCCcchHHHHHhcCCCcceEec
Confidence 99999997 88999999999875
No 146
>PRK12353 putative amino acid kinase; Reviewed
Probab=99.96 E-value=5.4e-28 Score=253.76 Aligned_cols=225 Identities=22% Similarity=0.309 Sum_probs=170.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHH----HHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSS----LMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~----~~~~~~~~l~~~g~ 77 (676)
++++|++|++.|++||||||||+++|+..++...... ..+ +.++ +..+.++++||.. ++..|+..|..+|+
T Consensus 31 la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~~~--~~~-~~~~--~~~~~~~a~~qg~l~~~l~~~~~~~l~~~~~ 105 (314)
T PRK12353 31 TAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAAAS--EKN-KVPA--MPLDVCGAMSQGYIGYHLQNALRNELLKRGI 105 (314)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccccc--cCC-CCCC--chhHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Confidence 7899999999999999999999999997776544321 001 1111 2345777888874 55689999999998
Q ss_pred ------ccceEEecccccC--chh-----------------------------Hhhh-----------HHHHHHHHHhCC
Q 005798 78 ------TSSQLLVTDSDFR--DED-----------------------------FRKQ-----------LYDTVQSLLDLR 109 (676)
Q Consensus 78 ------~~~q~l~~~~d~~--~~~-----------------------------~~~~-----------~~~~i~~ll~~g 109 (676)
...|++++.+|+. .+. .+.| ..+.|+.||++|
T Consensus 106 ~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g 185 (314)
T PRK12353 106 DKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKEDAGRGYRRVVPSPKPVDIVEIEAIKTLVDAG 185 (314)
T ss_pred CcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeecCCceeEeccCCCCccccccHHHHHHHHHCC
Confidence 5668888887732 211 1212 168999999999
Q ss_pred CeeEEcCCCceecCCCCCCCCC----ceecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHH
Q 005798 110 VIPIFNENDAVSTRKAPYEDSS----GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQA 185 (676)
Q Consensus 110 ~iPVi~~~d~v~~~~~~~~~~~----~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~ 185 (676)
+|||++|...+.... +++. ..++|+|++|+++|.+|+||+|+|+|||||||++|| +|++++|++++++++.+
T Consensus 186 ~IpV~~g~gg~Pi~~---~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lTdvdGVy~~~~-~~~a~~i~~i~~~e~~~ 261 (314)
T PRK12353 186 QVVIAAGGGGIPVIR---EGGGLKGVEAVIDKDFASAKLAELVDADLLIILTAVDKVYINFG-KPNQKKLDEVTVSEAEK 261 (314)
T ss_pred CEEEEcCCCCCCEEE---eCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEeCCccccCCCC-CCCCeECcCcCHHHHHH
Confidence 999999732121110 0011 125999999999999999999999999999999766 68899999999988776
Q ss_pred HHhcCCCCcccccchHHHHHHHHHHH--HcCCcEEEEeCCCcchHHHHHhCCceeeEEe
Q 005798 186 EITFGDKSRVGRGGMTAKVNAAYCAA--CAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 242 (676)
Q Consensus 186 ~~~~g~~~~~~~ggM~~K~~aa~~a~--~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~ 242 (676)
++.. +.+++|||.+|+++|..++ +.|++|+|+| ++.+.+++.|+ .||++.
T Consensus 262 ~~~~---~~~~tGGM~~Kl~aA~~a~~~~~g~~v~I~~---~~~i~~~l~g~-~GT~i~ 313 (314)
T PRK12353 262 YIEE---GQFAPGSMLPKVEAAISFVESRPGRKAIITS---LEKAKEALEGK-AGTVIV 313 (314)
T ss_pred HHhc---CCcCCCCcHHHHHHHHHHHHHcCCCEEEECC---chHHHHHhCCC-CCeEec
Confidence 5543 3477999999999999988 5688999997 77888888888 899885
No 147
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=1.3e-27 Score=245.66 Aligned_cols=215 Identities=23% Similarity=0.309 Sum_probs=158.1
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--Hhccccc--ccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRK--LVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~--~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~ 77 (676)
++++|++++ |+++|||||||++... ..++++. +.+ +...++.++ .+ +..+...+.+.|..+|+
T Consensus 28 l~~~l~~l~--g~~vvlVhGgg~~~~~~~~~~g~~~g~~~~-~~~~l~~~~--------~~--~~~ln~~~~~~l~~~g~ 94 (252)
T cd04241 28 IARELAEAI--DEKLVLVHGGGSFGHPKAKEYGLPDGDGSF-SAEGVAETH--------EA--MLELNSIVVDALLEAGV 94 (252)
T ss_pred HHHHHHhcc--CCCEEEEECCCcccCHHHHHhCCCcCCCch-hhhhHHHHH--------HH--HHHHHHHHHHHHHHCCC
Confidence 345555554 9999999999975432 3455543 110 111222211 11 12455567788888887
Q ss_pred ccc-----eEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCe
Q 005798 78 TSS-----QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADL 152 (676)
Q Consensus 78 ~~~-----q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~ 152 (676)
+.. +++.+. .+..+..+ .+.++.+|+.|+|||+++ |.+...+ .+..++|+|++|+.+|.+|+||+
T Consensus 95 ~a~~l~~~~~~~~~---~g~~~~~~-~~~l~~ll~~g~iPVi~~-~~~~~~~-----~~~~~~~~D~~A~~lA~~l~A~~ 164 (252)
T cd04241 95 PAVSVPPSSFFVTE---NGRIVSFD-LEVIKELLDRGFVPVLHG-DVVLDEG-----GGITILSGDDIVVELAKALKPER 164 (252)
T ss_pred CeEEEChHHeEEec---CCeeeeec-HHHHHHHHhCCCEEEEcC-CeEecCC-----CCeEEeChHHHHHHHHHHcCCCE
Confidence 643 444432 22333444 789999999999999997 5544321 22345999999999999999999
Q ss_pred EeeccccCccccCCCCCCCCceeceeehhchHHHHhc-CCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHH
Q 005798 153 LVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 231 (676)
Q Consensus 153 li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~-g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~ 231 (676)
|+|+|||||||++|| |++++|++++++++.+++.. ++++.+++|||.+|+++|..++++|++++|+||+.++.+.++
T Consensus 165 li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~~~~~~~~~~~~tGGm~~Kl~aa~~a~~~Gv~v~I~~g~~~~~l~~~ 242 (252)
T cd04241 165 VIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDILAALGSAGTDVTGGMAGKIEELLELARRGIEVYIFNGDKPENLYRA 242 (252)
T ss_pred EEEEeCCCeeECCCC--CCCeEcceeCccchHHHHHhcCcCCccccCCHHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHH
Confidence 999999999999999 88999999999887765542 222457899999999999999999999999999999999999
Q ss_pred HhCCceeeEE
Q 005798 232 LEGKRVGTLF 241 (676)
Q Consensus 232 ~tg~~iGT~i 241 (676)
++|+..||.+
T Consensus 243 l~g~~~GT~i 252 (252)
T cd04241 243 LLGNFIGTRI 252 (252)
T ss_pred HcCCCCceEC
Confidence 9999899974
No 148
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=99.95 E-value=4.3e-27 Score=244.86 Aligned_cols=221 Identities=20% Similarity=0.313 Sum_probs=166.5
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCcccc-chhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNE-LDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~-l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
|+++|+.|+..|.++|||||||+++.. +.++++++. ...+|.|+.+ ++.-.....|... ..+...|.+.|++
T Consensus 44 ~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~---~~G~rvT~~~~l~~~~~~l~g~ln--~~lv~~L~~~Gv~ 118 (284)
T CHL00202 44 IIKDILFLSCIGLKIVVVHGGGPEINFWLKQLNISPKF---WNGIRVTDKVTMEIVEMVLAGKVN--KDLVGSINANGGK 118 (284)
T ss_pred HHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHCCCCCEe---ECCcccCCHHHHHHHHHHHhhHHH--HHHHHHHHhCCCC
Confidence 789999999999999999999998875 456666532 1457887732 2222222334332 2334566667765
Q ss_pred cceE------Eecc-------cccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhHHHHHH
Q 005798 79 SSQL------LVTD-------SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLL 144 (676)
Q Consensus 79 ~~q~------l~~~-------~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~~A~~l 144 (676)
+..+ +++. ..+.+..+.++ .+.|+.+|+.|+|||+++ ++.++ .|..+ +|+|++|+.+
T Consensus 119 av~l~~~d~~~i~a~~~~~~d~~~~G~i~~v~-~~~i~~ll~~g~iPVi~~---~~~~~-----~g~~~ni~~D~~A~~l 189 (284)
T CHL00202 119 AVGLCGKDANLIVARASDKKDLGLVGEIQQVD-PQLIDMLLEKNYIPVIAS---VAADH-----DGQTYNINADVVAGEI 189 (284)
T ss_pred eeeeeeccCCEEEEEeCCCcccccceeEEecC-HHHHHHHHHCCCEEEECC---CccCC-----CCcEEecCHHHHHHHH
Confidence 3322 2221 12455666677 799999999999999996 44332 44455 8999999999
Q ss_pred HHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-EEEEeCC
Q 005798 145 ALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGF 223 (676)
Q Consensus 145 A~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I~~g~ 223 (676)
|.+|+||+|+|+|||||||+++ .+| +++|++++++|+.+++..+ +++|||.+|+++|..|+++|++ ++|+||+
T Consensus 190 A~~l~Ad~li~lTdv~Gv~~~~-~d~-~~~i~~i~~~e~~~l~~~g----~~tGGM~~Kl~aa~~a~~~Gv~~v~I~~g~ 263 (284)
T CHL00202 190 AAKLNAEKLILLTDTPGILADI-NDP-NSLISTLNIKEARNLASTG----IISGGMIPKVNCCIRALAQGVEAAHIIDGK 263 (284)
T ss_pred HHHhCCCEEEEEeCChhhcCCC-CCC-CCccccccHHHHHHHHhcC----CCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 9999999999999999999853 234 4799999999888765432 7899999999999999999998 9999999
Q ss_pred CcchH-HHHHhCCceeeEEe
Q 005798 224 AMDSI-IKVLEGKRVGTLFH 242 (676)
Q Consensus 224 ~~~~i-~~~~tg~~iGT~i~ 242 (676)
.++.+ .++++++..||.+.
T Consensus 264 ~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 264 EKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred CCChHHHHHhcCCCCceEEe
Confidence 99975 99999999999874
No 149
>PRK12686 carbamate kinase; Reviewed
Probab=99.95 E-value=3.5e-27 Score=244.01 Aligned_cols=225 Identities=22% Similarity=0.285 Sum_probs=163.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHH--HHHHHHHHhhhCCCc-
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSS--LMALYDTLFSQLDVT- 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~--~~~~~~~~l~~~g~~- 78 (676)
++++|+.|.+.|+++|||||||||+|+..+....... .+ .. ...|..+.+.+.|..+ +...+.+.|.++++.
T Consensus 31 ~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~~~-~~--~~--~~pl~~~~a~sqg~iGy~~~q~l~~~l~~r~~~~ 105 (312)
T PRK12686 31 AAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAESNS-NK--VP--AMPLDTCVAMSQGMIGYWLQNALNNELTERGIDK 105 (312)
T ss_pred HHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhccc-cC--CC--CCChhhhhhhccchhhHHHHHHHHHHHHhcCCCC
Confidence 6899999999999999999999999975553221110 00 00 1123456677777776 346788888887753
Q ss_pred -----cceEEecccc--cCch-----------------------------------------hHhhhHHHHHHHHHhCCC
Q 005798 79 -----SSQLLVTDSD--FRDE-----------------------------------------DFRKQLYDTVQSLLDLRV 110 (676)
Q Consensus 79 -----~~q~l~~~~d--~~~~-----------------------------------------~~~~~~~~~i~~ll~~g~ 110 (676)
.+|+++..+| |.++ .+.++ .++|+.||++|+
T Consensus 106 ~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~~~d~~~G~rrvV~sP~P~~ive-~~~I~~Ll~~G~ 184 (312)
T PRK12686 106 PVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTFKEDAGRGYRRVVPSPKPQEIIE-HDTIRTLVDGGN 184 (312)
T ss_pred CceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcccccCCCCeEEeeCCCCCccccC-HHHHHHHHHCCC
Confidence 3466766554 2221 01133 789999999999
Q ss_pred eeEEcCCCceecCCCCCCCC--Cc-eecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHH
Q 005798 111 IPIFNENDAVSTRKAPYEDS--SG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEI 187 (676)
Q Consensus 111 iPVi~~~d~v~~~~~~~~~~--~~-~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~ 187 (676)
|||.++...+... ...+. +. .++|+|++|++||.+|+||+|+|+|||||||++ |.+|++++|++++.+|+.+++
T Consensus 185 IpI~~GgggIPVv--~~~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIiLTDVdGVy~~-~~~p~ak~I~~I~~~e~~~li 261 (312)
T PRK12686 185 IVIACGGGGIPVI--RDDNTLKGVEAVIDKDFASEKLAEQIDADLLIILTGVENVFIN-FNKPNQQKLDDITVAEAKQYI 261 (312)
T ss_pred EEEEeCCCCCCeE--ecCCcEEeeecccCccHHHHHHHHHcCCCEEEEEeCchhhccC-CCCCCCeECCccCHHHHHHHh
Confidence 9987753222110 00011 22 258999999999999999999999999999996 556889999999999988766
Q ss_pred hcCCCCcccccchHHHHHHHHHHHHc--CCcEEEEeCCCcchHHHHHhCCceeeEEe
Q 005798 188 TFGDKSRVGRGGMTAKVNAAYCAACA--GIPVVITSGFAMDSIIKVLEGKRVGTLFH 242 (676)
Q Consensus 188 ~~g~~~~~~~ggM~~K~~aa~~a~~~--gv~v~I~~g~~~~~i~~~~tg~~iGT~i~ 242 (676)
.. +.+.+|||.||+++|..+.+. |.+++|++ ++.+.+++.|+ .||++.
T Consensus 262 ~~---g~~~tGGM~pKveAA~~av~~g~g~~viI~~---~~~i~~aL~G~-~GT~I~ 311 (312)
T PRK12686 262 AE---GQFAPGSMLPKVEAAIDFVESGEGKKAIITS---LEQAKEALAGN-AGTHIT 311 (312)
T ss_pred hC---CCccCCCcHHHHHHHHHHHHhCCCCEEEEeC---chHHHHHhCCC-CCeEEe
Confidence 54 347789999999999999986 45688887 67788888887 799875
No 150
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=99.95 E-value=9.4e-27 Score=240.83 Aligned_cols=221 Identities=26% Similarity=0.296 Sum_probs=161.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--Hhccccccccccccc--ccCccccchhhHHHhccHHHHHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLAD--LQKPQNELDGKACAAVGQSSLMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~--l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~ 77 (676)
++++|+.|+..|.++|||||||+++.. +.++++.+....+.. +|.|+.+--.....++|+ +...+...|.+.|+
T Consensus 17 ~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~g~~~rvt~~~~l~~~~~a~~~--ln~~lv~~L~~~Gv 94 (268)
T PRK14058 17 ALIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSGVTSRYTDRETLEVFIMAMAL--INKQLVERLQSLGV 94 (268)
T ss_pred HHHHHHHHHHCCCCEEEEeCCHHHHHHHHHHcCCCceEEeCCCCCceEeCCHHHHHHHHHHHHH--HHHHHHHHHHhCCC
Confidence 678999999999999999999998876 455665532100012 555553211122344442 22223346666665
Q ss_pred c-----cceE-Ee------------------cccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCce
Q 005798 78 T-----SSQL-LV------------------TDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 133 (676)
Q Consensus 78 ~-----~~q~-l~------------------~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~ 133 (676)
+ +.+. ++ ++..|.+..+..+ .+.|+.+|+.|+|||+++ ..+. + .|..
T Consensus 95 ~a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~-~~~i~~ll~~g~iPVi~~-~~~~--~-----~g~~ 165 (268)
T PRK14058 95 NAVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVN-TDLLKLLLKAGYLPVVAP-PALS--E-----EGEP 165 (268)
T ss_pred CccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEEC-HHHHHHHHHCCCEEEEeC-ceEC--C-----CCcE
Confidence 4 3222 22 1223555666666 789999999999999997 2222 1 3334
Q ss_pred -ecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHH
Q 005798 134 -FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 212 (676)
Q Consensus 134 -~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~ 212 (676)
++|+|++|+.+|.+|+||+|+|+|||||||++||. ++++|++|+++|+.+++. +++|||.+|+++|..+.+
T Consensus 166 ~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~l~~------~~tGgM~~Kl~aa~~a~~ 237 (268)
T PRK14058 166 LNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPD--EGSLIERITPEEAEELSK------AAGGGMKKKVLMAAEAVE 237 (268)
T ss_pred EecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCC--CCcCccCcCHHHHHHHhh------ccCCccHHHHHHHHHHHH
Confidence 49999999999999999999999999999999883 468999999988876443 579999999999999999
Q ss_pred cCC-cEEEEeCCCcchHHHHHhCCceeeEEec
Q 005798 213 AGI-PVVITSGFAMDSIIKVLEGKRVGTLFHR 243 (676)
Q Consensus 213 ~gv-~v~I~~g~~~~~i~~~~tg~~iGT~i~~ 243 (676)
+|+ +++|+||+.++++...+.|+ ||.+..
T Consensus 238 ~Gv~~v~I~~g~~~~~l~~~l~G~--GT~I~~ 267 (268)
T PRK14058 238 GGVGRVIIADANVDDPISAALAGE--GTVIVN 267 (268)
T ss_pred cCCCEEEEEcCCCcchHHHHhCCC--ceEEec
Confidence 999 49999999999998888775 998864
No 151
>PRK12352 putative carbamate kinase; Reviewed
Probab=99.95 E-value=2.1e-26 Score=240.02 Aligned_cols=227 Identities=18% Similarity=0.193 Sum_probs=164.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhc--ccccccccccccccCccccchhhHHHhccHHH--HHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRL--RYRKLVNSSLADLQKPQNELDGKACAAVGQSS--LMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l--~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~--~~~~~~~~l~~~g~ 77 (676)
++++|+.|++.|+++|||||||||+++.+. ++.+ ++..+|.|+.+ .++..+.|..+ +...+.+.|.++|.
T Consensus 33 ~a~dia~l~~~G~~lVivHG~GPqI~~~l~~~~~~~----~~~g~rvt~~~--~~v~~~~g~i~~~i~~~L~~~l~~~g~ 106 (316)
T PRK12352 33 VADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAH----EREGLPLTPLA--NCVADTQGGIGYLIQQALNNRLARHGE 106 (316)
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHcCccc----ccCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 688999999999999999999999998433 3333 23357777632 34555555333 44667788887773
Q ss_pred cc-----ceEEecc--cccC-------------------------------ch-----------hHhhhHHHHHHHHHhC
Q 005798 78 TS-----SQLLVTD--SDFR-------------------------------DE-----------DFRKQLYDTVQSLLDL 108 (676)
Q Consensus 78 ~~-----~q~l~~~--~d~~-------------------------------~~-----------~~~~~~~~~i~~ll~~ 108 (676)
.. +|+.++. .+|. +. .+.+| .+.|+.||++
T Consensus 107 ~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d~g~G~rrvv~sp~pv~~V~-~~~I~~ll~~ 185 (316)
T PRK12352 107 KKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVEDAGRGYRRVVASPEPKRIVE-APAIKALIQQ 185 (316)
T ss_pred CCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeecCCCCeEEecCCCCCceEEc-HHHHHHHHHC
Confidence 21 2333332 1121 11 44566 7999999999
Q ss_pred CCeeEEcCCCceecCC-CCCCCCCcee-cchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHH
Q 005798 109 RVIPIFNENDAVSTRK-APYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 186 (676)
Q Consensus 109 g~iPVi~~~d~v~~~~-~~~~~~~~~~-~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~ 186 (676)
|+|+|.+|.+.+.... ..++..+..+ +|+|.+|+.+|.+|+||+|+|+|||+|||++++ +|++++|++++.+|+.++
T Consensus 186 g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~LTDV~GV~~d~~-~~~~~li~~lt~~e~~~l 264 (316)
T PRK12352 186 GFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFG-KPQQQALDRVDIATMTRY 264 (316)
T ss_pred CCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEEEeCchhhccCCC-CCCcccccccCHHHHHHH
Confidence 9996665323222210 0001122334 999999999999999999999999999998764 567889999999999887
Q ss_pred HhcCCCCcccccchHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHhCCceeeEEec
Q 005798 187 ITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLFHR 243 (676)
Q Consensus 187 ~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I~~g~~~~~i~~~~tg~~iGT~i~~ 243 (676)
+..| .+..|||.||+++|..|++.|+. +||+| ++.+.++++|+ .||.+..
T Consensus 265 i~~g---~i~~GgM~pKl~aA~~al~~Gv~~v~I~~---~~~i~~al~g~-~GT~I~~ 315 (316)
T PRK12352 265 MQEG---HFPPGSMLPKIIASLTFLEQGGKEVIITT---PECLPAALRGE-TGTHIIK 315 (316)
T ss_pred HhcC---CcCCCCCHHHHHHHHHHHHhCCCeEEEcc---hHHHHHHHcCC-CCeEEEe
Confidence 7643 24478999999999999999986 99997 78899999998 8898864
No 152
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=1.3e-26 Score=240.52 Aligned_cols=220 Identities=21% Similarity=0.276 Sum_probs=164.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCccccchhhHHHhccHHH--HHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSS--LMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~--~~~~~~~~l~~~g~ 77 (676)
++++|+.|++.|+++||||||||++++ ..++++++. ...+|.|+++.......+.|... +.+.+...+.+.++
T Consensus 38 ~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~~gi~~~~---~~G~RvT~~~~l~~~~~~~g~v~~~l~~~l~~~~~a~~~ 114 (280)
T cd04237 38 IVHDIALLHSLGIRLVLVHGARPQIDQRLAERGLEPRY---HRGLRITDAAALECVKEAAGAVRLEIEALLSMGLPNSPM 114 (280)
T ss_pred HHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCccc---cCCcCcCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCc
Confidence 689999999999999999999999997 456666542 13478776543222333345443 33444445555444
Q ss_pred ccceE------Ee-c---------ccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhHH
Q 005798 78 TSSQL------LV-T---------DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSL 140 (676)
Q Consensus 78 ~~~q~------l~-~---------~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~~ 140 (676)
+...+ ++ . +..|.++.+.++ .+.|+.+|++|+|||+++ ++.+. +|..+ +|+|.+
T Consensus 115 ~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~-~~~i~~lL~~g~ipv~~~---~g~~~-----~g~~lnvnaD~~ 185 (280)
T cd04237 115 AGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRID-ADAIRRQLDQGSIVLLSP---LGYSP-----TGEVFNLSMEDV 185 (280)
T ss_pred CCCceEEecCeEEEEEECCcccCceEeeeccEEEEc-HHHHHHHHHCCCEEEECC---ceECC-----CCCEEeeCHHHH
Confidence 32111 11 1 112345556667 899999999999999987 33321 44455 899999
Q ss_pred HHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-EEE
Q 005798 141 AGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVI 219 (676)
Q Consensus 141 A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I 219 (676)
|+.+|.+|+|++|+|+|||||||++ ++++|++++.+|+.+++..+. ..+|||++|+++|..|++.|++ ++|
T Consensus 186 A~~LA~~L~a~klv~ltdv~GV~~~-----~~~~i~~i~~~e~~~l~~~~~---~~~ggM~~Kv~~a~~a~~~Gv~~v~I 257 (280)
T cd04237 186 ATAVAIALKADKLIFLTDGPGLLDD-----DGELIRELTAQEAEALLETGA---LLTNDTARLLQAAIEACRGGVPRVHL 257 (280)
T ss_pred HHHHHHHcCCCEEEEEeCCCcccCC-----CCCccccCCHHHHHHHHHcCC---CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999999999999999999975 378999999999888776541 2489999999999999999996 999
Q ss_pred EeCCCcchH-HHHHhCCceeeEE
Q 005798 220 TSGFAMDSI-IKVLEGKRVGTLF 241 (676)
Q Consensus 220 ~~g~~~~~i-~~~~tg~~iGT~i 241 (676)
+|++.++.+ .++++.+..||.+
T Consensus 258 ~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 258 ISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred eCCCCCCHHHHHHhcCCCCCCcC
Confidence 999999998 7888888889864
No 153
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=99.94 E-value=2e-26 Score=237.70 Aligned_cols=223 Identities=22% Similarity=0.330 Sum_probs=165.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHH--HHHHHHHHhhhCCCc-
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSS--LMALYDTLFSQLDVT- 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~--~~~~~~~~l~~~g~~- 78 (676)
.+++|+.+.+.|+++|||||+|||+|+..++...... .... ...|..+.+.+.|..+ +..++.+.|.++|+.
T Consensus 33 ~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~---~~~~--~~pld~~~a~sqG~igy~l~~al~~~l~~~g~~~ 107 (313)
T PRK12454 33 TAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKD---VGIP--PFPLDVAGAMTQGWIGYMIQQALRNELAKRGIEK 107 (313)
T ss_pred HHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhcc---cCCC--CCccchhhhhhhHHHHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999999986665432110 0000 0113356667777766 456788999998875
Q ss_pred -----cceEEecccc--cCchhH-----------------------------------------hhhHHHHHHHHHhCCC
Q 005798 79 -----SSQLLVTDSD--FRDEDF-----------------------------------------RKQLYDTVQSLLDLRV 110 (676)
Q Consensus 79 -----~~q~l~~~~d--~~~~~~-----------------------------------------~~~~~~~i~~ll~~g~ 110 (676)
.+|+.+..+| |.++.+ .++ .+.|+.||+.|.
T Consensus 108 ~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~~~d~g~g~RrvV~SP~P~~ive-~~aI~~LLe~G~ 186 (313)
T PRK12454 108 QVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKEDAGRGWRRVVPSPDPLGIVE-IEVIKALVENGF 186 (313)
T ss_pred ceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEcCCCceEEEeCCCCCccccC-HHHHHHHHHCCC
Confidence 2366666544 433221 122 689999999999
Q ss_pred eeEEcCCCceecCCCCCCCCCc-----eecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHH
Q 005798 111 IPIFNENDAVSTRKAPYEDSSG-----IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQA 185 (676)
Q Consensus 111 iPVi~~~d~v~~~~~~~~~~~~-----~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~ 185 (676)
|||++|...+.... +++. .++|+|.+|+++|.+|+||+|+|+|||||||++ +++|++++|++++.+|+.+
T Consensus 187 IvI~~GgGGiPV~~----~~g~~~gveaViD~D~aAa~LA~~L~AD~LIiLTdVdGVy~~-~~~p~~~~i~~It~~e~~~ 261 (313)
T PRK12454 187 IVIASGGGGIPVIE----EDGELKGVEAVIDKDLASELLAEELNADIFIILTDVEKVYLN-YGKPDQKPLDKVTVEEAKK 261 (313)
T ss_pred EEEEeCCCccceEc----CCCcEEeeeeecCccHHHHHHHHHcCCCEEEEEeCCceeeCC-CCCCCCeEccccCHHHHHH
Confidence 99999743222210 0211 147899999999999999999999999999987 4578899999999999887
Q ss_pred HHhcCCCCcccccchHHHHHHHHHHHHcCC-cEEEEeCCCcchHHHHHhCCceeeEEe
Q 005798 186 EITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLFH 242 (676)
Q Consensus 186 ~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv-~v~I~~g~~~~~i~~~~tg~~iGT~i~ 242 (676)
++..+ .+.+|||.||+++|..+++.|. +++|++ ++.+.+++.|+ .||.|.
T Consensus 262 ~i~~g---~~~~GgM~pKv~AA~~~v~~gg~~a~I~~---~~~i~~aL~G~-~GT~I~ 312 (313)
T PRK12454 262 YYEEG---HFKAGSMGPKILAAIRFVENGGKRAIIAS---LEKAVEALEGK-TGTRII 312 (313)
T ss_pred HHhcC---CcCCCChHHHHHHHHHHHHcCCCeEEECc---hHHHHHHHCCC-CCeEeC
Confidence 76543 4778999999999999998875 599985 67888888888 799885
No 154
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK).
Probab=99.94 E-value=2.6e-26 Score=237.41 Aligned_cols=222 Identities=26% Similarity=0.336 Sum_probs=161.5
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccc-cccccccCccccchhhHHHhccHHH--HHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN-SSLADLQKPQNELDGKACAAVGQSS--LMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~-~~~~~l~~~~~~l~~~~~~avG~~~--~~~~~~~~l~~~g~~ 78 (676)
.+++|+.|.+.|++|+||||||||+|+.+++...... .+... |+.+.+.++|..+ +..++++.|.+.|+.
T Consensus 30 ~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~~~~~~~p-------ld~~~a~~~G~ig~~~~~al~~~l~~~~~~ 102 (308)
T cd04235 30 AAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAAEKVPAYP-------LDVCGAMSQGMIGYMLQQALDNELPKRGID 102 (308)
T ss_pred HHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccccCCCCC-------cchhcchhhHHHHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999986665433210 00112 3345566666655 346778889988865
Q ss_pred c------ceEEecccc--cCchhH-----------------------------------------hhhHHHHHHHHHhCC
Q 005798 79 S------SQLLVTDSD--FRDEDF-----------------------------------------RKQLYDTVQSLLDLR 109 (676)
Q Consensus 79 ~------~q~l~~~~d--~~~~~~-----------------------------------------~~~~~~~i~~ll~~g 109 (676)
. +|..+..+| |.++.+ .++ .+.|+.||++|
T Consensus 103 ~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~~d~~~g~rrvV~SP~P~~iv~-~~~I~~Ll~~g 181 (308)
T cd04235 103 KPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFKEDAGRGYRRVVPSPKPKDIVE-IEAIKTLVDNG 181 (308)
T ss_pred CceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEeCCCCceeeeCCCCCccccC-HHHHHHHHHCC
Confidence 2 344555433 332211 122 47899999999
Q ss_pred CeeEEcCCCc--eecCCCCCCCCC-ceecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHH
Q 005798 110 VIPIFNENDA--VSTRKAPYEDSS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 186 (676)
Q Consensus 110 ~iPVi~~~d~--v~~~~~~~~~~~-~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~ 186 (676)
+|||+++... +..+. +.-.+ ..++|+|++|+++|.+|+||.|+|+|||||||+++ ++|++++|++++++|+.++
T Consensus 182 ~IpI~~GggGiPv~~~~--~~~~gveaVid~D~~AallA~~l~Ad~LiilTdVdGVy~~~-~~pda~~i~~Is~~e~~~l 258 (308)
T cd04235 182 VIVIAAGGGGIPVVREG--GGLKGVEAVIDKDLASALLAEEINADLLVILTDVDNVYINF-GKPNQKALEQVTVEELEKY 258 (308)
T ss_pred CEEEEECCCccCEEEcC--CceeeeeeccCccHHHHHHHHHcCCCEEEEEecCCeEECCC-CCCCCeEcCCcCHHHHHHH
Confidence 9999997322 22210 00001 12489999999999999999999999999999975 4689999999999998876
Q ss_pred HhcCCCCcccccchHHHHHHHHHHHHcC-CcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 187 ITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 187 ~~~g~~~~~~~ggM~~K~~aa~~a~~~g-v~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
+.. +.+++|||.+|+++|..+++.| .+++|+| ++++.+++.|+ .||.+
T Consensus 259 ~~~---g~~~tGGM~pKv~aA~~~a~~gg~~v~I~~---~~~i~~aL~G~-~GT~I 307 (308)
T cd04235 259 IEE---GQFAPGSMGPKVEAAIRFVESGGKKAIITS---LENAEAALEGK-AGTVI 307 (308)
T ss_pred Hhc---CccccCCcHHHHHHHHHHHHhCCCeEEECC---HHHHHHHHCCC-CCeEE
Confidence 653 3578999999999999988875 5688977 67888889888 69986
No 155
>PLN02512 acetylglutamate kinase
Probab=99.94 E-value=1.1e-25 Score=236.84 Aligned_cols=221 Identities=22% Similarity=0.312 Sum_probs=164.2
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCcccc-chhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNE-LDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~-l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
++++|+.|+..|.++|||||||+++.. ..+++.+... ..+|.|+.+ ++.-.+..+|. +...+...|.++|++
T Consensus 68 ~~~di~~l~~~g~~iVlVHGgG~~i~~~~~~~gi~~~~~---~G~rvT~~~~lei~~~~l~g~--ln~~lv~~L~~~Gv~ 142 (309)
T PLN02512 68 VIRDLVLLSCVGLRPVLVHGGGPEINSWLKKVGIEPQFK---NGLRVTDAETMEVVEMVLVGK--VNKSLVSLINKAGGT 142 (309)
T ss_pred HHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCCcCC---CCCcCCCHHHHHHHHHHHhhH--HHHHHHHHHHHcCCC
Confidence 678999999999999999999998775 3556655321 347776632 11111222333 233445677788876
Q ss_pred cceE------Eeccc------c--cCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhHHHHH
Q 005798 79 SSQL------LVTDS------D--FRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGL 143 (676)
Q Consensus 79 ~~q~------l~~~~------d--~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~~A~~ 143 (676)
...+ +++.. + +.+..+.++ .+.|+.+|+.|+|||++| +..++ .+..+ +|+|++|+.
T Consensus 143 av~l~g~d~~~i~a~~~~~~~~~~~~G~i~~v~-~~~i~~lL~~g~IPVi~~---~~~d~-----~g~~~~i~~D~~A~~ 213 (309)
T PLN02512 143 AVGLSGKDGRLLRARPSPNSADLGFVGEVTRVD-PTVLRPLVDDGHIPVIAT---VAADE-----DGQAYNINADTAAGE 213 (309)
T ss_pred eEEeehhhCCEEEEEEcCcCccccccceeeecC-HHHHHHHHhCCCEEEEeC---ceECC-----CCCEeccCHHHHHHH
Confidence 4322 11111 1 334555566 789999999999999998 23322 34445 799999999
Q ss_pred HHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-EEEEeC
Q 005798 144 LALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSG 222 (676)
Q Consensus 144 lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I~~g 222 (676)
+|.+|+||+|+|+|||||||++|| +++++|++|+++|+.+++.. .+++|||.+|+++|..+++.|++ |+|+||
T Consensus 214 lA~~L~Ad~li~lTdV~GV~~~~~--~~~~lI~~i~~~e~~~l~~~----~~vtGGM~~Kl~aa~~a~~~Gv~~v~I~~g 287 (309)
T PLN02512 214 IAAALGAEKLILLTDVAGVLEDKD--DPGSLVKELDIKGVRKLIAD----GKIAGGMIPKVECCVRSLAQGVKTAHIIDG 287 (309)
T ss_pred HHHHcCCCEEEEEeCCcceeCCCC--CCcCCCcccCHHHHHHHHhC----CCCCCcHHHHHHHHHHHHHcCCCEEEEecC
Confidence 999999999999999999998753 34789999999988876543 27899999999999999999997 999999
Q ss_pred CCcchH-HHHHhCCceeeEEe
Q 005798 223 FAMDSI-IKVLEGKRVGTLFH 242 (676)
Q Consensus 223 ~~~~~i-~~~~tg~~iGT~i~ 242 (676)
+.++.+ .++++++..||++.
