Query 005800
Match_columns 676
No_of_seqs 317 out of 1333
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 07:44:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005800.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005800hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhm_A Phosphatidylinositol-4, 100.0 1E-117 4E-122 1051.9 49.4 567 10-676 349-939 (1091)
2 2y3a_A Phosphatidylinositol-4, 100.0 8E-117 3E-121 1051.3 45.4 557 9-676 346-942 (1092)
3 2wxf_A Phosphatidylinositol-4, 100.0 6E-116 2E-120 1035.9 50.3 550 9-676 210-790 (940)
4 1e7u_A Phosphatidylinositol 3- 100.0 1E-113 3E-118 1017.3 57.3 553 11-676 213-806 (961)
5 3ls8_A Phosphatidylinositol 3- 100.0 2E-105 6E-110 906.2 40.6 411 264-676 3-479 (614)
6 2x6h_A GH13170P, VPS34, phosph 100.0 3E-102 1E-106 892.4 39.7 425 250-676 2-553 (696)
7 3b7y_A E3 ubiquitin-protein li 96.6 0.015 5.2E-07 53.7 11.6 106 7-130 9-114 (153)
8 1rsy_A Synaptotagmin I; calciu 96.6 0.011 3.7E-07 54.8 10.4 75 52-130 62-136 (152)
9 3n5a_A Synaptotagmin-7; calciu 96.6 0.023 7.8E-07 51.2 12.2 76 52-129 36-111 (138)
10 3rdl_A Protein kinase C alpha 96.6 0.02 6.7E-07 51.7 11.7 76 52-130 36-111 (137)
11 1w15_A Synaptotagmin IV; metal 96.5 0.013 4.4E-07 54.3 10.2 76 52-129 50-125 (153)
12 2b3r_A Phosphatidylinositol-4- 96.4 0.016 5.5E-07 52.7 10.4 77 52-130 39-116 (134)
13 1tjx_A Similar to synaptotagmi 96.4 0.021 7.2E-07 53.2 11.4 76 52-129 45-120 (159)
14 1a25_A CALB, protein kinase C 96.4 0.024 8.2E-07 52.3 11.6 76 52-130 51-126 (149)
15 3f04_A Synaptotagmin-1; C2A, c 96.4 0.018 6.1E-07 52.6 10.2 75 52-130 54-128 (143)
16 1ugk_A Synaptotagmin IV, KIAA1 96.2 0.046 1.6E-06 49.5 12.1 86 52-145 43-129 (138)
17 1wfm_A Synaptotagmin XIII; C2 96.2 0.014 4.8E-07 53.3 8.3 76 52-130 43-118 (138)
18 2cm5_A Rabphilin-3A; protein t 96.1 0.035 1.2E-06 52.2 11.0 76 52-129 57-132 (166)
19 2chd_A Rabphilin-3A, exophilin 96.1 0.025 8.5E-07 51.5 9.7 76 52-129 49-125 (142)
20 3fbk_A RGS3, RGP3, regulator o 96.1 0.039 1.3E-06 51.2 11.1 75 52-129 46-121 (153)
21 2dmh_A Myoferlin; beta-sandwic 96.1 0.029 9.8E-07 50.9 10.0 72 52-129 26-97 (140)
22 2bwq_A Regulating synaptic mem 96.0 0.043 1.5E-06 48.9 10.7 76 52-129 38-116 (129)
23 3l4c_A Dedicator of cytokinesi 96.0 0.035 1.2E-06 55.5 10.8 66 80-146 87-157 (220)
24 3fdw_A Synaptotagmin-like prot 96.0 0.037 1.3E-06 50.9 10.4 77 52-130 44-120 (148)
25 2d8k_A Synaptotagmin VII; exoc 95.9 0.038 1.3E-06 50.3 10.1 75 52-130 46-121 (141)
26 2z0u_A WW domain-containing pr 95.9 0.017 5.9E-07 54.3 7.9 77 52-130 63-140 (155)
27 2enp_A B/K protein; C2 type 1, 95.8 0.025 8.6E-07 51.9 8.5 75 52-130 53-127 (147)
28 3m7f_B E3 ubiquitin-protein li 95.8 0.05 1.7E-06 51.6 10.7 75 52-130 28-102 (176)
29 2r83_A Synaptotagmin-1; C2A-C2 95.5 0.066 2.3E-06 54.4 11.1 76 52-129 170-245 (284)
30 1rh8_A Piccolo protein; beta-s 95.5 0.021 7.1E-07 52.0 6.4 77 52-129 38-123 (142)
31 2dmg_A KIAA1228 protein; beta- 95.5 0.059 2E-06 49.0 9.4 75 53-129 44-120 (142)
32 2q3x_A Regulating synaptic mem 95.4 0.037 1.3E-06 52.5 8.1 74 52-130 51-125 (171)
33 1gmi_A Protein kinase C, epsil 95.4 0.039 1.4E-06 50.0 7.9 68 52-129 37-104 (136)
34 2ep6_A MCTP2 protein; beta san 95.4 0.06 2E-06 48.4 9.1 69 52-130 33-101 (133)
35 1v27_A Regulating synaptic mem 95.4 0.054 1.8E-06 49.0 8.8 76 52-129 41-119 (141)
36 3kwu_A MUNC13-1; calcium bindi 95.0 0.18 6.1E-06 46.1 11.1 69 52-130 37-116 (148)
37 2fk9_A Protein kinase C, ETA t 94.8 0.071 2.4E-06 50.4 7.9 68 52-129 59-126 (157)
38 1djx_A PLC-D1, phosphoinositid 94.7 0.17 5.9E-06 58.0 12.6 85 51-143 518-603 (624)
39 2nq3_A Itchy homolog E3 ubiqui 94.7 0.072 2.4E-06 50.9 7.9 66 53-129 57-122 (173)
40 2r83_A Synaptotagmin-1; C2A-C2 94.6 0.2 6.8E-06 50.8 11.4 75 52-130 39-113 (284)
41 1dqv_A Synaptotagmin III; beta 94.5 0.04 1.4E-06 56.8 6.0 76 52-129 172-247 (296)
42 1rlw_A Phospholipase A2, CALB 94.5 0.089 3E-06 46.6 7.4 78 52-140 26-103 (126)
43 1wfj_A Putative elicitor-respo 94.4 0.072 2.4E-06 48.0 6.8 67 53-129 31-98 (136)
44 2cjt_A UNC-13 homolog A, MUNC1 94.2 0.15 5.2E-06 46.3 8.5 66 52-130 22-88 (131)
45 3pyc_A E3 ubiquitin-protein li 93.8 0.29 1E-05 43.7 9.6 84 52-144 25-111 (132)
46 1dqv_A Synaptotagmin III; beta 93.5 0.35 1.2E-05 49.7 10.8 74 52-129 40-114 (296)
47 2cjs_A UNC-13 homolog A, MUNC1 93.4 0.16 5.5E-06 48.3 7.3 66 52-130 31-97 (167)
48 2qzq_A Axin interactor, dorsal 91.0 0.98 3.3E-05 42.4 9.3 106 17-145 15-124 (152)
49 3qr0_A Phospholipase C-beta (P 91.0 0.95 3.2E-05 53.5 11.4 81 53-144 667-751 (816)
50 3ohm_B 1-phosphatidylinositol- 90.8 1.2 4.1E-05 53.1 12.1 81 53-144 742-825 (885)
51 2zkm_X 1-phosphatidylinositol- 90.4 1.2 4.2E-05 52.4 11.8 81 53-144 695-779 (799)
52 3nsj_A Perforin-1; pore formin 89.7 2 6.8E-05 48.4 12.3 84 52-143 413-500 (540)
53 3jzy_A Intersectin 2; C2 domai 89.5 1.5 5.1E-05 48.2 11.0 69 52-129 407-475 (510)
54 3l9b_A Otoferlin; C2-domain, b 89.1 1.8 6.2E-05 40.3 9.4 57 72-129 50-107 (144)
55 3pfq_A PKC-B, PKC-beta, protei 75.2 5.5 0.00019 45.7 8.2 75 52-129 192-266 (674)
56 1cjy_A CPLA2, protein (cytosol 73.0 3.4 0.00012 48.3 5.7 71 52-129 41-111 (749)
57 3bxj_A RAS GTPase-activating p 53.4 3.3 0.00011 45.8 0.6 67 54-129 28-101 (483)
58 3ltj_A Alpharep-4; protein eng 50.6 28 0.00096 32.2 6.6 74 322-400 74-148 (201)
59 3ltm_A Alpha-REP4; protein eng 45.9 22 0.00076 33.2 5.1 74 322-400 17-91 (211)
60 3ltm_A Alpha-REP4; protein eng 38.2 56 0.0019 30.4 6.6 74 322-400 79-153 (211)
61 3ltj_A Alpharep-4; protein eng 33.8 44 0.0015 30.8 5.0 75 323-402 44-119 (201)
62 2do9_A NALP10, nacht-, LRR- an 26.7 26 0.0009 31.1 1.9 76 289-391 17-92 (115)
63 3q8g_A CRAL-TRIO domain-contai 25.0 68 0.0023 33.1 5.0 45 301-349 32-83 (320)
64 3l9t_A Putative uncharacterize 23.3 3.4E+02 0.012 27.0 9.5 106 307-420 119-237 (240)
65 1te4_A Conserved protein MTH18 23.2 33 0.0011 29.9 1.9 49 347-400 35-83 (131)
66 2l6a_A Nacht, LRR and PYD doma 21.8 50 0.0017 28.6 2.7 69 302-389 20-88 (102)
No 1
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=100.00 E-value=1.1e-117 Score=1051.87 Aligned_cols=567 Identities=26% Similarity=0.405 Sum_probs=468.3
Q ss_pred eeCCCCCCeEEEEEeecCCCCCCCCCCCCCCCCCCCCCccCCCCceEEEEEEEeCCcccccceecccccCCCCcccccce
Q 005800 10 LSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPI 89 (676)
Q Consensus 10 ~s~dl~~~~~~ki~~leg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl 89 (676)
..-|++.+++|+|.+..+-.. +.....++||+|+|||||++||.|++|+++++++.. |||||
T Consensus 349 slw~~~~~f~v~i~~~~~~n~-----------------~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~-Wne~l 410 (1091)
T 3hhm_A 349 SLWVINSALRIKILCATYVNV-----------------NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPR-WNEWL 410 (1091)
T ss_dssp EGGGCCSEEEEEEEEESCCCC-----------------CCSSCCCCCEEEEEESSSCSSCCEECCCCCCTTSCE-EEEEE
T ss_pred chhhCCCCEEEEEEEecCCCC-----------------CccccceEEEEEEEEECCEEccCceeccccCCCCCC-CCeeE
Confidence 346889999999999877421 112347899999999999999999999999987655 99999
Q ss_pred EecccccCcCccCceEEEEEeecCC----CCceeEeEEEEEeecccccccccceeeEeecCCCCCCCCCCCCCCCCCCCc
Q 005800 90 TLSTKYRDLTAHSQLALTVWDVSCG----KDERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLPTSTPGKVPKNE 165 (676)
Q Consensus 90 ~fpi~~~dLP~~a~L~~ti~~~~~~----~~~~~vG~~~~~LFd~~~~Lr~G~~~l~lw~~~~~d~~~~~~~p~~~~~~~ 165 (676)
+|||+|+||||+|+||||||++..+ ++..++||+|++|||++|.|++|.+.|++||.. |+...