T Consensus 288 ~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 288 RVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred CCCChHHHHHhcCCCCeeEEe
Confidence 999887 67888888999885
No 156
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=99.94 E-value=1.3e-26 Score=237.85 Aligned_cols=223 Identities=27% Similarity=0.324 Sum_probs=167.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|+.|++.|+++|||||||++++........... .....+.+. .....+.+.|+..+...+...|.++|++..+
T Consensus 18 ~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~gi~a~~ 94 (248)
T cd02115 18 LARILVKLASEGGRVVVVHGAGPQITDELLAHGELLG-YARGLRITD--RETDALAAMGEGMSNLLIAAALEQHGIKAVP 94 (248)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHHHhhh-hhhccCCCH--HHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 6788999988999999999999877763322211000 001122221 1245677888877888889999999988655
Q ss_pred EEecc-----ccc--CchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEe
Q 005798 82 LLVTD-----SDF--RDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLV 154 (676)
Q Consensus 82 ~l~~~-----~d~--~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li 154 (676)
+...+ .++ .+.....+ .+.|..+|+.|.|||++|+...... ...+..++++|++|+.+|.+|+|++|+
T Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~~-~~~l~~~l~~~~ipVv~g~~~~~~~----~~~~~~~~~sD~~A~~lA~~l~A~~li 169 (248)
T cd02115 95 LDLTQAGFASPNQGHVGKITKVS-TDRLKSLLENGILPILSGFGGTDEK----ETGTLGRGGSDSTAALLAAALKADRLV 169 (248)
T ss_pred EchHHcCeEeCCCCCcccceeeC-HHHHHHHHhCCcEEEecCeEeccCC----ceeeecCCCHHHHHHHHHHHcCCCEEE
Confidence 42222 122 23334444 6889999999999999984433210 012234599999999999999999999
Q ss_pred eccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHh
Q 005798 155 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 233 (676)
Q Consensus 155 ~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~t 233 (676)
|+|||||||++||+ +|++++|++|+++|+.++.. .|+|..|++++..+.++|++++|+|++.++.+ ++++
T Consensus 170 ~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~--------~g~~~~k~~a~~~~~~~~~~v~I~~~~~~~~l-~~~~ 240 (248)
T cd02115 170 ILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAY--------AGAMVLKPKAADPAARAGIPVRIANTENPGAL-ALFT 240 (248)
T ss_pred EEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHH--------cCCCccCHHHHHHHHHcCCcEEEEeCCCcccc-cccC
Confidence 99999999999994 88999999999988876543 46799999999999999999999999999999 9999
Q ss_pred CCceeeEE
Q 005798 234 GKRVGTLF 241 (676)
Q Consensus 234 g~~iGT~i 241 (676)
++..||+|
T Consensus 241 ~~~~GT~I 248 (248)
T cd02115 241 PDGGGTLI 248 (248)
T ss_pred CCCCCCCC
Confidence 88889964
No 157
>PRK00942 acetylglutamate kinase; Provisional
Probab=99.94 E-value=1.3e-25 Score=234.58 Aligned_cols=219 Identities=22% Similarity=0.322 Sum_probs=165.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCcccc-chhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNE-LDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~-l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
++++|+.|++.|.++|||||||+++.. ..+++..+. ...++.|+.+ ++....+..|+. ...+...|.++|++
T Consensus 44 l~~~i~~l~~~g~~vVlVhGgg~~~~~~~~~~g~~~~~---~~g~~~t~~~~l~~~~~a~~G~l--~~~i~~~L~~~Gv~ 118 (283)
T PRK00942 44 FARDIVLLKQVGINPVVVHGGGPQIDELLKKLGIESEF---VNGLRVTDAETMEVVEMVLAGKV--NKELVSLINKHGGK 118 (283)
T ss_pred HHHHHHHHHHCCCCEEEEeCChHHHHHHHHHCCCCcEe---eCCEecCCHHHHHHHHHHHcCch--HHHHHHHHHhCCCC
Confidence 678999999999999999999998765 334544432 1235555422 221112223633 33455778888877
Q ss_pred cceE------Eecccc--------cCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCce-ecchhHHHHH
Q 005798 79 SSQL------LVTDSD--------FRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGL 143 (676)
Q Consensus 79 ~~q~------l~~~~d--------~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~-~~~~D~~A~~ 143 (676)
..++ +++..+ +.+..+.+| .+.|+.+|++|.|||+++ ++.++ ++.. ++|+|++|+.
T Consensus 119 a~~l~~~~~~~~ta~~~~~~~~~~~~g~i~~i~-~~~l~~ll~~g~vpVv~~---~~~~~-----~g~~~~l~~D~~A~~ 189 (283)
T PRK00942 119 AVGLSGKDGGLITAKKLEEDEDLGFVGEVTPVN-PALLEALLEAGYIPVISP---IGVGE-----DGETYNINADTAAGA 189 (283)
T ss_pred ccceeeccCCEEEEEECCCCCCCccccceEEEC-HHHHHHHHHCCCEEEEcC---cEECC-----CCcEEEECHHHHHHH
Confidence 5543 233322 234556667 789999999999999996 33322 3333 4999999999
Q ss_pred HHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-EEEEeC
Q 005798 144 LALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSG 222 (676)
Q Consensus 144 lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I~~g 222 (676)
+|.+|+|++|+|+|||||||++ ++++|++|+++|+.+++.. .+++|||.+|+++|..++++|++ |+|+|+
T Consensus 190 lA~~l~A~~li~~tdv~Gv~~~-----~~~~i~~i~~~e~~~~~~~----~~~tggm~~Kl~~a~~~~~~gv~~v~I~~g 260 (283)
T PRK00942 190 IAAALGAEKLILLTDVPGVLDD-----KGQLISELTASEAEELIED----GVITGGMIPKVEAALDAARGGVRSVHIIDG 260 (283)
T ss_pred HHHHcCCCEEEEEECCcccccC-----CCcccccCCHHHHHHHHHc----CCCCCchHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999999999999999987 3799999999998876543 26799999999999999999986 999999
Q ss_pred CCcch-HHHHHhCCceeeEEec
Q 005798 223 FAMDS-IIKVLEGKRVGTLFHR 243 (676)
Q Consensus 223 ~~~~~-i~~~~tg~~iGT~i~~ 243 (676)
+.+++ |.++++++..||.+.+
T Consensus 261 ~~~~~ll~~~~~~~~~GT~i~~ 282 (283)
T PRK00942 261 RVPHALLLELFTDEGIGTMIVP 282 (283)
T ss_pred CCCchHHHHHhcCCCcceEEec
Confidence 99999 7999999999999875
No 158
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.93 E-value=1.7e-25 Score=248.11 Aligned_cols=225 Identities=17% Similarity=0.204 Sum_probs=163.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCccccchhhHHHhccHHH--HHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSS--LMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~--~~~~~~~~l~~~g~ 77 (676)
++++|+.|+..|+++||||||||+++. ..++++++. ..++|+|+++.......+.|+.. +..++...+++.|+
T Consensus 45 ~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~---~~G~RvT~~~~l~~~~~~~g~v~~~l~~~l~~g~~a~~~ 121 (441)
T PRK05279 45 IVHDIALLHSLGIRLVLVHGARPQIEEQLAARGIEPRY---HKGLRVTDAAALECVKQAAGELRLDIEARLSMGLPNTPM 121 (441)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHcCCCcee---cCCcccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 689999999999999999999999997 456666542 14588887543222323335433 22333333443343
Q ss_pred ccceE------Eec----------ccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhHH
Q 005798 78 TSSQL------LVT----------DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSL 140 (676)
Q Consensus 78 ~~~q~------l~~----------~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~~ 140 (676)
....+ ++. +..|.+..+.++ .+.|+.+|++|+|||+++ +..++ .|..+ +|+|++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~-~~~i~~ll~~g~ipV~~~---i~~~~-----~g~~~ni~~D~~ 192 (441)
T PRK05279 122 AGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRID-AEAIRRQLDSGAIVLLSP---LGYSP-----TGESFNLTMEEV 192 (441)
T ss_pred cCCcceEeeccEEEEEECCCCCCccccceeeEEEEe-HHHHHHHHHCCCeEEECC---ceECC-----CCCEEEECHHHH
Confidence 21111 110 112345555566 899999999999999986 33321 33344 999999
Q ss_pred HHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-EEE
Q 005798 141 AGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVI 219 (676)
Q Consensus 141 A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I 219 (676)
|+.||.+|+|++|+|+|||||||++ ++++|++++.+++.+++..- .+.+++|||.+|+++|..++++|++ |+|
T Consensus 193 a~~lA~~l~a~~lv~ltdv~GV~~~-----~~~~i~~i~~~~~~~~~~~~-~~~~~~ggM~~Kv~~a~~~~~~gv~~v~i 266 (441)
T PRK05279 193 ATQVAIALKADKLIFFTESQGVLDE-----DGELIRELSPNEAQALLEAL-EDGDYNSGTARFLRAAVKACRGGVRRSHL 266 (441)
T ss_pred HHHHHHHcCCCEEEEEECCCCccCC-----CCchhhhCCHHHHHHHHhhh-hcCCCCccHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999999999999999999964 47899999998887665411 1226699999999999999999996 999
Q ss_pred EeCCCcchH-HHHHhCCceeeEEecC
Q 005798 220 TSGFAMDSI-IKVLEGKRVGTLFHRD 244 (676)
Q Consensus 220 ~~g~~~~~i-~~~~tg~~iGT~i~~~ 244 (676)
+|++.|+++ .++++.+..||.+..+
T Consensus 267 ~~~~~~~~l~~~l~~~~g~GT~i~~~ 292 (441)
T PRK05279 267 ISYAEDGALLQELFTRDGIGTMIVME 292 (441)
T ss_pred ecCCCCcHHHHHHhcCCCCceEEecC
Confidence 999999998 5667677799999876
No 159
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A
Probab=99.93 E-value=2.1e-25 Score=232.34 Aligned_cols=220 Identities=23% Similarity=0.357 Sum_probs=162.2
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCcccc-chhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNE-LDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~-l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
++++|+.|+..|.++|||||||+++.. ..+++.... ...++.|+.. ++.......|. +...+...|.++|++
T Consensus 35 ~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~~~g~~~~~---~~g~r~t~~~~~~~~~~~~~g~--ln~~l~~~L~~~Gv~ 109 (279)
T cd04250 35 FARDIVLLKYVGINPVVVHGGGPEINEMLKKLGIESEF---VNGLRVTDEETMEIVEMVLVGK--VNKEIVSLINRAGGK 109 (279)
T ss_pred HHHHHHHHHHCCCCEEEEcCCcHHHHHHHHHCCCCCEe---ECCeecCCHHHHHHHHHHHcCc--hHHHHHHHHHHcCCC
Confidence 678888999999999999999998775 345555421 1235555532 11111122253 333456778877765
Q ss_pred cceE------Eeccc-------------ccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchh
Q 005798 79 SSQL------LVTDS-------------DFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDND 138 (676)
Q Consensus 79 ~~q~------l~~~~-------------d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D 138 (676)
...+ +++.. .+.+..+.++ .+.|+.+|+.|.|||+++ +..++ .+..+ +|+|
T Consensus 110 a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~-~~~i~~ll~~g~IPVi~~---~~~~~-----~g~~~~~~~D 180 (279)
T cd04250 110 AVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVN-PELLETLLEAGYIPVIAP---VGVGE-----DGETYNINAD 180 (279)
T ss_pred cceeecCCCCEEEEEECcccccCCCcccCcccceEEEc-HHHHHHHHHCCCeEEEcC---CccCC-----CCcEEEeCHH
Confidence 3322 22211 1334455566 789999999999999996 33322 33344 8999
Q ss_pred HHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-E
Q 005798 139 SLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-V 217 (676)
Q Consensus 139 ~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v 217 (676)
++|+.+|.+|+||+|+|+|||||||++|| +| +++|++++++|+.+++.. .+++|||.+|+++|..++++|++ |
T Consensus 181 ~~A~~lA~~l~A~~li~ltdv~Gv~~~~p-~~-~~~i~~i~~~e~~~l~~~----~~~tGgm~~Kl~~a~~a~~~g~~~v 254 (279)
T cd04250 181 TAAGAIAAALKAEKLILLTDVAGVLDDPN-DP-GSLISEISLKEAEELIAD----GIISGGMIPKVEACIEALEGGVKAA 254 (279)
T ss_pred HHHHHHHHHhCCCEEEEEECCcccccCCC-CC-ccccccCCHHHHHHHHHc----CCCCCchHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999988 33 789999999998875543 27899999999999999999997 9
Q ss_pred EEEeCCCcchH-HHHHhCCceeeEE
Q 005798 218 VITSGFAMDSI-IKVLEGKRVGTLF 241 (676)
Q Consensus 218 ~I~~g~~~~~i-~~~~tg~~iGT~i 241 (676)
+|+||+.|+++ .++++++..||++
T Consensus 255 ~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 255 HIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred EEeCCCCCchHHHHHhcCCCCccCC
Confidence 99999999975 8889988899964
No 160
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and
Probab=99.93 E-value=2.7e-25 Score=226.58 Aligned_cols=202 Identities=18% Similarity=0.259 Sum_probs=153.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccc-
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS- 80 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~- 80 (676)
++++|+.+++.|+++||||||+...+..+++...... ...+.+ .++++.++|+..++.++...|.++|++..
T Consensus 20 ~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~-~~~~~~------~~~~i~a~Ge~~~~~l~~~~l~~~g~~a~~ 92 (239)
T cd04261 20 VAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS-PRPPAR------ELDVLLSTGEQVSIALLAMALNRLGIKAIS 92 (239)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc-cCCCHH------HHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 7899999999999999999996556665554322110 000111 24578889999988889999999998643
Q ss_pred ----eE-Eeccccc-CchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCc----eecchhHHHHHHHHHcCC
Q 005798 81 ----QL-LVTDSDF-RDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG----IFWDNDSLAGLLALELKA 150 (676)
Q Consensus 81 ----q~-l~~~~d~-~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~----~~~~~D~~A~~lA~~l~A 150 (676)
+. +++.++| .+.....+ .+.++.+++.|+|||++|.-. .++ ++. .++|+|++|+.+|.+|+|
T Consensus 93 l~~~~~~l~~~~~~~~~~i~~~~-~~~l~~ll~~~~ipVi~G~~~--~~~-----~g~~~~l~rg~sD~~A~~lA~~l~A 164 (239)
T cd04261 93 LTGWQAGILTDGHHGKARIIDID-PDRIRELLEEGDVVIVAGFQG--INE-----DGDITTLGRGGSDTSAVALAAALGA 164 (239)
T ss_pred echhhCCEEecCCCCcceechhh-HHHHHHHHHcCCeEEEcCccc--cCC-----CCCEEecCCCChHHHHHHHHHHcCC
Confidence 33 5565566 33344455 589999999999999987211 111 121 235999999999999999
Q ss_pred CeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005798 151 DLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 226 (676)
Q Consensus 151 d~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~ 226 (676)
|+|+++|||||||++||+ +|++++|++|+++|+.++... |.++.|++|+..|.++|+|++|.|+++|+
T Consensus 165 ~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~~--------G~~~~~~~a~~~~~~~~i~i~I~n~~~~~ 233 (239)
T cd04261 165 DRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMASL--------GAKVLHPRSVELAKKYGVPLRVLSSFSEE 233 (239)
T ss_pred CEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHhc--------cccccCHHHHHHHHHcCCeEEEecCCCCC
Confidence 999999999999999995 789999999999998865432 44678899999999999999999998874
No 161
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.93 E-value=3.3e-25 Score=226.02 Aligned_cols=202 Identities=17% Similarity=0.239 Sum_probs=151.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|+++++.|+++|||||||...+..+++...... .+.+.. .++++.++|+..++.+|...|+++|++...
T Consensus 20 ~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~~-~~~~~~------~~~~i~~~Ge~~~~~~~~~~l~~~g~~a~~ 92 (239)
T cd04246 20 VAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEVS-PRPSPR------ELDMLLSTGEQISAALLAMALNRLGIKAIS 92 (239)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHhc-cCCCHH------HHHHHHHHhHHHHHHHHHHHHHhCCCCeEE
Confidence 7899999999999999999975445554554332211 111111 245788999998888899999999987543
Q ss_pred E------EecccccCc-hhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCc----eecchhHHHHHHHHHcCC
Q 005798 82 L------LVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG----IFWDNDSLAGLLALELKA 150 (676)
Q Consensus 82 ~------l~~~~d~~~-~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~----~~~~~D~~A~~lA~~l~A 150 (676)
+ +++..+|.+ .....+ .+.+..++++|+|||++|.-. ..+ ++. .++|+|++|+.+|.+|+|
T Consensus 93 l~~~~~~l~~~~~~~~~~~~~~~-~~~l~~ll~~g~ipVi~g~~~--~~~-----~g~~~~l~~g~~D~~A~~lA~~l~A 164 (239)
T cd04246 93 LTGWQAGILTDDHHGNARIIDID-PKRILEALEEGDVVVVAGFQG--VNE-----DGEITTLGRGGSDTTAVALAAALKA 164 (239)
T ss_pred eccccCCEEecCCCCceeechhh-HHHHHHHHhcCCEEEEcCccc--cCC-----CCCEEecCCCChHHHHHHHHHHcCC
Confidence 3 444444432 223334 689999999999999987211 111 121 235899999999999999
Q ss_pred CeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005798 151 DLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 226 (676)
Q Consensus 151 d~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~ 226 (676)
|+|+|+|||||||++||+ +|++++|++|+++|+.++... |.++.|++++..+.++|+|++|.|+++++
T Consensus 165 ~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~~--------G~~~~~~~a~~~a~~~gi~i~i~~~~~~~ 233 (239)
T cd04246 165 DRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMASL--------GAKVLHPRSVELAKKYNVPLRVRSSFSEN 233 (239)
T ss_pred CEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHhC--------CCcccCHHHHHHHHHCCCeEEEecCCCCC
Confidence 999999999999999995 799999999999998865432 45678999999999999999999998764
No 162
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.93 E-value=1.5e-24 Score=239.43 Aligned_cols=219 Identities=17% Similarity=0.189 Sum_probs=164.1
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCcccc-chhhHHHhccHHH--HHHHHHHHhhhCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNE-LDGKACAAVGQSS--LMALYDTLFSQLD 76 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~-l~~~~~~avG~~~--~~~~~~~~l~~~g 76 (676)
|+++|+.|+..|+++|||||||+++.. ..++++++.. ..+|.|+.+ ++.... +.|+.. +...+.......+
T Consensus 37 ~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~~~g~~~~~~---~G~RvT~~~~l~~~~~-~~g~vn~~l~~~l~~~~~~~~ 112 (429)
T TIGR01890 37 IVADIALLHSLGVRLVLVHGARPQIERILAARGRTPHYH---RGLRVTDEASLEQAQQ-AAGTLRLAIEARLSMSLSNTP 112 (429)
T ss_pred HHHHHHHHHHCCCcEEEEcCCCHHHHHHHHHcCCCceee---CCcccCCHHHHHHHHH-HhChHHHHHHHHHHhcCCccc
Confidence 789999999999999999999999987 4667776432 458888743 222222 355544 2333333332222
Q ss_pred -----Cccc--eEEe-------c--ccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhH
Q 005798 77 -----VTSS--QLLV-------T--DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDS 139 (676)
Q Consensus 77 -----~~~~--q~l~-------~--~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~ 139 (676)
+.+. .++. . +..+.+..+.+| .+.|+.+|+.|+|||+++ ++.++ +|..+ +|+|+
T Consensus 113 ~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~-~~~l~~ll~~g~ipvi~p---i~~~~-----~g~~~nvnaD~ 183 (429)
T TIGR01890 113 MAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKID-TEGIRRQLDAGSIVLLSP---LGHSP-----TGETFNLDMED 183 (429)
T ss_pred ccccCceEccceEEEEEECCCCcCccccccceEEEEc-HHHHHHHHHCCCeEEECC---cccCC-----CCCEEEeCHHH
Confidence 2211 1211 0 123567777788 899999999999999997 44432 44455 99999
Q ss_pred HHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccc-hHHHHHHHHHHHHcCCc-E
Q 005798 140 LAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG-MTAKVNAAYCAACAGIP-V 217 (676)
Q Consensus 140 ~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~gg-M~~K~~aa~~a~~~gv~-v 217 (676)
+|+.+|.+|+|++|+|+|||+|||++ ++++|++|+.+|+.+++.. +.|| |.+|+++|..|++.|++ |
T Consensus 184 ~A~~lA~al~a~kli~ltdv~Gv~~~-----~g~~i~~i~~~~~~~l~~~------~~~~~~~~kl~~a~~a~~~gv~~v 252 (429)
T TIGR01890 184 VATSVAISLKADKLIYFTLSPGISDP-----DGTLAAELSPQEVESLAER------LGSETTRRLLSAAVKACRGGVHRS 252 (429)
T ss_pred HHHHHHHHcCCCEEEEEeCCCcccCC-----CCCCcccCCHHHHHHHHHh------ccCCCcHHHHHHHHHHHHcCCCeE
Confidence 99999999999999999999999975 3789999999888876653 2455 59999999999999986 9
Q ss_pred EEEeCCCcchH-HHHHhCCceeeEEecC
Q 005798 218 VITSGFAMDSI-IKVLEGKRVGTLFHRD 244 (676)
Q Consensus 218 ~I~~g~~~~~i-~~~~tg~~iGT~i~~~ 244 (676)
+|+||+.++++ .++++.+..||.+..+
T Consensus 253 ~i~~g~~~~~l~~el~~~~g~GT~i~~d 280 (429)
T TIGR01890 253 HIVSYAEDGSLLQELFTRDGIGTSISKE 280 (429)
T ss_pred EEECCCCCcHHHHHHhcCCCCcceEecc
Confidence 99999999998 7778888899999876
No 163
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.93 E-value=7.9e-25 Score=224.94 Aligned_cols=212 Identities=25% Similarity=0.315 Sum_probs=152.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--Hhccccccccccccc--ccCccccchhhHHHhccHHHHHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLAD--LQKPQNELDGKACAAVGQSSLMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~--l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~ 77 (676)
++++|+.| |.++|||||||+++.. +.+++++.....+.. .|.|+.+.-.....++|... ..+...|.++|+
T Consensus 16 ~~~~i~~l---g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~G~~~Rvt~~~~l~~~~~a~~~ln--~~iv~~L~~~Gi 90 (257)
T cd04251 16 VIDDIANF---GERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSGIRSRYTDKETLEVFVMVMGLIN--KKIVARLHSLGV 90 (257)
T ss_pred HHHHHHHc---CCCEEEECCCHHHHHHHHHHcCCCcEEEeCCCCCccccCCHHHHHHHHHHHHHHH--HHHHHHHHhCCC
Confidence 67888877 8999999999998875 455665532100113 35555321112223333322 233446666666
Q ss_pred cc-----ceE-------------------EecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCce
Q 005798 78 TS-----SQL-------------------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 133 (676)
Q Consensus 78 ~~-----~q~-------------------l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~ 133 (676)
+. .+. .+++.+|.+..+.++ .+.|+.+|+.|+|||+++ +..++ +|..
T Consensus 91 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~-~~~i~~ll~~g~vpVi~~---~~~~~-----~G~~ 161 (257)
T cd04251 91 KAVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVN-SDLIEALLDAGYLPVVSP---VAYSE-----EGEP 161 (257)
T ss_pred CceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEc-HHHHHHHHhCCCeEEEeC---cEECC-----CCcE
Confidence 53 221 111233455566667 799999999999999986 33321 3444
Q ss_pred e-cchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHH
Q 005798 134 F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 212 (676)
Q Consensus 134 ~-~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~ 212 (676)
+ +|+|++|+.+|.+|+||+|+|+|||||||++ +++|++|+++|+.+++. +++|||.+|+++|..+++
T Consensus 162 ~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~------~~~i~~i~~~e~~~l~~------~~~ggm~~Kl~aa~~a~~ 229 (257)
T cd04251 162 LNVDGDRAAAAIAAALKAERLILLTDVEGLYLD------GRVIERITVSDAESLLE------KAGGGMKRKLLAAAEAVE 229 (257)
T ss_pred EecCHHHHHHHHHHHcCCCEEEEEeCChhheeC------CcccCccCHHHHHHHHh------hCCCchHHHHHHHHHHHH
Confidence 4 9999999999999999999999999999974 78999999988886552 579999999999999999
Q ss_pred cCCc-EEEEeCCCcchHHHHHhCCceeeEE
Q 005798 213 AGIP-VVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 213 ~gv~-v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
+|++ ++|+||+.|+++.+++.|+ ||.|
T Consensus 230 ~gv~~v~i~~g~~~~~l~~~l~g~--gT~i 257 (257)
T cd04251 230 GGVREVVIGDARADSPISSALNGG--GTVI 257 (257)
T ss_pred cCCCEEEEecCCCccHHHHHHcCC--CcCC
Confidence 9996 9999999999999888774 7753
No 164
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.92 E-value=1.1e-24 Score=224.49 Aligned_cols=217 Identities=24% Similarity=0.319 Sum_probs=157.2
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCcccc-chhhHHHhc-cHHHHHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNE-LDGKACAAV-GQSSLMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~-l~~~~~~av-G~~~~~~~~~~~l~~~g~ 77 (676)
++++|+.|+..|.++|||||||+++.. +.+++..+. ...++.++.+ ++. ...++ |. +...+...|.++|+
T Consensus 19 ~~~~i~~l~~~g~~~VlVhG~g~~~~~~~~~~~~~~~~---~~~~r~t~~~~l~~-~~~a~~g~--ln~~i~~~L~~~Gv 92 (256)
T cd04238 19 FADDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEF---VNGLRVTDKETMEI-VEMVLAGK--VNKELVSLLNRAGG 92 (256)
T ss_pred HHHHHHHHHHCCCCEEEECCCcHHHHHHHHHCCCCCEe---ECCeecCCHHHHHH-HHHHHcCc--hHHHHHHHHHhCCC
Confidence 678899999999999999999987654 344554321 1234444421 111 12222 52 23334567777776
Q ss_pred ccc-----eE-Eeccc---------ccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHH
Q 005798 78 TSS-----QL-LVTDS---------DFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAG 142 (676)
Q Consensus 78 ~~~-----q~-l~~~~---------d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~ 142 (676)
+.. +. +++.. .|.+..+.++ .+.|+.+|++|+|||+++ +..++ ..+..++|+|++|+
T Consensus 93 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~-~~~l~~ll~~g~ipVv~~---~~~~~----~g~~~~~~~D~~A~ 164 (256)
T cd04238 93 KAVGLSGKDGGLIKAEKKEEKDIDLGFVGEVTEVN-PELLETLLEAGYIPVIAP---IAVDE----DGETYNVNADTAAG 164 (256)
T ss_pred CCCCcccccCCEEEEEECCCCCCCcccccceEEEC-HHHHHHHHHCCCEEEECC---cEECC----CCcEEEECHHHHHH
Confidence 532 21 33321 1445555666 789999999999999996 34322 12233599999999
Q ss_pred HHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-EEEEe
Q 005798 143 LLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITS 221 (676)
Q Consensus 143 ~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I~~ 221 (676)
.+|.+|+||+|+|+|||||||++ ++++|++++++|+.+++.. .+.+|||.+|+++|..+++.|++ |+|+|
T Consensus 165 ~lA~~l~a~~li~ltdv~Gv~~~-----~~~~i~~i~~~e~~~~~~~----~~~~ggm~~Kl~~a~~~~~~g~~~v~I~~ 235 (256)
T cd04238 165 AIAAALKAEKLILLTDVPGVLDD-----PGSLISELTPKEAEELIED----GVISGGMIPKVEAALEALEGGVRKVHIID 235 (256)
T ss_pred HHHHHcCCCEEEEEeCCccccCC-----CCCccccCCHHHHHHHHHc----CCCCCChHHHHHHHHHHHHhCCCEEEEeC
Confidence 99999999999999999999987 2789999999888765542 26799999999999999999885 99999
Q ss_pred CCCcchHHHHHhC-CceeeEE
Q 005798 222 GFAMDSIIKVLEG-KRVGTLF 241 (676)
Q Consensus 222 g~~~~~i~~~~tg-~~iGT~i 241 (676)
|+.+++|.+.+.+ +..||.+
T Consensus 236 g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 236 GRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCCC
Confidence 9999999877766 5678864
No 165
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=99.92 E-value=1e-24 Score=222.89 Aligned_cols=215 Identities=16% Similarity=0.118 Sum_probs=155.0
Q ss_pred CHHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 1 MICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 1 ~~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
.|+++|+.|+..|+++|||||||+++.. +.++++++.. ..+|.|+.+--.....+++. +...+...|.++|++
T Consensus 16 ~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~---~g~RvT~~~~l~~v~~al~~--vn~~iv~~l~~~g~~ 90 (248)
T cd04252 16 ELAASLSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYV---DGLRVTDPETLAVARKVFLE--ENLKLVEALERNGAR 90 (248)
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCcEee---CCcccCCHHHHHHHHHHHHH--HHHHHHHHHHhCCCC
Confidence 3789999999999999999999999886 4667776432 34777764311122223332 222233445555554
Q ss_pred cce----EEec------ccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhHHHHHHHHH
Q 005798 79 SSQ----LLVT------DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALE 147 (676)
Q Consensus 79 ~~q----~l~~------~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~ 147 (676)
... ++.. +-.|.+..+.+| .+.|+.+|+.|+|||++| +.+.. ++..+ +|+|.+|+.+|.+
T Consensus 91 a~~l~~~~~~a~~~~~~d~g~~G~v~~i~-~~~i~~~L~~g~IPVi~p-~~~~~-------~g~~~nvnaD~~A~~lA~a 161 (248)
T cd04252 91 ARPITSGVFEAEYLDKDKYGLVGKITGVN-KAPIEAAIRAGYLPILTS-LAETP-------SGQLLNVNADVAAGELARV 161 (248)
T ss_pred cccccCceEEEEECcCccCCccCceeeEC-HHHHHHHHHCCCeEEECC-ceECC-------CCCEEEECHHHHHHHHHHH
Confidence 221 1111 112556677777 899999999999999997 43322 44445 9999999999999
Q ss_pred cCCCeEeeccccCccccCCCCCCCCceeceeehh-chHHHHhcCCCCcccccchHHHHHHHHHHHHc--CCc-EEEEeCC
Q 005798 148 LKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRA-KHQAEITFGDKSRVGRGGMTAKVNAAYCAACA--GIP-VVITSGF 223 (676)
Q Consensus 148 l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~-e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~--gv~-v~I~~g~ 223 (676)
|+|++|+|+|||+|||++ ++++|++++.. +..+++.. .+++|||++|++++..+.+. ++. |+|++
T Consensus 162 L~a~kli~ltdv~GV~~~-----~g~~i~~i~~~~~~~~l~~~----~~vtgGM~~Kl~~~~~~~~~~~~~~~v~i~~-- 230 (248)
T cd04252 162 LEPLKIVFLNETGGLLDG-----TGKKISAINLDEEYDDLMKQ----PWVKYGTKLKIKEIKELLDTLPRSSSVSITS-- 230 (248)
T ss_pred cCCCeEEEEECCcccCCC-----CCCcccccCHHHHHHHHHHc----CCcCCchHHHHHHHHHHHHhCCCceEEEEEC--
Confidence 999999999999999975 36899999964 55555543 37899999999999999887 554 99988
Q ss_pred CcchH-HHHHhCCceeeEE
Q 005798 224 AMDSI-IKVLEGKRVGTLF 241 (676)
Q Consensus 224 ~~~~i-~~~~tg~~iGT~i 241 (676)
++++ .++++.+..||.+
T Consensus 231 -~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 231 -PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred -CchHHHHHhcCCCCCccC
Confidence 5776 6788888889864
No 166
>PRK12354 carbamate kinase; Reviewed
Probab=99.92 E-value=9.9e-25 Score=224.62 Aligned_cols=220 Identities=23% Similarity=0.261 Sum_probs=154.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHH--HHHHHHHHhhhCCCc-
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSS--LMALYDTLFSQLDVT- 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~--~~~~~~~~l~~~g~~- 78 (676)
.++.|+.|.+ |+++||+||+|||+|+..+........+...+ ..+.+.+.|..+ +...+.+.|.+..+.
T Consensus 31 ~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~~~~~~pl-------~~~~a~sqg~iGy~l~q~l~~~l~~~~v~t 102 (307)
T PRK12354 31 AAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYKDVTPYPL-------DVLGAETEGMIGYMLEQELGNLLPERPVAT 102 (307)
T ss_pred HHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhcCCCCCCc-------chhcccccchHHHHHHHHHHHHhcCCcceE
Confidence 4678888988 99999999999999974443222110001122 234455556655 335566677553332
Q ss_pred -cceEEecccc--cCchhH----------------------------------------hhhHHHHHHHHHhCCCeeEEc
Q 005798 79 -SSQLLVTDSD--FRDEDF----------------------------------------RKQLYDTVQSLLDLRVIPIFN 115 (676)
Q Consensus 79 -~~q~l~~~~d--~~~~~~----------------------------------------~~~~~~~i~~ll~~g~iPVi~ 115 (676)
.+|+++..+| |.++.+ .++ .+.|+.||++|+|||.+
T Consensus 103 ivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~g~rrVv~SP~P~~ive-~~~I~~Ll~~g~ivIa~ 181 (307)
T PRK12354 103 LLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGDYFRRVVPSPRPKRIVE-IRPIRWLLEKGHLVICA 181 (307)
T ss_pred EEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCCceEEEecCCCCcceeC-HHHHHHHHHCCCEEEEe
Confidence 3577776654 433222 123 78999999999987776
Q ss_pred CCCceecCCCCCCCC---Cc-eecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCC
Q 005798 116 ENDAVSTRKAPYEDS---SG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 191 (676)
Q Consensus 116 ~~d~v~~~~~~~~~~---~~-~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~ 191 (676)
|++.+.... +++. +. .++|+|++|++||.+|+||.|+|+|||||||+++ .+|++++|++++.+|+.++
T Consensus 182 GGGGIPV~~--~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVdGVy~~~-~~p~~k~i~~it~~e~~~~----- 253 (307)
T PRK12354 182 GGGGIPVVY--DADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVDAVYLDW-GKPTQRAIAQATPDELREL----- 253 (307)
T ss_pred CCCccCeEe--cCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCcceecCC-CCCCCeECCCCCHHHHHhh-----
Confidence 544433210 0001 11 2589999999999999999999999999999985 4688999999999888753
Q ss_pred CCcccccchHHHHHHHHHHHHcCC-cEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 192 KSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 192 ~~~~~~ggM~~K~~aa~~a~~~gv-~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
.+++|||.||+++|..+++.|. +++|.+ ++.+.+++.|+ .||++..+
T Consensus 254 --~f~~GgM~pKV~AA~~~~~~gg~~viI~~---~~~l~~al~G~-~GT~I~~~ 301 (307)
T PRK12354 254 --GFAAGSMGPKVEAACEFVRATGKIAGIGS---LEDIQAILAGE-AGTRISPE 301 (307)
T ss_pred --CCCcCChHHHHHHHHHHHHhCCCEEEECC---HHHHHHHHCCC-CceEEecC
Confidence 2679999999999999888765 488854 66788888887 79999865
No 167
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=99.92 E-value=1.1e-24 Score=220.28 Aligned_cols=190 Identities=20% Similarity=0.248 Sum_probs=149.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccc-
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS- 80 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~- 80 (676)
++++|+.+ +.|+++||||||++++++.++++ ..+.++||..++.+|...|+++|+++.
T Consensus 20 ~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~--------------------~~~~s~Ge~~~~~l~~~~l~~~Gi~a~~ 78 (227)
T cd04234 20 VADIIKAY-EKGNRVVVVVSAMGGVTDLLIEL--------------------ALLLSFGERLSARLLAAALRDRGIKARS 78 (227)
T ss_pred HHHHHHHh-hcCCCEEEEEcCCCcccHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 67888888 88999999999998877754432 157789999999999999999998764
Q ss_pred ----eEEeccccc-CchhHhhhHHHHHHHHHhC-CCeeEEcCCCceecCCCCCCCCCc----eecchhHHHHHHHHHcCC
Q 005798 81 ----QLLVTDSDF-RDEDFRKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSG----IFWDNDSLAGLLALELKA 150 (676)
Q Consensus 81 ----q~l~~~~d~-~~~~~~~~~~~~i~~ll~~-g~iPVi~~~d~v~~~~~~~~~~~~----~~~~~D~~A~~lA~~l~A 150 (676)
|++++..++ ..........+.++.+++. |.|||++|+-. .++ .+. .++++|++|+.+|.+|+|
T Consensus 79 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~i~--~~~-----~g~~~~l~rg~sD~~A~~lA~~l~A 151 (227)
T cd04234 79 LDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIG--RNE-----DGEITTLGRGGSDYSAAALAAALGA 151 (227)
T ss_pred eCHHHCCEEcCCccchhhHHHHHHHHHHHHHhhCCCEEEecCcee--cCC-----CCCEEEeeCCCcHHHHHHHHHHhCC
Confidence 555555554 2222222337899999999 99999987211 111 111 235899999999999999
Q ss_pred CeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcch
Q 005798 151 DLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDS 227 (676)
Q Consensus 151 d~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~ 227 (676)
|+|+|+|||||||++||+ +|++++|++|+++|+.++... +.++| |++|+..|.++|++++|.|+++|+.
T Consensus 152 ~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~~------G~~~~--~~~a~~~a~~~~i~i~i~~~~~~~~ 221 (227)
T cd04234 152 DEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYF------GAKVL--HPRAVEPARKANIPIRVKNTFNPEA 221 (227)
T ss_pred CEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHhC------Ccccc--CHHHHHHHHHcCCeEEEEeCCCCCC
Confidence 999999999999999995 799999999999999865543 34555 6789999999999999999988753
No 168
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.92 E-value=1.6e-24 Score=222.69 Aligned_cols=216 Identities=24% Similarity=0.269 Sum_probs=152.5
Q ss_pred HHHHHHHHH-HCCCeEEEEeCChhHHhH--HhcccccccccccccccCccccchhhHHHhc-cHHHHHHHHHHHhhhCCC
Q 005798 2 ICLQLKELN-SQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNELDGKACAAV-GQSSLMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~-~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~av-G~~~~~~~~~~~l~~~g~ 77 (676)
++++|+++. ..|.++|||||||+++.. +.+++..+.. ..+|.|+.+-......++ |+.. ....+.+ .++|+
T Consensus 19 ~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~~~~g~~~~~~---~g~rvt~~~~l~~~~~~~~~~~n-~~lv~~l-~~~Gv 93 (252)
T cd04249 19 LFSALSEYQQQHNRQLVIVHGGGCVVDELLKKLNFPSEKK---NGLRVTPKEQIPYITGALAGTAN-KQLMAQA-IKAGL 93 (252)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCCEEE---CCEecCCHHHHHHHHHHHcCccc-HHHHHHH-HhCCC
Confidence 678888775 457899999999998775 3445544321 246665532111122222 2221 1222233 35666
Q ss_pred ccceE------Eeccc----c--cCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCce-ecchhHHHHHH
Q 005798 78 TSSQL------LVTDS----D--FRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLL 144 (676)
Q Consensus 78 ~~~q~------l~~~~----d--~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~-~~~~D~~A~~l 144 (676)
+...+ +++.. | +.+..+.+| .+.|+.+|+.|+|||+++ . +.++ ++.. ++|+|++|+++
T Consensus 94 ~a~~l~~~~~~~~~~~~~~~~~~~~G~v~~i~-~~~l~~ll~~g~ipVi~~-~--g~~~-----~g~~~~~~~D~~A~~l 164 (252)
T cd04249 94 KPVGLSLADGGMTAVTQLDPELGAVGKATAND-PSLLNDLLKAGFLPIISS-I--GADD-----QGQLMNVNADQAATAI 164 (252)
T ss_pred CceeeeccCCCEEEEEEcCCCCCcccceEEEc-HHHHHHHHHCCCEEEECC-C--EECC-----CCCEeeecHHHHHHHH
Confidence 53322 23221 2 335555666 789999999999999997 3 3321 3333 49999999999
Q ss_pred HHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcC-CcEEEEeCC
Q 005798 145 ALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGF 223 (676)
Q Consensus 145 A~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~g-v~v~I~~g~ 223 (676)
|.+|+|| ++|+|||||||++| +++|++++++|+.+++..+ .++|||.+|+++|..+++.+ ++++|+||+
T Consensus 165 A~~l~A~-~i~ltdv~Gv~~~~-----~~~i~~i~~~e~~~~~~~g----~~~gGm~~kl~~a~~~~~~~~~~v~I~~g~ 234 (252)
T cd04249 165 AQLLNAD-LVLLSDVSGVLDAD-----KQLISELNAKQAAELIEQG----VITDGMIVKVNAALDAAQSLRRGIDIASWQ 234 (252)
T ss_pred HHHcCCC-EEEEeCCcccCCCC-----CcCccccCHHHHHHHHhcC----CCcCCcHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 9999999 78999999999875 4799999999888765432 78999999999999998876 569999999
Q ss_pred CcchHHHHHhCCceeeEE
Q 005798 224 AMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 224 ~~~~i~~~~tg~~iGT~i 241 (676)
.++.+.++++|+..||.+
T Consensus 235 ~~~~l~~~l~g~~~GT~I 252 (252)
T cd04249 235 YPEQLTALLAGEPVGTKI 252 (252)
T ss_pred CccHHHHHHcCCCCCcCC
Confidence 999999999999899864
No 169
>PRK09411 carbamate kinase; Reviewed
Probab=99.92 E-value=2.8e-24 Score=219.21 Aligned_cols=214 Identities=21% Similarity=0.249 Sum_probs=153.7
Q ss_pred HHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCc----
Q 005798 3 CLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVT---- 78 (676)
Q Consensus 3 ~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~---- 78 (676)
++.|+.|.++ |++||+||+|||+|+..++.......+.. .|..+.+.+.|..+. .+++.|++.++.
T Consensus 33 a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~~~~~~-------pld~~~a~sqG~iGy--~l~q~l~~~~~~~~v~ 102 (297)
T PRK09411 33 VPALARLARS-YRLAIVHGNGPQVGLLALQNLAWKEVEPY-------PLDVLVAESQGMIGY--MLAQSLSAQPQMPPVT 102 (297)
T ss_pred HHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhcCCCCC-------CchhhhhhcccHHHH--HHHHHHHHcCCCCCeE
Confidence 6789999988 99999999999999866554332110111 233456666666653 334566555542
Q ss_pred --cceEEecccc--cCchhH----------------------------------------hhhHHHHHHHHHhCCCeeEE
Q 005798 79 --SSQLLVTDSD--FRDEDF----------------------------------------RKQLYDTVQSLLDLRVIPIF 114 (676)
Q Consensus 79 --~~q~l~~~~d--~~~~~~----------------------------------------~~~~~~~i~~ll~~g~iPVi 114 (676)
.+|+++..+| |.++.+ .++ .+.|+.||++|+|||.
T Consensus 103 t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~~~dg~g~rrVVpSP~P~~iVe-~~~I~~Ll~~G~IVI~ 181 (297)
T PRK09411 103 TVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILD-SEAIELLLKEGHVVIC 181 (297)
T ss_pred EEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEEEecCCceEEEccCCCCcceEC-HHHHHHHHHCCCEEEe
Confidence 2466776655 433211 233 7899999999999888
Q ss_pred cCCCceecCCCCCCCCCc-eecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCC
Q 005798 115 NENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKS 193 (676)
Q Consensus 115 ~~~d~v~~~~~~~~~~~~-~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~ 193 (676)
++.+.+.... ++++. .++|+|++|+.||.+|+||+|+|+|||||||+++ .+|++++|++++.+|+.+++
T Consensus 182 ~gGGGIPV~~---~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVdGV~~n~-~~p~~~~I~~it~~e~~~~~------ 251 (297)
T PRK09411 182 SGGGGVPVTE---DGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENW-GTPQQRAIRHATPDELAPFA------ 251 (297)
T ss_pred cCCCCCCeEE---cCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCchhhccCC-CCCCCcCCCCcCHHHHHHhc------
Confidence 7643333211 11232 3499999999999999999999999999999874 57889999999999886543
Q ss_pred cccccchHHHHHHHHHHHHcC-CcEEEEeCCCcchHHHHHhCCceeeEEe
Q 005798 194 RVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLFH 242 (676)
Q Consensus 194 ~~~~ggM~~K~~aa~~a~~~g-v~v~I~~g~~~~~i~~~~tg~~iGT~i~ 242 (676)
..+|||.||+++|..+++.+ .+++|.+ ++.+.+++.|+ .||.|.
T Consensus 252 -~~~GgM~pKVeAA~~~v~~~g~~a~I~~---l~~~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 252 -KADGAMGPKVTAVSGYVRSRGKPAWIGA---LSRIEETLAGE-AGTCIS 296 (297)
T ss_pred -cCCCCcHHHHHHHHHHHHhCCCeEEECC---hhHHHHHHCCC-CCeEEe
Confidence 24899999999999988865 5588875 67778888887 699874
No 170
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=99.92 E-value=1.1e-24 Score=222.57 Aligned_cols=205 Identities=15% Similarity=0.125 Sum_probs=151.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
|+++|+.|+..|.++||||||||+++.... +. ++...+. ............+-...+++.|+.+..
T Consensus 56 l~~dla~L~~lGl~~VlVHGggp~i~~~l~--~~----~~~~~~~--------v~~~~n~~Lv~~L~~~G~~A~gl~g~~ 121 (271)
T cd04236 56 LSFGLAFLQRMDMKLLVVMGLSAPDGTNMS--DL----ELQAARS--------RLVKDCKTLVEALQANSAAAHPLFSGE 121 (271)
T ss_pred HHHHHHHHHHCCCeEEEEeCCChHHhhhhc--CC----cchheeh--------hHHHHHHHHHHHHHhCCCCeeeecCcc
Confidence 789999999999999999999999987433 22 1222111 111222211111111223333333221
Q ss_pred EEec-----ccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhHHHHHHHHHcCCCeEee
Q 005798 82 LLVT-----DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVL 155 (676)
Q Consensus 82 ~l~~-----~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~l~Ad~li~ 155 (676)
.+++ +..+.+..+.+| .+.|+.+|+.|+|||+++ ++.+. +|..+ +|+|.+|+.+|.+|+|++|+|
T Consensus 122 ~~i~a~~~~d~g~vG~V~~Vd-~~~I~~lL~~g~IPVisp---lg~~~-----~G~~~NiNaD~~A~~lA~aL~A~KLIf 192 (271)
T cd04236 122 SVLQAEEPEPGASKGPSVSVD-TELLQWCLGSGHIPLVCP---IGETS-----SGRSVSLDSSEVTTAIAKALQPIKVIF 192 (271)
T ss_pred ceEEEEEcccCCccceEEEEC-HHHHHHHHhCCCeEEECC---ceECC-----CCCEEEECHHHHHHHHHHHcCCCEEEE
Confidence 1221 223667777888 899999999999999998 33322 45556 999999999999999999999
Q ss_pred ccccCccccCCCCCCCCceeceeeh-hchHHHHhcCCCCcccccch---HHHHHHHHHHHHcCCcEEEEeCCCcchH-HH
Q 005798 156 LSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGM---TAKVNAAYCAACAGIPVVITSGFAMDSI-IK 230 (676)
Q Consensus 156 lTdVdGVy~~dP~~~~a~~i~~i~~-~e~~~~~~~g~~~~~~~ggM---~~K~~aa~~a~~~gv~v~I~~g~~~~~i-~~ 230 (676)
+||++|||++ ++++|++|+. +|+.+++..+ .++||| +||+++|..++..|+.|+|++ ++.+ .+
T Consensus 193 ltd~~GV~~~-----~g~lI~~l~~~~e~~~li~~g----~i~gGm~~ki~ki~~~l~~l~~g~sv~I~~---~~~ll~e 260 (271)
T cd04236 193 LNRSGGLRDQ-----KHKVLPQVHLPADLPSLSDAE----WLSETEQNRIQDIATLLNALPSMSSAVITS---AETLLTE 260 (271)
T ss_pred EeCCcceECC-----CCCCccccCcHHHHHHHHhCC----EEcCCeeechHHHHHHHHhcccCCeEEEeC---hHHHHHH
Confidence 9999999975 3789999995 8888888765 899999 999999999999999999998 7776 88
Q ss_pred HHhCCceeeEE
Q 005798 231 VLEGKRVGTLF 241 (676)
Q Consensus 231 ~~tg~~iGT~i 241 (676)
+++.+..||.+
T Consensus 261 lft~~g~GT~~ 271 (271)
T cd04236 261 LFSHKGSGTLF 271 (271)
T ss_pred HhccCCCCCcC
Confidence 99998889863
No 171
>PRK00358 pyrH uridylate kinase; Provisional
Probab=99.92 E-value=4.9e-24 Score=216.29 Aligned_cols=199 Identities=20% Similarity=0.247 Sum_probs=144.5
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHh-HHh--cccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVG-RQR--LRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~-~~~--l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
++++|+++++.|+++|||||||.... ... .++.. ..++. .+++.+.++.. ++...|..+|++
T Consensus 28 ~~~~i~~~~~~g~~vvlV~gGG~~a~~~~~~~~~~~~------~~~~~------~~~~~~~l~~~---ll~~~l~~~Gi~ 92 (231)
T PRK00358 28 IAEEIKEVVELGVEVAIVVGGGNIFRGYIGAAAGMDR------ATADY------MGMLATVMNAL---ALQDALERAGVD 92 (231)
T ss_pred HHHHHHHHHHCCCeEEEEECCCHHHHHHHHhhcCCCh------hhHHH------HHHHHHHHHHH---HHHHHHHHcCCC
Confidence 68899999999999999999975322 111 12110 01111 22334444432 456889999987
Q ss_pred cceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccc
Q 005798 79 SSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSD 158 (676)
Q Consensus 79 ~~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTd 158 (676)
.. +++...+.......+ .+.+..+|++|.|||+++. .+..+.++|++|+++|.+|+||+|+|+||
T Consensus 93 a~--~~~~~~~~~~~~~~~-~~~~~~~l~~g~vPVv~g~------------~~~~~~ssD~~A~~lA~~l~A~~li~~td 157 (231)
T PRK00358 93 TR--VQSAIPMPQVAEPYI-RRRAIRHLEKGRVVIFAAG------------TGNPFFTTDTAAALRAEEIGADVLLKATN 157 (231)
T ss_pred eE--EechhhcccccCccc-HHHHHHHHHCCCEEEEECC------------CCCCCCCchHHHHHHHHHcCCCEEEEeeC
Confidence 64 222111111111112 3456789999999999751 22335899999999999999999999999
Q ss_pred cCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCce
Q 005798 159 VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRV 237 (676)
Q Consensus 159 VdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~i 237 (676)
|||||++||+ +|++++|++|+++|+.+. |....|++++..|.++|++++|+||++|++|.++++|+..
T Consensus 158 VdGVy~~dP~~~~~a~~i~~i~~~e~~~~-----------g~~~~d~~a~~~a~~~~i~v~I~~g~~~~~l~~~l~g~~~ 226 (231)
T PRK00358 158 VDGVYDADPKKDPDAKKYDRLTYDEVLEK-----------GLKVMDATAISLARDNKIPIIVFNMNKPGNLKRVVKGEHI 226 (231)
T ss_pred cCceEcCCCCCCCCCEEeeEecHHHHHHc-----------CCcchhHHHHHHHHHcCCcEEEECCCCchHHHHHHCCCCC
Confidence 9999999995 899999999999876531 2234688999999999999999999999999999999989
Q ss_pred eeEE
Q 005798 238 GTLF 241 (676)
Q Consensus 238 GT~i 241 (676)
||++
T Consensus 227 GT~i 230 (231)
T PRK00358 227 GTLV 230 (231)
T ss_pred CEEe
Confidence 9987
No 172
>PRK14558 pyrH uridylate kinase; Provisional
Probab=99.91 E-value=1.4e-23 Score=212.82 Aligned_cols=195 Identities=23% Similarity=0.342 Sum_probs=148.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCChh-HHhHHhcccccccccccccccCccccchhhHHHhccHHH--HH-HHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAV-GVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSS--LM-ALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~-~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~--~~-~~~~~~l~~~g~ 77 (676)
++++|+++++.|+++|||||||. +.|+...++.. .....+|+.. +. .++...|..+|+
T Consensus 28 la~~i~~~~~~g~~viiV~GgGs~~~g~~~~~~~~------------------~~~d~ig~~~~~ln~~~~~~~l~~~gi 89 (231)
T PRK14558 28 LVNEIKSVVEYGFKIGIVIGAGNLFRGVELKELSP------------------TRADQIGMLGTVINALYLKDIFEKSGL 89 (231)
T ss_pred HHHHHHHHHHCCCeEEEEECccHHHHHHhccCCCh------------------HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 68899999999999999997763 34443222211 1223345532 22 246899999998
Q ss_pred cc---ceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEe
Q 005798 78 TS---SQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLV 154 (676)
Q Consensus 78 ~~---~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li 154 (676)
+. .|++. ..++. ..+ .+.+..+|+.|.|||++|+. +..++++|++|+++|..|+||.|+
T Consensus 90 ~a~~~~~~~~-~~~~~----~~~-~~~i~~ll~~g~vpV~~G~~------------~~~~~~~D~~a~~lA~~l~a~~l~ 151 (231)
T PRK14558 90 KAVIVSQIVN-LPSVE----PIN-YDDIELYFRAGYIVIFAGGT------------SNPFFTTDTAAALRAVEMKADILI 151 (231)
T ss_pred CeEEeccccc-cchhh----hhh-HHHHHHHHHCCCEEEEECCC------------CCCCCCcHHHHHHHHHHcCCCEEE
Confidence 74 34332 22221 122 57889999999999999842 124688999999999999999999
Q ss_pred eccccCccccCCC-CCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHh
Q 005798 155 LLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 233 (676)
Q Consensus 155 ~lTdVdGVy~~dP-~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~t 233 (676)
++|||||||++|| ++|++++|++|+++|+.+. + ... .+.+++..|.++|++|+|+||++++.+.+++.
T Consensus 152 ~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g------~~~--~d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l~ 220 (231)
T PRK14558 152 KATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---G------LKV--MDTEAFSICKKYGITILVINFFEPGNLLKALK 220 (231)
T ss_pred EEecCCeeEccCCCCCCCCeEcccccHHHHHHc---C------ccc--ccHHHHHHHHHCCCCEEEEeCCCCCHHHHHHC
Confidence 9999999999999 4899999999999887642 2 122 36778999999999999999999999999999
Q ss_pred CCceeeEEec
Q 005798 234 GKRVGTLFHR 243 (676)
Q Consensus 234 g~~iGT~i~~ 243 (676)
|+..||++.+
T Consensus 221 g~~~GT~i~~ 230 (231)
T PRK14558 221 GENVGTLVVP 230 (231)
T ss_pred CCCCcEEeCC
Confidence 9999999865
No 173
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=99.91 E-value=9.6e-24 Score=208.87 Aligned_cols=228 Identities=22% Similarity=0.284 Sum_probs=170.1
Q ss_pred HHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHH--HHHHHHHHhhhCCCc--
Q 005798 3 CLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSS--LMALYDTLFSQLDVT-- 78 (676)
Q Consensus 3 ~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~--~~~~~~~~l~~~g~~-- 78 (676)
+++|+.|..+|+++||+||+|||+|...++.....+ ..+... ..|..+.+.+.|+.+ +...+.+.|..+++.
T Consensus 32 a~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~--~~~~p~--~PLd~~~AmsQG~IGy~l~qal~n~l~~~~~~~~ 107 (312)
T COG0549 32 AEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADS--EKGVPA--YPLDVLVAMSQGMIGYMLQQALRNELPRRGLEKP 107 (312)
T ss_pred HHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhcc--ccCCCC--ccHHHHhHhhhhHHHHHHHHHHHHHHhhcCCCCc
Confidence 678999999999999999999999986555433100 001110 123446667777777 447788889888863
Q ss_pred ----cceEEecccc--cCchhH----------------------------------------hhhHHHHHHHHHhCCCee
Q 005798 79 ----SSQLLVTDSD--FRDEDF----------------------------------------RKQLYDTVQSLLDLRVIP 112 (676)
Q Consensus 79 ----~~q~l~~~~d--~~~~~~----------------------------------------~~~~~~~i~~ll~~g~iP 112 (676)
.+|+.+..+| |.++.+ .+-..+.|+.|+++|.++
T Consensus 108 v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vV 187 (312)
T COG0549 108 VVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAGRGYRRVVPSPKPVRIVEAEAIKALLESGHVV 187 (312)
T ss_pred eeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEEEecCCCCeeEecCCCCCccchhHHHHHHHHhCCCEE
Confidence 3466776655 443211 111268999999999999
Q ss_pred EEcCCCceecCCCCCCCCC-ceecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCC
Q 005798 113 IFNENDAVSTRKAPYEDSS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 191 (676)
Q Consensus 113 Vi~~~d~v~~~~~~~~~~~-~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~ 191 (676)
|.+|.+.|...+-.+.-.| ..++|.|.++++||..++||.|+|+||||+||.++- .|+.+.|++++.+|+++++..+
T Consensus 188 I~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd~Vy~n~g-kp~q~~L~~v~~~e~~~yl~eg- 265 (312)
T COG0549 188 IAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVDAVYVNFG-KPNQQALDRVTVDEMEKYLAEG- 265 (312)
T ss_pred EEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEEEeccchheecCC-CccchhhcccCHHHHHHHHhcC-
Confidence 9988666655321000001 125999999999999999999999999999998864 6788999999999999988764
Q ss_pred CCcccccchHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHhCCceeeEEe
Q 005798 192 KSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLFH 242 (676)
Q Consensus 192 ~~~~~~ggM~~K~~aa~~a~~~gv~-v~I~~g~~~~~i~~~~tg~~iGT~i~ 242 (676)
.|..|+|.||++||+.+.+++-+ ++|.+ .+++.+++.|+ .||.|.
T Consensus 266 --~Fa~GSM~PKVeAai~Fv~~~gk~A~Its---Le~~~~~l~g~-~GT~I~ 311 (312)
T COG0549 266 --QFAAGSMGPKVEAAISFVENTGKPAIITS---LENAEAALEGK-AGTVIV 311 (312)
T ss_pred --CCCCCCccHHHHHHHHHHHcCCCceEECc---HHHHHHHhccC-CCcEec
Confidence 58999999999999999998544 88887 77888888887 699875
No 174
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=99.91 E-value=1e-23 Score=215.36 Aligned_cols=201 Identities=15% Similarity=0.207 Sum_probs=153.0
Q ss_pred HHHHHHHHHHCCCeEEEEe-----CChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCC
Q 005798 2 ICLQLKELNSQGFEIILVS-----SGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLD 76 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVh-----gGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g 76 (676)
++++|+.+++.|+++|||| ||++++...+++..... ..+.+.. .++.+.++|+..++..+...|+++|
T Consensus 20 ~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~-----~~~~t~~--~~~~~~~~Ge~~~~~~~~~~l~~~G 92 (244)
T cd04260 20 VAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE-----NSDISPR--ELDLLMSCGEIISAVVLTSTLRAQG 92 (244)
T ss_pred HHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh-----cCCCCHH--HHHHHHHHhHHHHHHHHHHHHHhCC
Confidence 7899999999999988888 56676665443332110 1222221 2457788999998889999999999
Q ss_pred CccceE------EecccccCc-hhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCc-e---ecchhHHHHHHH
Q 005798 77 VTSSQL------LVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-I---FWDNDSLAGLLA 145 (676)
Q Consensus 77 ~~~~q~------l~~~~d~~~-~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~-~---~~~~D~~A~~lA 145 (676)
+++.++ +++.++|.. .....| .+.+..+|+.|+|||++|. . +.++ ++. . ++++|++|+.+|
T Consensus 93 i~a~~l~~~~~~lit~~~~~~~~v~~~~-~~~l~~ll~~g~VPVv~g~-~-~~~~-----~g~~~~l~rg~sD~~A~~lA 164 (244)
T cd04260 93 LKAVALTGAQAGILTDDNYSNAKIIKVN-PKKILSALKEGDVVVVAGF-Q-GVTE-----DGEVTTLGRGGSDTTAAALG 164 (244)
T ss_pred CCeEEechHHcCEEecCCCCceeeeccC-HHHHHHHHhCCCEEEecCC-c-ccCC-----CCCEEEeCCCchHHHHHHHH
Confidence 987766 567666643 234455 6779999999999999872 1 1111 222 2 248999999999
Q ss_pred HHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCC
Q 005798 146 LELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFA 224 (676)
Q Consensus 146 ~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~ 224 (676)
.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++...|++ +.|..|+..+.++|++++|.|+++
T Consensus 165 ~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~g~~--------v~~~~a~~~~~~~~i~v~I~~~~~ 236 (244)
T cd04260 165 AALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQGAK--------VIHPRAVEIAMQANIPIRIRSTMS 236 (244)
T ss_pred HHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHcCch--------hcCHHHHHHHHHcCCeEEEecCCC
Confidence 99999999999999999999995 789999999999999876654422 467789999999999999999887
Q ss_pred c
Q 005798 225 M 225 (676)
Q Consensus 225 ~ 225 (676)
+
T Consensus 237 ~ 237 (244)
T cd04260 237 E 237 (244)
T ss_pred C
Confidence 5
No 175
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=99.91 E-value=7.2e-24 Score=215.09 Aligned_cols=196 Identities=26% Similarity=0.329 Sum_probs=141.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCcccc-chhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNE-LDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~-l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
++++|+.|+..|.++|||||||+++.. +.+++..+.. ..++.++.+ +.....+..|+.. ..+...|.++|++
T Consensus 18 ~~~~i~~l~~~g~~~VlVhggg~~~~~~~~~~~~~~~~~---~g~r~t~~~~~~~~~~~~~g~~~--~~i~~~L~~~G~~ 92 (231)
T TIGR00761 18 FASDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFK---NGLRVTDKETLEVVEMVLIGQVN--KELVALLNKHGIN 92 (231)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcHHHHHHHHHcCCCCEec---CCCccCCHHHHHHHHHHHhcchH--HHHHHHHHhCCCC
Confidence 689999999999999999999987664 3455443221 234544321 1111222244322 3344578888876
Q ss_pred cceE------Eecccc-------cCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCc-eecchhHHHHHH
Q 005798 79 SSQL------LVTDSD-------FRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLL 144 (676)
Q Consensus 79 ~~q~------l~~~~d-------~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~-~~~~~D~~A~~l 144 (676)
+.++ +++... +.+..+..+ .+.|+.+|++|+|||++| . +.+. +|. .++|+|++|+.+
T Consensus 93 a~~l~~~~~~~it~~~~~~~~~~~~g~i~~i~-~~~i~~~l~~g~IPVi~~-~--~~~~-----~g~~~~l~sD~~A~~l 163 (231)
T TIGR00761 93 AIGLTGGDGQLFTARSLDKEDLGYVGEIKKVN-KALLEALLKAGYIPVISS-L--ALTA-----EGQALNVNADTAAGAL 163 (231)
T ss_pred cccccCCCCCEEEEEECCCccCCcccceEEEc-HHHHHHHHHCCCeEEECC-C--ccCC-----CCcEEEeCHHHHHHHH
Confidence 5433 343321 334455666 789999999999999998 2 2221 333 349999999999
Q ss_pred HHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc-EEE
Q 005798 145 ALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVI 219 (676)
Q Consensus 145 A~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~-v~I 219 (676)
|.+|+||+|+|+|||||||++|| +++|++|+++|+.+++..+ +++|||.+|+++|..|.+.|++ +||
T Consensus 164 A~~l~A~~li~ltdv~Gv~~~d~----~~~i~~i~~~e~~~l~~~~----~~tggm~~Kl~~a~~a~~~gv~~v~i 231 (231)
T TIGR00761 164 AAALGAEKLVLLTDVPGILNGDG----QSLISEIPLEEIEQLIEQG----IITGGMIPKVNAALEALRGGVKSVHI 231 (231)
T ss_pred HHHcCCCEEEEEECCCCeecCCC----CeeccccCHHHHHHHHHcC----CCCCchHHHHHHHHHHHHcCCCEEEC
Confidence 99999999999999999999876 4799999999888766543 6899999999999999999998 665
No 176
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.91 E-value=1.1e-23 Score=215.57 Aligned_cols=208 Identities=18% Similarity=0.213 Sum_probs=147.5
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++++. +++++||||||... +......... .+.. .-..++++++.++..++. +..|..+|++.
T Consensus 53 la~~i~~~~~-~~~vilV~GGG~~~-r~~~~~~~~~-----g~~~--~~~~~~~~aa~~ln~lv~--~~~l~~~g~~~-- 119 (262)
T cd04255 53 LVEEIVALRP-EHKLLILTGGGTRA-RHVYSIGLDL-----GMPT--GVLAKLGASVSEQNAEML--ATLLAKHGGSK-- 119 (262)
T ss_pred HHHHHHHHhC-CCcEEEEECCHHHH-HHHHHHHHHc-----CCCc--hHHHHHHHHHHHHHHHHH--HHHHHHcCCCc--
Confidence 6788888876 69999999999743 3211100000 1110 012245777788866433 56677777753
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCC-ceecchhHHHHHHHHHcCCCeEeeccccC
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS-GIFWDNDSLAGLLALELKADLLVLLSDVE 160 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~-~~~~~~D~~A~~lA~~l~Ad~li~lTdVd 160 (676)
++..+ .+.+..+|+.|+|||++|++.+...++.+. .+ ..++|+|++|+++|.+|+||.|+++||||
T Consensus 120 --i~~~~----------~~~l~~lL~~g~vPVi~g~~~~~~~~i~~~-~g~~~~~~~D~~Aa~lA~~l~ad~li~~TdVd 186 (262)
T cd04255 120 --VGHGD----------LLQLPTFLKAGRAPVISGMPPYGLWEHPAE-EGRIPPHRTDVGAFLLAEVIGARNLIFVKDED 186 (262)
T ss_pred --ccccc----------HHHHHHHHHCCCeEEEeCCcCCCeeeecCC-CccCCCCCcHHHHHHHHHHhCCCEEEEEeccC
Confidence 23222 235788999999999999865544332221 22 34699999999999999999999999999
Q ss_pred ccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceee
Q 005798 161 GLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 239 (676)
Q Consensus 161 GVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT 239 (676)
|||++||+ +|++++|++|+++++.+....+ ...+++|..|++++. ..++++|+||+.++.+.+++.|+..||
T Consensus 187 GVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~---~~~~~~~~~~l~aa~----~~~~v~I~~g~~~~~L~~~l~g~~~GT 259 (262)
T cd04255 187 GLYTADPKKNKKAEFIPEISAAELLKKDLDD---LVLERPVLDLLQNAR----HVKEVQIVNGLVPGNLTRALRGEHVGT 259 (262)
T ss_pred eeECCCCCCCCCCeEccEeCHHHHHHHhcCC---CCCcHHHHHHHHHhC----CCCcEEEEeCCCCCHHHHHHcCCCCce
Confidence 99999994 7999999999998776432111 124788888877653 235899999999999999999998999
Q ss_pred EEe
Q 005798 240 LFH 242 (676)
Q Consensus 240 ~i~ 242 (676)
++.
T Consensus 260 ~i~ 262 (262)
T cd04255 260 IIR 262 (262)
T ss_pred EeC
Confidence 873
No 177
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=99.91 E-value=1.7e-23 Score=211.91 Aligned_cols=201 Identities=20% Similarity=0.243 Sum_probs=146.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhH-HhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVG-VGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS 80 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~-i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~ 80 (676)
++++|+++++.|++++||||||.. -+...+...-.. ..+. .++...+.++. .+++..|..+|+++.
T Consensus 26 ~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~~~~~----~~~~------~~~~~~~~l~~---~l~~~~l~~~Gi~a~ 92 (229)
T cd04239 26 IAREIKEVVDLGVEVAIVVGGGNIARGYIAAARGMPR----ATAD------YIGMLATVMNA---LALQDALEKLGVKTR 92 (229)
T ss_pred HHHHHHHHHHCCCEEEEEECCChHHhhHHHhhcCCCh----hhHH------HHHHHHHHHHH---HHHHHHHHHcCCCEE
Confidence 678888888899999999997653 222111111000 0111 02233333333 344688999998865
Q ss_pred eEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccC
Q 005798 81 QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVE 160 (676)
Q Consensus 81 q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVd 160 (676)
++ +..++.......+ .+.+..+++.|.|||+++. .|..+.++|++|+.+|.+|+||+|+|+||||
T Consensus 93 ~~--~~~~~~~~~~~~~-~~~l~~~l~~g~ipVi~g~------------~g~~~~~sD~~A~~lA~~l~a~~li~~tdVd 157 (229)
T cd04239 93 VM--SAIPMQGVAEPYI-RRRAIRHLEKGRIVIFGGG------------TGNPGFTTDTAAALRAEEIGADVLLKATNVD 157 (229)
T ss_pred Ee--CHHHHhhhhcccc-HHHHHHHHhCCCEEEEeCc------------cCCCCCCcHHHHHHHHHHcCCCEEEEEECCC
Confidence 42 2222222112234 5678999999999999972 2234578999999999999999999999999
Q ss_pred ccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceee
Q 005798 161 GLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 239 (676)
Q Consensus 161 GVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT 239 (676)
|||++||+ +|++++|++|+++|+.++.. |..|+.++..+.+.|++++|+||+.++++.++++|+..||
T Consensus 158 Gvy~~dP~~~~~a~~i~~i~~~e~~~~~~-----------~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~g~~~GT 226 (229)
T cd04239 158 GVYDADPKKNPDAKKYDRISYDELLKKGL-----------KVMDATALTLCRRNKIPIIVFNGLKPGNLLRALKGEHVGT 226 (229)
T ss_pred cccCCCCCCCCCCeEEeEEcHHHHHHHhc-----------CCccHHHHHHHHHCCCeEEEECCCChhHHHHHHcCCCCCe
Confidence 99999995 89999999999988764221 4567788888999999999999999999999999988899
Q ss_pred EE
Q 005798 240 LF 241 (676)
Q Consensus 240 ~i 241 (676)
++
T Consensus 227 ~i 228 (229)
T cd04239 227 LI 228 (229)
T ss_pred Ee
Confidence 86
No 178
>PRK08841 aspartate kinase; Validated
Probab=99.91 E-value=2.6e-23 Score=225.14 Aligned_cols=213 Identities=21% Similarity=0.249 Sum_probs=161.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCcc--
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTS-- 79 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~-- 79 (676)
++++|+.+++.|+++||||||+.+.+..++++..... .. ++ +...+++.+.|+..++.++...|+..|++.
T Consensus 22 va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~~----~~--~~-~~~~d~l~s~GE~~s~~lla~~L~~~Gi~a~~ 94 (392)
T PRK08841 22 VAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQVD----SV--PT-ARELDVLLSAGEQVSMALLAMTLNKLGYAARS 94 (392)
T ss_pred HHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhhc----cC--CC-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 6788999999999999999999888887766544321 11 11 113568899999999999999999999864
Q ss_pred ---ceE-EecccccC-chhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEe
Q 005798 80 ---SQL-LVTDSDFR-DEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLV 154 (676)
Q Consensus 80 ---~q~-l~~~~d~~-~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li 154 (676)
.|. +++++.+. ......+ .+.|..+++.|.|||++|.-+.... +.-....++++|++|+++|.+|+||.|+
T Consensus 95 l~~~~~~i~t~~~~~~~~i~~~~-~~~i~~ll~~~~vpVv~Gf~g~~~~---g~~ttlgrggsD~tAa~lA~~L~Ad~l~ 170 (392)
T PRK08841 95 LTGAQANIVTDNQHNDATIKHID-TSTITELLEQDQIVIVAGFQGRNEN---GDITTLGRGGSDTTAVALAGALNADECQ 170 (392)
T ss_pred EehhHcCEEecCCCCCceechhh-HHHHHHHHhCCCEEEEeCCcccCCC---CCEEEeCCCChHHHHHHHHHHcCCCEEE
Confidence 343 55555453 2233333 6889999999999999873111110 0001123479999999999999999999
Q ss_pred eccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHh
Q 005798 155 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 233 (676)
Q Consensus 155 ~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~t 233 (676)
+||||||||++||+ +|++++|++|+|+|+.++.. .|.++.+++++..|.++|||++|.|++++.