T Consensus 411 ~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW~~~--~~~~~----------- 477 (1091)
T 3hhm_A 411 NYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWPVP--HGLED----------- 477 (1091)
T ss_dssp EEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECEECC--TTCCC-----------
T ss_pred EecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEeecCC--cchhh-----------
Confidence 9999999999999999999998764 235799999999999999999999999999832 22110
Q ss_pred hhhHHHHHHHHhhhhcccccccchhhhhhHHHHHHHHHhhhccCCCCceEEEEEeCCCCceeEeecCCCCCCCCCCccCC
Q 005800 166 RGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFLLPAPITST 245 (676)
Q Consensus 166 ~~~~~rl~~l~~~~~~G~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~~vv~~~~~~~~~~~~~~~~~ 245 (676)
++ +..|.+.+++ ..+ ...+.|+|+.+++||+|++.+...
T Consensus 478 ---------~~--~p~g~~~~np--------------------~~~-~~~~~l~~~~~~~~v~fp~~~~~~--------- 516 (1091)
T 3hhm_A 478 ---------LL--NPIGVTGSNP--------------------NKE-TPCLELEFDWFSSVVKFPDMSVIE--------- 516 (1091)
T ss_dssp ---------SC--CTTSCCSCCS--------------------CSS-SCEEEEEECCCSSCEECCCHHHHH---------
T ss_pred ---------hc--CcccccCCCC--------------------CCC-CccEEEEEEcCCCCeEeCCcchhh---------
Confidence 01 1234444321 111 235566666677799998742100
Q ss_pred CcceeecCCCCCCCCchhHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCCHHHHHHHHHhHHHhhhchhh
Q 005800 246 NELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRA 325 (676)
Q Consensus 246 ~~~~~~~Dpe~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~~~a 325 (676)
.......|++.+..++ +++ . ++..+++.||+.+++++|++|+++||+++||++||++||+||+++.++|+|
T Consensus 517 ~~~~~~~~~e~~~~~~----~~~----l-~~~~~~~~k~~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~p~a 587 (1091)
T 3hhm_A 517 EHANWSVSREAGFSYS----HAG----L-SNRLARDNELRENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCVTIPEI 587 (1091)
T ss_dssp HHHHHHHHHHTTSCSC----CSS----S-CCC-------CCCGGGGGGTTSSSCTTSCCCHHHHHHHHHTHHHHTTSGGG
T ss_pred hhhhhccccccccccc----ccc----c-ccccccccccChHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhccChhH
Confidence 0000001223222222 000 0 256678899999999999999999999999999999999999999999999
Q ss_pred HhhhhccccCCCHHHHHHHHHHhcccCCCCHhhHhhccCCCCCCHHHHHHHHHHH-hcCChhHHHHHHHHHHHHHhcccC
Q 005800 326 LTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCIL-ERADDDELQCYLLQLVQALRFERS 404 (676)
Q Consensus 326 L~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~d~~VR~yAV~~L-~~~~d~eL~~yLlQLVQaLkyE~~ 404 (676)
|||||+||+|+++++++||++||..|++++|++||||||++|+|+.||+|||++| ++++||+|++||||||||||||++
T Consensus 588 L~k~L~sV~W~~~~e~~e~~~LL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~~ddeLl~YLlQLVQALKyE~~ 667 (1091)
T 3hhm_A 588 LPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYLTDDKLSQYLIQLVQVLKYEQY 667 (1091)
T ss_dssp HHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHTTSTTCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHGGGGCSS
T ss_pred HHHHheeCCCCCHHHHHHHHHHHhcCCCCCHHHHHHhCcccCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred cchHHHHHHHHHhhhchhhHHHHHHHHHHHccCcchhhhhHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHHHH
Q 005800 405 DKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQL 484 (676)
Q Consensus 405 ~~s~La~FLi~Ral~n~~ig~~lfW~L~~E~~~~~~~~r~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~i~~L 484 (676)
++|+||+|||+||++|++|||+|||||++|++++....|| ..++++++.. ++ +.++.+.+|++|+++|
T Consensus 668 ~ds~La~FLl~RAl~n~~igh~lfW~L~~E~~~~~~~~r~----~~lLe~~~~~----~~----~~~~~l~rQ~~~~~~L 735 (1091)
T 3hhm_A 668 LDNLLVRFLLKKALTNQRIGHFFFWHLKSEMHNKTVSQRF----GLLLESYCRA----CG----MYLKHLNRQVEAMEKL 735 (1091)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHTTTTCTTTHHHH----HHHHHHHHHH----SC----THHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhhCHHHHHHHHHHeeecccCchHHHHH----HHHHHHHHhh----CH----HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998876665 6677777752 22 3467899999999999
Q ss_pred HHHHHHhccCC-C-ChhHHHHHHHHHHHhhhhhcccCCCCcccCCCCceEEEEEecCcceeeccCCcceEEEEEecC--C
Q 005800 485 CSIMRDVGNVR-G-NTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTAS--G 560 (676)
Q Consensus 485 ~~i~~~vk~~~-~-~~~~k~e~L~~~L~~~~~~l~~~~~~~~lPldP~~~i~~i~~~~~~v~~S~~~Pl~l~f~~~d--g 560 (676)
.+|+..||..+ + ++.+|++.|++.|++... ... .+++++|+||++.|.+|.+++|+||+|+++|++|+|+++| |
T Consensus 736 ~~is~~ik~~~~~~~~~~k~~~L~~~L~~~~~-~~~-~~~~~lPl~P~~~I~~i~~~~~~V~~S~~~P~~L~f~g~D~~G 813 (1091)
T 3hhm_A 736 INLTDILKQEKKDETQKVQMKFLVEQMRRPDF-MDA-LQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIMS 813 (1091)
T ss_dssp HHHHHHTTSTTCCSCHHHHHHHHHHHHHSHHH-HHH-SSSEEETTEEEEEECSBCGGGCEECCSSSCCEEEEECCCSTTS
T ss_pred HHHHHHHhhhccccchHHHHHHHHHHHhccch-hhc-ccCCCCCCCcceEEEEEeeceEEEeecccCcEEEEEecCCCCC
Confidence 99999999763 2 555568899999976321 111 2589999999999999999999999999999999999998 7
Q ss_pred CeE----EEEEEeCCchhHHHHHHHHHHHHHHHHHhcCCCceeeeeEEEEecCCCceeeeec-cccHHHHHhcc------
Q 005800 561 GTC----KMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILSEH------ 629 (676)
Q Consensus 561 ~~~----~~IfK~GDDLRQD~lvlQli~lmd~l~~~~~ldl~l~~Y~Vl~t~~~~GlIE~V~-s~tl~~I~~~~------ 629 (676)
+.| .+|||+|||||||++++|+|++||+||+++++|++++||+|+|||+++|+||||+ +.|+++|++++
T Consensus 814 ~~y~~~~~~i~K~gDDLRQD~~v~Qli~lmn~il~~~~~dL~l~~Y~Vip~s~~~GlIE~V~ns~Tl~~I~~~~~~~~~~ 893 (1091)
T 3hhm_A 814 ELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGGLKGAL 893 (1091)
T ss_dssp TTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCEEEEETTEEEEECCSSEEEHHHHHHSCTTTCTT
T ss_pred ccccccceEEEEcCcchhHHHHHHHHHHHHHHHHHhCCCCceEeeeeEEEccCCCcceeecCCchhHHHHHHhhCccccc
Confidence 788 9999999999999999999999999999999999999999999999999999999 89999999864
Q ss_pred ----ccHHHHHHhhCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 005800 630 ----RSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDR 676 (676)
Q Consensus 630 ----~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGiGDR 676 (676)
+.|.+||++++++ .+| .+|++||++|||||||+|||||||||
T Consensus 894 ~f~~~~L~~~f~~~~~~--~~~---~~ar~nF~~S~A~ysvv~YiLgigDR 939 (1091)
T 3hhm_A 894 QFNSHTLHQWLKDKNKG--EIY---DAAIDLFTRSCAGYCVATFILGIGDR 939 (1091)
T ss_dssp CCCTTHHHHHHHTTSCT--TSH---HHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred ccCchHHHHHHHhcCCh--HHH---HHHHHHHHHHhhhhhheEEEEeecCC
Confidence 3689999999833 344 58999999999999999999999999
No 2
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=100.00 E-value=7.6e-117 Score=1051.31 Aligned_cols=557 Identities=26% Similarity=0.410 Sum_probs=478.5
Q ss_pred EeeCCCCCCeEEEEEeecCCCCCCCCCCCCCCCCCCCCCccCCCCceEEEEEEEeCCcccccceecccccCCCCcccccc
Q 005800 9 FLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEP 88 (676)