T Consensus 171 i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~--------~Ga~vlhp~ai~~a~~~~Ipi~i~n~~~~~------- 235 (392)
T PRK08841 171 IFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMAR--------KGAKVLHLPSVQHAWKHSVPLRVLSSFEVG------- 235 (392)
T ss_pred EEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHh--------cCccccCHHHHHHHHHCCCeEEEEecCCCC-------
Confidence 99999999999995 89999999999999987544 355677889999999999999999987642
Q ss_pred CCceeeEEec
Q 005798 234 GKRVGTLFHR 243 (676)
Q Consensus 234 g~~iGT~i~~ 243 (676)
.||+|..
T Consensus 236 ---~GT~I~~ 242 (392)
T PRK08841 236 ---EGTLIKG 242 (392)
T ss_pred ---CCeEEEe
Confidence 3888853
No 179
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=99.90 E-value=2.1e-22 Score=204.27 Aligned_cols=200 Identities=20% Similarity=0.269 Sum_probs=146.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhH-HhH--HhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVG-VGR--QRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~-i~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
++++|+++...|+++|||||||.. .+. ..+++... .. +.+.+.++.....++...|...|++
T Consensus 29 ~a~~i~~~~~~~~~vviV~G~Gs~~~~~~a~~~~~~~~------~~---------d~~g~~~~~l~~~l~~~~L~~~Gi~ 93 (233)
T TIGR02075 29 IANEIKELVKMGIEVGIVIGGGNIFRGVSAKELGIDRV------TA---------DYMGMLATVINGLALRDALEKLGVK 93 (233)
T ss_pred HHHHHHHHHhCCCeEEEEECCCHHHHHHHHHhcCCCCc------cH---------HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 678888888889999999999742 132 22222110 01 1223333333333457889999987
Q ss_pred cceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccc
Q 005798 79 SSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSD 158 (676)
Q Consensus 79 ~~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTd 158 (676)
. ..++..++. +.......+.++.+|+.|+|||+++. .|..++++|++|+++|..|+||.|+|+||
T Consensus 94 a--~~l~~~~~~-~~~~~~~~~~i~~ll~~g~VpV~~g~------------~g~~~~s~D~~a~~lA~~l~a~~li~~td 158 (233)
T TIGR02075 94 T--RVLSAISMP-QICESYIRRKAIKHLEKGKVVIFSGG------------TGNPFFTTDTAAALRAIEINADVILKGTN 158 (233)
T ss_pred c--EEeccccCC-CCccccCHHHHHHHHHCCCEEEEECC------------CCCCCCCchHHHHHHHHHcCCCEEEEeec
Confidence 5 344444433 11111115788889999999999752 22346899999999999999999999999
Q ss_pred -cCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCc
Q 005798 159 -VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKR 236 (676)
Q Consensus 159 -VdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~ 236 (676)
|||||++||+ +|++++|++++++|+.+. + .. ..+++++..|.++|++++|+||.+|++|.+++.|+.
T Consensus 159 ~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~------~~--~~d~~~~~~a~~~~i~v~i~~g~~~~~l~~~l~g~~ 227 (233)
T TIGR02075 159 GVDGVYTADPKKNKDAKKYETITYNEALKK---N------LK--VMDLTAFALARDNNLPIVVFNIDEPGALKKVILGKG 227 (233)
T ss_pred ccCeEEcCCCCCCCCCeECcEecHHHHHhc---C------HH--HHHHHHHHHHHHCCCeEEEEeCCCcchHHHHHCCCC
Confidence 9999999995 899999999999887531 1 11 357889999999999999999999999999999999
Q ss_pred eeeEEe
Q 005798 237 VGTLFH 242 (676)
Q Consensus 237 iGT~i~ 242 (676)
.||++.
T Consensus 228 ~GT~i~ 233 (233)
T TIGR02075 228 IGTLVS 233 (233)
T ss_pred CCEEeC
Confidence 999873
No 180
>PRK14556 pyrH uridylate kinase; Provisional
Probab=99.89 E-value=3.4e-22 Score=200.59 Aligned_cols=204 Identities=18% Similarity=0.170 Sum_probs=146.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccc-
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS- 80 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~- 80 (676)
++++|+++++.|++|.||.|||.- -+ +...... .++..+..+ .+.+++++-+.. ++...|.+.|++..
T Consensus 43 ~a~~i~~~~~~g~~i~iVvGGGni-~R---g~~~~~~---~~~~r~~~D-~~GmlaT~iNal---~l~~~l~~~~~~~~v 111 (249)
T PRK14556 43 IINQIKTLTNFGVELALVVGGGNI-LR---GGRANFG---NKIRRATAD-SMGMIATMINAL---ALRDMLISEGVDAEV 111 (249)
T ss_pred HHHHHHHHHhCCcEEEEEECCCHH-Hh---Cchhhcc---CCCchhhhh-HHHHHHHHHHHH---HHHHHHHHcCCCeEE
Confidence 789999999999999999999841 11 1111100 011111100 134556665554 45588898998743
Q ss_pred eEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccC
Q 005798 81 QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVE 160 (676)
Q Consensus 81 q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVd 160 (676)
+.-+....+.. .+ + .+.+...|+.|.|+|+.+ . .|.++++||++|+++|..++||.|+++||||
T Consensus 112 ~sa~~~~~~~e--~~-~-~~~~~~~l~~g~vvi~~g-----g-------~G~p~~StD~lAallA~~l~Ad~Lii~TdVD 175 (249)
T PRK14556 112 FSAKGVDGLLK--VA-S-AHEFNQELAKGRVLIFAG-----G-------TGNPFVTTDTTASLRAVEIGADALLKATTVN 175 (249)
T ss_pred eeccccCcCCC--CC-C-HHHHHHHHhCCCEEEEEC-----C-------CCCCcCCcHHHHHHHHHHcCCCEEEEEeCCC
Confidence 11111122222 22 3 445556789999999876 1 3346799999999999999999999999999
Q ss_pred ccccCCC-CCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceee
Q 005798 161 GLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 239 (676)
Q Consensus 161 GVy~~dP-~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT 239 (676)
|||++|| ++|++++|++|+++|..+ .+ .. ..+..++..|.++|+|++|+|+++|++|.+++.|+..||
T Consensus 176 GVYd~DP~~~p~A~~i~~I~~~e~~~---~~------l~--vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~Ge~~GT 244 (249)
T PRK14556 176 GVYDKDPNKYSDAKRFDKVTFSEVVS---KE------LN--VMDLGAFTQCRDFGIPIYVFDLTQPNALVDAVLDSKYGT 244 (249)
T ss_pred ccCCCCCCCCCCceEeeEEchhhhcc---cc------hH--hHHHHHHHHHHHCCCcEEEECCCCchHHHHHHcCCCCce
Confidence 9999999 599999999999988753 11 11 345678999999999999999999999999999999999
Q ss_pred EEec
Q 005798 240 LFHR 243 (676)
Q Consensus 240 ~i~~ 243 (676)
++..
T Consensus 245 ~i~~ 248 (249)
T PRK14556 245 WVTL 248 (249)
T ss_pred EEEe
Confidence 9863
No 181
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=99.89 E-value=2.8e-22 Score=194.74 Aligned_cols=168 Identities=23% Similarity=0.332 Sum_probs=129.9
Q ss_pred HHHHHHHHhhhCCCccceE-EecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHH
Q 005798 64 LMALYDTLFSQLDVTSSQL-LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAG 142 (676)
Q Consensus 64 ~~~~~~~~l~~~g~~~~q~-l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~ 142 (676)
+.....+.|.+.|+.+... -.+..-|.++..+.. .+.+..+|+.|+|||+.| |.+..++ .+..++++|.++.
T Consensus 82 L~~~V~~~l~~~Gv~av~~~P~s~~~~~gr~~~~~-l~~i~~~l~~gfvPvl~G-DVv~d~~-----~g~~IiSGDdIv~ 154 (252)
T COG1608 82 LNSIVVDALLDAGVRAVSVVPISFSTFNGRILYTY-LEAIKDALEKGFVPVLYG-DVVPDDD-----NGYEIISGDDIVL 154 (252)
T ss_pred HHHHHHHHHHhcCCccccccCcceeecCCceeech-HHHHHHHHHcCCEeeeec-ceEEcCC-----CceEEEeccHHHH
Confidence 3445556777777654210 000001223333322 678999999999999998 7776532 4566799999999
Q ss_pred HHHHHcCCCeEeeccccCccccCCC-CCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEe
Q 005798 143 LLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITS 221 (676)
Q Consensus 143 ~lA~~l~Ad~li~lTdVdGVy~~dP-~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~ 221 (676)
.+|+.|++|+++|+|||||||++|| +.|+.+.++++..... ..|+.+.++||||..|++++....+++.+|+|+|
T Consensus 155 ~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~----~~gs~~~DVTGGi~~Kl~~~~~~~~~~~~vyi~n 230 (252)
T COG1608 155 HLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVA----LGGSGGTDVTGGIAKKLEALLEIARYGKEVYIFN 230 (252)
T ss_pred HHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhh----hcCcCcccchhhHHHHHHHHHHHHhcCceEEEEC
Confidence 9999999999999999999999999 4888888777654321 2455557999999999999999999999999999
Q ss_pred CCCcchHHHHHhCCceeeEEe
Q 005798 222 GFAMDSIIKVLEGKRVGTLFH 242 (676)
Q Consensus 222 g~~~~~i~~~~tg~~iGT~i~ 242 (676)
|+.|++|..++.|+.+||.+.
T Consensus 231 g~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 231 GNKPENIYRALRGENVGTRID 251 (252)
T ss_pred CCCHHHHHHHhcCCCCceEec
Confidence 999999999999999999875
No 182
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases.
Probab=99.89 E-value=2.1e-22 Score=221.08 Aligned_cols=216 Identities=20% Similarity=0.241 Sum_probs=160.5
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|+.+++.|+++||||||+..++..++++.... + .-+.++ ...+.+.+.|+..+..++...|+++|+++.+
T Consensus 21 ~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~---~-~~~~~~--~~~~~i~~~Ge~~s~~~~~~~l~~~g~~a~~ 94 (401)
T TIGR00656 21 AARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKA---I-RDAITP--RERDELVSHGERLSSALFSGALRDLGVKAIW 94 (401)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHH---h-ccCCCh--HHHHHHhhHHHHHHHHHHHHHHHhCCCceEE
Confidence 688899999999999999999988887655443210 0 000111 1245788889988888899999999998766
Q ss_pred E------EecccccCc-hhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEe
Q 005798 82 L------LVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLV 154 (676)
Q Consensus 82 ~------l~~~~d~~~-~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li 154 (676)
+ +++..+|.+ .....+..+.+..+++.|.|||++|.-+.... +......++++|++|+.+|.+|+|++|+
T Consensus 95 l~~~~~~~~t~~~~~~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~~~~~---g~~~~lgrg~sD~~A~~lA~~l~A~~l~ 171 (401)
T TIGR00656 95 LDGGEAGIITDDNFGNAKIDIIATEERLLPLLEEGIIVVVAGFQGATEK---GYTTTLGRGGSDYTAALLAAALKADRVD 171 (401)
T ss_pred eccccceEEeCCCCCceEeeecchHHHHHHHHhCCCEEEecCcceeCCC---CCEeecCCCcHHHHHHHHHHHcCCCEEE
Confidence 5 455544432 22233323789999999999999872111110 0001122468999999999999999999
Q ss_pred eccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHh
Q 005798 155 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 233 (676)
Q Consensus 155 ~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~t 233 (676)
|||||||||++||+ +|++++|++|+++|+.++...| ..+.+.+++..|.++++|++|.|+++|+
T Consensus 172 i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~G--------~~v~~~~a~~~a~~~~i~i~i~~~~~~~------- 236 (401)
T TIGR00656 172 IYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATFG--------AKVLHPRTVEPAMRSGVPIEVRSSFDPE------- 236 (401)
T ss_pred EEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHcC--------CcccCHHHHHHHHHCCCeEEEEECCCCC-------
Confidence 99999999999995 7999999999999999866543 3367788999999999999999998874
Q ss_pred CCceeeEEecC
Q 005798 234 GKRVGTLFHRD 244 (676)
Q Consensus 234 g~~iGT~i~~~ 244 (676)
.||+|...
T Consensus 237 ---~gT~I~~~ 244 (401)
T TIGR00656 237 ---EGTLITNS 244 (401)
T ss_pred ---CCeEEEeC
Confidence 38888654
No 183
>PRK14557 pyrH uridylate kinase; Provisional
Probab=99.89 E-value=9.2e-22 Score=199.82 Aligned_cols=202 Identities=16% Similarity=0.184 Sum_probs=147.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhH-HhH--HhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhC-CC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVG-VGR--QRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQL-DV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~-i~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~-g~ 77 (676)
++++|+.+.+.|++|+||||||.. .|. +.+++ +.. ..+.+.+.|......++...|+.. +.
T Consensus 32 ~a~~i~~~~~~g~~vvVVvGgGn~~rg~~a~~~~~-----------~~~----~~D~ig~~g~~lna~ll~~~l~~~~~~ 96 (247)
T PRK14557 32 IANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGI-----------DRV----EADNIGTLGTIINSLMLRGVLTSKTNK 96 (247)
T ss_pred HHHHHHHHHHcCCeEEEEECCcHHHHHHHHHhcCC-----------ChH----HHHHHHHHHHHHHHHHHHHHHHhhhCC
Confidence 578899999999999999999731 121 11111 110 123556666666566666777764 33
Q ss_pred ccceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeec-
Q 005798 78 TSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLL- 156 (676)
Q Consensus 78 ~~~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~l- 156 (676)
... ++|+..+........ ...+...|+.|.|||+.+. .|..++++|++|+++|..++||.|+++
T Consensus 97 ~~~--i~t~~~~~~~~~~~~-~~~~~~~l~~g~VvV~~G~------------~g~~~~stD~lAallA~~l~Ad~li~~t 161 (247)
T PRK14557 97 EVR--VMTSIPFNAVAEPYI-RLRAVHHLDNGYIVIFGGG------------NGQPFVTTDYPSVQRAIEMNSDAILVAK 161 (247)
T ss_pred cee--EEeccccccccchhh-HHHHHHHHhCCCEEEEECC------------cCCCccChHHHHHHHHHHhCCCEEEEec
Confidence 221 555554443222222 2345566899999999861 233468899999999999999999999
Q ss_pred cccCccccCCC-CCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCC
Q 005798 157 SDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK 235 (676)
Q Consensus 157 TdVdGVy~~dP-~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~ 235 (676)
|||||||++|| ++|+|++|++|+++|+.. .+ ..-| ..+|+..|.++|++++|+||++|+.|.+++.|+
T Consensus 162 tdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~---~~------~~~~--~~~A~~~a~~~gi~v~I~ng~~~~~l~~~l~g~ 230 (247)
T PRK14557 162 QGVDGVFTSDPKHNKSAKMYRKLNYNDVVR---QN------IQVM--DQAALLLARDYNLPAHVFNFDEPGVMRRICLGE 230 (247)
T ss_pred CCcCEeECCCCCCCCCCEEeeEEChhhhcc---cC------HHHH--HHHHHHHHHHCCCcEEEEeCCCChHHHHHHcCC
Confidence 59999999999 599999999999887641 11 1123 456889999999999999999999999999999
Q ss_pred ceeeEEecC
Q 005798 236 RVGTLFHRD 244 (676)
Q Consensus 236 ~iGT~i~~~ 244 (676)
..||++.+.
T Consensus 231 ~~GT~i~~~ 239 (247)
T PRK14557 231 HVGTLINDD 239 (247)
T ss_pred CCcEEEecC
Confidence 999999876
No 184
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=99.88 E-value=7.1e-22 Score=200.21 Aligned_cols=200 Identities=19% Similarity=0.273 Sum_probs=145.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHH-hH--HhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGV-GR--QRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i-~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
++++|+++...|+++|||||||..+ +. ..++.. +.++ +.+...+......++...|...|++
T Consensus 28 ~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~~~----------~~~~-----d~~g~~~~~~n~~ll~~~L~~~Gv~ 92 (231)
T cd04254 28 IAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAGMD----------RATA-----DYMGMLATVINALALQDALESLGVK 92 (231)
T ss_pred HHHHHHHHHHCCCcEEEEECCCcccccchhhhcCCC----------chhh-----hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6788888888899999999998532 11 111111 1111 1222234444445677889999986
Q ss_pred cceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccc
Q 005798 79 SSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSD 158 (676)
Q Consensus 79 ~~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTd 158 (676)
.. .++..++.......+ .+.+..+|+.|+|||+++. .|...+++|++|+++|.+|+||+|+|+||
T Consensus 93 a~--~l~~~~~~~~~~~~~-~~~l~~~l~~g~ipV~~g~------------~G~~~~~~D~~a~~lA~~l~a~~l~~~td 157 (231)
T cd04254 93 TR--VMSAIPMQGVAEPYI-RRRAIRHLEKGRVVIFAGG------------TGNPFFTTDTAAALRAIEINADVILKATK 157 (231)
T ss_pred eE--EEcHHHhhhhhcccC-HHHHHHHHHCCCEEEEECC------------cCCCCCCcHHHHHHHHHHcCCCEEEEEeC
Confidence 53 222111111111223 5788999999999999851 12235799999999999999999999999
Q ss_pred cCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCce
Q 005798 159 VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRV 237 (676)
Q Consensus 159 VdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~i 237 (676)
|||||++||+ +|++++|++++++|+.+ .+ .. ..+++++..|.++|++++|+||++|++|.+++.|+..
T Consensus 158 VdGvy~~dp~~~~~a~~i~~i~~~~~~~---~~------~~--~~d~~a~~~a~~~gi~~~I~~g~~~~~l~~~l~g~~~ 226 (231)
T cd04254 158 VDGVYDADPKKNPNAKRYDHLTYDEVLS---KG------LK--VMDATAFTLCRDNNLPIVVFNINEPGNLLKAVKGEGV 226 (231)
T ss_pred CCEEEecCCCCCCCcEEeeEecHHHHHh---cc------hh--hhHHHHHHHHHHCCCeEEEEeCCCccHHHHHHCCCCC
Confidence 9999999995 89999999999988753 12 12 3588899999999999999999999999999999989
Q ss_pred eeEEe
Q 005798 238 GTLFH 242 (676)
Q Consensus 238 GT~i~ 242 (676)
||++.
T Consensus 227 GT~i~ 231 (231)
T cd04254 227 GTLIS 231 (231)
T ss_pred CEEeC
Confidence 99873
No 185
>PLN02825 amino-acid N-acetyltransferase
Probab=99.88 E-value=4.1e-22 Score=220.10 Aligned_cols=225 Identities=16% Similarity=0.198 Sum_probs=166.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCccccchhhHHHhccHHHH--HHHHH-----HHh
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSL--MALYD-----TLF 72 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~--~~~~~-----~~l 72 (676)
|++||+.|+..|+++||||||||+|.. +.++++++.. ..+|+|+.+.-.....+.|.... .+.++ ..|
T Consensus 37 l~~DialL~~lGi~~VlVHGggpqI~~~l~~~gi~~~f~---~G~RVTd~~~L~~~~~~~G~v~~~i~a~Ls~~~~v~~l 113 (515)
T PLN02825 37 ILQDISLLHGLGIKFVLVPGTHVQIDKLLAERGREPKYV---GAYRITDSAALQASMEAAGKIRVMIEAKLSPGPSIPNL 113 (515)
T ss_pred HHHHHHHHHHCCCCEEEEcCCCHHHHHHHHHcCCCceee---CCcccCCHHHHHHHHHHHHHHHHHHHHhhccccchhHH
Confidence 688999999999999999999999997 4666666431 45999885422224566676552 22221 134
Q ss_pred hhCCCcc----ceE-------Eec---------ccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCc
Q 005798 73 SQLDVTS----SQL-------LVT---------DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG 132 (676)
Q Consensus 73 ~~~g~~~----~q~-------l~~---------~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~ 132 (676)
+++|.+. ..+ +.. +-.|.+.++.+| .+.|+.+|+.|.|||+++ ++.+. +|.
T Consensus 114 ~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd-~~~i~~~L~~g~Ipvisp---lg~s~-----~Ge 184 (515)
T PLN02825 114 RRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKID-VSRIKERLDSNCIVLLSN---LGYSS-----SGE 184 (515)
T ss_pred HhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEc-HHHHHHHHhCCCeEEECC---ceECC-----CCC
Confidence 5555543 222 111 112457778888 899999999999999998 44432 666
Q ss_pred ee-cchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCC-------C------------
Q 005798 133 IF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD-------K------------ 192 (676)
Q Consensus 133 ~~-~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~-------~------------ 192 (676)
.| +|+|.+|+.+|.+|+||+|||+||++ ++++ ++++|++|+.+|+.+++..++ .
T Consensus 185 ~~NinaD~vA~avA~aL~A~KLI~ltd~~-~~~~-----~g~li~~l~~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 258 (515)
T PLN02825 185 VLNCNTYEVATACALAIGADKLICIVDGP-ILDE-----NGRLIRFMTLEEADMLIRKRAKQSEIAANYVKAVGGEDYSY 258 (515)
T ss_pred EEeeCHHHHHHHHHHHcCCCeEEEEeCcc-eecC-----CCCCcCcCCHHHHHHHHHhhhhcchhhhhhhhhcccccccc
Confidence 67 99999999999999999999999977 5544 368999999999887765310 0
Q ss_pred ------------------------------------C--------cc---------cccchHHHHHHHHHHHHcCCc-EE
Q 005798 193 ------------------------------------S--------RV---------GRGGMTAKVNAAYCAACAGIP-VV 218 (676)
Q Consensus 193 ------------------------------------~--------~~---------~~ggM~~K~~aa~~a~~~gv~-v~ 218 (676)
+ .+ .+.+...|+.+|..|++.||+ +|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~a~~~gv~r~h 338 (515)
T PLN02825 259 SLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGLSGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVQRVH 338 (515)
T ss_pred ccccccccccccccccccccccccccccccccccccCcccccccccccccchhhchhhhhHHHHHHHHHHHHHcCCCeEE
Confidence 0 00 112244579999999999998 99
Q ss_pred EEeCCCcchH-HHHHhCCceeeEEecC
Q 005798 219 ITSGFAMDSI-IKVLEGKRVGTLFHRD 244 (676)
Q Consensus 219 I~~g~~~~~i-~~~~tg~~iGT~i~~~ 244 (676)
++|++.++.| .+++|.+.+||.|..+
T Consensus 339 l~~~~~~gall~elft~dg~gt~i~~~ 365 (515)
T PLN02825 339 LLDGTIEGVLLLELFTRDGMGTMIASD 365 (515)
T ss_pred eccCCCCchHHHHhhccCCceeEeccC
Confidence 9999999998 8999999999999876
No 186
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=99.88 E-value=2.1e-22 Score=206.01 Aligned_cols=206 Identities=22% Similarity=0.302 Sum_probs=141.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCccc----cchhhHHHhccHHHHHHHHHHHhhhC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQN----ELDGKACAAVGQSSLMALYDTLFSQL 75 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~----~l~~~~~~avG~~~~~~~~~~~l~~~ 75 (676)
++++|+.+.+.|+++|||||||+++.. ...++..... ...+.++. ...+..+..+++..+...+...+..+
T Consensus 22 ~~~~i~~l~~~g~~vvvV~g~g~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 98 (242)
T PF00696_consen 22 LADDIALLSQLGIKVVVVHGGGSFTDELLEKYGIEPKFV---DGSRVTDIETGLIITMAAAAELNRDALLDEIVSAGERL 98 (242)
T ss_dssp HHHHHHHHHHTTSEEEEEESSHHHHHHHHHHCTHTTSEE---THHCHBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCeEEEEECChhhcCchHHhccCCcccc---hhhhhhhhhhhHHHHHHHhhccccchhHHHHHHhhhhh
Confidence 688999999999999999999987765 2334333210 11222221 01122222333322333444556666
Q ss_pred CCccceEEecccccCchh---HhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCc----eecchhHHHHHHHHHc
Q 005798 76 DVTSSQLLVTDSDFRDED---FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG----IFWDNDSLAGLLALEL 148 (676)
Q Consensus 76 g~~~~q~l~~~~d~~~~~---~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~----~~~~~D~~A~~lA~~l 148 (676)
+....+....+.++.... ...+ .+.|..+|++|.|||++|.-.... .|. ..+++|++|+.+|.+|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~l~~~~ipVv~g~~~~~~-------~g~~~~~~~~~sD~~A~~lA~~l 170 (242)
T PF00696_consen 99 GAHAVGLSLSDGGISAAKRDAREVD-KEAIRELLEQGIIPVVSGFAGIDD-------DGEVTTLGNVSSDYIAALLAAAL 170 (242)
T ss_dssp THHEEEHHHTGGTEEEEEEESSEEH-HHHHHHHHHTTSEEEEESEEEEET-------TSTEEEEEEETHHHHHHHHHHHT
T ss_pred hHHHHhhhhhcccchhhhhhhhhhH-HHHHHHHHHCCCEEEEeCCcccCC-------CCCcccCCCCCHHHHHHHHHHHh
Confidence 654333222222211111 1234 788999999999999998211211 333 3499999999999999
Q ss_pred CCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHc-CCcEEEEe
Q 005798 149 KADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA-GIPVVITS 221 (676)
Q Consensus 149 ~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~-gv~v~I~~ 221 (676)
+|++|+|+|||||||+.||+ +|++++|++|+++|+.++... +.+++|||.+|+.+|..+++. +++|+|+|
T Consensus 171 ~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~~---~~~~~~gm~~k~~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 171 GADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELASK---SGDVTGGMKPKHPAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp TCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHHH---TTSSTTTHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHhc---CCCCCCCHHHHHHHHHHHHHcCCCcEEEeC
Confidence 99999999999999999995 799999999999999976532 348899999999999999887 56799986
No 187
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=99.88 E-value=6.6e-22 Score=192.65 Aligned_cols=200 Identities=21% Similarity=0.247 Sum_probs=148.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCChh-HHhHH--hcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAV-GVGRQ--RLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVT 78 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~-~i~~~--~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~ 78 (676)
++++|++++..|++|.||.|||. .-|.. ..|+... ..+ .+.+++++-+.. ++...|.+.|++
T Consensus 33 ~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~~g~~r~------~~D------~mGmlaTvmNal---~L~~aL~~~~~~ 97 (238)
T COG0528 33 IANEIKELVDLGVEVAVVVGGGNIARGYIGAAAGMDRV------TAD------YMGMLATVMNAL---ALQDALERLGVD 97 (238)
T ss_pred HHHHHHHHHhcCcEEEEEECCCHHHHhHHHHHcCCchh------hhh------HHHHHHHHHHHH---HHHHHHHhcCCc
Confidence 78999999999999999999984 22221 1122221 011 134556665544 455889989987
Q ss_pred cceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccc
Q 005798 79 SSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSD 158 (676)
Q Consensus 79 ~~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTd 158 (676)
.. +.+....-.-....+..++ .+.|+.|.|+|+.+ . ++.+|.++|++|+++|+.++||.|+..|+
T Consensus 98 ~~--v~sai~~~~~~e~~~~~~A-~~~l~~grVvIf~g-----G-------tg~P~fTTDt~AALrA~ei~ad~ll~atn 162 (238)
T COG0528 98 TR--VQSAIAMPQVAEPYSRREA-IRHLEKGRVVIFGG-----G-------TGNPGFTTDTAAALRAEEIEADVLLKATN 162 (238)
T ss_pred ce--ecccccCccccCccCHHHH-HHHHHcCCEEEEeC-----C-------CCCCCCchHHHHHHHHHHhCCcEEEEecc
Confidence 53 2222111100112231344 45789999999986 1 45678999999999999999999999995
Q ss_pred -cCccccCCC-CCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCc
Q 005798 159 -VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKR 236 (676)
Q Consensus 159 -VdGVy~~dP-~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~ 236 (676)
|||||++|| ++|||+++++|||+|+.+... . .++..|...|.++++|++|+|.+.++++..++.|+.
T Consensus 163 ~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l---------~--vmD~tA~~l~~~~~i~i~Vfn~~~~~~l~~~~~ge~ 231 (238)
T COG0528 163 KVDGVYDADPKKDPDAKKYDTLTYDEVLKIGL---------K--VMDPTAFSLARDNGIPIIVFNINKPGNLKRALKGEE 231 (238)
T ss_pred CCCceeCCCCCCCCCceecccCCHHHHHHhcC---------e--eecHHHHHHHHHcCCcEEEEeCCCCccHHHHHcCCC
Confidence 999999999 599999999999999875221 1 467889999999999999999999999999999999
Q ss_pred eeeEEe
Q 005798 237 VGTLFH 242 (676)
Q Consensus 237 iGT~i~ 242 (676)
.||.+.
T Consensus 232 ~gT~V~ 237 (238)
T COG0528 232 VGTIVE 237 (238)
T ss_pred CceEec
Confidence 999875
No 188
>PRK04531 acetylglutamate kinase; Provisional
Probab=99.87 E-value=2.7e-21 Score=208.68 Aligned_cols=191 Identities=19% Similarity=0.192 Sum_probs=142.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhH--HhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCcc
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGR--QRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTS 79 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~--~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~ 79 (676)
|+++|+.|+..|.++|||||||+++.. +.+|++++. ...+|+|+.+....+ .+.+...+
T Consensus 55 l~~dla~L~~~G~~~VlVHGggpqI~~~l~~~gie~~~---v~G~RVTd~~tl~vv-------------~~~l~~vn--- 115 (398)
T PRK04531 55 LASSLSFLQEVGLTPIVVHGAGPQLDAELDAAGIEKET---VNGLRVTSPEALAIV-------------RKVFQRSN--- 115 (398)
T ss_pred HHHHHHHHHHCCCcEEEEECCCHHHHHHHHHcCCCcEE---ECCEecCCHHHHHHH-------------HHHHHHHH---
Confidence 789999999999999999999999987 456666542 134788762211111 11110000
Q ss_pred ceEEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchhHHHHHHHHHcCCCeEeeccc
Q 005798 80 SQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSD 158 (676)
Q Consensus 80 ~q~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~l~Ad~li~lTd 158 (676)
..+...|+.+|+.|+|||+++ ++..+ +|..+ +|+|.+|+.+|.+|+|++|+|+||
T Consensus 116 ----------------~~lv~~I~~~L~~g~IPVlsp---lg~~~-----~G~~~NvnaD~vA~~LA~aL~a~KLIfltd 171 (398)
T PRK04531 116 ----------------LDLVEAVESSLRAGSIPVIAS---LGETP-----SGQILNINADVAANELVSALQPYKIIFLTG 171 (398)
T ss_pred ----------------HHHHHHHHHHHHCCCEEEEeC---cEECC-----CCcEEEECHHHHHHHHHHHcCCCEEEEEEC
Confidence 011223888999999999987 23221 45555 999999999999999999999999
Q ss_pred cCccccCCCCCCCCceeceeeh-hchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchH-HHHHhCCc
Q 005798 159 VEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKR 236 (676)
Q Consensus 159 VdGVy~~dP~~~~a~~i~~i~~-~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i-~~~~tg~~ 236 (676)
|+|||+. ++++|++|+. ++...++.. ..++|||++|+++|..|++....+++++...++++ .++++.+.
T Consensus 172 v~GV~d~-----~g~~i~~i~~~~e~~~l~~~----~~vtgGM~~KL~~a~~al~~~~~~~~V~i~~~~~Ll~eLft~~G 242 (398)
T PRK04531 172 TGGLLDA-----DGKLISSINLSTEYDHLMQQ----PWINGGMKLKLEQIKELLDRLPLESSVSITSPSDLAKELFTHKG 242 (398)
T ss_pred CCCccCC-----CCCCcccCCHHHHHHHHHhc----CCCCccHHHHHHHHHHHHhCCCcEEEEEecCCCHHHHHHccCCC
Confidence 9999975 3789999996 455555543 36899999999999999975334888888889998 66788888
Q ss_pred eeeEEecC
Q 005798 237 VGTLFHRD 244 (676)
Q Consensus 237 iGT~i~~~ 244 (676)
.||.+...
T Consensus 243 ~GT~I~~g 250 (398)
T PRK04531 243 SGTLVRRG 250 (398)
T ss_pred CCeEEecC
Confidence 99999876
No 189
>PRK06635 aspartate kinase; Reviewed
Probab=99.87 E-value=1.3e-21 Score=215.11 Aligned_cols=214 Identities=21% Similarity=0.237 Sum_probs=157.1
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCcc--
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTS-- 79 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~-- 79 (676)
++++|+++++.|+++|||||||...+..++....... ...+ .-.++++.++|+..+..++...|+++|++.
T Consensus 22 ~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~-~~~~------~~~~~~~~~~Ge~~~~~~~~~~l~~~g~~a~~ 94 (404)
T PRK06635 22 VAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVS-PLPD------PRELDMLLSTGEQVSVALLAMALQSLGVKARS 94 (404)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhc-cCCC------HHHHHHHhhhhHHHHHHHHHHHHHhCCCCeEE
Confidence 6889999999999999999986445554444332111 0001 112458889999888888999999999874
Q ss_pred ---ceE-EecccccCc-hhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEe
Q 005798 80 ---SQL-LVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLV 154 (676)
Q Consensus 80 ---~q~-l~~~~d~~~-~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li 154 (676)
.|+ +++..+|.+ .....+ .+.++.+++.|.|||++|+-+.... +.-....++++|++|+++|.+|+||+|+
T Consensus 95 l~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~ipVi~g~~~~~~~---g~~~~l~rg~sD~~A~~lA~~l~A~~l~ 170 (404)
T PRK06635 95 FTGWQAGIITDSAHGKARITDID-PSRIREALDEGDVVVVAGFQGVDED---GEITTLGRGGSDTTAVALAAALKADECE 170 (404)
T ss_pred eChhhCCEEecCCCCceEeeecC-HHHHHHHHhCCCEEEecCccEeCCC---CCEEecCCCChHHHHHHHHHHhCCCEEE
Confidence 344 555555543 223334 6889999999999999873222110 0000012369999999999999999999
Q ss_pred eccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHh
Q 005798 155 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 233 (676)
Q Consensus 155 ~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~t 233 (676)
+||||||||++||+ +|++++|++++++|+.++... |.+..|.+++..+.++|++++|.|++++.
T Consensus 171 ~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~--------g~~~~~~~a~~~~~~~~i~~~i~~~~~~~------- 235 (404)
T PRK06635 171 IYTDVDGVYTTDPRIVPKARKLDKISYEEMLELASL--------GAKVLHPRSVEYAKKYNVPLRVRSSFSDN------- 235 (404)
T ss_pred EEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHHc--------CCcccCHHHHHHHHHcCceEEEEcCCCCC-------
Confidence 99999999999995 799999999999999875542 44467888999999999999999987542
Q ss_pred CCceeeEEecC
Q 005798 234 GKRVGTLFHRD 244 (676)
Q Consensus 234 g~~iGT~i~~~ 244 (676)
.||++...