Q Consensus 9 ~~s~dl~~~~~~ki~~leg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnew 88 (676)
..+-|++.+++|+|.++.+- |.+..+++||+|+|||||++||.|++|++++|.+.+.||||
T Consensus 346 ~s~~~~~~~f~i~i~~~~~~-------------------~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnew 406 (1092)
T 2y3a_A 346 SHIWDNNNPFQITLVKGNKL-------------------NTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQ 406 (1092)
T ss_dssp --CCCCCSEEEEEECCCCCC-------------------CCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEE
T ss_pred eehhhcCCCEEEEEEEeccC-------------------CCCCCceEEEEEEEEECCEEccCceecccccCCCCCcccee
Confidence 45678899999999988764 22245789999999999999999999999999999999999
Q ss_pred eEecccccCcCccCceEEEEEeec----CC------------------CCceeEeEEEEEeecccccccccceeeEeecC
Q 005800 89 ITLSTKYRDLTAHSQLALTVWDVS----CG------------------KDERLVGGTTILLFNSKMQLKTGKQKLRLWPG 146 (676)
Q Consensus 89 l~fpi~~~dLP~~a~L~~ti~~~~----~~------------------~~~~~vG~~~~~LFd~~~~Lr~G~~~l~lw~~ 146 (676)
|+|||+|+||||+|+||||||++. ++ +...++||+|++|||++|.|++|.+.|++||.
T Consensus 407 l~f~i~~~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~~ 486 (1092)
T 2y3a_A 407 LEFDINICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWSS 486 (1092)
T ss_dssp EEEEEESSSCCTTCEEEEECCCC------------------------------CCEEEEESBCTTCBBCCEEEECCCCTT
T ss_pred EEeCCccccCChhcEEEEEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEeeC
Confidence 999999999999999999999984 21 12359999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCchhhHHHHHHHHhhhhcccccccchhhhhhHHHHHHHHHhhhccCCCCceEEEEEeCCCCc-
Q 005800 147 KEADGSLPTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEH- 225 (676)
Q Consensus 147 ~~~d~~~~~~~p~~~~~~~~~~~~rl~~l~~~~~~G~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~- 225 (676)
.++ +.....+|+ |.... +++.+++++|.|+||+|++
T Consensus 487 ~~~-~~~~~~~p~----------------------g~~~~--------------------~~~~~~~~~L~ief~~~~~~ 523 (1092)
T 2y3a_A 487 FPD-ELEEMLNPM----------------------GTVQT--------------------NPYAENATALHITFPENKKQ 523 (1092)
T ss_dssp CCC-SCCSSSCCS----------------------SCSSC--------------------CSCCTTSCCCEEEECCCSSS
T ss_pred Ccc-cccccCCCC----------------------cccCC--------------------CCCCCCceEEEEEecccCCC
Confidence 765 444555554 11111 1122346899999999999
Q ss_pred eeEeecCCCCCCCCCCccCCCcceeecCCCCCCCCchhHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCC
Q 005800 226 RVVFQDSGANFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLS 305 (676)
Q Consensus 226 ~vv~~~~~~~~~~~~~~~~~~~~~~~~Dpe~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt 305 (676)
||+|++. +++|+|++++.|+ +..|+++||+++++++|++|+++||++.||
T Consensus 524 ~V~~~~~---------------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~~i~~~~p~~~L~ 573 (1092)
T 2y3a_A 524 PCYYPPF---------------------------DKIIEKAAELASG---DSANVSSRGGKKFLAVLKEILDRDPLSQLC 573 (1092)
T ss_dssp CCBCCCT---------------------------THHHHHHHHHC--------------CTTHHHHHHTTTTSCTTSCCC
T ss_pred eEEecCc---------------------------chhhhhHHHhccC---CccccccCCCHHHHHHHHHHHhcCCCCCCC
Confidence 6999774 3588999998754 778899999999999999999999999999
Q ss_pred HHHHHHHHHhHHHhhhc-hhhHhhhhccccCCCHHHHHHHHHHhcccCCCCHhhHhhccCCCCCCHHHHHHHHHHHhcCC
Q 005800 306 GDEKQLLWKFRFSLMSE-KRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERAD 384 (676)
Q Consensus 306 ~~ek~llW~~R~~l~~~-~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~d~~VR~yAV~~L~~~~ 384 (676)
++||++||+||+||.++ |+||||||+||+|+++++++||++||..|++++|++||||||++|+|+.||+|||++|++++
T Consensus 574 ~~ek~llW~~R~~~~~~~p~aL~k~l~sv~w~~~~e~~e~~~lL~~W~~i~p~~ALeLL~~~f~d~~VR~yAV~~L~~~~ 653 (1092)
T 2y3a_A 574 ENEMDLIWTLRQDCRENFPQSLPKLLLSIKWNKLEDVAQLQALLQIWPKLPPREALELLDFNYPDQYVREYAVGCLRQMS 653 (1092)
T ss_dssp HHHHHHHHHTHHHHHHHCGGGHHHHHHHSCTTCHHHHHHHHHHHHTSCCCCHHHHGGGGSTTCCCTTHHHHHHHHHHSSC
T ss_pred HHHHHHHHHhHHHHHhcCcHHHHHHHhhcCCCCHHHHHHHHHHHccCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCC
Confidence 99999999999999985 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcccCcchHHHHHHHHHhhhchhhHHHHHHHHHHHccCcchhhhhHHHHHHHHHHHHhhCCCCCC
Q 005800 385 DDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDG 464 (676)
Q Consensus 385 d~eL~~yLlQLVQaLkyE~~~~s~La~FLi~Ral~n~~ig~~lfW~L~~E~~~~~~~~r~~~~~~~l~~~~~~~l~~~~~ 464 (676)
||+|++||||||||||||++++|+|++|||+||++|++|||+|||+|++|++++....|| ..++++++... +
T Consensus 654 d~~l~~yLpQLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~L~~e~~~~~~~~r~----~~lle~~~~~~----~ 725 (1092)
T 2y3a_A 654 DEELSQYLLQLVQVLKYEPFLDCALSRFLLERALDNRRIGQFLFWHLRSEVHTPAVSVQF----GVILEAYCRGS----V 725 (1092)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSSCHHHHHHHHHHTSCSSHHHHHHHHHHHHHTSHHHHHHH----HHHHHHHHHHT----T
T ss_pred HHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhChHHHHHHHHHeeecccCchHHHHH----HHHHHHHHhhc----H
Confidence 999999999999999999999999999999999999999999999999999998765554 56777776532 2
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhccC--CCChhHHHHHHHHHHHhhhhhcccCCCCcccCCCCceEEEEEecCcce
Q 005800 465 EDGYKLWQSLVRQTELTAQLCSIMRDVGNV--RGNTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESS 542 (676)
Q Consensus 465 ~~~~~~~~~l~~Q~~~i~~L~~i~~~vk~~--~~~~~~k~e~L~~~L~~~~~~l~~~~~~~~lPldP~~~i~~i~~~~~~ 542 (676)
..++.+.+|++|+++|++|+..||.. +++++++.+.|++.|++... ...+ +++++|+||++.|.+|.+++|+
T Consensus 726 ----~~~~~l~~Q~~~~~~L~~is~~ik~~~~~~~r~k~~e~L~~~l~~~~~-~~~~-~~~~lP~~P~v~I~~~~~~~~~ 799 (1092)
T 2y3a_A 726 ----GHMKVLSKQVEALNKLKTLNSLIKLNAVKLSRAKGKEAMHTCLKQSAY-REAL-SDLQSPLNPCVILSELYVEKCK 799 (1092)
T ss_dssp ----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHSTTH-HHHT-SSSCCSSCSSBCCCCCCGGGCE
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhccch-hhcC-CCCCCCCCCceEEEEEecCceE
Confidence 23568999999999999999999953 34567778889888875321 1122 4799999999999999999999
Q ss_pred eeccCCcceEEEEEecC--CCeEEEEEEeCCchhHHHHHHHHHHHHHHHHHhcCCCceeeeeEEEEecCCCceeeeec-c
Q 005800 543 IFKSALHPLRLTFRTAS--GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-S 619 (676)
Q Consensus 543 v~~S~~~Pl~l~f~~~d--g~~~~~IfK~GDDLRQD~lvlQli~lmd~l~~~~~ldl~l~~Y~Vl~t~~~~GlIE~V~-s 619 (676)
||+|+++|++|+|+++| |+.|.+|||+|||||||++++|+|++||.+|+++++|++++||+|+|||+++|+||||+ +
T Consensus 800 V~~S~~~P~rL~~~gsD~~G~~y~~L~K~gDDLRQD~rv~Ql~~lmn~ll~~~~~~L~i~~Y~Vipls~~~GLIE~V~ns 879 (1092)
T 2y3a_A 800 YMDSKMKPLWLVYSSRAFGEDSVGVIFKNGDDLRQDMLTLQMLRLMDLLWKEAGLDLRMLPYGCLATGDRSGLIEVVSTS 879 (1092)
T ss_dssp ECSSTTCCEEEEEECTTTSSSEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCEECCSSSCCEEECCTTC
T ss_pred EeccccCceEEEEEecCCCCceeeEEEecCcccchhHHHHHHHHHHHHHHHhCCCCeEEecceEEEecCCCCeEeeCCCC
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999999999999 9