T Consensus 236 ---~gT~i~~~ 243 (404)
T PRK06635 236 ---PGTLITGE 243 (404)
T ss_pred ---CCCEEeeC
Confidence 48888755
No 190
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=99.87 E-value=5.1e-21 Score=192.87 Aligned_cols=197 Identities=20% Similarity=0.258 Sum_probs=139.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccce
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 81 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q 81 (676)
++++|++++.+ ++++||||||... +.++++.... ++. +..+ +.....+.......++..|...+++...
T Consensus 22 i~~~i~~~~~~-~~viiV~ggG~~a-~~~~~~~~~~-----~~~--~~~~--~~~g~~~~~ln~~~l~~ll~~~~~~~~~ 90 (221)
T TIGR02076 22 FANILRKLSDE-HKVGVVVGGGKTA-RRYIGVAREL-----GAS--ETFL--DEIGIDATRLNAMLLIAALGDDAYPKVP 90 (221)
T ss_pred HHHHHHHHHhC-CeEEEEECCcHHH-HHHHHHHHHc-----CCC--HHHH--HHhhhHHHHHHHHHHHHHHHhcCCCCcC
Confidence 67888888877 8999999998743 4443333211 000 0000 1111112222233455666555554210
Q ss_pred EEecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCc
Q 005798 82 LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 161 (676)
Q Consensus 82 ~l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdG 161 (676)
.+ ......+++.|.|||+.| +. + .+++|++|+++|.+|+||.|+|+|||||
T Consensus 91 --------------~~-~~~~~~~l~~g~ipv~~G-~~--~-----------~~s~D~~A~~lA~~l~A~~li~ltdVdG 141 (221)
T TIGR02076 91 --------------EN-FEEALEAMSLGKIVVMGG-TH--P-----------GHTTDAVAALLAEFSKADLLINATNVDG 141 (221)
T ss_pred --------------CC-HHHHHHHHHcCCEEEEcC-CC--C-----------CCCcHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 01 122345788899999987 11 1 2789999999999999999999999999
Q ss_pred cccCCC-CCCCCceeceeehhchHHHHhcCCCCccccc-chHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceee
Q 005798 162 LYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRG-GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 239 (676)
Q Consensus 162 Vy~~dP-~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~g-gM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT 239 (676)
||++|| ++|++++|++++++|+.++... +.+++| +|..|+.++..+.+.|++++|+||+.|+++.+++.|+..||
T Consensus 142 vy~~dP~~~~~a~~i~~i~~~e~~~~~~~---~~~~~g~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~g~~~GT 218 (221)
T TIGR02076 142 VYDKDPKKDPDAKKFDKLTPEELVEIVGS---SSVKAGSNEVVDPLAAKIIERSKIRTIVVNGRDPENLEKVLKGEHVGT 218 (221)
T ss_pred ccCCCCCCCCCCeEeeEECHHHHHHHhcC---CCccCCCCceeHHHHHHHHHHCCCcEEEECCCCccHHHHHHCCCCCCe
Confidence 999999 5899999999999888764432 235567 57789999999999999999999999999998999998999
Q ss_pred EE
Q 005798 240 LF 241 (676)
Q Consensus 240 ~i 241 (676)
.+
T Consensus 219 ~i 220 (221)
T TIGR02076 219 II 220 (221)
T ss_pred Ee
Confidence 87
No 191
>PRK08210 aspartate kinase I; Reviewed
Probab=99.86 E-value=2.9e-21 Score=211.91 Aligned_cols=210 Identities=18% Similarity=0.245 Sum_probs=156.1
Q ss_pred HHHHHHHHHHCCCeEEEEe-----CChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCC
Q 005798 2 ICLQLKELNSQGFEIILVS-----SGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLD 76 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVh-----gGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g 76 (676)
++++|+.++++|+++|||| +|+|.+...++++..... ...+.+ ..+.+.++|+..+..++...|+.+|
T Consensus 22 ~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~-~~~~~~------~~~~l~~~Ge~~s~~~~~~~l~~~G 94 (403)
T PRK08210 22 AVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF-SEISKR------EQDLLMSCGEIISSVVFSNMLNENG 94 (403)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc-cCCChH------HHHHHHhHhHHHHHHHHHHHHHhCC
Confidence 6789999999999999999 445556554444322100 000111 1346789999998888999999999
Q ss_pred CccceE------EecccccCc-hhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCce----ecchhHHHHHHH
Q 005798 77 VTSSQL------LVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI----FWDNDSLAGLLA 145 (676)
Q Consensus 77 ~~~~q~------l~~~~d~~~-~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~----~~~~D~~A~~lA 145 (676)
+++.++ +++.++|.+ .....+ .+.|..+++.|.|||++|.-+. ++ .|.. ++++|++|+.+|
T Consensus 95 i~a~~l~~~~~~~~t~~~~~~~~v~~~~-~~~l~~~l~~~~vpVi~G~~~~--~~-----~g~~~~l~rg~sD~~A~~lA 166 (403)
T PRK08210 95 IKAVALTGGQAGIITDDNFTNAKIIEVN-PDRILEALEEGDVVVVAGFQGV--TE-----NGDITTLGRGGSDTTAAALG 166 (403)
T ss_pred CCeEEechHHccEEccCCCCceeeehhh-HHHHHHHHhcCCEEEeeCeeec--CC-----CCCEEEeCCCchHHHHHHHH
Confidence 986544 566655542 233445 6889999999999999982111 11 2222 258999999999
Q ss_pred HHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCC
Q 005798 146 LELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFA 224 (676)
Q Consensus 146 ~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~ 224 (676)
.+|+|++|+|||||||||++||+ +|++++|++|+++|+.++...|++ +.|.+++..|.++++|++|.|.++
T Consensus 167 ~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~G~~--------v~~~~a~~~~~~~~i~i~i~~~~~ 238 (403)
T PRK08210 167 VALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQGAK--------VIHPRAVEIAMQANIPLRIRSTYS 238 (403)
T ss_pred HHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHCCcc--------ccCHHHHHHHHHCCCeEEEEecCC
Confidence 99999999999999999999995 899999999999999986664432 456789999999999999999875
Q ss_pred cchHHHHHhCCceeeEEecC
Q 005798 225 MDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 225 ~~~i~~~~tg~~iGT~i~~~ 244 (676)
+. .||+|...
T Consensus 239 ~~----------~gT~I~~~ 248 (403)
T PRK08210 239 DS----------PGTLITSL 248 (403)
T ss_pred Cc----------CCcEEEec
Confidence 32 39999765
No 192
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=99.85 E-value=1.1e-20 Score=206.36 Aligned_cols=223 Identities=22% Similarity=0.258 Sum_probs=161.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhccccccc-------------------ccccc---cccC-------------
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV-------------------NSSLA---DLQK------------- 46 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~-------------------~~~~~---~l~~------------- 46 (676)
.++.|++..+.|++||+|.+++-.++..++.+.... ...+. .+..
T Consensus 22 va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (447)
T COG0527 22 VADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASELILDPFIAARLAEVIAEFKKVLLGIA 101 (447)
T ss_pred HHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHHHhhcchhhhhHhhhHhhhhHHhhhhh
Confidence 456677778889999999999754555555444310 00000 0000
Q ss_pred ---ccccchhhHHHhccHHHHHHHHHHHhhhCCCccc-----eE-EecccccCchhHhhhHHHH-HHHHHhCCCeeEEcC
Q 005798 47 ---PQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDFRKQLYDT-VQSLLDLRVIPIFNE 116 (676)
Q Consensus 47 ---~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~-l~~~~d~~~~~~~~~~~~~-i~~ll~~g~iPVi~~ 116 (676)
....-..+.+.+.|+..+..+++..|+..|++.. |. +.+..+|.+........+. +..+++.|.|||++|
T Consensus 102 ~~~~~~~~~~D~ilS~GE~~Sa~lla~~L~~~Gv~A~~~~~~~~~i~t~~~~~~a~i~~~~~~~~l~~~~~~~~v~Vv~G 181 (447)
T COG0527 102 LLGEVSPRERDELLSLGERLSAALLAAALNALGVDARSLDGRQAGIATDSNHGNARILDEDSERRLLRLLEEGKVPVVAG 181 (447)
T ss_pred hccCCCHHHHHHHHhhchHHHHHHHHHHHHhCCCceEEEchHHceeeecCcccccccchhhhhhhHHHHhcCCcEEEecC
Confidence 0012346788999999999999999999998754 44 4444445543322111444 888999999999998
Q ss_pred CCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcc
Q 005798 117 NDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRV 195 (676)
Q Consensus 117 ~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~ 195 (676)
+-+.... +.-..+.++++|++|++||.+|+||+|.|||||||||+.||+ .|++++|++|||+|+.++...|++
T Consensus 182 F~G~~~~---G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaDPRiVp~Ar~i~~isyeEa~ELA~~GAk--- 255 (447)
T COG0527 182 FQGINED---GETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYTADPRIVPDARLLPEISYEEALELAYLGAK--- 255 (447)
T ss_pred ceeecCC---CCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECCCCCccCCCCCCCcceEcCccCHHHHHHHHHCCch---
Confidence 5443321 000112349999999999999999999999999999999996 999999999999999986665543
Q ss_pred cccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 196 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 196 ~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
+...++...|.+++||++|.|.++|+ ..||+|...
T Consensus 256 -----VLHprav~pa~~~~Ip~~i~~t~~p~---------~~GTlI~~~ 290 (447)
T COG0527 256 -----VLHPRAVEPAMRSGIPLRIKNTFNPD---------APGTLITAE 290 (447)
T ss_pred -----hcCHHHHHHHHhcCCcEEEEecCCCC---------CCceEEecC
Confidence 45567999999999999999988875 269999987
No 193
>PRK07431 aspartate kinase; Provisional
Probab=99.85 E-value=9.4e-21 Score=217.31 Aligned_cols=216 Identities=20% Similarity=0.246 Sum_probs=154.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccccccCccccchhhHHHhccHHHHHHHHHHHhhhCCCccc-
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS- 80 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~- 80 (676)
++++|+.+++.|+++||||||+..+.+.++.+..+.+ .....+ ..+++.+.|+.....+++..|.++|++..
T Consensus 22 ~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~~~~~~~t-~~~~~~------~~~~~ls~Ge~~s~~l~~~~l~~~gi~a~~ 94 (587)
T PRK07431 22 VAQRIARTKEAGNDVVVVVSAMGKTTDELVKLAKEIS-SNPPRR------EMDMLLSTGEQVSIALLSMALHELGQPAIS 94 (587)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCchhHHHHHHHHHhc-cCCCHH------HHHHHHHHhHHHHHHHHHHHHHHCCCCeEE
Confidence 6888999999999999999964444443433332211 001111 24688889998888888889999998743
Q ss_pred ----eE-EecccccC-chhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEe
Q 005798 81 ----QL-LVTDSDFR-DEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLV 154 (676)
Q Consensus 81 ----q~-l~~~~d~~-~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li 154 (676)
+. +++...+. +.....+ .+.+..+++.|.|||++|........ .++-....++++|++|+++|.+|+||+|+
T Consensus 95 l~~~~~~~~~~~~~~~~~i~~~~-~~~l~~~l~~g~vpVv~g~~g~~~~~-~g~~~~lgrggsD~~A~~lA~~l~A~~l~ 172 (587)
T PRK07431 95 LTGAQVGIVTESEHGRARILEIK-TDRIQRHLDAGKVVVVAGFQGISLSS-NLEITTLGRGGSDTSAVALAAALGADACE 172 (587)
T ss_pred echhHcCeEecCCCCceeeeecc-HHHHHHHHhCCCeEEecCCcCCCCCC-CCCEeecCCCchHHHHHHHHHHcCCCEEE
Confidence 33 44433332 2222333 57899999999999999743322110 00001123589999999999999999999
Q ss_pred eccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHh
Q 005798 155 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 233 (676)
Q Consensus 155 ~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~t 233 (676)
|||||||||++||+ +|++++|++|+++|+.++.. ++.++|. ++++..+.++|+|++|.|++. +
T Consensus 173 i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~------~G~~v~~--~~a~~~~~~~~i~i~i~~~~~-~------- 236 (587)
T PRK07431 173 IYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELAS------LGASVLH--PRAVEIARNYGVPLVVRSSWS-D------- 236 (587)
T ss_pred EEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHh------CCCceEh--HHHHHHHHHcCCcEEEecCCC-C-------
Confidence 99999999999995 79999999999999987655 3456775 679999999999999999872 1
Q ss_pred CCceeeEEecC
Q 005798 234 GKRVGTLFHRD 244 (676)
Q Consensus 234 g~~iGT~i~~~ 244 (676)
..||+|...
T Consensus 237 --~~GT~i~~~ 245 (587)
T PRK07431 237 --APGTLVTSP 245 (587)
T ss_pred --CCCeEEEeC
Confidence 249999765
No 194
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=99.84 E-value=3.7e-20 Score=186.44 Aligned_cols=125 Identities=23% Similarity=0.306 Sum_probs=105.5
Q ss_pred HHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceecee
Q 005798 100 DTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTY 178 (676)
Q Consensus 100 ~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i 178 (676)
+.+..+|+.|.|||+.|. . + ..++|++|+.+|.+|+||+|+++|||||||++||+ +|++++|++|
T Consensus 94 ~~~~~~l~~g~vpv~~G~-~--~-----------~~s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i 159 (221)
T cd04253 94 EEALEAMFTGKIVVMGGT-E--P-----------GQSTDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRL 159 (221)
T ss_pred HHHHHHHHcCCeEEEECC-C--C-----------CCccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEe
Confidence 445678899999999871 1 1 26799999999999999999999999999999994 8999999999
Q ss_pred ehhchHHHHhcCCCCcccccc-hHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 179 IRAKHQAEITFGDKSRVGRGG-MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 179 ~~~e~~~~~~~g~~~~~~~gg-M~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
+++|+.+.... . ....|+ |..|+.++..+.++|++++|+||+.|+.|.++++|+..||.+
T Consensus 160 ~~~e~~~~~~~-~--~~~~g~~~~~d~~a~~~~~~~gi~~~I~~g~~p~~l~~~l~g~~~GT~I 220 (221)
T cd04253 160 SADELIDIVGK-S--SWKAGSNEPFDPLAAKIIERSGIKTIVVDGRDPENLERALKGEFVGTII 220 (221)
T ss_pred CHHHHHHHccC-C--CcCCCCCcchHHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCCCeEe
Confidence 99888764322 1 122343 678999999999999999999999999999999999899987
No 195
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants. The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP.
Probab=99.81 E-value=5.4e-19 Score=184.85 Aligned_cols=169 Identities=18% Similarity=0.238 Sum_probs=129.4
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccce-----E-EecccccCch----hHhhhHHHHHHHHHhCCCeeEEcCCCceec
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LVTDSDFRDE----DFRKQLYDTVQSLLDLRVIPIFNENDAVST 122 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~q-----~-l~~~~d~~~~----~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~ 122 (676)
.+.+.+.|+..+..++...|++.|++... . +++.++|.+. ....+....+..+++.|.|||++|+-+...
T Consensus 118 ~d~i~s~GE~lSa~lla~~L~~~Gi~a~~l~~~~~~i~t~~~~~~a~~~~~~~~~i~~~l~~ll~~~~vpVv~Gfig~~~ 197 (298)
T cd04244 118 RDYIVSFGERLSAPIFSAALRSLGIKARALDGGEAGIITDDNFGNARPLPATYERVRKRLLPMLEDGKIPVVTGFIGATE 197 (298)
T ss_pred hhHhccHhHHHHHHHHHHHHHhCCCCeEEEcHHHcceeecCcccccccchhHHHHHHHHHHHHhhcCCEEEEeCccccCC
Confidence 45678889998888899999999987542 2 5666555432 122333445667889999999987322111
Q ss_pred CCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchH
Q 005798 123 RKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 201 (676)
Q Consensus 123 ~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~ 201 (676)
. +......++++|++|+.+|.+|+|++|+|||||||||+.||+ +|++++|++|+|+|+.++.. .|.++
T Consensus 198 ~---g~~ttlgRggsD~~A~~~A~~l~a~~l~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~--------~Ga~v 266 (298)
T cd04244 198 D---GAITTLGRGGSDYSATIIGAALDADEIWIWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAY--------FGAKV 266 (298)
T ss_pred C---CCEEEecCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHh--------CCCcc
Confidence 0 000112347999999999999999999999999999999995 89999999999999997655 35567
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 202 AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 202 ~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
.+.+++..|.++|||++|.|+++|+. .||+|
T Consensus 267 lhp~ai~~a~~~~Ipi~i~n~~~p~~---------~GT~I 297 (298)
T cd04244 267 LHPRTVEPAMEKGIPVRVKNTFNPEA---------PGTLI 297 (298)
T ss_pred cCHHHHHHHHHcCCcEEEeeCCCCCC---------CCCEe
Confidence 88889999999999999999998752 58876
No 196
>TIGR00657 asp_kinases aspartate kinase. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis.
Probab=99.80 E-value=4.6e-19 Score=196.63 Aligned_cols=222 Identities=22% Similarity=0.297 Sum_probs=156.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHHhcccccccccccc-----ccc---------------------Ccc-------
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-----DLQ---------------------KPQ------- 48 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~~l~~~~~~~~~~~-----~l~---------------------~~~------- 48 (676)
+++.|......|+++|+|||++..++..++.+......... .+. ..+
T Consensus 21 v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 100 (441)
T TIGR00657 21 VAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIEILERLIPQAIAEELKRLLDAELVLEE 100 (441)
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhc
Confidence 45667767778999999999987777644433221100000 000 000
Q ss_pred ccchhhHHHhccHHHHHHHHHHHhhhCCCccceE------EecccccCchh--HhhhHHHHHHHHHhCCCeeEEcCCCce
Q 005798 49 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDED--FRKQLYDTVQSLLDLRVIPIFNENDAV 120 (676)
Q Consensus 49 ~~l~~~~~~avG~~~~~~~~~~~l~~~g~~~~q~------l~~~~d~~~~~--~~~~~~~~i~~ll~~g~iPVi~~~d~v 120 (676)
.......+.+.|+..+..++...|++.|++...+ +++.++|.+.. ...+ .+.+..+++.|.|||++|+.+.
T Consensus 101 ~~~~~d~ils~GE~~s~~l~~~~l~~~Gi~a~~l~~~~~~l~t~~~~~~~~~~~~~~-~~~l~~~l~~~~vpVv~G~~g~ 179 (441)
T TIGR00657 101 KPREMDRILSFGERLSAALLSAALEELGVKAVSLLGGEAGILTDSNFGRARVIIEIL-TERLEPLLEEGIIPVVAGFQGA 179 (441)
T ss_pred CcchHhheecHHHHHHHHHHHHHHHhCCCCCEEEEcCcceEEecCCCCceeecHhhh-HHHHHHHHhcCCEEEEeCcEee
Confidence 0112466788898887778889999999764322 55655554322 2334 7899999999999999883222
Q ss_pred ecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccc
Q 005798 121 STRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 199 (676)
Q Consensus 121 ~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~gg 199 (676)
... +......++++|++|+.+|.+|+|++|++||||||||++||+ +|++++|++|+++|+.++... |.
T Consensus 180 ~~~---g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~~a~~i~~is~~ea~el~~~--------G~ 248 (441)
T TIGR00657 180 TEK---GETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVPDARRIDEISYEEMLELASF--------GA 248 (441)
T ss_pred CCC---CCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCCeECCccCHHHHHHHHhc--------CC
Confidence 110 000111236899999999999999999999999999999995 899999999999999876543 34
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 200 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 200 M~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
++.+.+++..+.++++|++|.|++.|+ ..||+|...
T Consensus 249 ~v~~~~a~~~~~~~~i~i~i~~~~~~~---------~~GT~I~~~ 284 (441)
T TIGR00657 249 KVLHPRTLEPAMRAKIPIVVKSTFNPE---------APGTLIVAS 284 (441)
T ss_pred cccCHHHHHHHHHcCCeEEEecCCCCC---------CCceEEEeC
Confidence 567888999999999999999998774 259999765
No 197
>PRK08373 aspartate kinase; Validated
Probab=99.79 E-value=1.2e-18 Score=184.04 Aligned_cols=168 Identities=18% Similarity=0.218 Sum_probs=127.2
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eEEecccccCchh-----HhhhHHHHHHHHHhCCCeeEEcCCCceec
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDED-----FRKQLYDTVQSLLDLRVIPIFNENDAVST 122 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~~~~~-----~~~~~~~~i~~ll~~g~iPVi~~~d~v~~ 122 (676)
.+.+.+.|+..+..++...|++.|+++. |++.++++|.+.. ...+ .+.+..+++.|.|||++|.-. .
T Consensus 102 ~D~ils~GE~lSa~lla~~L~~~Gi~a~~l~~~~~i~t~~~~~~a~i~~~~s~~~-~~~l~~~l~~g~VpVv~Gf~g--~ 178 (341)
T PRK08373 102 RDYILSFGERLSAVLFAEALENEGIKGKVVDPWEILEAKGSFGNAFIDIKKSKRN-VKILYELLERGRVPVVPGFIG--N 178 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCceEEEeHHHheeecCCccceeechhhhhhh-HHHHHHHHhCCcEEEEeCCcc--C
Confidence 5788999999999999999999998753 5566776665432 1233 478888999999999998321 1
Q ss_pred CCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchH
Q 005798 123 RKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 201 (676)
Q Consensus 123 ~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~ 201 (676)
. .+......++++|++|+.+|.+|+|++++|+|||||||++||+ .|++++|++|+|+|+.++. .+||.
T Consensus 179 -~-~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~isy~Ea~ela---------~~Gak 247 (341)
T PRK08373 179 -L-NGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPKLVPSARLIPYLSYDEALIAA---------KLGMK 247 (341)
T ss_pred -C-CCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEcccCCHHHHHHHH---------HCcCh
Confidence 1 0000112237999999999999999999999999999999995 8999999999999998632 56676
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 202 AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 202 ~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
.+...|...++.+||++|.|.++++ .||+|...
T Consensus 248 vlhp~ai~~a~~~Ipi~v~~t~~~~----------~GT~I~~~ 280 (341)
T PRK08373 248 ALHWKAIEPVKGKIPIIFGRTRDWR----------MGTLVSNE 280 (341)
T ss_pred hhhHHHHHHHHcCCcEEEecCCCCC----------CCcEEecC
Confidence 6666665554449999999976552 47887644
No 198
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=99.78 E-value=5e-18 Score=176.84 Aligned_cols=169 Identities=21% Similarity=0.155 Sum_probs=128.6
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eEEecccccCch------hH--hhhHHHHHHHHHhC-CCeeEEcCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDE------DF--RKQLYDTVQSLLDL-RVIPIFNEND 118 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~~~~------~~--~~~~~~~i~~ll~~-g~iPVi~~~d 118 (676)
...+.+.|+..+..+++.+|++.|++.. +++++.++|.+. .+ .....+.|...++. +.|||+.|+.
T Consensus 111 ~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~~~~~~~~~~~~~~~a~v~~~~~~~~l~~~l~~~~~v~Vv~GFi 190 (295)
T cd04259 111 RAEVLALGELMSTRLGAAYLEAQGLKVKWLDARELLTATPTLGGETMNYLSARCESEYADALLQKRLADGAQLIITQGFI 190 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcHHHheeecccccccccccccceehhhhhHHHHHHHHhcCCceeEeCCce
Confidence 4678889999988899999999998754 446666665321 11 01113456656665 6799999843
Q ss_pred ceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccc
Q 005798 119 AVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGR 197 (676)
Q Consensus 119 ~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ 197 (676)
+.... +.-..+.+++||++|+.+|.+|+||.|+++|||||||++||+ +|++++|++|+++|+.++.. .
T Consensus 191 g~~~~---G~~ttLGrggsD~tA~~lA~~l~A~~l~i~TdV~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~--------~ 259 (295)
T cd04259 191 ARNAH---GETVLLGRGGSDTSAAYFAAKLQAARCEIWTDVPGLFTANPHEVPHARLLKRLDYDEAQEIAT--------M 259 (295)
T ss_pred eeCCC---CCEEEECCCChHHHHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEeceeCHHHHHHHHH--------c
Confidence 32221 111112349999999999999999999999999999999995 79999999999999997654 4
Q ss_pred cchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 198 GGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 198 ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
|+++.+++++..|.++|||++|.|+++|+. .||+|
T Consensus 260 Ga~v~h~~a~~~a~~~~ipi~i~~~~~p~~---------~GT~I 294 (295)
T cd04259 260 GAKVLHPRCIPPARRANIPMVVRSTERPEL---------SGTLI 294 (295)
T ss_pred CCcccCHHHHHHHHHCCCCEEEEeCCCCCC---------CCcEe
Confidence 567889999999999999999999988752 58876
No 199
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative. This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between.
Probab=99.77 E-value=2.6e-18 Score=180.51 Aligned_cols=168 Identities=19% Similarity=0.219 Sum_probs=126.0
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccceEEecccccCch-----hHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDE-----DFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 127 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~q~l~~~~d~~~~-----~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~ 127 (676)
.+.+.+.|+..+..++...++...++..+++.++++|.+. ....+ .+.+..+++.|.|||++|.-. . + .+
T Consensus 97 ~d~I~s~GE~lSa~Lla~gi~a~~vd~~~~i~t~~~~~~a~~~~~~~~~~-~~~l~~~l~~g~IpVv~Gf~~--~-~-~G 171 (327)
T TIGR02078 97 RDYILSLGERLSAVIFAEGINGKVVDPWDIFFAKGDFGNAFIDIKKSKRN-AKILYEVLESGKIPVIPGFYG--N-L-NG 171 (327)
T ss_pred HHHHHHHHHHHHHHHHHccCCcEEEcHHHHhccCCcCCceeechhhhHhh-HHHHHHHHhCCcEEEEeCCcc--C-C-CC
Confidence 4678888888777666666666556666777777766542 22334 566778999999999987311 1 1 00
Q ss_pred CCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccch-HHHHH
Q 005798 128 EDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGM-TAKVN 205 (676)
Q Consensus 128 ~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM-~~K~~ 205 (676)
......+++||++|+.+|.+|+||.++|||||||||++||+ +|++++|++++++|+.++. ..|| ..+++
T Consensus 172 ~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~lsy~Ea~ela---------~~Gakvlhp~ 242 (327)
T TIGR02078 172 YRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYLSYEEIKIAA---------KLGMKALQWK 242 (327)
T ss_pred eEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEccccCHHHHHHHH---------HCCchhhHHH
Confidence 00111236899999999999999999999999999999995 8999999999999987532 2355 47888
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 206 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 206 aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
++..+.++|||++|.|.++|+ .||+|...
T Consensus 243 a~~~a~~~~Ipi~I~~t~~~~----------~GT~I~~~ 271 (327)
T TIGR02078 243 AADLAKEYKIPVLFGRTRDWR----------MGTLISNR 271 (327)
T ss_pred HHHHHHHCCCeEEEEeCCCcC----------CCcEEecC
Confidence 999999999999999987652 48888755
No 200
>PRK06291 aspartate kinase; Provisional
Probab=99.77 E-value=7.3e-18 Score=187.71 Aligned_cols=172 Identities=20% Similarity=0.240 Sum_probs=133.1
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eE-EecccccCch----hHhhhHHHHHHHHHhCCCeeEEcCCCceec
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDE----DFRKQLYDTVQSLLDLRVIPIFNENDAVST 122 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~-l~~~~d~~~~----~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~ 122 (676)
.+.+.+.|+..+..++...|+..|++.. +. +++.++|... ..+.+..+.+..+++.|.|||++|+-+...
T Consensus 122 ~d~i~s~GE~~Sa~l~~~~L~~~Gi~a~~l~~~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gfig~~~ 201 (465)
T PRK06291 122 RDYILSFGERLSAPILSGALRDLGIKSVALTGGEAGIITDSNFGNARPLPKTYERVKERLEPLLKEGVIPVVTGFIGETE 201 (465)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCCCCeEEEchHHCcEEecCCCCceeechhhHHHHHHHHHHHhhcCcEEEEeCcEEcCC
Confidence 3678899999988889999999998753 32 5665555432 223344567888999999999987322111
Q ss_pred CCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchH
Q 005798 123 RKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 201 (676)
Q Consensus 123 ~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~ 201 (676)
. +......++++|++|+.+|.+|+||.|+|||||||||++||+ +|++++|++|+++|+.++.. .|.|+
T Consensus 202 ~---g~~~tlgrggsD~~A~~~A~~l~a~~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~~--------~G~~v 270 (465)
T PRK06291 202 E---GIITTLGRGGSDYSAAIIGAALDADEIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELSY--------FGAKV 270 (465)
T ss_pred C---CCEEEecCCChHHHHHHHHHhcCCCEEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHHh--------CCCcc
Confidence 0 000112247999999999999999999999999999999995 89999999999999987543 35578
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 202 AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 202 ~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
.+++++..|.++|||++|.|++.|+ ..||+|...
T Consensus 271 ~~~~a~~~~~~~~i~i~i~~~~~~~---------~~gt~i~~~ 304 (465)
T PRK06291 271 LHPRTIEPAMEKGIPVRVKNTFNPE---------FPGTLITSD 304 (465)
T ss_pred cCHHHHHHHHHcCCcEEEecCCCCC---------CCceEEEec
Confidence 8999999999999999999998874 359998754
No 201
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH). These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act
Probab=99.76 E-value=8.1e-18 Score=175.36 Aligned_cols=169 Identities=20% Similarity=0.258 Sum_probs=126.6
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eEEecccccCchhHhh-hHHHHHHHHHhC-CCeeEEcCCCceecCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDFRK-QLYDTVQSLLDL-RVIPIFNENDAVSTRKA 125 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~~~~~~~~-~~~~~i~~ll~~-g~iPVi~~~d~v~~~~~ 125 (676)
...+.+.|+..+..++..+|++.|++.. +.+++++++.+..... ...+.+..++.. +.|||+.|+-+....
T Consensus 117 ~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~~-- 194 (294)
T cd04257 117 RAKVLSFGERLSARLLSALLNQQGLDAAWIDARELIVTDGGYLNAVVDIELSKERIKAWFSSNGKVIVVTGFIASNPQ-- 194 (294)
T ss_pred hhhheeHHHHHHHHHHHHHHHhCCCCeEEEchHHeeEecCCCCceEechHhhHHHHHHHHhcCCCEEEecCcccCCCC--
Confidence 4677888999988899999999998753 4577766665432211 114566666676 899999984221110
Q ss_pred CCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHH
Q 005798 126 PYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 204 (676)
Q Consensus 126 ~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~ 204 (676)
+......++++|++|+.+|..|+||.|+|||||||||++||+ +|++++|++|+++|+.++...| +.-| ..
T Consensus 195 -G~~ttlGRGGSD~~A~~lA~~l~a~~l~i~tdVdGvyt~DP~~~~~A~~i~~is~~ea~~l~~~G------akv~--h~ 265 (294)
T cd04257 195 -GETTTLGRNGSDYSAAILAALLDADQVEIWTDVDGVYSADPRKVKDARLLPSLSYQEAMELSYFG------AKVL--HP 265 (294)
T ss_pred -CCEEECCCCchHHHHHHHHHHhCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHhCC------Cccc--CH
Confidence 111122348899999999999999999999999999999995 8999999999999998765433 3333 34
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 205 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 205 ~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
++...+.++|||++|.|+++|+. .||+|
T Consensus 266 ~~~~~a~~~~Ipi~i~~~~~p~~---------~GT~I 293 (294)
T cd04257 266 KTIQPVAKKNIPILIKNTFNPEA---------PGTLI 293 (294)
T ss_pred HHHHHHHHCCCCEEEeeCCCCCC---------CCCEe
Confidence 57789999999999999988753 57776
No 202
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=99.76 E-value=1.1e-17 Score=173.25 Aligned_cols=168 Identities=21% Similarity=0.194 Sum_probs=128.4
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eE-EecccccCchhH-hhhHHHHHHHHHhCCCeeEEcCCCceecCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 125 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~-l~~~~d~~~~~~-~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~ 125 (676)
...+.+.|+..+..+++..|+..|++.. ++ ++++++|.+... ..+ .+.+..+++.+.|||+.|+-+....
T Consensus 112 ~d~i~s~GE~lSa~ll~~~L~~~Gi~a~~ld~~~~~i~t~~~~~~a~~~~~~-~~~~~~~~~~~~v~Vv~Gf~g~~~~-- 188 (288)
T cd04245 112 LDALKARGEYLNAQLMAAYLNYQGIDARYVIPKDAGLVVTDEPGNAQILPES-YQKIKKLRDSDEKLVIPGFYGYSKN-- 188 (288)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHCCCCeEEEcHHHCceeecCCccccccchhh-HHHHHHHHhCCCEEEEeCccccCCC--
Confidence 4688999999988899999999998754 33 566666654221 122 5667777888999999983222210
Q ss_pred CCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHH
Q 005798 126 PYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 204 (676)
Q Consensus 126 ~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~ 204 (676)
+.-.-+.++++|++|+.+|.+|+|+.+.+||||||||++||+ +|+++.|++|||+|+.++..+| ..-|.|+
T Consensus 189 -G~~ttLgRggSD~tAal~A~~l~A~~v~i~tdVdGvytaDPr~v~~A~~i~~lsy~EA~ela~~G------akVlhp~- 260 (288)
T cd04245 189 -GDIKTFSRGGSDITGAILARGFQADLYENFTDVDGIYAANPRIVANPKPISEMTYREMRELSYAG------FSVFHDE- 260 (288)
T ss_pred -CCEEEcCCCchHHHHHHHHHHcCCCEEEEEeCCCceECCCCCCCCCCeEeCccCHHHHHHHHHCC------CcccCHH-
Confidence 000112237999999999999999999999999999999995 8999999999999999765543 4445554
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 205 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 205 ~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
+...|.+++||++|.|.++|+. .||+|
T Consensus 261 -ai~~a~~~~Ipi~v~n~~~p~~---------~GT~I 287 (288)
T cd04245 261 -ALIPAIEAGIPINIKNTNHPEA---------PGTLI 287 (288)
T ss_pred -HHHHHHHCCCcEEEeeCCCCCC---------CCcee
Confidence 8899999999999999988752 58876
No 203
>PRK09084 aspartate kinase III; Validated
Probab=99.75 E-value=1.4e-17 Score=184.04 Aligned_cols=171 Identities=20% Similarity=0.206 Sum_probs=131.8
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCc-----cceEEecccccCchhH-----hhhHHHHHHHHHhCCCeeEEcCCCceec
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVT-----SSQLLVTDSDFRDEDF-----RKQLYDTVQSLLDLRVIPIFNENDAVST 122 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~-----~~q~l~~~~d~~~~~~-----~~~~~~~i~~ll~~g~iPVi~~~d~v~~ 122 (676)
.+.+.+.|+..+..++..+|+..|++ ++|+++|+++|.+... .....+.+..+++.+ |||+.|+-+...
T Consensus 109 ~d~i~s~GE~lSa~l~~~~L~~~Gi~a~~l~~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~ 187 (448)
T PRK09084 109 TDELVSHGELMSTLLFVELLRERGVQAEWFDVRKVMRTDDRFGRAEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDE 187 (448)
T ss_pred hhhhhhHHHHHHHHHHHHHHHhCCCCcEEEchHHeEEecCCCCcccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCC
Confidence 57889999999999999999999987 4567888877765422 122235677778888 999988433221
Q ss_pred CCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchH
Q 005798 123 RKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 201 (676)
Q Consensus 123 ~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~ 201 (676)
. +....+.++++|++|+.+|..|+||.+++||||||||++||+ +|++++|++|+|+|+.++...|+ . +
T Consensus 188 ~---G~~ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~Gi~t~dP~~~~~a~~i~~is~~ea~ela~~Ga------~--v 256 (448)
T PRK09084 188 K---GRTTTLGRGGSDYSAALLAEALNASRVEIWTDVPGIYTTDPRIVPAAKRIDEISFEEAAEMATFGA------K--V 256 (448)
T ss_pred C---CCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEcccCCHHHHHHHHhCCC------c--c
Confidence 1 111113348999999999999999999999999999999995 89999999999999997655442 2 2
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 202 AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 202 ~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
...++...+.++++|++|.|+++|+ ..||+|...
T Consensus 257 lh~~~~~~~~~~~i~i~i~~~~~~~---------~~GT~I~~~ 290 (448)
T PRK09084 257 LHPATLLPAVRSNIPVFVGSSKDPE---------AGGTWICND 290 (448)
T ss_pred cCHHHHHHHHHcCCcEEEEeCCCCC---------CCceEEecC
Confidence 3445888899999999999998875 358888754
No 204
>PRK05925 aspartate kinase; Provisional
Probab=99.74 E-value=1.5e-17 Score=182.28 Aligned_cols=171 Identities=22% Similarity=0.190 Sum_probs=128.5
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCc-----cceEEecccccCchhH---hhhHHHHHHHHHhCCCeeEEcCCCceecCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVT-----SSQLLVTDSDFRDEDF---RKQLYDTVQSLLDLRVIPIFNENDAVSTRK 124 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~-----~~q~l~~~~d~~~~~~---~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~ 124 (676)
...+.+.|+..+..+++.+|+..|++ ..++++|+++|.+... ... .......++.+.|||++|+-+....
T Consensus 102 ~d~i~s~GE~~Sa~l~a~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~~~~~-~~~~~~~~~~~~v~Vv~GF~g~~~~- 179 (440)
T PRK05925 102 QARILAIGEDISASLICAYCCTYVLPLEFLEARQVILTDDQYLRAVPDLALMQ-TAWHELALQEDAIYIMQGFIGANSS- 179 (440)
T ss_pred hhhheehhHHHHHHHHHHHHHhCCCCeEEEcHHHhEeecCCccccccCHHHHH-HHHHHhhccCCcEEEecCcceeCCC-
Confidence 46788999999888999999999985 3456788776664222 111 2233334567789999984332221
Q ss_pred CCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHH
Q 005798 125 APYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 203 (676)
Q Consensus 125 ~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K 203 (676)
+.-..+.+++||++|+++|.+|+||.|++||||||||++||+ +|++++|++++|+|+.++...|+ ....++|
T Consensus 180 --G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~~~A~~i~~is~~ea~ela~~Ga--~vl~~~~--- 252 (440)
T PRK05925 180 --GKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKIIKDAQLIPELSFEEMQNLASFGA--KVLHPPM--- 252 (440)
T ss_pred --CCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCCCCCeEeeEECHHHHHHHHhCCC--CcCCHHH---
Confidence 111223469999999999999999999999999999999995 89999999999999987554443 2445554
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 204 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 204 ~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
...|.++|||++|.|+++|+ ..||++...
T Consensus 253 ---~~~a~~~~Ipi~I~~~~~p~---------~~GT~i~~~ 281 (440)
T PRK05925 253 ---LKPCVRAGIPIFVTSTFDVT---------KGGTWIYAS 281 (440)
T ss_pred ---HHHHHHCCCcEEEecCCCCC---------CCccEEecC
Confidence 47899999999999999886 258988754
No 205
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-
Probab=99.72 E-value=5.8e-17 Score=168.90 Aligned_cols=169 Identities=21% Similarity=0.259 Sum_probs=127.2
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eEEecccccCchhHh-hhHHHHHHHHHhC-CCeeEEcCCCceecCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDFR-KQLYDTVQSLLDL-RVIPIFNENDAVSTRKA 125 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~~~~~~~-~~~~~~i~~ll~~-g~iPVi~~~d~v~~~~~ 125 (676)
...+.+.|+..+..++..+|+..|++.. +++.+.+++...... ....+.+..+++. +.|||+.|+-+...
T Consensus 116 ~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~~~~~~~~~~~~~s~~~~~~~~~~~~~v~Vv~Gfig~~~--- 192 (293)
T cd04243 116 RAEVLSFGELLSSRLMSAYLQEQGLPAAWLDARELLLTDDGFLNAVVDLKLSKERLAQLLAEHGKVVVTQGFIASNE--- 192 (293)
T ss_pred hhHheeHHHHHHHHHHHHHHHhCCCCcEEEcHHHeEEecCCCCcchhhhHHHHHHHHHHHhcCCCEEEecCccccCC---
Confidence 4677888999988999999999998754 346666555543221 1114567777776 89999998422211
Q ss_pred CCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHH
Q 005798 126 PYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 204 (676)
Q Consensus 126 ~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~ 204 (676)
++......+++||++|+.+|.+|+||.|++||||||||++||+ +|++++|++|+++|+.++...| ..-| ..
T Consensus 193 ~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~tdvdGiyt~dP~~~~~a~~i~~ls~~ea~~l~~~G------akvl--~p 264 (293)
T cd04243 193 DGETTTLGRGGSDYSAALLAALLDAEEVEIWTDVDGVYTADPRKVPDARLLKELSYDEAMELAYFG------AKVL--HP 264 (293)
T ss_pred CCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHhCC------Cccc--CH
Confidence 1111112248899999999999999999999999999999995 8999999999999999766544 3333 44
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 205 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 205 ~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
++...|.++|||++|.|+++|+. .||+|
T Consensus 265 ~ai~~a~~~~i~i~i~~~~~p~~---------~GT~I 292 (293)
T cd04243 265 RTIQPAIRKNIPIFIKNTFNPEA---------PGTLI 292 (293)
T ss_pred HHHHHHHHCCCcEEEecCCCCCC---------CCCEe
Confidence 58889999999999999998753 58876
No 206
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=99.71 E-value=1.1e-16 Score=166.32 Aligned_cols=168 Identities=21% Similarity=0.217 Sum_probs=126.5
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eEEecccccCchh-----HhhhHHHHHHHHHhCCCeeEEcCCCceec
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDED-----FRKQLYDTVQSLLDLRVIPIFNENDAVST 122 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~~~~~-----~~~~~~~~i~~ll~~g~iPVi~~~d~v~~ 122 (676)
.+.+.+.|+..+..+++.+|+..|++.. ++++|+++|.+.. ...+....+..+ ..+.|||++|+-+...
T Consensus 113 ~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~v~Vv~Gf~g~~~ 191 (292)
T cd04258 113 RDELLSFGERMSSLLFSEALREQGVPAEWFDVRTVLRTDSRFGRAAPDLNALAELAAKLLKPL-LAGTVVVTQGFIGSTE 191 (292)
T ss_pred HhHhhhHHHHHHHHHHHHHHHhCCCCeEEEchHHeEEecCCCccccccHHHHHHHHHHHHHHh-hcCCEEEECCccccCC
Confidence 4678889999988899999999998754 4577777765432 222223444444 4568999998422211
Q ss_pred CCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchH
Q 005798 123 RKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 201 (676)
Q Consensus 123 ~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~ 201 (676)
.+.-+.+.+++||++|+.+|.+|+|+.+++||||||||++||+ +|++++|++|+|+|+.++...|+ .-|
T Consensus 192 ---~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~~Ga------kvl- 261 (292)
T cd04258 192 ---KGRTTTLGRGGSDYSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAEMATFGA------KVL- 261 (292)
T ss_pred ---CCCEEecCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEeceeCHHHHHHHHHCCC------ccc-
Confidence 1111223469999999999999999999999999999999995 89999999999999997665442 333
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEE
Q 005798 202 AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 241 (676)
Q Consensus 202 ~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i 241 (676)
..++...+.+++||++|.|.++|+ ..||+|
T Consensus 262 -hp~a~~~~~~~~ipi~i~~~~~p~---------~~GT~I 291 (292)
T cd04258 262 -HPATLLPAIRKNIPVFVGSSKDPE---------AGGTLI 291 (292)
T ss_pred -CHHHHHHHHHcCCcEEEEeCCCCC---------CCCcee
Confidence 446888999999999999988875 258876
No 207
>PLN02551 aspartokinase
Probab=99.68 E-value=2.7e-16 Score=175.51 Aligned_cols=172 Identities=15% Similarity=0.195 Sum_probs=130.5
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eE-EecccccCchhH----hhhHHHHHHHHH-hCCCeeEEcCCCcee
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDF----RKQLYDTVQSLL-DLRVIPIFNENDAVS 121 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~-l~~~~d~~~~~~----~~~~~~~i~~ll-~~g~iPVi~~~d~v~ 121 (676)
.+.+.+.|+..+..+++.+|+..|++.. ++ ++|+++|.+... +.++.+.+...+ +.+.|||++|+-+..
T Consensus 165 ~d~ils~GE~lSa~lla~~L~~~Gi~a~~lda~~~gi~t~~~~~~a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~ 244 (521)
T PLN02551 165 RDYLVSFGERMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKG 244 (521)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHCCCCcEEechHHcceEecCCCCccchhhhhHHHHHHHHHhhhccCCeEEEEcCccccC
Confidence 5788999999999999999999998754 44 777777765332 112223333333 356899999854433
Q ss_pred -cCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccc
Q 005798 122 -TRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 199 (676)
Q Consensus 122 -~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~gg 199 (676)
.. +.-..+.++++|++|+.+|.+|+|+.+.|||||||||+.||+ .|++++|++|||+|+.++..+| ..-
T Consensus 245 ~~~---G~~ttLGRGGSD~sA~~la~~L~A~~v~I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~G------akV 315 (521)
T PLN02551 245 WKT---GAITTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFG------AQV 315 (521)
T ss_pred CCC---CcEEecCCChHHHHHHHHHHHcCCCEEEEEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCC------Ccc
Confidence 21 111223459999999999999999999999999999999995 8999999999999999866544 444
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 200 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 200 M~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
++| ++...|.+++||++|.|.++|+ ..||+|...
T Consensus 316 lhp--~ai~pa~~~~Ipi~vknt~~p~---------~~GT~I~~~ 349 (521)
T PLN02551 316 LHP--QSMRPAREGDIPVRVKNSYNPT---------APGTLITKT 349 (521)
T ss_pred cCH--HHHHHHHHCCceEEEEecCCCC---------CCCcEEecc
Confidence 444 5899999999999999988764 369999755
No 208
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=99.68 E-value=4.8e-16 Score=162.16 Aligned_cols=171 Identities=16% Similarity=0.151 Sum_probs=121.5
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eEEeccccc--CchhHhhhHHH-HHHHHHh-CCCeeEEcCCCceecC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDF--RDEDFRKQLYD-TVQSLLD-LRVIPIFNENDAVSTR 123 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~--~~~~~~~~~~~-~i~~ll~-~g~iPVi~~~d~v~~~ 123 (676)
.+.+.+.|+..+..+++.+|++.|++.. +++.++.++ ..........+ ....+.+ .+.|||+.|+-+....
T Consensus 125 ~d~i~s~GE~lSa~l~a~~L~~~Gi~a~~ld~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~GFig~~~~ 204 (306)
T cd04247 125 KDLVISTGEKLSCRFMAAVLRDRGVDAEYVDLSHIVDLDFSIEALDQTFYDELAQVLGEKITACENRVPVVTGFFGNVPG 204 (306)
T ss_pred HHHHhhHHHHHHHHHHHHHHHhCCCCeEEEcHHHheecCCCccccccchhHHHHHHHHHHhhccCCceEEeeccEecCCC
Confidence 3677899999988999999999998754 334333211 01110111112 2222332 5789999984222110
Q ss_pred CCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHH
Q 005798 124 KAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 202 (676)
Q Consensus 124 ~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~ 202 (676)
+....+.++++|++|+++|..|+|+.++|||||||||++||+ +|++++|++|+|+|+.++...| .. +.
T Consensus 205 ---G~~ttLGRgGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~G------ak--Vl 273 (306)
T cd04247 205 ---GLLSQIGRGYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYYG------SE--VI 273 (306)
T ss_pred ---CCeEEeCCCchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhCc------Cc--cc
Confidence 111223359999999999999999999999999999999995 8999999999999999765544 23 34
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEec
Q 005798 203 KVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 243 (676)
Q Consensus 203 K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~ 243 (676)
..++...|.+++||++|.|.++|+ ..||+|.+
T Consensus 274 Hp~ti~pa~~~~Ipi~i~nt~~P~---------~~GT~I~~ 305 (306)
T cd04247 274 HPFTMEQVIKARIPIRIKNVENPR---------GEGTVIYP 305 (306)
T ss_pred CHHHHHHHHHcCCcEEEecCCCCC---------CCCcEEcC
Confidence 456999999999999999988875 35898864
No 209
>PRK09034 aspartate kinase; Reviewed
Probab=99.68 E-value=4.2e-16 Score=172.83 Aligned_cols=172 Identities=20% Similarity=0.185 Sum_probs=130.4
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eE-EecccccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAP 126 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~-l~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~ 126 (676)
.+.+.+.|+..+..+++..|+..|++.. ++ ++|+++|.+........+.+..++..+.|||++|+-+....
T Consensus 112 ~d~l~s~GE~~S~~l~a~~L~~~g~~a~~~~~~~~~~~t~~~~~~a~i~~~~~~~~~~~~~~~~v~Vv~GFig~~~~--- 188 (454)
T PRK09034 112 LDAFKARGEDLNAKLIAAYLNYEGIPARYVDPKEAGIIVTDEPGNAQVLPESYDNLKKLRDRDEKLVIPGFFGVTKD--- 188 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcEEEchHHceEEecCCcCceeEcHhhHHHHHHHHhcCCEEEecCccccCCC---
Confidence 4688999999988899999999998754 34 66766665432211124556666677889999984332211
Q ss_pred CCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHHH
Q 005798 127 YEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 205 (676)
Q Consensus 127 ~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~ 205 (676)
+.-.-+..+++|++|+.+|.+|+||.+.+||||||||++||+ .|++++|++|||+|+.++...| ..-|.| +
T Consensus 189 g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi~taDPr~v~~A~~l~~lsy~Ea~ela~~G------akvlhp--~ 260 (454)
T PRK09034 189 GQIVTFSRGGSDITGAILARGVKADLYENFTDVDGIYAANPRIVKNPKSIKEITYREMRELSYAG------FSVFHD--E 260 (454)
T ss_pred CCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCccCcCCCCCCCCCeECCccCHHHHHHHHhCC------cccCCH--H
Confidence 111112349999999999999999999999999999999995 8999999999999999765543 444555 4
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 206 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 206 aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
+...|.+++||++|.|.++|+ ..||+|...
T Consensus 261 ai~~a~~~~Ipi~v~~~~~p~---------~~GT~I~~~ 290 (454)
T PRK09034 261 ALIPAYRGGIPINIKNTNNPE---------DPGTLIVPD 290 (454)
T ss_pred HHHHHHHcCCCEEEEcCCCCC---------CCccEEEec
Confidence 889999999999999988774 358998755
No 210
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional
Probab=99.61 E-value=4.4e-15 Score=176.98 Aligned_cols=171 Identities=17% Similarity=0.093 Sum_probs=127.3
Q ss_pred hHHHhccHHHHHHHHHHHhhhCCCccc-----eEEecccccC--chhHhh-------hHHHHHHHHHhCC-CeeEEcCCC
Q 005798 54 KACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFR--DEDFRK-------QLYDTVQSLLDLR-VIPIFNEND 118 (676)
Q Consensus 54 ~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~~--~~~~~~-------~~~~~i~~ll~~g-~iPVi~~~d 118 (676)
+.+.+.|+..+..+++.+|++.|++.. +++.+.+++. ...++. ...+.++.+++.+ .|||+.|.-
T Consensus 120 d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~Gf~ 199 (861)
T PRK08961 120 AEVLGQGELLSTTLGAAYLEASGLDMGWLDAREWLTALPQPNQSEWSQYLSVSCQWQSDPALRERFAAQPAQVLITQGFI 199 (861)
T ss_pred heEEEehHHHHHHHHHHHHHhCCCCcEEEcHHHhEeecCccccccccccccceecHhhHHHHHHHHhccCCeEEEeCCcc
Confidence 566788998888889999999998763 4455544211 111111 1134666666665 499999843
Q ss_pred ceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccc
Q 005798 119 AVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGR 197 (676)
Q Consensus 119 ~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ 197 (676)
+.... +.-..+.+++||++|+.+|.+|+||+|+++|||||||++||+ +|++++|++|+++|+.++.. .
T Consensus 200 g~~~~---g~~ttLgrggsD~~A~~iA~~l~a~~~~i~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~el~~--------~ 268 (861)
T PRK08961 200 ARNAD---GGTALLGRGGSDTSAAYFAAKLGASRVEIWTDVPGMFSANPKEVPDARLLTRLDYDEAQEIAT--------T 268 (861)
T ss_pred eeCCC---CCEEEEeCCchHHHHHHHHHHcCCCEEEEEeCCCccccCCCCCCCCceEecccCHHHHHHHHH--------C
Confidence 33221 111112359999999999999999999999999999999995 89999999999999987544 4
Q ss_pred cchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 198 GGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 198 ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
|+|+.+++++..|.++|||++|.|+++|+ ..||+|...
T Consensus 269 g~~v~~~~a~~~a~~~~i~i~v~~~~~~~---------~~gT~I~~~ 306 (861)
T PRK08961 269 GAKVLHPRSIKPCRDAGIPMAILDTERPD---------LSGTSIDGD 306 (861)
T ss_pred CCeEECHHHHHHHHHCCCCEEEEeCCCCC---------CCccEEeCC
Confidence 67889999999999999999999998774 247777543
No 211
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.60 E-value=6.7e-15 Score=145.85 Aligned_cols=120 Identities=23% Similarity=0.289 Sum_probs=90.5
Q ss_pred HHHHHHHhCCCeeEEcCCCce-ecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceecee
Q 005798 100 DTVQSLLDLRVIPIFNENDAV-STRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTY 178 (676)
Q Consensus 100 ~~i~~ll~~g~iPVi~~~d~v-~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i 178 (676)
..+..++..|.|||+.|-... ...+. ....++|+|++|+++|.+|+|++|+++|||||||++| +++|+++
T Consensus 82 ~~~~~~~~~g~ipV~~P~~~~~~~~~~----~~~~~~ttD~lAa~lA~~l~A~~Li~ltdVdGVy~~d-----a~~i~~i 152 (203)
T cd04240 82 AELTDVLERGKIAILLPYRLLLDTDPL----PHSWEVTSDSIAAWLAKKLGAKRLVIVTDVDGIYEKD-----GKLVNEI 152 (203)
T ss_pred HHHHHHHHCCCcEEEeCchhhcccCCC----CcccccCHHHHHHHHHHHcCCCEEEEEeCCccccCCC-----CcCcccc
Confidence 456778899999999872110 01111 1223499999999999999999999999999999873 8999999
Q ss_pred ehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCC-ceeeEE
Q 005798 179 IRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK-RVGTLF 241 (676)
Q Consensus 179 ~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~-~iGT~i 241 (676)
+.+|+.. . .... +|.+| .+.++|++++|+||+.|+++.+.+.|+ ..||.+
T Consensus 153 ~~~e~~~---~----~~id-~~~~~-----~~~~~gi~v~I~~g~~~~~l~~~l~g~~~~GT~I 203 (203)
T cd04240 153 AAAELLG---E----TSVD-PAFPR-----LLTKYGIRCYVVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred CHHHhCC---C----Ceeh-hhHHH-----HHHhCCCeEEEECCCCccHHHHHHCCCCCCCCCC
Confidence 9876542 1 1222 24444 467889999999999999999888887 788864
No 212
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=99.60 E-value=4.4e-15 Score=173.80 Aligned_cols=171 Identities=15% Similarity=0.092 Sum_probs=127.3
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eEEecccccCchhHhhhHHHHHHHHHhCC--CeeEEcCCCceecCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDFRKQLYDTVQSLLDLR--VIPIFNENDAVSTRKA 125 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~~~~~~~~~~~~~i~~ll~~g--~iPVi~~~d~v~~~~~ 125 (676)
.+.+.+.|+..+..+++.+|++.|++.. |++.++..+..........+.+..++..+ .|||++|+-+....
T Consensus 122 ~d~ils~GE~~Sa~lla~~L~~~G~~a~~ld~~~~i~~~~~~~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~~-- 199 (810)
T PRK09466 122 YAEVVGHGEVWSARLMAALLNQQGLPAAWLDARSFLRAERAAQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNEA-- 199 (810)
T ss_pred hhheecHHHHHHHHHHHHHHHhCCCCcEEEcHHHheecCCCCCcccchhhhHHHHHHHHhccCCeEEEeeCccccCCC--
Confidence 4678899999999999999999998754 44444433321111111245677777654 79999984332221
Q ss_pred CCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHH
Q 005798 126 PYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 204 (676)
Q Consensus 126 ~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~ 204 (676)
+....+.++++|++|+.+|.+|+|+.+.|||||||||++||+ .|++++|++|||+|+.++...| ..-++|
T Consensus 200 -G~~ttLGRGGSD~tA~~la~~l~A~~v~i~tDV~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~G------akVlHp-- 270 (810)
T PRK09466 200 -GETVLLGRNGSDYSATLIGALAGVERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLA------APVLHA-- 270 (810)
T ss_pred -CCEEEcCCChHHHHHHHHHHHcCCCEEEEEeCCCccccCCcccCCCceEcccCCHHHHHHHHHcC------ccccCH--
Confidence 111122348999999999999999999999999999999996 8999999999999999866654 344444
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEec
Q 005798 205 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 243 (676)
Q Consensus 205 ~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~ 243 (676)
++...|.+++||++|.|.++|+ ..||+|..
T Consensus 271 ~ti~pa~~~~Ipi~V~ntf~p~---------~~GT~I~~ 300 (810)
T PRK09466 271 RTLQPVSGSDIDLQLRCSYQPE---------QGSTRIER 300 (810)
T ss_pred HHHHHHHHcCCeEEEecCCCCC---------CCceEEec
Confidence 5889999999999999988764 35888865
No 213
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=99.59 E-value=1e-14 Score=150.15 Aligned_cols=165 Identities=15% Similarity=0.122 Sum_probs=118.2
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccceEEecc----cccCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTD----SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 128 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~q~l~~~----~d~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~ 128 (676)
+..+.+.|+..+..++...|++.|++...+-.+. .++.... .+.+.+..+...+.|||+.|.. .. . .+.
T Consensus 133 rd~l~S~GE~~Sa~l~a~~L~~~Gi~A~~vD~~~~~~~~~~t~~~---~i~~~~~~~~~~~~v~IvtGF~--~~-~-~G~ 205 (304)
T cd04248 133 RELLASLGEAHSAFNTALLLQNRGVNARFVDLSGWRDSGDMTLDE---RISEAFRDIDPRDELPIVTGYA--KC-A-EGL 205 (304)
T ss_pred HHHHhhhCHHHHHHHHHHHHHHCCCCeEEECcccccccCCCCcHH---HHHHHHHhhccCCcEEEeCCcc--CC-C-CCC
Confidence 5677899999888889999999999765321211 1121111 1123333333367899999841 11 1 111
Q ss_pred CCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-C--CCCceeceeehhchHHHHhcCCCCcccccchHHHHH
Q 005798 129 DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 205 (676)
Q Consensus 129 ~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~--~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~ 205 (676)
-..+.++.||++|+.+|.+|+|+.++|||||+ ||+.||+ . |+++.|++|||+|+.++...| ..-++| +
T Consensus 206 itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~~lsY~EA~ELA~~G------akvLHP--~ 276 (304)
T cd04248 206 MREFDRGYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIGRTNYDVADQLANLG------MEAIHP--K 276 (304)
T ss_pred EEEcCCCcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeCccCHHHHHHHHHcC------hhhcCH--H
Confidence 12223499999999999999999999999996 9999996 6 689999999999999866544 344445 5
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEe
Q 005798 206 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 242 (676)
Q Consensus 206 aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~ 242 (676)
++..+.++|||++|.|.++|+ ..||+|.
T Consensus 277 ai~pa~~~~IPi~Vkntf~P~---------~~GTlIt 304 (304)
T cd04248 277 AAKGLRQAGIPLRVKNTFEPD---------HPGTLIT 304 (304)
T ss_pred HHHHHHHcCCeEEEecCCCCC---------CCCceeC
Confidence 999999999999999988775 3588763
No 214
>PRK09181 aspartate kinase; Validated
Probab=99.59 E-value=1e-14 Score=161.46 Aligned_cols=166 Identities=18% Similarity=0.156 Sum_probs=121.8
Q ss_pred hHHHhccHHHHHHHHHHHhhhCCCccceEEecccccCchhHhhhHHHHHHHHHh----CCCeeEEcCCCceecCCCCCCC
Q 005798 54 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLD----LRVIPIFNENDAVSTRKAPYED 129 (676)
Q Consensus 54 ~~~~avG~~~~~~~~~~~l~~~g~~~~q~l~~~~d~~~~~~~~~~~~~i~~ll~----~g~iPVi~~~d~v~~~~~~~~~ 129 (676)
+.+.+.|+..+..+++.+|+..|++...+-.+ ++....... ..+.+...++ .+.|||++|+. ... .+.-
T Consensus 140 D~l~s~GE~lSa~lla~~L~~~Gi~a~~ld~~--~~~~~~~~~-~~~~i~~~l~~~~~~~~v~Vv~GF~--~~~--~G~i 212 (475)
T PRK09181 140 EMLASIGEAHSAFNTALLLQNRGVNARFVDLT--GWDDDDPLT-LDERIKKAFKDIDVTKELPIVTGYA--KCK--EGLM 212 (475)
T ss_pred HHHhhHhHHHHHHHHHHHHHhCCCCeEEeccc--cccCCcccc-hHHHHHHHHhhhccCCcEEEecCCc--CCC--CCCE
Confidence 67888999998899999999999986532111 121111111 1334444444 57899999842 121 1111
Q ss_pred CCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-C--CCCceeceeehhchHHHHhcCCCCcccccchHHHHHH
Q 005798 130 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNA 206 (676)
Q Consensus 130 ~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~--~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~a 206 (676)
+.+.++++|++|+++|.+|+||.+.|||||+ ||++||+ . |++++|++|||+|+.++...|+ .-+ ..++
T Consensus 213 tTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i~~lsy~Ea~ELA~~GA------kVL--Hp~t 283 (475)
T PRK09181 213 RTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPIGRTNYDVADQLANLGM------EAI--HPKA 283 (475)
T ss_pred EecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEcCccCHHHHHHHHHcCc------hhc--CHHH
Confidence 2234599999999999999999999999997 9999996 6 7999999999999998666543 334 4469
Q ss_pred HHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 207 AYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 207 a~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
...|.+++||++|.|.++|+ ..||+|...
T Consensus 284 i~pa~~~~Ipi~V~nt~~p~---------~~GT~I~~~ 312 (475)
T PRK09181 284 AKGLRQAGIPLRIKNTFEPE---------HPGTLITKD 312 (475)
T ss_pred HHHHHHcCCeEEEecCCCCC---------CCCeEEecC
Confidence 99999999999999988764 369999754
No 215
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=99.58 E-value=1.3e-14 Score=171.17 Aligned_cols=172 Identities=19% Similarity=0.222 Sum_probs=129.7
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccc-----eEEecccccCchhH-hhhHHHHHHHHH-hCCCeeEEcCCCceecCCC
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDF-RKQLYDTVQSLL-DLRVIPIFNENDAVSTRKA 125 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~-----q~l~~~~d~~~~~~-~~~~~~~i~~ll-~~g~iPVi~~~d~v~~~~~ 125 (676)
.+.+.+.|+..+..++...|++.|++.. ++++|+++|.+... .....+.+..++ +.+.|||++|+-+....
T Consensus 119 ~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~~~~~~~~~~~~~~~~~i~~~~~~~~~v~Vv~Gfig~~~~-- 196 (819)
T PRK09436 119 NAAIISRGERLSIAIMAAVLEARGHDVTVIDPRELLLADGHYLESTVDIAESTRRIAASFIPADHVILMPGFTAGNEK-- 196 (819)
T ss_pred hhheeeHHHHHHHHHHHHHHHhCCCCeEEECHHHeEEecCCCCCceechHhhHHHHHHHHhcCCcEEEecCcccCCCC--
Confidence 4677888999988899999999998754 44677666554322 111234555544 46889999983221110
Q ss_pred CCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCC-CCCCceeceeehhchHHHHhcCCCCcccccchHHHH
Q 005798 126 PYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 204 (676)
Q Consensus 126 ~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~-~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~ 204 (676)
+......++++|++|+.+|..|+||.|++||||||||++||+ +|++++|++|+|+|+.++... |-++.++
T Consensus 197 -G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~tdVdGvyt~DP~~~~~A~~i~~isy~ea~el~~~--------G~kvlhp 267 (819)
T PRK09436 197 -GELVTLGRNGSDYSAAILAACLDADCCEIWTDVDGVYTADPRVVPDARLLKSLSYQEAMELSYF--------GAKVLHP 267 (819)
T ss_pred -CCEEEeCCCCchHHHHHHHHHcCCCEEEEEECCCceECCCCCCCCCCeEeeEecHHHHHHHHhc--------CCccchH
Confidence 001112248899999999999999999999999999999995 899999999999999875442 3457788
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 205 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 205 ~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
+++..|.++|||++|.|+++|+ ..||+|...
T Consensus 268 ~a~~~a~~~~Ipi~i~n~~~p~---------~~GT~I~~~ 298 (819)
T PRK09436 268 RTIAPIAQFQIPCLIKNTFNPQ---------APGTLIGAE 298 (819)
T ss_pred HHHHHHHHCCceEEEccCCCCC---------CCceEEEec
Confidence 9999999999999999998875 358888654
No 216
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism]
Probab=99.39 E-value=1.2e-12 Score=134.27 Aligned_cols=172 Identities=17% Similarity=0.233 Sum_probs=124.7
Q ss_pred hhHHHhccHHHHHHHHHHHhhhCCCccceE------EecccccCchhHhhhHHHHHHHH-----HhCCCeeEEcCCCcee
Q 005798 53 GKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSL-----LDLRVIPIFNENDAVS 121 (676)
Q Consensus 53 ~~~~~avG~~~~~~~~~~~l~~~g~~~~q~------l~~~~d~~~~~~~~~~~~~i~~l-----l~~g~iPVi~~~d~v~ 121 (676)
++.+.++|++.+.+.+...++..|....|+ ..+.++|.+.....-.......+ ...+.+||+.|.-.-.
T Consensus 192 rD~lvs~GE~lS~rf~aA~lnd~G~kar~~D~~~I~~~~~d~~t~~d~~~a~~~av~k~~~~~~aken~VPVvTGf~Gk~ 271 (559)
T KOG0456|consen 192 RDYLVSFGECLSTRFFAAYLNDIGHKARQYDAFEIGFITTDDFTNDDILEATYPAVSKLLSGDWAKENAVPVVTGFLGKG 271 (559)
T ss_pred hhHhhhhhhHHHHHHHHHHHHhcCccceeechhheeccccccccchhHHHHHHHHHHHhcccccccCCccceEeeccccC
Confidence 556788899998899999999999987765 34445555433221111111122 2456799999732211
Q ss_pred cCCCCCC-CCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCC-CCCCCceeceeehhchHHHHhcCCCCcccccc
Q 005798 122 TRKAPYE-DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 199 (676)
Q Consensus 122 ~~~~~~~-~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP-~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~gg 199 (676)
+ |.. -++..++.+|..|+.+|.+|++|.+.+|.|||||++.|| ++|.+++++.+|++|+.++..+|+.
T Consensus 272 ~---~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELaYfGaq------- 341 (559)
T KOG0456|consen 272 W---PTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELAYFGAQ------- 341 (559)
T ss_pred c---cccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHHhhhhh-------
Confidence 1 110 133446899999999999999999999999999999999 5999999999999999987665532
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceeeEEecC
Q 005798 200 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 244 (676)
Q Consensus 200 M~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT~i~~~ 244 (676)
+.+......+.+..|||.|-|..+|- ..||+|.++
T Consensus 342 -VlHP~sM~~~~~~~IPvRvKN~~NP~---------~~GTvI~~d 376 (559)
T KOG0456|consen 342 -VLHPFSMRPAREGRIPVRVKNSYNPT---------APGTVITPD 376 (559)
T ss_pred -hccccccchhhccCcceEeecCCCCC---------CCceEeccc
Confidence 23345666788889999999987773 469999877
No 217
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.30 E-value=2.2e-09 Score=117.18 Aligned_cols=244 Identities=15% Similarity=0.148 Sum_probs=166.7
Q ss_pred EEEEeeceeEEEEEcCCC-hhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEec--C-CC
Q 005798 357 LEKTSCPLGVLLIVFESR-PDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--S-RE 431 (676)
Q Consensus 357 ~~~~~~PlGVV~~I~p~~-P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~a-lP~gv~~~v~--~-~~ 431 (676)
.+.++.|.|+|+.|.|-| |.+.++.++.+|.+||..|+|+|...|.++..|++.+.+...+. +- ..+.++. + ..
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~-~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLA-DSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhh-hcEEEEEecCCch
Confidence 467789999999999965 88999999999999999999999999999999999887632221 11 3455663 3 44
Q ss_pred hhhhhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEeecCCc-ceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceE
Q 005798 432 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETL 508 (676)
Q Consensus 432 ~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGGk-~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv 508 (676)
.+.+.+.. ..|.|..+||.++.+.|.+... .+-.+.-|-| +-.|+..+++++++++.+..=.+...| .|.|++.+
T Consensus 160 ~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 160 ELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred HHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 56666653 5999999999999999987543 4444554444 668888888999999888776654445 99999999
Q ss_pred EEeC---ccCChhHHHHHHHHHHhcCcEEe-cCcc----c-------c-----------ccc--c-----C--CCCCccc
Q 005798 509 LVHK---DLACNGALNELVVELQHEGVGLF-GGPR----A-------S-----------KLL--Q-----I--PETRLFH 553 (676)
Q Consensus 509 ~V~~---~i~d~~f~~~l~~~~~~~~~~~~-g~~~----~-------~-----------~~~--p-----v--~~~~~~~ 553 (676)
||.. .-. ++|.++|.+++++..-.+- +... . . ..+ + | .+.....
T Consensus 238 fv~~g~~~~~-~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~ 316 (399)
T PF05893_consen 238 FVETGDGDSV-EEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPEPPLL 316 (399)
T ss_pred EEECCCcccH-HHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCCcccc
Confidence 9983 334 5888888777775421100 0000 0 0 000 0 1 1111122
Q ss_pred ccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHh-ccCee
Q 005798 554 HEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC-QVDSA 605 (676)
Q Consensus 554 eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~-~l~~G 605 (676)
..-++=.+.|.++++.+|++..+|....=-|.+++... ++...+++ -...|
T Consensus 317 ~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 317 PSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred cCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 22234478899999999999999988421467776544 44555555 33444
No 218
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only]
Probab=99.04 E-value=4.6e-09 Score=98.08 Aligned_cols=117 Identities=21% Similarity=0.270 Sum_probs=88.3
Q ss_pred hCCCeeEEcCCCc-eecCCCCCCCCCcee-cchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchH
Q 005798 107 DLRVIPIFNENDA-VSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQ 184 (676)
Q Consensus 107 ~~g~iPVi~~~d~-v~~~~~~~~~~~~~~-~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~ 184 (676)
+.+.+||+-|.-- -.+++.|+ .+ +.+|.+|..+|+.+++.++++.|||||||+.+| +++++++|+..|+.