Q ss_pred ccHHHHHhcc-----------ccHHHHHHhhCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 005800 620 RSLAQILSEH-----------RSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDR 676 (676)
Q Consensus 620 ~tl~~I~~~~-----------~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGiGDR 676 (676)
.|+++|+++. +.+.+||++++++ .+| .++++||++|||||||+|||||||||
T Consensus 880 ~TL~~I~~~~~~~~~~~~f~~~~L~~~~~~~~~~--~~~---~~ar~nF~~SlA~ySvv~YILGlGDR 942 (1092)
T 2y3a_A 880 ETIADIQLNSSNVAATAAFNKDALLNWLKEYNSG--DDL---DRAIEEFTLSCAGYCVASYVLGIGDR 942 (1092)
T ss_dssp CBHHHHHSSSCTTTTTSCSSTTHHHHHHHHHCCT--HHH---HHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccHHHHHHhhccchhhhccCchHHHHHHHHhCCH--HHH---HHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999752 3589999999944 344 58899999999999999999999999
No 3
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=100.00 E-value=5.9e-116 Score=1035.86 Aligned_cols=550 Identities=27% Similarity=0.444 Sum_probs=459.3
Q ss_pred EeeCCCCCCeEEEEEeecCCCCCCCCCCCCCCCCCCCCCccCCCCceEEEEEEEeCCcccccceecccccCCCCcccccc
Q 005800 9 FLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEP 88 (676)
Q Consensus 9 ~~s~dl~~~~~~ki~~leg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnew 88 (676)
..+.|++.+++|+|.++.+... +..+++||+|+|||||++||.|++|+++++.+.+.||||
T Consensus 210 ~s~~~~~~~f~i~i~~~~~~~~-------------------~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~ 270 (940)
T 2wxf_A 210 VSLWSLEQPFSIELIEGRKVNA-------------------DERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQR 270 (940)
T ss_dssp --CTTCCSEEEEEEEEEECCCC----------------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEE
T ss_pred eehhhcCCceEEEEEEecccCC-------------------CCCceEEEEEEEEECCEEccCceecccccCCCCcccceE
Confidence 4567999999999999988422 245799999999999999999999999999999999999
Q ss_pred eEecccccCcCccCceEEEEEeecCC--C----------CceeEeEEEEEeecccccccccceeeEeecCCCCCCCCCCC
Q 005800 89 ITLSTKYRDLTAHSQLALTVWDVSCG--K----------DERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLPTS 156 (676)
Q Consensus 89 l~fpi~~~dLP~~a~L~~ti~~~~~~--~----------~~~~vG~~~~~LFd~~~~Lr~G~~~l~lw~~~~~d~~~~~~ 156 (676)
|+|||+|+||||+|+||||||++.++ + +..++||+|++|||++|.|++|.+.|++||..++ +.....
T Consensus 271 l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~~~~~-~~~~~~ 349 (940)
T 2wxf_A 271 LEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMWPSVPD-EKGELL 349 (940)
T ss_dssp EEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECEECC-------CC
T ss_pred EEcccccccCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEEeeCCcc-cccccC
Confidence 99999999999999999999998542 1 3569999999999999999999999999997665 444444
Q ss_pred CCCCCCCCchhhHHHHHHHHhhhhcccccccchhhhhhHHHHHHHHHhhhccCCCCceEEEEEeCCCCc-eeEeecCCCC
Q 005800 157 TPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEH-RVVFQDSGAN 235 (676)
Q Consensus 157 ~p~~~~~~~~~~~~rl~~l~~~~~~G~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~-~vv~~~~~~~ 235 (676)
+|+ |.... +++.++++.|.|+||+|++ ||+|++.+
T Consensus 350 ~p~----------------------g~~~~--------------------~~~~~~~~~L~ief~~~~~~pV~~~~~~-- 385 (940)
T 2wxf_A 350 NPA----------------------GTVRG--------------------NPNTESAAALVIYLPEVAPHPVYFPALE-- 385 (940)
T ss_dssp CTT----------------------SCSSC--------------------CSCTTTSCEEEEEECCCCC--CBCCCHH--
T ss_pred CCC----------------------cccCC--------------------CCCCCCceEEEEEecccCCCcEEcCCcc--
Confidence 454 11111 1112346899999999999 79998742
Q ss_pred CCCCCCccCCCcceeecCCCCCCCCchhHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCCHHHHHHHHHh
Q 005800 236 FLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKF 315 (676)
Q Consensus 236 ~~~~~~~~~~~~~~~~~Dpe~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~ 315 (676)
...+++.|.|+++++ ++++++|++|+++||+++||++||++||+|
T Consensus 386 --------------------~~~~~~~~~~~~~l~---------------~~~~~~l~~i~~~~p~~~L~~~ek~llW~~ 430 (940)
T 2wxf_A 386 --------------------KILELGRHGERGRIT---------------EEEQLQLREILERRGSGELYEHEKDLVWKM 430 (940)
T ss_dssp --------------------HHHHC-------------------------------CHHHHCC----CCCHHHHHHHHHT
T ss_pred --------------------hhhhcccccccccCC---------------HHHHHHHHHHHccCCcccCCHHHHHHHHHH
Confidence 011255566766653 467889999999999999999999999999
Q ss_pred HHHhhhc-hhhHhhhhccccCCCHHHHHHHHHHhcccCCCCHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHHHHHHH
Q 005800 316 RFSLMSE-KRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQ 394 (676)
Q Consensus 316 R~~l~~~-~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~~yLlQ 394 (676)
|+||.++ |+||||||+||+|+++++++||++||..|++++|++||||||++|+|+.||+|||++|++++|++|++||||
T Consensus 431 R~~~~~~~p~aL~~~l~sv~w~~~~~~~~~~~ll~~W~~~~~~~ALeLL~~~f~d~~Vr~yAv~~L~~~~d~~l~~yL~Q 510 (940)
T 2wxf_A 431 RHEVQEHFPEALARLLLVTKWNKHEDVAQMLYLLCSWPELPVLSALELLDFSFPDCYVGSFAIKSLRKLTDDELFQYLLQ 510 (940)
T ss_dssp HHHHHHHCGGGHHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHHTSTTCCCHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHhcCchHHHHHHhccCCCCHHHHHHHHHHHccCCCCCHHHHHHhcCCcCCCHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999885 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCcchHHHHHHHHHhhhchhhHHHHHHHHHHHccCcchhhhhHHHHHHHHHHHHhhCCCCCCCcchHHHHHH
Q 005800 395 LVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSL 474 (676)
Q Consensus 395 LVQaLkyE~~~~s~La~FLi~Ral~n~~ig~~lfW~L~~E~~~~~~~~r~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l 474 (676)
||||||||++++|+|++|||+||+.|++|||+|||+|++|++++....|| ..++++++.. ++ ..++.+
T Consensus 511 LVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~~~~r~----~~ile~~~~~----~~----~~~~~l 578 (940)
T 2wxf_A 511 LVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALRF----GLIMEAYCRG----ST----HHMKVL 578 (940)
T ss_dssp HHHHGGGCSSSSCHHHHHHHHHHHHCHHHHHHHHHHHHTTTTCHHHHHHH----HHHHHHHHHH----CH----HHHHHH
T ss_pred HHHHHhhccccccHHHHHHHHHHHhChHHHHHHHHHheecccCchHHHHH----HHHHHHHHhh----cH----HHHHHH
Confidence 99999999999999999999999999999999999999999998765554 6677777642 12 456789
Q ss_pred HHHHHHHHHHHHHHHHhccC--CCChhHHHHHHHHHHHhhhhhcccCCCCcccCCCCceEEEEEecCcceeeccCCcceE
Q 005800 475 VRQTELTAQLCSIMRDVGNV--RGNTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLR 552 (676)
Q Consensus 475 ~~Q~~~i~~L~~i~~~vk~~--~~~~~~k~e~L~~~L~~~~~~l~~~~~~~~lPldP~~~i~~i~~~~~~v~~S~~~Pl~ 552 (676)
.+|++|+++|.+|+..||.. +++++++.+.|++.|++... ...+ +++++|++|++.|.+|.+++|+||+|+++|++
T Consensus 579 ~~q~~~~~~L~~i~~~ik~~~~~~~r~k~~~~L~~~l~~~~~-~~~~-~~~~lP~~P~~~I~~~~~~~~~V~~S~~~P~~ 656 (940)