T Consensus 91 ~~~~~aVLLPyrlLr~~DplpH-----SW~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~---~~kLv~eI~A~dl~ 162 (212)
T COG2054 91 KPDAKAVLLPYRLLRKTDPLPH-----SWEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDP---KGKLVREIRASDLK 162 (212)
T ss_pred CcccceEeeehHhhhcCCCCCc-----ceeecccHHHHHHHHHcCCcEEEEEecCCcccccCC---cchhhhhhhHhhcc
Confidence 4456677755211 12233333 34 999999999999999999999999999999965 56899999987776
Q ss_pred HHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCC-ceeeEEec
Q 005798 185 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK-RVGTLFHR 243 (676)
Q Consensus 185 ~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~-~iGT~i~~ 243 (676)
. +. ..-.+-.|+ .+.++++.++|+||+.|+++..++.|+ .+||.+..
T Consensus 163 ~----~~---t~vD~~~P~-----Ll~k~~m~~~Vvng~~pervi~~lrGk~~v~T~Ivg 210 (212)
T COG2054 163 T----GE---TSVDPYLPK-----LLVKYKMNCRVVNGKEPERVILALRGKEVVGTLIVG 210 (212)
T ss_pred c----Cc---ccccchhhH-----HHHHcCCceEEECCCCHHHHHHHHhccccceEEEeC
Confidence 3 11 123344566 678899999999999999998888885 67998864
No 219
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism]
Probab=98.81 E-value=8.9e-09 Score=110.38 Aligned_cols=223 Identities=20% Similarity=0.217 Sum_probs=135.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHhHH--hccccccccccccc-ccCccccchhhHHH-hccHHHHHHHHHHHhhhCCC
Q 005798 2 ICLQLKELNSQGFEIILVSSGAVGVGRQ--RLRYRKLVNSSLAD-LQKPQNELDGKACA-AVGQSSLMALYDTLFSQLDV 77 (676)
Q Consensus 2 ~~~~I~~l~~~G~~vviVhgGg~~i~~~--~l~~~~~~~~~~~~-l~~~~~~l~~~~~~-avG~~~~~~~~~~~l~~~g~ 77 (676)
++++++.|+..|.++|||||+++|+++. ..++++ ++.+ .|.|+....+.+-. .+|+.... ++ ..++++|-
T Consensus 114 l~s~lafl~h~gl~pIvv~g~~~qin~~l~~~~ie~----~y~~~~RvTda~t~q~~~~~~~~E~n~~-lv-~nL~~~g~ 187 (520)
T KOG2436|consen 114 LASDLAFLHHVGLRPIVVPGTQPQINRLLAERGIEP----EYVDGYRVTDAHTLQAAKESVSLEANLN-LV-INLSQLGT 187 (520)
T ss_pred HHHHHHHHhcCCceEEEecCccHHHHHHHHHcCCCc----ccccceecccHHHHHHhhhcchhhhhhH-HH-HHHHHhhc
Confidence 5789999999999999999999999983 223333 2333 66666322111111 33333311 11 12333331
Q ss_pred c-----cc----eE-------Eecccc--cCchhHhhhHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCcee-cchh
Q 005798 78 T-----SS----QL-------LVTDSD--FRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDND 138 (676)
Q Consensus 78 ~-----~~----q~-------l~~~~d--~~~~~~~~~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~-~~~D 138 (676)
. .. .. ++...+ +.+....++ .+.|+.+++.|.+|++.- ++-. .+|..+ +|+|
T Consensus 188 ~ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd-~d~i~~l~~~G~mp~L~s---la~T-----aSGqvlnvNa~ 258 (520)
T KOG2436|consen 188 RARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVD-VDRIRHLLDAGSMPLLRS---LAAT-----ASGQVLNVNAD 258 (520)
T ss_pred eeccccccccccceeecccccccccceeeeecccceec-hhhhhhhhhCCCchhehh---hccc-----CccceEEeeHH
Confidence 1 11 00 111112 335555666 789999999999999874 2221 266666 9999
Q ss_pred HHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEE
Q 005798 139 SLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVV 218 (676)
Q Consensus 139 ~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~ 218 (676)
.+|..+|.+|+|++++.++|+ |...+ ++++.++.++.+|....+..-+-...++++|++++..+..+..-...-+
T Consensus 259 ~~a~elA~~L~~~kli~l~d~-g~~l~----e~ge~~S~l~l~~e~~~l~k~~qq~~~a~~~v~aV~~~~~~~~p~~~s~ 333 (520)
T KOG2436|consen 259 EVAGELALALGPDKLILLMDK-GRILK----ENGEDISSLILQEEDAGLRKPSQQKNIAANNVKAVKDGIDSSLPRPSSY 333 (520)
T ss_pred HHhhHHHhccCcceeEEeccc-ccccc----cCcccccccccchhHhhhhhhhhhcccccccchhhhhheeeccCcCCCC
Confidence 999999999999999999998 53322 3467888888766554333222123678888888877776633222223
Q ss_pred EEeCCCcchH-HHHHhCCceeeEEecC
Q 005798 219 ITSGFAMDSI-IKVLEGKRVGTLFHRD 244 (676)
Q Consensus 219 I~~g~~~~~i-~~~~tg~~iGT~i~~~ 244 (676)
........+. ..+++++..||.+...
T Consensus 334 ~i~~~t~~n~~~~~~te~G~~t~~~~g 360 (520)
T KOG2436|consen 334 NIAITTQQNLIKELFTEKGAGTLISGG 360 (520)
T ss_pred CcceeecccccceeeccCCCCccccCc
Confidence 3333334443 5567777677776654
No 220
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=98.81 E-value=1.7e-09 Score=96.08 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=65.6
Q ss_pred CCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCC
Q 005798 547 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 614 (676)
Q Consensus 547 ~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~ 614 (676)
|+|.++.||+||||+..+.-+++||||.++|+++||-...|||.|.+.++++.+..++|.+.+|.+..
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 78999999999999999999999999999999999999999999999999999999999999998653
No 221
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=98.45 E-value=1.4e-06 Score=85.13 Aligned_cols=171 Identities=15% Similarity=0.102 Sum_probs=113.6
Q ss_pred EEEcCCCCHHHHHHHHHHhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCc--------------------EEe
Q 005798 476 VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------GLF 535 (676)
Q Consensus 476 ~iV~~dADl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------------------~~~ 535 (676)
+||++|.||+.|+..++.+.- |.=...+.--|+|||+|. |+|+++++.+++.+.- +..
T Consensus 8 MIvfe~GDlnsA~~~L~~sl~-~Pf~~~~VatVlVqEsir-eefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~~I 85 (215)
T PF07368_consen 8 MIVFEDGDLNSAMHYLLESLH-NPFAPGAVATVLVQESIR-EEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAKTI 85 (215)
T ss_pred EEEEeCCCHHHHHHHHHHHHh-CcccCCcEEEEEEeHHHH-HHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCeEE
Confidence 899999999999999998854 322344667899999999 7999999998876522 111
Q ss_pred -cCccccc--ccc--CCCCCccccccc----CceEEEEEeCCHHHHHHHHHcc--CCCceeEEEecCHHHHHHHHhccCe
Q 005798 536 -GGPRASK--LLQ--IPETRLFHHEYN----SMVCTVEIVDDVRAAIDHIHQH--GSAHTDCIVAEDQKVAETFLCQVDS 604 (676)
Q Consensus 536 -g~~~~~~--~~p--v~~~~~~~eE~F----GPVl~i~~~~~~deAi~~aN~~--~~GL~a~vft~d~~~a~~~~~~l~~ 604 (676)
++..... --| |.+ +..-.| .+|+++-+|++..||+++++.. +|+ +.|||++..+.+..++.++++
T Consensus 86 ~~~~~~~~~~aSPilV~d---~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~~ 161 (215)
T PF07368_consen 86 VADFENVPPPASPILVCD---FTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLPC 161 (215)
T ss_pred EecccCCCCCCCCEEEcC---CCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCCC
Confidence 1110000 002 110 122233 3599999999999999999975 666 899999999999999999999
Q ss_pred eeEEEcCCCCC-CCCCcc-cCcccc-cccccccccccccchhcceeEEEEEEcCc
Q 005798 605 AAVFHNASTRF-CDGARF-GLGAEV-GISTSRIHARGPVGVEGLLTTRWILRGNG 656 (676)
Q Consensus 605 G~v~iN~~~~~-~~~~pf-G~g~~~-G~~~~~~~~~g~~g~~~ft~~k~v~~~~~ 656 (676)
-.++||+.... .+-.++ .-.+.. =+. .++| -+.+.-.-+.|.|.++.+
T Consensus 162 ~~f~iNC~~V~L~PI~~~~~~~~~~v~i~-~gyH---YE~l~~~~~~k~IVFP~~ 212 (215)
T PF07368_consen 162 DTFYINCFNVDLSPIMPFFAARKNDVLIA-NGYH---YETLTIGGKRKIIVFPIG 212 (215)
T ss_pred CEEEEEeccCCchhhhhhhhcCCceEEEE-CCee---EEEEEECCeEEEEEEecc
Confidence 99999986532 222222 211110 011 1222 134556667777777544
No 222
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=97.87 E-value=4.4e-05 Score=93.81 Aligned_cols=101 Identities=13% Similarity=0.192 Sum_probs=74.2
Q ss_pred CcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCChh
Q 005798 354 GLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 433 (676)
Q Consensus 354 ~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~~~~~ 433 (676)
|........|.|+|++|+||+.. .+..++.||++||+||+||++.++. .++. +|..+.+.+. +
T Consensus 1069 GEsN~L~l~~RG~vlcisp~~~~-~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~~-----Lp~~~~~~~~----~ 1131 (1208)
T PRK11905 1069 GESNLLSLHPRGRVLCVADTEEA-LLRQLAAALATGNVAVVAADSGLAA-------ALAD-----LPGLVAARID----W 1131 (1208)
T ss_pred CcceeEEecCCceEEEECCcHHH-HHHHHHHHHHhCCEEEEeCCcccHH-------HHHh-----Cccccccccc----c
Confidence 44556678999999999999843 3456778999999999999998762 2211 7776666663 2
Q ss_pred hhhhcCCCCccEEEeecCHHHHHHHHHhc----C--CCEEeecC
Q 005798 434 PDLLKLDDVIDLVIPRGSNKLVSQIKEST----K--IPVLGHAD 471 (676)
Q Consensus 434 ~~~l~~~~~v~~v~fTGS~~~g~~i~~~a----~--~~~~lElG 471 (676)
++.+..+++|+.|.||||+++.+.+.++. + .|++.|..
T Consensus 1132 ~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1132 TQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 33456677899999999999999886653 1 55655553
No 223
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=96.51 E-value=0.9 Score=49.57 Aligned_cols=283 Identities=15% Similarity=0.152 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCE--EEEeCC
Q 005798 324 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 397 (676)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps 397 (676)
-++.+.+.++.|.....+..... ....+|.....++.|+--|++..|- +|...++.+.||-.||.. |+.-|.
T Consensus 69 Ai~~A~~~I~~fh~~q~~~~~~~--~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp 146 (412)
T PF00815_consen 69 AIEQAAENIRAFHEAQLPKKDWE--VETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 146 (412)
T ss_dssp HHHHHHHHHHHHHHTT-----EE--EEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-S
T ss_pred HHHHHHHHHHHHHHHhcCCCCcE--EEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCC
Confidence 45566666776654322211100 0112466677889999999999992 466667778899999975 455554
Q ss_pred cc----hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhhc----CCCCccEEEeecCHHH--HHHHHHh-cCCC
Q 005798 398 KE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKES-TKIP 465 (676)
Q Consensus 398 ~~----tp~t~~~l~~l~~~al~~alP~gv~~~v~-~~~~~~~~l~----~~~~v~~v~fTGS~~~--g~~i~~~-a~~~ 465 (676)
.. .|.+- .-+++ .|+=.+.. |+...-.+|. +=|+||+|+=-|..-| +|+.... .++-
T Consensus 147 ~~~G~i~p~vL-~Aa~~----------~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID 215 (412)
T PF00815_consen 147 PKDGKINPAVL-AAAHL----------AGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID 215 (412)
T ss_dssp S------HHHH-HHHHH----------TT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES
T ss_pred CccCCCCHHHH-HHHHH----------cCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC
Confidence 43 34331 11122 14545555 5443222222 2378999988787644 3333222 1211
Q ss_pred EEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCc-cccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccc
Q 005798 466 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL 544 (676)
Q Consensus 466 ~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~ 544 (676)
. +.+..---+|-|++||.+..+..++.-+=.... .| ++|..+ +++.+++.++++++-..+ ++.
T Consensus 216 ~-~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~a~~-----vLvt~s---~~la~~V~~~v~~~l~~l---~r~---- 279 (412)
T PF00815_consen 216 M-IAGPSEVLVIADETANPEFVAADLLAQAEHDPDAQA-----VLVTTS---EELAEAVEAEVERQLEEL---PRR---- 279 (412)
T ss_dssp -------EEEEEE-TTS-HHHHHHHHHHHHTT-TT-EE-----EEEES----HHHHHHHHHHHHHHHTT----TTH----
T ss_pred C-CCCCCceEEEECCCCCHHHHHHHHHHHhccCCCCce-----EEEECC---HHHHHHHHHHHHHHHHhC---Cch----
Confidence 1 111111225557789999988888776554433 33 455443 255555655555320000 110
Q ss_pred cCCCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhc-cCeeeEEEcCCCCC-------C
Q 005798 545 QIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF-------C 616 (676)
Q Consensus 545 pv~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~-l~~G~v~iN~~~~~-------~ 616 (676)
.+ -++.+. --.++-++|++||++++|..-- =-..|.++|... +..+ -.+|.|++...+.. .
T Consensus 280 -----~i-~~~sl~-~g~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~~~---~~~~i~~AGaiFlG~~tp~a~GDY~aG 348 (412)
T PF00815_consen 280 -----EI-AEKSLE-NGAIIVVDSLEEAIELANEYAP-EHLELQVEDPEE---LLEKIRNAGAIFLGEYTPEALGDYAAG 348 (412)
T ss_dssp -----HH-HHHHHT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHHH---HGGG--S-SEEEESTT--HHHHHHTSS
T ss_pred -----HH-HHHHHH-CCeEEEECCHHHHHHHHHHhhH-HHHHHHHcCHHH---HHHHhhccChhhcCCCCCHHHhhhccC
Confidence 01 122233 3357789999999999999763 345789999754 4444 57899999976531 1
Q ss_pred CCCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 617 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 617 ~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
++.-++. +|.. +..|..+...|...-++..
T Consensus 349 pNHvLPT---~G~A----R~~sgLsv~~FlK~~s~~~ 378 (412)
T PF00815_consen 349 PNHVLPT---GGTA----RFSSGLSVDDFLKRISVQR 378 (412)
T ss_dssp S---------TTGG----GT---S-GGGGEEEEEEEE
T ss_pred CCccCCC---Cccc----cccCCCcHHHccceeeEEE
Confidence 1111111 1111 2346677888888766543
No 224
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=95.91 E-value=2 Score=46.69 Aligned_cols=283 Identities=14% Similarity=0.155 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCE--EEEeCC
Q 005798 324 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 397 (676)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps 397 (676)
-++.+.++++.+.....+...... ..+|...-.++.|+--|++..|- +|...++.+.||-.||+. |+.-|.
T Consensus 56 ai~~A~~nI~~fh~~q~~~~~~~~---~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 56 AIELAAENIRAFHEAQLPKDWEVE---TEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEE---eCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 355556666665532222211111 12466777889999999999992 566667777899999975 445555
Q ss_pred c----chHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhhc----CCCCccEEEeecCHHHH--HHHHHh-cCCC
Q 005798 398 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKLV--SQIKES-TKIP 465 (676)
Q Consensus 398 ~----~tp~t~~~l~~l~~~al~~alP~gv~~~v~-~~~~~~~~l~----~~~~v~~v~fTGS~~~g--~~i~~~-a~~~ 465 (676)
. -.|.+- ..++++ |+=.+.. |+...-.+|. +-|.||+|+=-|..-+. |+.... .++-
T Consensus 133 ~~~g~i~p~iL-~aa~~~----------Gv~eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V~ID 201 (390)
T cd06572 133 RKDGKINPAIL-AAAKLA----------GVDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDVGID 201 (390)
T ss_pred CCCCCCCHHHH-HHHHHc----------CCcEEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCcCcc
Confidence 3 234332 222332 4555555 5543333332 35789999877766442 222111 1111
Q ss_pred EEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCcccccccc
Q 005798 466 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ 545 (676)
Q Consensus 466 ~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p 545 (676)
.+ .+..---+|.|++||.+..+..++.-+=.... ..-++|..+ .++.+++.++++++-..+ ++.
T Consensus 202 ~~-AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~----a~aiLvT~s---~~la~~V~~~v~~ql~~l---~r~----- 265 (390)
T cd06572 202 MP-AGPSEVLVIADETANPEFVAADLLSQAEHDPD----SQAILVTTS---EELAEAVEEEVERQLAEL---PRR----- 265 (390)
T ss_pred CC-CCCceEEEEeCCCCCHHHHHHHHHhhhccCCC----CeEEEEECC---HHHHHHHHHHHHHHHHhC---CcH-----
Confidence 11 11111224556679999988888765443322 112455433 345555555544321000 110
Q ss_pred CCCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC--C-----CC
Q 005798 546 IPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--C-----DG 618 (676)
Q Consensus 546 v~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~-----~~ 618 (676)
.+..+.+ .---.|+-++|+|||++++|..- +--.-|.++|... .+.+--.+|.|++-..+.. . ++
T Consensus 266 ----~~~~~~~-~~~g~ii~~~~~~eai~~~N~~A-PEHLel~~~~~~~--~l~~i~nAGsiFlG~~tp~a~GDY~aGpN 337 (390)
T cd06572 266 ----EIAAKSL-LDYGAIILVDDLEEAIELANEYA-PEHLELQTEDPEE--LLEKIRNAGSIFLGPYTPEALGDYAAGPN 337 (390)
T ss_pred ----HHHHHHH-HhCCEEEEECCHHHHHHHHHhhc-hhhheeHhcCHHH--HHhhCccceEEeecCCCchhhhccccCCC
Confidence 0111111 11224577899999999999975 3345788999865 2333457899999765431 1 11
Q ss_pred --CcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 619 --ARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 619 --~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+|-+ |.. +..|..+...|...-++..
T Consensus 338 HvLPT~-----G~A----r~~sgL~v~~F~K~~s~~~ 365 (390)
T cd06572 338 HVLPTG-----GTA----RFYSGLSVDDFLKRITVQE 365 (390)
T ss_pred CccCCC-----cce----eecCCCCHHHheecceeEE
Confidence 1221 221 2346678888888766543
No 225
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=95.60 E-value=4.6 Score=44.34 Aligned_cols=283 Identities=15% Similarity=0.160 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCE--EEEeCC
Q 005798 324 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 397 (676)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps 397 (676)
-++.+.+.++.+.+...+...... ..+|...-.++.|+--|++..|. +|...++.+.||-.||+. |+.-|.
T Consensus 84 ai~~A~~~I~~Fh~~q~~~~~~~~---~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 84 ALEEAAENIRAFHEAQKPESWDVE---TAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEE---ecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 455566666666533222111110 12456666788999999999994 566667778899999975 445555
Q ss_pred c---chHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhh----cCCCCccEEEeecCHHH--HHHHHHh-cCCCE
Q 005798 398 K---EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 466 (676)
Q Consensus 398 ~---~tp~t~~~l~~l~~~al~~alP~gv~~~v~-~~~~~~~~l----~~~~~v~~v~fTGS~~~--g~~i~~~-a~~~~ 466 (676)
. -.|.+- ..++++ |+=.+.. |+...-.+| .+=|+||+|+=-|..-| +|+.... .++-.
T Consensus 161 ~~g~i~p~vL-~AA~~~----------Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 229 (425)
T PRK00877 161 PDGEINPAIL-AAAALA----------GVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGIDM 229 (425)
T ss_pred CCCCCCHHHH-HHHHHc----------CCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcCC
Confidence 2 234332 222322 4444554 554332232 23468999988887644 3332211 12211
Q ss_pred EeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccccC
Q 005798 467 LGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI 546 (676)
Q Consensus 467 ~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv 546 (676)
+ .+..---+|-|++||.+..+..++.-+=.... ..-++|..| .++.+++.+++++.-..+ ++.
T Consensus 230 ~-AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a~aiLvT~s---~~la~~V~~~v~~ql~~l---~r~------ 292 (425)
T PRK00877 230 I-AGPSEILVIADETADPDFVAADLLSQAEHDPD----AQSILVTTS---EELAEAVAAEVERQLATL---PRA------ 292 (425)
T ss_pred C-CCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC---ChH------
Confidence 1 11111124446679999998888876544322 112444333 244444544444320000 110
Q ss_pred CCCCcccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCCC--C-----C
Q 005798 547 PETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--C-----D 617 (676)
Q Consensus 547 ~~~~~~~e--E~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~-----~ 617 (676)
.+.++ |-|| .|+-++|+|||++++|..-- --..|.++|.... +.+=-.+|.|++-..+.. . +
T Consensus 293 ---~ia~~sl~~~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p~~~--l~~I~nAGaiFlG~~tp~a~GDY~aGp 363 (425)
T PRK00877 293 ---EIARASLEGQG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDPRAL--LDRIRNAGAIFLGPYTPESLGDYAAGP 363 (425)
T ss_pred ---HHHHHHHHhCC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHHHH--HhhcCccceeccCCCCchhhhhcccCC
Confidence 01111 1144 35778999999999999753 3346889998542 233457899999654421 1 1
Q ss_pred CCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 618 GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 618 ~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+.-++. +|.. +..|..+...|...-++..
T Consensus 364 NHvLPT---~G~A----R~~sgLsV~~F~K~~s~~~ 392 (425)
T PRK00877 364 NHVLPT---SGTA----RFSSGLSVYDFLKRSSVIE 392 (425)
T ss_pred CcccCC---Ccce----eecCCccHHHhccceeEEE
Confidence 111111 1221 2346678888887766543
No 226
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=94.99 E-value=4.1 Score=44.20 Aligned_cols=255 Identities=15% Similarity=0.146 Sum_probs=138.7
Q ss_pred CCcEEEEEeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCE--EEEeCCc----chHHHHHHHHHHHHHhcccccCcC
Q 005798 353 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGK----EAMRSNAILHKVITSAIPDTVGEK 422 (676)
Q Consensus 353 ~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps~----~tp~t~~~l~~l~~~al~~alP~g 422 (676)
+|...-.++.|+--|++..|. +|...++.+.||-.||+. |+.-|.. -.|.+- ..++++ |
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL-~AA~~~----------G 146 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVL-AAAKLA----------G 146 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHH-HHHHHc----------C
Confidence 456667889999999999994 566666777899999975 4445552 234332 222322 4
Q ss_pred ceEEec-CCChhhhhh----cCCCCccEEEeecCHHH--HHHHHHh-cCCCEEeecCCcceEEEcCCCCHHHHHHHHHHh
Q 005798 423 LIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPVLGHADGICHVYVDKSANLDVAKNIVIDA 494 (676)
Q Consensus 423 v~~~v~-~~~~~~~~l----~~~~~v~~v~fTGS~~~--g~~i~~~-a~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~ 494 (676)
+=.+.. |+...-.+| .+=|+||+|+=-|..-+ +|+.... .++-.+ .+..---+|-|++||.+..+..++.-
T Consensus 147 v~eIy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~-AGPSEvlViAD~~Anp~~iAaDLLaQ 225 (393)
T TIGR00069 147 VDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGDVGIDMP-AGPSEVLVIADETANPEFVAADLLSQ 225 (393)
T ss_pred CCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCCC-CCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 445554 554322222 23478999988787654 2332111 112111 11112224556679999988888766
Q ss_pred cCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccccCCCCCcccccc--cCceEEEEEeCCHHHH
Q 005798 495 KIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEY--NSMVCTVEIVDDVRAA 572 (676)
Q Consensus 495 ~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~--FGPVl~i~~~~~~deA 572 (676)
+=.... ..-++|..+ .++.+++.+++++.-..+ ++. .+.++-+ +| .|+-++|+|||
T Consensus 226 AEHd~~----a~~iLvT~s---~~la~~V~~~v~~ql~~l---~r~---------~i~~~al~~~g---~ii~v~~l~ea 283 (393)
T TIGR00069 226 AEHDPD----AQAILVTTS---EELAEAVQEEIERQLATL---PRR---------EIARKSLEDNG---AIILVDDLEEA 283 (393)
T ss_pred hccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC---ChH---------HHHHHHHHhCC---EEEEECCHHHH
Confidence 544322 112445332 244444444443320000 110 1111111 33 35778999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHh-ccCeeeEEEcCCCCC--CC-----CCcccCcccccccccccccccccchhc
Q 005798 573 IDHIHQHGSAHTDCIVAEDQKVAETFLC-QVDSAAVFHNASTRF--CD-----GARFGLGAEVGISTSRIHARGPVGVEG 644 (676)
Q Consensus 573 i~~aN~~~~GL~a~vft~d~~~a~~~~~-~l~~G~v~iN~~~~~--~~-----~~pfG~g~~~G~~~~~~~~~g~~g~~~ 644 (676)
++++|..--= -.-|.++|... +.. =-.+|.|++-..+.. .+ +.-++. +|.. +..|..+.+.
T Consensus 284 ~~~~N~~APE-HLel~~~~p~~---~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT---~G~A----r~~sgL~v~~ 352 (393)
T TIGR00069 284 IEISNDYAPE-HLELQTKNPEE---LLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPT---GGTA----RFYSGLSVLD 352 (393)
T ss_pred HHHHHhhChH-hheehhCCHHH---HHhhcCccceeccCCCCchhhhhccCCCCcccCC---Ccce----eecCCccHHH
Confidence 9999987533 34688888754 343 356899999765431 11 100111 1211 2346677888
Q ss_pred ceeEEEEE
Q 005798 645 LLTTRWIL 652 (676)
Q Consensus 645 ft~~k~v~ 652 (676)
|...-++.
T Consensus 353 F~K~~s~~ 360 (393)
T TIGR00069 353 FLKRITVQ 360 (393)
T ss_pred hccceeEE
Confidence 88776654
No 227
>PLN02926 histidinol dehydrogenase
Probab=94.61 E-value=8.8 Score=42.22 Aligned_cols=282 Identities=15% Similarity=0.145 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHhcccccccc-cccccccCCCcEEEEEeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCE--EEEeC
Q 005798 324 KISSLAKSIRILADMEEPIGQ-ILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKG 396 (676)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKp 396 (676)
-++.+.++++.+.....+... .. ...+|...-.++.|+.-|++..|. +|...++.+.||-.||+. |+.-|
T Consensus 83 ai~~A~~nI~~fh~~q~~~~~~~~---~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TP 159 (431)
T PLN02926 83 AFDVAYDNIYAFHLAQKSTEKLEV---ETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATP 159 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCCcceE---ecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEEC
Confidence 345556666665432222111 11 012456667889999999999994 566667778899999975 55556
Q ss_pred Ccc----hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhh----cCCCCccEEEeecCHHH--HHHHHHhcCCC
Q 005798 397 GKE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKESTKIP 465 (676)
Q Consensus 397 s~~----tp~t~~~l~~l~~~al~~alP~gv~~~v~-~~~~~~~~l----~~~~~v~~v~fTGS~~~--g~~i~~~a~~~ 465 (676)
... .|.+- ..++++ |+=.+.. |+...-.+| .+=|+||+|+=-|..-| +|+... +.+
T Consensus 160 p~~~g~i~p~iL-~AA~~~----------Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--G~~ 226 (431)
T PLN02926 160 PRKDGSICPEVL-YCAKKA----------GVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQ--NSE 226 (431)
T ss_pred CCcCCCCCHHHH-HHHHHc----------CCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhh--CCC
Confidence 532 34332 122222 4445555 554322222 23468999988887654 333211 220
Q ss_pred --E-EeecCCcc--eEEEcCCCCHHHHHHHHHHhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccc
Q 005798 466 --V-LGHADGIC--HVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRA 540 (676)
Q Consensus 466 --~-~lElGGk~--p~iV~~dADl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~ 540 (676)
| +=-+-|-+ -+|-|++||.+.++..++.-+=.... ..-++|..+ .++.+++.++++++-..+ ++
T Consensus 227 ~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAEHdp~----a~aiLvT~s---~~la~~V~~~v~~ql~~l---~r- 295 (431)
T PLN02926 227 AMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAEHGPD----SQVVLVAVG---DVDLDAIEEEVEKQCQSL---PR- 295 (431)
T ss_pred CccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC---Ch-
Confidence 1 10111222 24446679999999888866544322 112445433 244444444443310000 11
Q ss_pred cccccCCCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhccCeeeEEEcCCCC--CCC-
Q 005798 541 SKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR--FCD- 617 (676)
Q Consensus 541 ~~~~pv~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~- 617 (676)
..+. ++.+.- -.|+-++|+|||++++|..-- --..|.++|.... +.+=-.+|.|++-..+. ..+
T Consensus 296 --------~~i~-~~sl~~-g~iivv~~l~ea~~~~N~~AP-EHLei~~~~~~~~--l~~i~nAGaiFlG~~sp~a~GDY 362 (431)
T PLN02926 296 --------GEIA-SKALGH-SFIVVARDMAEAISFSNLYAP-EHLIVNVEDAESW--LDKIDNAGSVFLGRWTPESVGDY 362 (431)
T ss_pred --------HHHH-HHHHHC-CEEEEECCHHHHHHHHHhhCh-HhheehhcCHHHH--HhhcCccceeccCCCCchhhhcc
Confidence 0111 222233 457889999999999998752 2346888998543 22335789999965442 111
Q ss_pred ----CCcccCcccccccccccccccccchhcceeEEEEE
Q 005798 618 ----GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 652 (676)
Q Consensus 618 ----~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 652 (676)
+.-++. +|.. +..|..+...|...-++.
T Consensus 363 ~aGpNHvLPT---~G~A----R~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 363 ASGTNHVLPT---YGYA----RMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred ccCcCcccCC---Ccce----eecCCCcHHHhcceeeEE
Confidence 100111 1111 234667788888766554
No 228
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=94.34 E-value=1.8 Score=47.09 Aligned_cols=249 Identities=14% Similarity=0.193 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcC----CChhhHHHHHHHHHHhCCE--EEEeCC
Q 005798 324 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFE----SRPDALVQIASLAIRSGNG--LLLKGG 397 (676)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p----~~P~~~~~~~~~ALaaGN~--vVlKps 397 (676)
-++.+++.++.+-+...+..... ...+|.....++.|+--|++..| .+|...++...||-.||+- |+.-|.
T Consensus 80 ai~~A~~~I~~fH~~Q~p~~~~~---~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp 156 (425)
T COG0141 80 ALEVAAENIEAFHEAQLPKDWLV---ETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPP 156 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCccce---eccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCC
Confidence 35556666666543222211111 11356677788999999999999 2677667777899999985 444555
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhhcCC----CCccEEEeecCHHHH--HHHHHh-cCCCE
Q 005798 398 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKLD----DVIDLVIPRGSNKLV--SQIKES-TKIPV 466 (676)
Q Consensus 398 ~~---tp~t~~~l~~l~~~al~~alP~gv~~~v~-~~~~~~~~l~~~----~~v~~v~fTGS~~~g--~~i~~~-a~~~~ 466 (676)
.. .|.+ +..++++ |+=.+.. |+...-.+|.-- |.||+|+=-|..-+. |+.... .++-
T Consensus 157 ~~~gv~p~i-L~AA~~~----------Gv~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g~V~ID- 224 (425)
T COG0141 157 PKDGVNPEI-LAAARLA----------GVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSGVVGID- 224 (425)
T ss_pred CCCCCCHHH-HHHHHHh----------CcHHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhCCcccC-
Confidence 54 4433 2223332 3333333 554433334322 679999877876542 332221 1111
Q ss_pred EeecCCcc-eEEEcCCCCHHHHHHHHHHhcCCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCcccccccc
Q 005798 467 LGHADGIC-HVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ 545 (676)
Q Consensus 467 ~lElGGk~-p~iV~~dADl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p 545 (676)
+..|=.. -+|-|++||.+..+..++.-+=.... ..-++|..| ++|.+++.+++.++--.+ ++.
T Consensus 225 -~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~----a~aiLvT~s---~~la~~v~~~v~~~l~~l---~~~----- 288 (425)
T COG0141 225 -MIAGPSEVLVIADETANPDFVAADLLSQAEHDPD----AQAILVTDS---EELAEAVEAAVERQLETL---PRA----- 288 (425)
T ss_pred -CCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCCC----ceEEEEeCc---HHHHHHHHHHHHHHHHhc---cHH-----
Confidence 1111122 24456679999998888765543322 123566543 356666655554321000 110
Q ss_pred CCCCCcccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhc-cCeeeEEEcCCCC
Q 005798 546 IPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTR 614 (676)
Q Consensus 546 v~~~~~~~e--E~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~-l~~G~v~iN~~~~ 614 (676)
++..+ +-|| .|+.++|+|||++++|..- +--.-|.++|... +..+ -++|.|++...+.
T Consensus 289 ----ei~~~~l~~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~~---~l~~I~nAGsIFlG~~sP 349 (425)
T COG0141 289 ----EIARKALENYG---AIILVDDLDEAVEISNEYA-PEHLELQTENPRE---LLGKIRNAGSIFLGHYSP 349 (425)
T ss_pred ----HHHHHHHHhCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHHH---HHHHhcccceeeecCCCC
Confidence 01100 1223 5778999999999999976 3345788999765 3443 4689999998653
No 229
>PRK13770 histidinol dehydrogenase; Provisional
Probab=93.53 E-value=14 Score=40.52 Aligned_cols=278 Identities=11% Similarity=0.096 Sum_probs=147.7
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCcEEEEEeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCEEE--EeCC
Q 005798 324 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLL--LKGG 397 (676)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~vV--lKps 397 (676)
-++.+.++++.|.....+.. +....+...-.++.|+--|++..|- +|...++.+.||-.||+.=| .-|.
T Consensus 76 ai~~A~~nI~~fh~~q~~~~-----~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 150 (416)
T PRK13770 76 ALQQSYERIKAYQESIKQTN-----QQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPP 150 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----eEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCc
Confidence 45556666666643222211 1112455566788999999999993 56666777889999998644 4454
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhh----cCCCCccEEEeecCHHH--HHHHHH-hcCCCE
Q 005798 398 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKE-STKIPV 466 (676)
Q Consensus 398 ~~---tp~t~~~l~~l~~~al~~alP~gv~~~v~-~~~~~~~~l----~~~~~v~~v~fTGS~~~--g~~i~~-~a~~~~ 466 (676)
.. .|.+- ..++++ |+=.+.. |+...-.+| .+=|+||+|+=-|..-| +|+... ..++-.
T Consensus 151 ~~~~i~p~iL-~Aa~~~----------Gv~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 219 (416)
T PRK13770 151 QPNGVSQEVL-AACYIT----------QVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQ 219 (416)
T ss_pred CCCCCCHHHH-HHHHHc----------CCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcCC
Confidence 32 34332 222332 4444554 554322222 23478999987776544 233211 112221
Q ss_pred EeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCccccccceEEEe--CccCChhHHHHHHHHHHhcCcEEecCccccccc
Q 005798 467 LGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVH--KDLACNGALNELVVELQHEGVGLFGGPRASKLL 544 (676)
Q Consensus 467 ~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g~C~a~~rv~V~--~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~ 544 (676)
+ .+..---+|-|++||.+..+..++.-+=.... ..-++|. +++. ++..+.+.+.++.+ ++.