T 2wxf_A 579 MKQGEALSKLKALNDFVKVSSQKTTKPQTKEMMHMCMRQETY-MEAL-SHLQSPLDPSTLLEEVCVEQCTFMDSKMKPLW 656 (940)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHTSHHH-HHHH-SSEEETTEEEEEECEECGGGCEECSSTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHhccch-hhcc-CCCCCCCCCceeEEEeccCceEEcccccCCeE
Confidence 99999999999999999952 45667778889988865321 1112 47999999999999999999999999999999
Q ss_pred EEEEecC---CCeEEEEEEeCCchhHHHHHHHHHHHHHHHHHhcCCCceeeeeEEEEecCCCceeeeec-cccHHHHHhc
Q 005800 553 LTFRTAS---GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILSE 628 (676)
Q Consensus 553 l~f~~~d---g~~~~~IfK~GDDLRQD~lvlQli~lmd~l~~~~~ldl~l~~Y~Vl~t~~~~GlIE~V~-s~tl~~I~~~ 628 (676)
|+|+++| |+.|.+|||+|||||||++++|+|++||.+|+++++|++++||+|+|||+++|+||||+ +.|+++|+++
T Consensus 657 l~~~gsD~~~G~~~~~i~K~gDDLRqD~rv~Ql~~lmn~il~~~~~~L~i~~Y~Vipls~~~GlIE~V~ns~tl~~I~~~ 736 (940)
T 2wxf_A 657 IMYSSEEAGSAGNVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIANIQLN 736 (940)
T ss_dssp EEEECTTTGGGGCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEETTEEEEECCSSEEEHHHHHTC
T ss_pred EEEEecCcCCCcceeEEEecCcccchhHHHHHHHHHHHHHHHhCCCCeEEEeeeEEEecCCCCeEeECCCCccHHHHHHh
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999 8999999975
Q ss_pred c-----------ccHHHHHHhhCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 005800 629 H-----------RSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDR 676 (676)
Q Consensus 629 ~-----------~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGiGDR 676 (676)
. +.+.+||++++++ .+| .++++||++|||||||+|||||||||
T Consensus 737 ~~~~~~~~~f~~~~l~~~~~~~~~~--~~~---~~a~~~F~~S~A~~Svv~YILGlgDR 790 (940)
T 2wxf_A 737 KSNMAATAAFNKDALLNWLKSKNPG--EAL---DRAIEEFTLSCAGYCVATYVLGIGDR 790 (940)
T ss_dssp CSSSTTCCSSGGGHHHHHHHHHSCT--THH---HHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred hccchhhhccCchhHHHHHHHhCCH--HHH---HHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 2 3589999999954 344 58899999999999999999999999
No 4
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=100.00 E-value=1e-113 Score=1017.34 Aligned_cols=553 Identities=27% Similarity=0.480 Sum_probs=470.3
Q ss_pred eCCCCCCeEEEEEeecCCCCCCCCCCCCCCCCCCCCCccCCCCceEEEEEEEeCCcccccceecccccCCCCcccccceE
Q 005800 11 SCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPIT 90 (676)
Q Consensus 11 s~dl~~~~~~ki~~leg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~ 90 (676)
+-|++.+++|+|.+++. +.+ | ....+++||+|+|||||++||.+ .|++++|.+.+.|||||+
T Consensus 213 lw~~~~~f~i~i~~~~~--~~~--~-------------~~~~~~~~V~~~l~~G~~~l~~~-~t~~~~~~~~~~Wne~l~ 274 (961)
T 1e7u_A 213 LWDCDRKFRVKIRGIDI--PVL--P-------------RTADLTVFVEANIQYGQQVLCQR-RTSPKPFTEEVLWNVWLE 274 (961)
T ss_dssp CSCCCSEEEEEEEEEEC--SSC--C-------------TTSCEEEEEEEEEEETTEEEEEE-ECCCEECCSEEEEEEEEE
T ss_pred eeeccCceEEEEeeccc--ccc--c-------------CCCCceEEEEEEEEECCEEcccc-eeeccccCCCcccceeEE
Confidence 56889999999998753 111 1 11347999999999999999995 599999999999999999
Q ss_pred ecccccCcCccCceEEEEEeecCCC----------------CceeEeEEEEEeecccccccccceeeEeecCCCCCCCCC
Q 005800 91 LSTKYRDLTAHSQLALTVWDVSCGK----------------DERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLP 154 (676)
Q Consensus 91 fpi~~~dLP~~a~L~~ti~~~~~~~----------------~~~~vG~~~~~LFd~~~~Lr~G~~~l~lw~~~~~d~~~~ 154 (676)
|||+|+||||+|+||||||++.+++ +..++||+|++|||+++.|++|.+.|++||..++++...
T Consensus 275 f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~l~~G~~~L~lw~~~~~~~~~~ 354 (961)
T 1e7u_A 275 FSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFLLRHGEYVLHMWQLSGKGEDQG 354 (961)
T ss_dssp EEEEGGGCCTTCEEEEEEEEEEC--------------------CEEEEEEEESBCTTSBBCCEEEEEECEECCSCC----
T ss_pred eccccccCCcccEEEEEEEecccCccccccccccccccccccceeEEEEeeeeecCCCccccCCEEEEEeeCcccccccc
Confidence 9999999999999999999986432 346999999999999999999999999999776532211
Q ss_pred CCCCCCCCCCchhhHHHHHHHHhhhhcccccccchhhhhhHHHHHHHHHhhhccCCCCceEEEEEeCCCCceeEeecCCC
Q 005800 155 TSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGA 234 (676)
Q Consensus 155 ~~~p~~~~~~~~~~~~rl~~l~~~~~~G~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~~vv~~~~~~ 234 (676)
+-.|. .|... ..+..++++.|.|+||+|++||+|++.+
T Consensus 355 ~~~~~---------------------~~~~~--------------------~~p~~~~~~~l~ie~~~~~~~v~~p~~~- 392 (961)
T 1e7u_A 355 SFNAD---------------------KLTSA--------------------TNPDKENSMSISILLDNYCHPIALPKHR- 392 (961)
T ss_dssp -CCGG---------------------GGCCC--------------------CCSCTTTSCEEEEEECCSSCBBCCCCCC-
T ss_pred ccccc---------------------cCcCc--------------------CCCCCCCCeEEEEEecCCCCceeecCcc-
Confidence 00000 00000 0122344689999999999999999863
Q ss_pred CCCCCCCccCCCcceeecCCCCCCCCchhHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 005800 235 NFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWK 314 (676)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~Dpe~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~ 314 (676)
..+||+... .+++|++++|++|++|+.+||+++||++||++||+
T Consensus 393 ---------------~~~~~~~~~---------------------~~~~~~~~~~~~l~~i~~~~p~~~L~~~ek~llW~ 436 (961)
T 1e7u_A 393 ---------------PTPDPEGDR---------------------VRAEMPNQLRKQLEAIIATDPLNPLTAEDKELLWH 436 (961)
T ss_dssp ---------------CC-----CC---------------------CCCCCCHHHHHHHHHHHTSCTTSCCCHHHHHHHHH
T ss_pred ---------------ccccccccc---------------------cccCCCHHHHHHHHHHHhcCccCCCCHHHHHHHHH
Confidence 112333211 14577789999999999999999999999999999
Q ss_pred hHHHhhhchhhHhhhhccccCCCHHHHHHHHHHhcc---c--CCCCHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHH
Q 005800 315 FRFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGR---W--EMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQ 389 (676)
Q Consensus 315 ~R~~l~~~~~aL~k~L~sv~W~~~~e~~~a~~LL~~---W--~~i~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~ 389 (676)
||+||.++|+||||||+||+|+++++++||++||.. | ++++|++||||||++|+|+.||+|||++|++++||+|+
T Consensus 437 ~R~~~~~~p~aL~k~l~sv~w~~~~~v~e~~~lL~~~~~W~~~~~~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~d~~l~ 516 (961)
T 1e7u_A 437 FRYESLKDPKAYPKLFSSVKWGQQEIVAKTYQLLAKREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVL 516 (961)
T ss_dssp THHHHTTCGGGHHHHHTSSCTTCHHHHHHHHHHHHCCHHHHHSCCCHHHHHHTTSTTCCCHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHhhCcHHHHHHheecCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHhcCCcCCCHHHHHHHHHHHHhCCHHHHH
Confidence 999999999999999999999999999999999999 9 58999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCcchHHHHHHHHHhhhchhhHHHHHHHHHHHcc-CcchhhhhHHHHHHHHHHHHhhCCCCCCCcch
Q 005800 390 CYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFH-DPVHAKRFYSTHEILEESMMKLTPGVDGEDGY 468 (676)
Q Consensus 390 ~yLlQLVQaLkyE~~~~s~La~FLi~Ral~n~~ig~~lfW~L~~E~~-~~~~~~r~~~~~~~l~~~~~~~l~~~~~~~~~ 468 (676)
+||||||||||||++++|+|++|||+||+.|++|||+|||+|++|++ ++.+..|+ ..++++++. + +|.