T Consensus 220 ~-AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~----a~~iLvT~s~~la-~~V~~ev~~ql~~l-------pr~---- 282 (416)
T PRK13770 220 I-AGPTEIALIIDETADLDAIVYDVFAQAEHDEL----ARTYVISEDAQVL-KDLESRIAKALPNV-------DRY---- 282 (416)
T ss_pred C-CCCceeEEEecCCCCHHHHHHHHHHHhccCCC----CcEEEEeCCHHHH-HHHHHHHHHHHHhC-------ChH----
Confidence 1 11122234556779999988888765543322 1123443 2333 34333333333332 110
Q ss_pred cCCCCCcccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHhc-cCeeeEEEcCCCCC--CC--
Q 005798 545 QIPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--CD-- 617 (676)
Q Consensus 545 pv~~~~~~~e--E~FGPVl~i~~~~~~deAi~~aN~~~~GL~a~vft~d~~~a~~~~~~-l~~G~v~iN~~~~~--~~-- 617 (676)
.+.++ |-|| .|+-++|+|||++++|..--= -.-|.++|... +..+ -.+|.|++-..+.. .+
T Consensus 283 -----~i~~~al~~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY~ 350 (416)
T PRK13770 283 -----DIVSKSIANQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQP---YIEKVKYVGALFIGHYSPEVIGDYV 350 (416)
T ss_pred -----HHHHHHHHhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHH---HHhhCCEeceeccCCCCchhhhccc
Confidence 01111 1133 356789999999999997533 34688899854 4444 46899999755431 11
Q ss_pred ---CCcccCcccccccccccccccccchhcceeEEEEEE
Q 005798 618 ---GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 653 (676)
Q Consensus 618 ---~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 653 (676)
+.-++. +|.. +..|..+...|...-++..
T Consensus 351 aGpNHvLPT---~G~A----R~~sgLsv~~FlK~~s~~~ 382 (416)
T PRK13770 351 AGPSHVLPT---NRTA----RFTNGLSVNDFLTRNTVIH 382 (416)
T ss_pred cCCCCcCCC---Ccce----eccCCCcHHHeecceeeEE
Confidence 111111 1211 2346677888887766543
No 230
>PRK13769 histidinol dehydrogenase; Provisional
Probab=93.49 E-value=13 Score=40.10 Aligned_cols=213 Identities=14% Similarity=0.047 Sum_probs=121.5
Q ss_pred CCcEEEEEeeceeEEEEEcCC-ChhhHHHHHHHHHHhCCEEEE--eCCc-chHHHHHHHHHHHHHhcccccCcCceEEec
Q 005798 353 DGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLL--KGGK-EAMRSNAILHKVITSAIPDTVGEKLIGLVT 428 (676)
Q Consensus 353 ~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vVl--Kps~-~tp~t~~~l~~l~~~al~~alP~gv~~~v~ 428 (676)
+|...-.++.|+--|++..|. +|...++.+.||-.||+.=|+ -|.. -.|.+ +..++++ |+=.+..
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~i~p~v-L~aa~~~----------Gv~eIy~ 151 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRGVTGEL-LAVAKEL----------GVKGVLA 151 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCCCCHHH-HHHHHHc----------CCCeeec
Confidence 566667789999999999995 566667778899999986444 4442 23332 1222222 4555555
Q ss_pred -CCChhhhhhcCCCCccEEEeecCHHH--HHHHHH-hcCCCEEeecCCcceEEEcCCCCHHHHHHHHHHhcCCCCccccc
Q 005798 429 -SREEIPDLLKLDDVIDLVIPRGSNKL--VSQIKE-STKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNA 504 (676)
Q Consensus 429 -~~~~~~~~l~~~~~v~~v~fTGS~~~--g~~i~~-~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~~~n~g~C~a 504 (676)
|+...-.++..--+||+|+=-|..-+ +|+... ..++-.. -|=..-+|+-++||.+..+..++.-+=....
T Consensus 152 vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID~~--AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~---- 225 (368)
T PRK13769 152 IGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGIDGI--EGPTELVVYAEGVPPEVAVRGALAQLEHGPT---- 225 (368)
T ss_pred ccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCCCc--CCCcceEEEcCCCCHHHHHHHHHHHhhcCCC----
Confidence 55433334443347999988887654 333211 1122211 1222335666669999988887765433221
Q ss_pred cceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccccCCCCCcccccccCceEEEEEeCCHHHHHHHHHccCCCce
Q 005798 505 METLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHT 584 (676)
Q Consensus 505 ~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~GL~ 584 (676)
..-++|..+ .++.+++.+++++.-. + ..|- ..|+-++|+|||++++|..--= -
T Consensus 226 a~~iLvT~s---~~la~~V~~~v~~~~~---------------------~-~~~~-~~iivv~~leeai~~~N~~APE-H 278 (368)
T PRK13769 226 SFAYLLSTD---AELLKAAEEIYRRERT---------------------S-SMGP-LEVRKVAGVEEAVRFIDEIAPE-H 278 (368)
T ss_pred CcEEEEECC---HHHHHHHHHHHHHHHH---------------------h-cCCC-CeEEEECCHHHHHHHHHhhChH-h
Confidence 112444433 3566666666554200 0 1221 3467899999999999986522 2
Q ss_pred eEEEecCHHHHHHHHhccCeeeEEEcCCC
Q 005798 585 DCIVAEDQKVAETFLCQVDSAAVFHNAST 613 (676)
Q Consensus 585 a~vft~d~~~a~~~~~~l~~G~v~iN~~~ 613 (676)
..|.+.+ . .+.+=-.+|.|+++.+.
T Consensus 279 Lel~~~~-~---~~~~i~nAGsiFl~~p~ 303 (368)
T PRK13769 279 LEVWGRR-E---VAYRVRNVGAVSVNMPS 303 (368)
T ss_pred eEeeCcH-H---HHhhCCccCChhcCCch
Confidence 3445522 2 22234578999996643
No 231
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=93.08 E-value=16 Score=40.11 Aligned_cols=255 Identities=14% Similarity=0.114 Sum_probs=137.9
Q ss_pred CCcEEEEEeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCE--EEEeCCcc---hHHHHHHHHHHHHHhcccccCcCc
Q 005798 353 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGKE---AMRSNAILHKVITSAIPDTVGEKL 423 (676)
Q Consensus 353 ~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps~~---tp~t~~~l~~l~~~al~~alP~gv 423 (676)
+|...-.++.|+--|++..|- +|...++.+.||-.||+. |+.-|... .|.+- ..++++ |+
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL-~Aa~~~----------Gv 173 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIV-AAMHLA----------GA 173 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHH-HHHHHc----------CC
Confidence 456667789999999999993 566667778899999985 44445432 34331 122222 44
Q ss_pred eEEec-CCChhhhhh----cCCCCccEEEeecCHHH--HHHHHH-hcCCCEEeecCCcceEEEcCCCCHHHHHHHHHHhc
Q 005798 424 IGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKE-STKIPVLGHADGICHVYVDKSANLDVAKNIVIDAK 495 (676)
Q Consensus 424 ~~~v~-~~~~~~~~l----~~~~~v~~v~fTGS~~~--g~~i~~-~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~ 495 (676)
=.+.. |+...-.+| .+=|+||+|+=-|..-+ +|+... ..++-.+ .+..---+|-|++||.+..+..++.-+
T Consensus 174 ~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~-AGPSEvlViAD~~Anp~~vAaDLLaQA 252 (426)
T PRK12447 174 DEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDLF-AGPTETLVIADDTADPELVATDLLGQA 252 (426)
T ss_pred CeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCCC-CCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 44554 554322222 23478999988887654 233211 1122211 111112244566799999888887665
Q ss_pred CCCCccccccceEEEeCccCChhHHHHHHHHHHhcCcEEecCccccccccCCCCCcccc--cccCceEEEEEeCCHHHHH
Q 005798 496 IDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHH--EYNSMVCTVEIVDDVRAAI 573 (676)
Q Consensus 496 ~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~e--E~FGPVl~i~~~~~~deAi 573 (676)
=.... ..-++|..+ .++.+++.++++++-..+ ++. .+.++ +-+| .|+-++|+|||+
T Consensus 253 EHd~~----a~~iLvT~s---~~la~~V~~~v~~ql~~l---~r~---------~i~~~sl~~~g---~ii~v~~l~ea~ 310 (426)
T PRK12447 253 EHGPN----SPAVLITTS---RKLAEEVLAEIERLLAIL---PTA---------DVASAAWRDYG---EVILCDDLEEMV 310 (426)
T ss_pred ccCCC----CceEEEECC---HHHHHHHHHHHHHHHHhC---CHH---------HHHHHHHHhCC---EEEEECCHHHHH
Confidence 44332 112444332 244444444443310000 110 01111 1133 357789999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHhc-cCeeeEEEcCCCC--CC-----CCCcccCcccccccccccccccccchhcc
Q 005798 574 DHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTR--FC-----DGARFGLGAEVGISTSRIHARGPVGVEGL 645 (676)
Q Consensus 574 ~~aN~~~~GL~a~vft~d~~~a~~~~~~-l~~G~v~iN~~~~--~~-----~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 645 (676)
+++|..--= -..|.++|... +..+ -.+|.|++-..+. .. ++.-++. +|.. +..|..+.+.|
T Consensus 311 ~~~N~~APE-HLel~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT---~G~A----r~~sgLsv~~F 379 (426)
T PRK12447 311 AEADRYASE-HVQVMTEDPDW---FLENMTNYGALFLGERTNVAYGDKVIGTNHVLPT---SGAA----RYTGGLWVGKF 379 (426)
T ss_pred HHHHhhChH-heeehhCCHHH---HHhhcCccceeccCCCCchhhhhcccCCCcccCC---Ccce----eecCCCcHHHh
Confidence 999997533 34688888744 4443 5689999965442 11 1111111 1221 23466778888
Q ss_pred eeEEEEE
Q 005798 646 LTTRWIL 652 (676)
Q Consensus 646 t~~k~v~ 652 (676)
...-++.
T Consensus 380 lK~~s~~ 386 (426)
T PRK12447 380 LKTVTYQ 386 (426)
T ss_pred ccceeEE
Confidence 7766543
No 232
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=80.09 E-value=4.2 Score=51.21 Aligned_cols=92 Identities=13% Similarity=0.103 Sum_probs=61.3
Q ss_pred CcEEEEEeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCChh
Q 005798 354 GLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 433 (676)
Q Consensus 354 ~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al~~alP~gv~~~v~~~~~~ 433 (676)
|......-.|.|+|+++.+.-. -....++.+|++||.||+..++..+ +++. .||+.|.+.+.-. .
T Consensus 1178 GE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~~~-------~~~~-----~Lp~~v~~~v~~~--~ 1242 (1318)
T PRK11809 1178 GERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDALHR-------ALVA-----ALPAAVQARIQLA--K 1242 (1318)
T ss_pred CCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCchhH-------HHHH-----hccHHHHhHhhhc--c
Confidence 3344456789999999987544 2456677899999999987555322 2222 2899998877411 1
Q ss_pred hhhhcCCCCccEEEeecCHHHHHHHHHh
Q 005798 434 PDLLKLDDVIDLVIPRGSNKLVSQIKES 461 (676)
Q Consensus 434 ~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 461 (676)
...+ ....++.|.|-|....-+.+.++
T Consensus 1243 ~~~~-~~~~~~avl~~G~~~~l~~~~~~ 1269 (1318)
T PRK11809 1243 DWQL-ADQPFDAVLFHGDSDQLRALCEQ 1269 (1318)
T ss_pred cccc-ccCCccEEEEeCCHHHHHHHHHH
Confidence 1222 23469999999999877766544
No 233
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=71.16 E-value=16 Score=34.53 Aligned_cols=57 Identities=30% Similarity=0.324 Sum_probs=35.6
Q ss_pred eccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHH
Q 005798 155 LLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIK 230 (676)
Q Consensus 155 ~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~ 230 (676)
+.+|||||+++ ++++=.-.-+|++. + ....|+.-| ...+.|+++-|+.|++...+..
T Consensus 11 li~DVDGvLTD------G~ly~~~~Gee~Ka---F-----nv~DG~Gik-----~l~~~Gi~vAIITGr~s~ive~ 67 (170)
T COG1778 11 LILDVDGVLTD------GKLYYDENGEEIKA---F-----NVRDGHGIK-----LLLKSGIKVAIITGRDSPIVEK 67 (170)
T ss_pred EEEeccceeec------CeEEEcCCCceeee---e-----eccCcHHHH-----HHHHcCCeEEEEeCCCCHHHHH
Confidence 45799999997 54443222233331 2 335565444 5667899999999988765543
No 234
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=54.13 E-value=34 Score=35.15 Aligned_cols=102 Identities=24% Similarity=0.278 Sum_probs=56.5
Q ss_pred ecchhHHHHHH-HHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHH-HHh-cCCCCcccccch------HHHH
Q 005798 134 FWDNDSLAGLL-ALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQA-EIT-FGDKSRVGRGGM------TAKV 204 (676)
Q Consensus 134 ~~~~D~~A~~l-A~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~-~~~-~g~~~~~~~ggM------~~K~ 204 (676)
+++++....+- =+.|+|+ +-+++||.-=... .+..-+.+|..+ .+. ..+..-.++|.+ ..|+
T Consensus 122 ~~~~~a~e~~r~R~~l~a~-v~ilaDV~~kh~~--------~l~~~~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l 192 (254)
T PF03437_consen 122 IIEGCAGELLRYRKRLGAD-VKILADVHVKHSS--------PLATRDLEEAAKDAVERGGADAVIVTGKATGEPPDPEKL 192 (254)
T ss_pred cccccHHHHHHHHHHcCCC-eEEEeeechhhcc--------cCCCCCHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHH
Confidence 45555443333 3567888 8888887643322 222223333322 111 111111223321 3455
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHH---hCCceeeEEecCCc
Q 005798 205 NAAYCAACAGIPVVITSGFAMDSIIKVL---EGKRVGTLFHRDAH 246 (676)
Q Consensus 205 ~aa~~a~~~gv~v~I~~g~~~~~i~~~~---tg~~iGT~i~~~~~ 246 (676)
+.++.+.. +||+|-+|-+++++.+.+ +|-.+||++..+..
T Consensus 193 ~~vr~~~~--~PVlvGSGvt~~Ni~~~l~~ADG~IVGS~~K~~G~ 235 (254)
T PF03437_consen 193 KRVREAVP--VPVLVGSGVTPENIAEYLSYADGAIVGSYFKKDGK 235 (254)
T ss_pred HHHHhcCC--CCEEEecCCCHHHHHHHHHhCCEEEEeeeeeeCCE
Confidence 55555554 899999999999996654 56778999886633
No 235
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=46.80 E-value=51 Score=31.64 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=34.2
Q ss_pred eccccCccccCCC--CCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Q 005798 155 LLSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVL 232 (676)
Q Consensus 155 ~lTdVdGVy~~dP--~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~ 232 (676)
+.+|+|||+++.- -++++...+..+ ...|| +...+.+.|+++.|++++....+...+
T Consensus 10 ~v~d~dGv~tdg~~~~~~~g~~~~~~~----------------~~D~~-----~~~~L~~~Gi~laIiT~k~~~~~~~~l 68 (169)
T TIGR02726 10 VILDVDGVMTDGRIVINDEGIESRNFD----------------IKDGM-----GVIVLQLCGIDVAIITSKKSGAVRHRA 68 (169)
T ss_pred EEEeCceeeECCeEEEcCCCcEEEEEe----------------cchHH-----HHHHHHHCCCEEEEEECCCcHHHHHHH
Confidence 5679999999742 133333222222 23333 444566789998888877665554444
Q ss_pred hC
Q 005798 233 EG 234 (676)
Q Consensus 233 tg 234 (676)
..
T Consensus 69 ~~ 70 (169)
T TIGR02726 69 EE 70 (169)
T ss_pred HH
Confidence 43
No 236
>COG1634 Uncharacterized Rossmann fold enzyme [General function prediction only]
Probab=46.65 E-value=94 Score=31.21 Aligned_cols=24 Identities=33% Similarity=0.369 Sum_probs=19.8
Q ss_pred eecchhHHHHHHHHHcCCCeEeecc
Q 005798 133 IFWDNDSLAGLLALELKADLLVLLS 157 (676)
Q Consensus 133 ~~~~~D~~A~~lA~~l~Ad~li~lT 157 (676)
.|-|+|.+ +.+|..|+|+++++..
T Consensus 156 GFTDGDRA-a~LA~~lgA~~I~l~G 179 (232)
T COG1634 156 GFTDGDRA-AFLAYYLGAEKIRLVG 179 (232)
T ss_pred CCCCchHH-HHHHHHhCCCeEEEee
Confidence 36889985 5689999999998875
No 237
>COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
Probab=37.06 E-value=4.8e+02 Score=27.35 Aligned_cols=61 Identities=21% Similarity=0.219 Sum_probs=37.4
Q ss_pred HHHHHHHhC--CCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccc-cCccccC
Q 005798 100 DTVQSLLDL--RVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSG 165 (676)
Q Consensus 100 ~~i~~ll~~--g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTd-VdGVy~~ 165 (676)
+-+++.|.. |..-|+.-|+.+... -+|+-.+|.|++|+.+=+..+-|--||+++ -.-|+-+
T Consensus 26 ~Gld~Ilra~tGaLIvlG~de~v~~i-----~DGGF~ld~~fsa~~lyEL~KMDGAIILs~D~~kI~yA 89 (349)
T COG1623 26 DGLDNILRANTGALIVLGDDENVEKI-----CDGGFSLDVDFSATRLYELAKMDGAIILSDDGSKILYA 89 (349)
T ss_pred HHHHHHHhccCCeEEEEecchhhHhh-----hcCcEEEeccCCHHHHHHHHhcCCcEEEcCccceeeee
Confidence 344444444 345555443433321 033334999999999999999998888874 3445554
No 238
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=36.91 E-value=49 Score=26.00 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 005798 251 QVGAREMAVAARESSRRLQALQSQDRRKILLDVAD 285 (676)
Q Consensus 251 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 285 (676)
++++..+++.-..|...|..++...|..++..+..
T Consensus 7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~~ 41 (63)
T PF13376_consen 7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWINS 41 (63)
T ss_pred CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 45899999988999999999999999999877753
No 239
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=35.25 E-value=93 Score=24.01 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHH
Q 005798 259 VAARESSRRLQALQSQDRRKILLDVADALEANESL 293 (676)
Q Consensus 259 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 293 (676)
+.++..-..|+.+|.++|..+..+.....++...+
T Consensus 30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e 64 (66)
T cd01390 30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKE 64 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 44566677899999999999988887776665544
No 240
>COG5470 Uncharacterized conserved protein [Function unknown]
Probab=34.49 E-value=77 Score=27.27 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHhcCcEEe--cCccccccccCCCCCcccccccCceEEEEEeCCHHHHHHHHHccCCC
Q 005798 517 NGALNELVVELQHEGVGLF--GGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSA 582 (676)
Q Consensus 517 ~~f~~~l~~~~~~~~~~~~--g~~~~~~~~pv~~~~~~~eE~FGPVl~i~~~~~~deAi~~aN~~~~G 582 (676)
.+++.+....+++.|.+++ ||.-. .+.-+.+---+.|+.|+|.+.|.+.-|+.+|-
T Consensus 19 ~~Y~~~~~~a~~~~Ggr~LvRGG~v~----------~lEG~w~ptr~vviEFps~~~ar~~y~SpeYq 76 (96)
T COG5470 19 KDYVSKAKPAIEKFGGRYLVRGGEVE----------TLEGEWRPTRNVVIEFPSLEAARDCYNSPEYQ 76 (96)
T ss_pred HHHHHHhHHHHHHhCCeeEeeCCCee----------eccCCCCcccEEEEEcCCHHHHHHHhcCHHHH
Confidence 4666666777788887654 44311 11112221245689999999999999988875
No 241
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=34.23 E-value=43 Score=25.25 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.5
Q ss_pred HHhcCCHHHHHHHHHHHHHHH
Q 005798 267 RLQALQSQDRRKILLDVADAL 287 (676)
Q Consensus 267 ~w~~~~~~~R~~~L~~~a~~l 287 (676)
.|..++.++|.+++.++...+
T Consensus 29 ~W~~~s~~er~~i~~~l~~R~ 49 (51)
T PF06945_consen 29 DWKSMSDDERRAILARLRARR 49 (51)
T ss_pred HHhhCCHHHHHHHHHHHHHHh
Confidence 499999999999999887654
No 242
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=32.81 E-value=1.2e+02 Score=24.39 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHH
Q 005798 259 VAARESSRRLQALQSQDRRKILLDVADALEANESL 293 (676)
Q Consensus 259 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 293 (676)
+..+.+-..|+.+|.++|..+-.+....=++...+
T Consensus 34 e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~e 68 (73)
T PF09011_consen 34 EVMKEISERWKSLSEEEKEPYEERAKEDKERYERE 68 (73)
T ss_dssp HHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778899999999999987776554444433
No 243
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=30.44 E-value=1.2e+02 Score=23.69 Aligned_cols=36 Identities=8% Similarity=0.114 Sum_probs=27.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHH
Q 005798 260 AARESSRRLQALQSQDRRKILLDVADALEANESLIK 295 (676)
Q Consensus 260 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 295 (676)
..+.+-..|..+|.++|..+-.......+++..++.
T Consensus 31 i~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~~ 66 (69)
T PF00505_consen 31 ISKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEMP 66 (69)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666789999999999998888777776665543
No 244
>smart00398 HMG high mobility group.
Probab=28.00 E-value=1.6e+02 Score=22.71 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHH
Q 005798 260 AARESSRRLQALQSQDRRKILLDVADALEANESLI 294 (676)
Q Consensus 260 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 294 (676)
.++..-..|+.+|.++|..+........+++..++
T Consensus 32 i~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~ 66 (70)
T smart00398 32 ISKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEM 66 (70)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556678999999999999888777766665554
No 245
>COG2044 Predicted peroxiredoxins [General function prediction only]
Probab=25.84 E-value=1.1e+02 Score=27.55 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCc
Q 005798 137 NDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP 216 (676)
Q Consensus 137 ~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~ 216 (676)
+=..-+..|.+++.|..+|+| -||++--. ...++.|+...+..+. +-...|+++||+
T Consensus 21 a~f~~A~~a~smg~dV~iF~t-~dG~~l~~--K~~~ekik~~~~~~l~--------------------~~~~~a~e~GVk 77 (120)
T COG2044 21 APFVMATAAASMGYDVTIFFT-MDGVTLVK--KKVAEKIKHPNFPPLE--------------------ELIKQAIEAGVK 77 (120)
T ss_pred hHHHHHHHHHhCCCceEEEEE-eccceeee--ecchhhhcCCCCCCHH--------------------HHHHHHHHcCCE
Confidence 334556779999999999998 56655221 0123344433332222 234478889999
Q ss_pred EEEEe
Q 005798 217 VVITS 221 (676)
Q Consensus 217 v~I~~ 221 (676)
.++|.
T Consensus 78 ~yvCe 82 (120)
T COG2044 78 IYVCE 82 (120)
T ss_pred EEEEc
Confidence 99986
No 246
>PF03740 PdxJ: Pyridoxal phosphate biosynthesis protein PdxJ; InterPro: IPR004569 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. In Escherichia coli, the pdx genes involved in vitamin B6 have been characterised [, , ]. This entry represents PdxJ, which catalyses the condensation of 1-amino-3-oxo-4-(phosphohydroxy)propan-2-one and 1-deoxy-D-xylulose-5-phosphate to form pyridoxine-5'-phosphate. The product of the PdxJ reaction is then oxidized by PdxH to pyridoxal 5'-phosphate.; GO: 0008615 pyridoxine biosynthetic process, 0005737 cytoplasm; PDB: 3F4N_B 3O6D_A 3O6C_A 1M5W_G 1IXQ_D 1IXP_B 1IXN_A 1HO4_C 1HO1_A 1IXO_D ....
Probab=23.75 E-value=4.9e+02 Score=26.50 Aligned_cols=99 Identities=23% Similarity=0.224 Sum_probs=60.3
Q ss_pred hHHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceec
Q 005798 97 QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIH 176 (676)
Q Consensus 97 ~~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~ 176 (676)
...+.+..|-+.|+ .| + -|+|.|.-....|..++||.+.+.| |-|-+ +..
T Consensus 112 ~l~~~i~~L~~~gI-rv-------S-----------LFiDP~~~qi~~A~~~Gad~VELhT---G~yA~------a~~-- 161 (239)
T PF03740_consen 112 RLKPVIKRLKDAGI-RV-------S-----------LFIDPDPEQIEAAKELGADRVELHT---GPYAN------AFD-- 161 (239)
T ss_dssp HHHHHHHHHHHTT--EE-------E-----------EEE-S-HHHHHHHHHTT-SEEEEET---HHHHH------HSS--
T ss_pred HHHHHHHHHHhCCC-EE-------E-----------EEeCCCHHHHHHHHHcCCCEEEEeh---hHhhh------hcC--
Confidence 34678888877774 32 1 2688999999999999999999999 66643 110
Q ss_pred eeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHhCCceee
Q 005798 177 TYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 239 (676)
Q Consensus 177 ~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~tg~~iGT 239 (676)
..++..+.+. ..-..+|..|.+.|+.|.-.-|-+.+++..+..-..+..
T Consensus 162 --~~~~~~~ell------------~~l~~aa~~a~~lGL~VnAGHgL~y~N~~~i~~i~~i~E 210 (239)
T PF03740_consen 162 --DAEEAEEELL------------ERLRDAARYAHELGLGVNAGHGLNYDNVRPIAAIPPIEE 210 (239)
T ss_dssp --HHHHHHHHHH------------HHHHHHHHHHHHTT-EEEEETT--TTTHHHHHTSTTEEE
T ss_pred --CHHHHHHHHH------------HHHHHHHHHHHHcCCEEecCCCCCHHHHHHHHhCCCceE
Confidence 1111221110 123357788999999999988888888877665444443
No 247
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=23.59 E-value=1.9e+02 Score=23.07 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHH
Q 005798 259 VAARESSRRLQALQSQDRRKILLDVADALEANES 292 (676)
Q Consensus 259 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 292 (676)
+.++..-..|+.+|.++|..+........+++..
T Consensus 31 eisk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~ 64 (72)
T cd01388 31 AISKILGDRWKALSNEEKQPYYEEAKKLKELHMK 64 (72)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456667789999999999887776666655544
No 248
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=23.30 E-value=6e+02 Score=25.87 Aligned_cols=70 Identities=26% Similarity=0.241 Sum_probs=49.5
Q ss_pred ecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceeceeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHc
Q 005798 134 FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 213 (676)
Q Consensus 134 ~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~ 213 (676)
|+|-|.-....|+.++||.+.+.| |-|-+ + .......|+. .-..+|..|.+.
T Consensus 132 FidP~~~qi~~A~~~GAd~VELhT---G~yA~------a--~~~~~~~el~-----------------~~~~aa~~a~~l 183 (239)
T PRK05265 132 FIDPDPEQIEAAAEVGADRIELHT---GPYAD------A--KTEAEAAELE-----------------RIAKAAKLAASL 183 (239)
T ss_pred EeCCCHHHHHHHHHhCcCEEEEec---hhhhc------C--CCcchHHHHH-----------------HHHHHHHHHHHc
Confidence 688899999999999999999999 66754 1 0111112221 223577888999
Q ss_pred CCcEEEEeCCCcchHHHH
Q 005798 214 GIPVVITSGFAMDSIIKV 231 (676)
Q Consensus 214 gv~v~I~~g~~~~~i~~~ 231 (676)
|+.|.-.-|-+.+++..+
T Consensus 184 GL~VnAGHgLny~Nv~~i 201 (239)
T PRK05265 184 GLGVNAGHGLNYHNVKPI 201 (239)
T ss_pred CCEEecCCCCCHHhHHHH
Confidence 999988777777777554
No 249
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=22.41 E-value=1.8e+02 Score=29.60 Aligned_cols=47 Identities=28% Similarity=0.448 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHc-CCcEEEEeCCCcchHH---HHHhCCceeeEEecCCccc
Q 005798 202 AKVNAAYCAACA-GIPVVITSGFAMDSII---KVLEGKRVGTLFHRDAHLW 248 (676)
Q Consensus 202 ~K~~aa~~a~~~-gv~v~I~~g~~~~~i~---~~~tg~~iGT~i~~~~~~~ 248 (676)
+.++..+.+.+. .+||.+-||-+++++. ++.+|-.+||++......|
T Consensus 192 ~d~~el~~a~~~~~~pvlvGSGv~~eN~~~~l~~adG~IvgT~lK~~G~~~ 242 (263)
T COG0434 192 PDLEELKLAKEAVDTPVLVGSGVNPENIEELLKIADGVIVGTSLKKGGVTW 242 (263)
T ss_pred CCHHHHHHHHhccCCCEEEecCCCHHHHHHHHHHcCceEEEEEEccCCEec
Confidence 344444444432 4899999999998874 4456778899998876655
No 250
>TIGR00620 sporelyase spore photoproduct lyase. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=21.49 E-value=1.6e+02 Score=29.07 Aligned_cols=60 Identities=20% Similarity=0.211 Sum_probs=42.1
Q ss_pred eEeecc---ccCccccCCCCCCCCceec--eeehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEE
Q 005798 152 LLVLLS---DVEGLYSGPPSEPNSKLIH--TYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVIT 220 (676)
Q Consensus 152 ~li~lT---dVdGVy~~dP~~~~a~~i~--~i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~ 220 (676)
++-|.| ||+++.+-+| +++.+- +|+.+++.+... .+|..+..-++||..+++.|-+|.++
T Consensus 26 ~lef~TK~~nv~~Ll~l~~---~~~t~~rfSlnp~~Ii~~~E------~~T~sl~~Rl~Aa~k~a~aGy~Vg~~ 90 (199)
T TIGR00620 26 KLRFVTKFHHVDHLLDAKH---NGKTRFRFSINADYVIKNFE------PGTSPLDKRIEAAVKVAKAGYPLGFI 90 (199)
T ss_pred EEEEEEcccchhhHhcCCC---CCCEEEEEEeCHHHHHHHhc------CCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 455554 8888888765 333333 467777776554 34677788999999999999886654
No 251
>cd00003 PNPsynthase Pyridoxine 5'-phosphate (PNP) synthase domain; pyridoxal 5'-phosphate is the active form of vitamin B6 that acts as an essential, ubiquitous coenzyme in amino acid metabolism. In bacteria, formation of pyridoxine 5'-phosphate is a step in the biosynthesis of vitamin B6. PNP synthase, a homooctameric enzyme, catalyzes the final step in PNP biosynthesis, the condensation of 1-amino-acetone 3-phosphate and 1-deoxy-D-xylulose 5-phosphate. PNP synthase adopts a TIM barrel topology, intersubunit contacts are mediated by three ''extra'' helices, generating a tetramer of symmetric dimers with shared active sites; the open state has been proposed to accept substrates and to release products, while most of the catalytic events are likely to occur in the closed state; a hydrophilic channel running through the center of the barrel was identified as the essential structural feature that enables PNP synthase to release water molecules produced during the reaction from the closed,
Probab=21.02 E-value=7.2e+02 Score=25.22 Aligned_cols=89 Identities=26% Similarity=0.299 Sum_probs=60.2
Q ss_pred HHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceece
Q 005798 98 LYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHT 177 (676)
Q Consensus 98 ~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~ 177 (676)
..+.+..|-+.|+ .| + -|+|.|.-....|..+|||.+.+.| |=|-+ +.
T Consensus 112 l~~~i~~l~~~gI-~V-------S-----------LFiDPd~~qi~~A~~~GAd~VELhT---G~Ya~------a~---- 159 (234)
T cd00003 112 LKPIIERLKDAGI-RV-------S-----------LFIDPDPEQIEAAKEVGADRVELHT---GPYAN------AY---- 159 (234)
T ss_pred HHHHHHHHHHCCC-EE-------E-----------EEeCCCHHHHHHHHHhCcCEEEEec---hhhhc------CC----
Confidence 3567777777775 32 1 2688999999999999999999999 66754 11
Q ss_pred eehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Q 005798 178 YIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVL 232 (676)
Q Consensus 178 i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~ 232 (676)
+..+..+++. .-..+|..|.+.|+.|.-.-|-+.+++..+.
T Consensus 160 -~~~~~~~el~-------------~i~~aa~~a~~~GL~VnAGHgLny~Nv~~i~ 200 (234)
T cd00003 160 -DKAEREAELE-------------RIAKAAKLARELGLGVNAGHGLNYENVKPIA 200 (234)
T ss_pred -CchhHHHHHH-------------HHHHHHHHHHHcCCEEecCCCCCHHHHHHHH
Confidence 0111111221 2245778889999999887777777775544
No 252
>TIGR00559 pdxJ pyridoxine 5'-phosphate synthase. PdxJ is required in the biosynthesis of pyridoxine (vitamin B6), a precursor to the enzyme cofactor pyridoxal phosphate. ECOCYC describes the predicted reaction equation as 1-amino-propan-2-one-3-phosphate + deoxyxylulose-5-phosphate = pyridoxine-5'-phosphate. The product of that reaction is oxidized by PdxH to pyridoxal 5'-phosphate.
Probab=20.84 E-value=9e+02 Score=24.62 Aligned_cols=90 Identities=22% Similarity=0.269 Sum_probs=60.1
Q ss_pred HHHHHHHHHhCCCeeEEcCCCceecCCCCCCCCCceecchhHHHHHHHHHcCCCeEeeccccCccccCCCCCCCCceece
Q 005798 98 LYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHT 177 (676)
Q Consensus 98 ~~~~i~~ll~~g~iPVi~~~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~l~Ad~li~lTdVdGVy~~dP~~~~a~~i~~ 177 (676)
..+.+..|-+.|+ .| + -|+|.|.-....|+.+|||.+.+.| |-|-+..
T Consensus 112 l~~~i~~l~~~gI-~V-------S-----------LFiDP~~~qi~~A~~~GAd~VELhT---G~YA~a~---------- 159 (237)
T TIGR00559 112 LCELVKRFHAAGI-EV-------S-----------LFIDADKDQISAAAEVGADRIEIHT---GPYANAY---------- 159 (237)
T ss_pred HHHHHHHHHHCCC-EE-------E-----------EEeCCCHHHHHHHHHhCcCEEEEec---hhhhcCC----------
Confidence 3567777766664 32 1 2688999999999999999999999 6675411
Q ss_pred eehhchHHHHhcCCCCcccccchHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHh
Q 005798 178 YIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 233 (676)
Q Consensus 178 i~~~e~~~~~~~g~~~~~~~ggM~~K~~aa~~a~~~gv~v~I~~g~~~~~i~~~~t 233 (676)
+..+..+++. .-..+|..|.+.|+.|.-.-|-+.+++..+..
T Consensus 160 -~~~~~~~el~-------------~i~~aa~~A~~lGL~VnAGHgLny~Nv~~i~~ 201 (237)
T TIGR00559 160 -NKKEMAEELQ-------------RIVKASVHAHSLGLKVNAGHGLNYHNVKYFAE 201 (237)
T ss_pred -CchhHHHHHH-------------HHHHHHHHHHHcCCEEecCCCCCHHhHHHHHh
Confidence 0011111121 22357788889999998777777777755543
No 253
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=20.46 E-value=2.8e+02 Score=20.99 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHH
Q 005798 259 VAARESSRRLQALQSQDRRKILLDVADALEANES 292 (676)
Q Consensus 259 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 292 (676)
+..+.....|+.+|.++|..+.........++..
T Consensus 30 ~i~~~~~~~W~~l~~~~k~~y~~~a~~~~~~y~~ 63 (66)
T cd00084 30 EISKILGEMWKSLSEEEKKKYEEKAEKDKERYEK 63 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456666789999999999988777666555443
Done!