T Consensus 517 ~YL~QLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~~~~~r~----~~ll~~~l~----~---~~~ 585 (961)
T 1e7u_A 517 HYLLQLVQAVKFEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRF----AVILEAYLR----G---CGT 585 (961)
T ss_dssp HHHHHHHHHGGGCSSSSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCTTTHHHH----HHHHHHHHT----T---SCH
T ss_pred HHHHHHHHHHhhccccCChHHHHHHHHHhcChHHHHHHHHHhhhhccCChhHHHHH----HHHHHHHHh----h---ccH
Confidence 99999999999999999999999999999999999999999999994 55555554 667777774 2 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCC----hhHHHHHHHHHHHhhhhhcccCCCCcccCCCCceEEEEEecCcceee
Q 005800 469 KLWQSLVRQTELTAQLCSIMRDVGNVRGN----TQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIF 544 (676)
Q Consensus 469 ~~~~~l~~Q~~~i~~L~~i~~~vk~~~~~----~~~k~e~L~~~L~~~~~~l~~~~~~~~lPldP~~~i~~i~~~~~~v~ 544 (676)
.+++.+.+|++++++|.+++..||..+.. .+++.+.|++.|++. ..+ .+|.++.+|+||++.|.+|.+++|+||
T Consensus 586 ~~~~~~~~q~~~~~~L~~i~~~ik~~~~~~~~~~~~~~~~l~~~L~~l-~~i-~vP~~~~lP~dP~v~i~~i~~~~~~V~ 663 (961)
T 1e7u_A 586 AMLHDFTQQVQVIDMLQKVTIDIKSLSAEKYDVSSQVISQLKQKLENL-QNL-NLPQSFRVPYDPGLKAGALVIEKCKVM 663 (961)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSGGGGCCSSCCCHHHHHHHHHHHHHH-HHT-TSCSCEEETTEEEEEEEEECGGGCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhh-hcC-cCCCCccCCCCCceEEEEeecceEEEe
Confidence 66789999999999999999999976532 235677888887662 222 346679999999999999999999999
Q ss_pred ccCCcceEEEEEecCCC-----eEEEEEEeCCchhHHHHHHHHHHHHHHHHHhcCCCceeeeeEEEEecCCCceeeeec-
Q 005800 545 KSALHPLRLTFRTASGG-----TCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP- 618 (676)
Q Consensus 545 ~S~~~Pl~l~f~~~dg~-----~~~~IfK~GDDLRQD~lvlQli~lmd~l~~~~~ldl~l~~Y~Vl~t~~~~GlIE~V~- 618 (676)
+|+++|++|+|+++||. .|.+|||+|||||||++++|+|++||.+|+++++|++++||+|+|||+++|+||||+
T Consensus 664 ~S~~~P~~l~~~g~Dg~~~~~~~~~~i~K~gDDLRQD~~v~Ql~~lmn~il~~~~~~L~i~~Y~Vipls~~~GlIE~V~n 743 (961)
T 1e7u_A 664 ASKKKPLWLEFKCADPTALSNETIGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKD 743 (961)
T ss_dssp SSTTCCEEEEEEESCTTCSCCCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEETTEEEEECCSS
T ss_pred cccCCceEEEEEccCCCcccCCceeEEEecCcccccchhHHHHHHHHHHHHhhcCCCeEEEeeeEEECCCCCCeEEecCC
Confidence 99999999999999985 799999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHhccc---------cHHHHHHhhCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 005800 619 SRSLAQILSEHR---------SIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDR 676 (676)
Q Consensus 619 s~tl~~I~~~~~---------~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGiGDR 676 (676)
+.|+++|++.++ .+.+||.+++++++.| .++++||++|||||||+|||||||||
T Consensus 744 s~tl~~I~~~~~g~~~~f~~~~L~~w~~~~~~~~~~~----~~ar~~F~~S~A~ySvv~YILGigDR 806 (961)
T 1e7u_A 744 ATTIAKIQQSTVGNTGAFKDEVLSHWLKEKCPIEEKF----QAAVERFVYSCAGYCVATFVLGIGDR 806 (961)
T ss_dssp EEEHHHHHHHHSCSSSCCCSSHHHHHHHHHCCSHHHH----HHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CccHHHHHHhccCcccccchhHHHHHHHHhCCChHHH----HHHHHHHHHHHHHHHHHHHHccccCC
Confidence 899999998653 4899999999886654 47999999999999999999999999
No 5
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=100.00 E-value=1.6e-105 Score=906.17 Aligned_cols=411 Identities=46% Similarity=0.756 Sum_probs=370.4
Q ss_pred HHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCCHHHHHHHHHhHHHhhhchhhHhhhhccccCCCHHHHHH
Q 005800 264 HKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQ 343 (676)
Q Consensus 264 ~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~~~aL~k~L~sv~W~~~~e~~~ 343 (676)
.|||+|+||+++|.+|+|+|||+++|++|+.|+++||+++||++||++||+|||||.++|+||||||+||+|++++|++|
T Consensus 3 ~k~~~l~rs~~~~~~d~~lkP~~~~r~~L~~I~~~~p~~~Lt~~ek~llWk~R~~l~~~~~aL~kfL~sV~W~~~~e~~~ 82 (614)
T 3ls8_A 3 SKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQ 82 (614)
T ss_dssp --------------CGGGCCCCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHTHHHHTTCGGGHHHHHTTCCTTSHHHHHH
T ss_pred HHHHHHHHhccCCCCCCCCCcCHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhhChhHHHHHhccCCCCCHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhcccCcc-----------------
Q 005800 344 ALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFERSDK----------------- 406 (676)
Q Consensus 344 a~~LL~~W~~i~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLkyE~~~~----------------- 406 (676)
|++||+.|+|++|+|||||||++|+|+.||+|||+||++++||||++||||||||||||++++
T Consensus 83 a~~LL~~W~~i~~~dALELL~~~f~d~~VR~yAV~~L~~~~D~eL~lYLlQLVQALKyE~~~~~~~~~~~~~~~~~~~~~ 162 (614)
T 3ls8_A 83 ALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDSQSSVS 162 (614)
T ss_dssp HHHHHHHSCCCCHHHHGGGGSTTCCCHHHHHHHHHHHTTSCHHHHHHTHHHHHHHGGGSCHHHHHHTC------------
T ss_pred HHHHHhhCCCCCHHHHHHhCcccCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ---------------------------------------------hHHHHHHHHHhhhchhhHHHHHHHHHHHccCcchh
Q 005800 407 ---------------------------------------------SRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHA 441 (676)
Q Consensus 407 ---------------------------------------------s~La~FLi~Ral~n~~ig~~lfW~L~~E~~~~~~~ 441 (676)
|+||+|||+||++|++|||+|||||++|++++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLi~RAl~n~~ig~~lyW~L~~E~~~~~~~ 242 (614)
T 3ls8_A 163 ENVSNSGINSAEIDSSQIITSPLPSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQ 242 (614)
T ss_dssp ------------CCGGGSTTCCCCC-------------------CCCHHHHHHHHHHTCHHHHHHHHHHHHHHHHCHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCChHHHHHHHHHhcCHHHHHHHHhheeeeccCcccc
Confidence 88999999999999999999999999999986532
Q ss_pred ---hhhHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHhhh-hhcc
Q 005800 442 ---KRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKLRQLLSGLL-SELT 517 (676)
Q Consensus 442 ---~r~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~i~~L~~i~~~vk~~~~~~~~k~e~L~~~L~~~~-~~l~ 517 (676)
..+..+|..+++.|+..+..+++. ...+++.|.+|++|+++|.++++.|+..++++.+|+|+|+++|++.. ..+.
T Consensus 243 ~~~~~~~~~Y~~vl~~~l~~l~~g~~~-~~~~r~~L~~Q~~~~~~L~~l~~~v~~~~~~~~kk~e~L~~~L~~~~~~~l~ 321 (614)
T 3ls8_A 243 QRDPKTHEMYLNVMRRFSQALLKGDKS-VRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLS 321 (614)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHCHHHHCCS
T ss_pred ccchHHHHHHHHHHHHHHHHHHccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhchhhcccc
Confidence 345567777877777665444331 12467899999999999999999999888888899999999997643 3455
Q ss_pred cCCCCcccCCCCceEEEEEecCcceeeccCCcceEEEEEecCCCeEEEEEEeCCchhHHHHHHHHHHHHHHHHHhcCCCc
Q 005800 518 YFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTASGGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDL 597 (676)
Q Consensus 518 ~~~~~~~lPldP~~~i~~i~~~~~~v~~S~~~Pl~l~f~~~dg~~~~~IfK~GDDLRQD~lvlQli~lmd~l~~~~~ldl 597 (676)
.+ +++++|+||++.|.+|.+++|+||+|+++|++|+|.++||+.|.+|||+|||||||++++|+|++||+||+++++|+
T Consensus 322 ~~-~~~~lPl~P~v~I~~i~p~~~~V~~Sk~~P~~l~~~gsDG~~y~~i~K~gDDLRQD~~~~Ql~~l~n~il~~~~ldL 400 (614)
T 3ls8_A 322 DV-ELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDL 400 (614)
T ss_dssp SC-SSEEETTEEEEEEEEECGGGCEECSSTTCCEEEEEEETTSCEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cC-CCCCCCCCCceEEEEEecCeeEEeecccCeEEEEEEccCCCEEEEEEecCCcchHHHHHHHHHHHHHHHHHhcCCCc
Confidence 55 58999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEEecCCCceeeeeccccHHHHHhccccHHHHHHhhCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 005800 598 HLTPYNVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDR 676 (676)
Q Consensus 598 ~l~~Y~Vl~t~~~~GlIE~V~s~tl~~I~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGiGDR 676 (676)
+++||+|+|||+++|+||||++.|+++|+.+.++|.+||+++++++.++|++..++++||++|||||||+|||||||||
T Consensus 401 ~i~~Y~Vipls~~~GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGigDR 479 (614)
T 3ls8_A 401 KLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDR 479 (614)
T ss_dssp CCCCCCEEESSSSEEEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred eeeccEEEEecCCCceEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeeccCC
Confidence 9999999999999999999998899999998899999999999998888887778999999999999999999999999
No 6
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=100.00 E-value=2.8e-102 Score=892.44 Aligned_cols=425 Identities=44% Similarity=0.742 Sum_probs=358.5
Q ss_pred eecCCCCCCCCchhHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHc-CCCCCCCCHHHHHHHHHhHHHhhhchhhHhh
Q 005800 250 IVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILK-YPPTRTLSGDEKQLLWKFRFSLMSEKRALTK 328 (676)
Q Consensus 250 ~~~Dpe~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~-~~p~~~Lt~~ek~llW~~R~~l~~~~~aL~k 328 (676)
+++|||++++||+|.|||+|+||+++|..|+|+||++++|++|+.|+. +||++.||++||++||+||+||+++|+||||
T Consensus 2 ~~~d~~~~~~n~~e~k~~~l~r~~~~~~~d~~lkP~~~~r~~L~~i~~r~~p~~~Lt~eek~llWk~R~~l~~~~~aL~k 81 (696)
T 2x6h_A 2 SHMDSEIQMENLVERKHHRLARSERSGISDRDAKPTASIRDQLHTIVYRYPPTYVLSSEEQDLVWKFRFYLSSHKKALTK 81 (696)
T ss_dssp ------------------------------------CTTHHHHHHHHHHSCSSCCCCSSHHHHHHHHHTTCCCCHHHHHH
T ss_pred CCCCccccCCChHHHHHHHHhhhhccCCCCccCCCCHHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhHHHHhhChhHHHH
Confidence 478999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhccccCCCHHHHHHHHHHhcccCCCCHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhccc-----
Q 005800 329 FLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFER----- 403 (676)
Q Consensus 329 ~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLkyE~----- 403 (676)
||+||+|++++|++||++||..|+|++|+||||||+++|+|+.||+|||++|++++||+|++||||||||||||.
T Consensus 82 fL~sv~W~~~~e~~~a~~lL~~W~~~~~~dALeLL~~~f~~~~VR~yAV~~L~~~~de~L~~YLlQLVQALKyE~~~~~~ 161 (696)
T 2x6h_A 82 FLKCINWKLEDEVTQALWMLANWAPMDVEDALELLSPTFTHPQVRKYAVSRLAQAPDEDLLLYLLQLVQALKYEDPRHIV 161 (696)
T ss_dssp HGGGTTTSCHHHHHHHHHHHHHSCCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHGGGSCHHHHH
T ss_pred HHhhCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhcchhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999992
Q ss_pred --------------------------------------------------------------------------------
Q 005800 404 -------------------------------------------------------------------------------- 403 (676)
Q Consensus 404 -------------------------------------------------------------------------------- 403 (676)
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (696)
T 2x6h_A 162 HLHGCIFPERDVVRSILDDNGSLLDQSSLSDLSATSSGLHASVIPANQRAASVLAAIKSDKSVSPGSAGGSGSGGQGSVA 241 (696)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred ccccccccchhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred --------------------------Cc-------chHHHHHHHHHhhhchhhHHHHHHHHHHHccC-cchh---hhhHH
Q 005800 404 --------------------------SD-------KSRLSQFLVQRSSHNIELASFLRWYVSVEFHD-PVHA---KRFYS 446 (676)
Q Consensus 404 --------------------------~~-------~s~La~FLi~Ral~n~~ig~~lfW~L~~E~~~-~~~~---~r~~~ 446 (676)
++ +|+|++|||+||++|++|||+|||||++|+++ +... ..+..
T Consensus 242 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLl~rA~~n~~i~h~l~W~L~~e~~~~~~~~~~~~~~~~ 321 (696)
T 2x6h_A 242 LPNPSAPATPGSSSLPCDSNSNALMLAEGISFGSVPANLCTFLIQRACTNATLANYFYWYLSIEVEEVESVRKQDERAHD 321 (696)
T ss_dssp -------------------------------------CHHHHHHHHHTTCHHHHHHHHHHHHHHHCC-----CCHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccCCHHHHHHHHHHhhChhhHHHHHHHhHhhccCccccccccchHHH
Confidence 12 78999999999999999999999999999998 3321 34456
Q ss_pred HHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHhh---hhhcccCCCCc
Q 005800 447 THEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKLRQLLSGL---LSELTYFEEPI 523 (676)
Q Consensus 447 ~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~i~~L~~i~~~vk~~~~~~~~k~e~L~~~L~~~---~~~l~~~~~~~ 523 (676)
+|..+++.|+..+.+++. .|.+.++.+.+|++|+++|.+|++.||..++++.+|++.|+++|++. ..++..++ ++
T Consensus 322 ~~~~il~~~l~~l~~g~~-~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~~~~~~~k~e~L~~~L~~~~~~~~~l~~~~-~~ 399 (696)
T 2x6h_A 322 MYAMVLKMFLKVLENGNF-NLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMFKVNFTNFE-PI 399 (696)
T ss_dssp HHHHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHSTTSSSSCTTSCC-CE
T ss_pred HHHHHHHHHHHHhhccCc-ccHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHhcchhhcccccccCC-Cc
Confidence 677788888766544322 33468899999999999999999999998888888999999999875 45566664 79
Q ss_pred ccCCCCceEEEEEecCcceeeccCCcceEEEEEecC-CCeEEEEEEeCCchhHHHHHHHHHHHHHHHHHhcCCCceeeee
Q 005800 524 RSPLAPNILITGIVPSESSIFKSALHPLRLTFRTAS-GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPY 602 (676)
Q Consensus 524 ~lPldP~~~i~~i~~~~~~v~~S~~~Pl~l~f~~~d-g~~~~~IfK~GDDLRQD~lvlQli~lmd~l~~~~~ldl~l~~Y 602 (676)
++|++|++.|.+|.+++|+||+|+++|++|+|+++| |+.|.+|||+|||||||++++|+|++||.||++++++++++||
T Consensus 400 ~lP~~p~v~I~~~~~~~~~V~~S~~~P~~l~~~gsD~G~~y~~i~K~gDDLRQD~rv~Ql~~lmn~il~~~~~~L~i~~Y 479 (696)
T 2x6h_A 400 PFPLDPEIYITKIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPY 479 (696)
T ss_dssp ECSSCTTSEEEEECGGGCEECSSSSCCEEEEEEETTTTCEEEEEEECSSCTHHHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred cCCCCCCeEEEEEecCeEEEcccccCCeEEEEEecCCCCceeEEEecCcccchhHHHHHHHHHHHHHHHhCCCCcEEecc
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCceeeeeccccHHHHHhccccHHHHHHhhCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 005800 603 NVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDR 676 (676)
Q Consensus 603 ~Vl~t~~~~GlIE~V~s~tl~~I~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGiGDR 676 (676)
+|+|||+++||||||++.|+++|++++++|.+||.++++++..||++..++++||++|||||||+|||||||||
T Consensus 480 ~Vipls~~~GLIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGlGDR 553 (696)
T 2x6h_A 480 KVLATSSKHGFLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDR 553 (696)
T ss_dssp CEEESSTTCEEEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred EEEeccCCCCeeeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 99999999999999998899999999999999999999999889988778999999999999999999999999
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=96.62 E-value=0.015 Score=53.71 Aligned_cols=106 Identities=19% Similarity=0.177 Sum_probs=70.0
Q ss_pred EEEeeCCCCCCeEEEEEeecCCCCCCCCCCCCCCCCCCCCCccCCCCceEEEEEEEeCCcccccceecccccCCCCcccc
Q 005800 7 RFFLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWN 86 (676)
Q Consensus 7 ~~~~s~dl~~~~~~ki~~leg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wn 86 (676)
.|.+..+-...-.++|.-+++..= +.. .....++-||.+.+..++..-....+|..+.-+.++.||
T Consensus 9 ~~g~~~~~~~~~~L~V~v~~a~~L----~~~----------d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wn 74 (153)
T 3b7y_A 9 VFGLLEDEENSRIVRVRVIAGIGL----AKK----------DILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWN 74 (153)
T ss_dssp EEESSSCCTTCEEEEEEEEEEESC----C-----------------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCC
T ss_pred ccCcccCCCCccEEEEEEEEeeCC----CCC----------CCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCC
Confidence 566777777777777777777421 110 011246779999988543221223456555545568999
Q ss_pred cceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 87 EPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 87 ewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
|.+.|++. +.+..|.|+|||...-++...+|.+.++|-+-
T Consensus 75 e~f~f~v~----~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l 114 (153)
T 3b7y_A 75 EEILFRVH----PQQHRLLFEVFDENRLTRDDFLGQVDVPLYPL 114 (153)
T ss_dssp EEEEEEEC----TTTCEEEEEEEECCSSSCCEEEEEEEEECCSC
T ss_pred CEEEEEec----CCCCEEEEEEEECCCCcCCCeeEEEEEEHHHc
Confidence 99999876 24678999999987655667999999999653
No 8
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.59 E-value=0.011 Score=54.84 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=56.4
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+..+++ ...+|+.+.-+.++.|||.+.|++...+|. +..|.|+|||...-.....+|.+.++|-+-
T Consensus 62 ~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 136 (152)
T 1rsy_A 62 TSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELG-GKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 136 (152)
T ss_dssp CCCEEEEEEEETTCC---SCEECCCCTTCSSCEEEEEEEECCCHHHHT-TCEEEEEEEECCSSSCCEEEEEEEEEGGGC
T ss_pred CcCeEEEEEEEcCCC---ceEeccccCCCCCCcCcccEEEeecHHHcC-CCEEEEEEEECCCCCCCcEEEEEEEEchhc
Confidence 467799998875443 234565555455789999999998776663 578999999987655667999999998653
No 9
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=96.57 E-value=0.023 Score=51.20 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=56.7
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.++-||.+.+..+++.. ...+|..+.-+.++.|||.+.|++.-.+|. +..|.|+|||.....+...+|.+.++|-+
T Consensus 36 ~~dpyv~v~~~~~~~~~-~~~kT~~~~~t~nP~wne~f~f~v~~~~l~-~~~l~~~V~d~~~~~~~~~lG~~~i~l~~ 111 (138)
T 3n5a_A 36 TSDPYVKVWLMYKDKRV-EKKKTVTKKRNLNPIFNESFAFDIPTEKLR-ETTIIITVMDKDKLSRNDVIGKIYLSWKS 111 (138)
T ss_dssp BCCEEEEEEEEETTEEE-EEEECCCCSSCSSCEEEEEEEEECCGGGGG-GEEEEEEEEECCSSSCCEEEEEEEESSSS
T ss_pred CcCeEEEEEEEeCCCcc-ceEeCccccCCCCCcCcceEEEECChhhcC-ceEEEEEEEECCCCCCCcEEEEEEEcccc
Confidence 36779999988665432 233565555556789999999998776663 56799999998765566799999998853
No 10
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=96.56 E-value=0.02 Score=51.66 Aligned_cols=76 Identities=20% Similarity=0.242 Sum_probs=56.1
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+..+++.. ...+|+.+.-+.++.|||.+.|++...++ +..|.|+|||....++...+|.+.++|-+-
T Consensus 36 ~~dpyv~v~~~~~~~~~-~~~kT~~~~~t~nP~wne~f~f~~~~~~~--~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l 111 (137)
T 3rdl_A 36 LSDPYVKLKLIPDPKNE-SKQKTKTIRSTLNPQWNESFTFKLKPSDK--DRRLSVEIWDWDRTTRNDFMGSLSFGVSEL 111 (137)
T ss_dssp CCCEEEEEEEECCTTCC-CCEECCCCCSCSSCEEEEEEEEECCGGGG--GCEEEEEEEECCSSSCCEEEEEEEEEHHHH
T ss_pred CCCeeEEEEEEcCCCCC-eeecCceEcCCCCCCcccEEEEEcCchhc--CCEEEEEEEECCCCCCCceEEEEEEeHHHh
Confidence 46779999886543222 23456665555678999999999876665 457999999987655667999999999653
No 11
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=96.50 E-value=0.013 Score=54.29 Aligned_cols=76 Identities=17% Similarity=0.253 Sum_probs=57.4
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.++-||.+.+..+++.. ...+|+.+.-+.++.|||.+.|++...+|. ++.|.|+|||.........+|.+.++|-.
T Consensus 50 ~~dpyv~v~~~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 50 LSDPYVKVNLYHAKKRI-SKKKTHVKKCTPNAVFNELFVFDIPCESLE-EISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CCCEEEEEEEEETTEEE-EEEECCCCCSCSSEEEEEEEEEECCSSSST-TEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred CCCeEEEEEEEeCCeEe-ceEecCcccCCCCCeecceEEEECCHHHhC-ceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 36789999998776543 223565555455689999999998877764 57899999998765566799999998844
No 12
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=96.45 E-value=0.016 Score=52.74 Aligned_cols=77 Identities=22% Similarity=0.267 Sum_probs=56.9
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+..++... ...+|+.+.-+.++.|||.+.|+ +...+| .+..|.|+|||...-++...+|.+.++|=+-
T Consensus 39 ~~DPyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l-~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l 116 (134)
T 2b3r_A 39 DPNPYVKTYLLPDTHKT-SKRKTKISRKTRNPTFNEMLVYSGYSKETL-RQRELQLSVLSAESLRENFFLGGITLPLKDF 116 (134)
T ss_dssp CCCEEEEEEEESCSSSC-CCEECCCCCSCSSCEEEEEEEEESCCHHHH-TTCEEEEEEEECCSSSCCEEEEEEEEEGGGS
T ss_pred CCCeEEEEEEEcCCCCC-ceecCCcCcCCCCCCCccEEEECCcCHHHh-CcCEEEEEEEECCCCCCCcEEEEEEEEhhhc
Confidence 36779999987543321 23456655545568999999999 877666 4578999999987655567999999998653
No 13
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=96.44 E-value=0.021 Score=53.20 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=57.2
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.++-||.+.+..+++.. ...+|..+.-+.++.|||.+.|+|...++. +..|.|+|||....+....+|.+.++|-.
T Consensus 45 ~~dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 45 LSDPYVKIHLMQNGKRL-KKKKTTIKKNTLNPYYNESFSFEVPFEQIQ-KVQVVVTVLDYDKIGKNDAIGKVFVGYNS 120 (159)
T ss_dssp CCCEEEEEEEEETTEEE-EEEECCCCCSCSSCEEEEEEEEECCGGGGG-GCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred CCCeEEEEEEEeCCcee-ceeeCceecCCCCCcccceEEEEcCHHHhC-CcEEEEEEEECCCCCCCceEEEEEECCCC
Confidence 46789999998766533 233565555455789999999998777664 46799999998765566799999999864
No 14
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.43 E-value=0.024 Score=52.25 Aligned_cols=76 Identities=18% Similarity=0.265 Sum_probs=55.9
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+-.+++. ....+|+.+.-..++.|||.+.|++.-.++ +..|.|+|||.....+...+|.+.++|-+-
T Consensus 51 ~~dpyv~v~~~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~~--~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 126 (149)
T 1a25_A 51 LSDPYVKLKLIPDPKS-ESKQKTKTIKCSLNPEWNETFRFQLKESDK--DRRLSVEIWDWDLTSRNDFMGSLSFGISEL 126 (149)
T ss_dssp CCCEEEEEEEESCTTC-SSCEECCCCSSCSSCEEEEEEEEECCSGGG--GCEEEEEEEECCSSSCCEEEEEEEEEHHHH
T ss_pred CcCeEEEEEEECCCCC-cceEecceeCCCCCCcCCcEEEEEeccccC--CCEEEEEEEECCCCCCCCEEEEEEEEHHHh
Confidence 4678999988754432 233456555545578999999999876554 467999999987655667999999998653
No 15
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=96.36 E-value=0.018 Score=52.57 Aligned_cols=75 Identities=19% Similarity=0.286 Sum_probs=56.1
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+..+++. ..+|+.+.-+.++.|||.+.|++...++. +..|.|+|||.....+...+|.+.++|-+-
T Consensus 54 ~~dpyv~v~l~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 128 (143)
T 3f04_A 54 TSDPYVKVFLLPDKKK---KFETKVHRKTLNPVFNEQFTFKVPYSELG-GKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 128 (143)
T ss_dssp CCCEEEEEEEESCCSC---CEECCCCCSCSSCEEEEEEEECCCHHHHT-TCEEEEEEEECCSSSCCEEEEEEEEEGGGC
T ss_pred CcCcEEEEEEECCCCc---cEECccCcCCCCCcCcCeEEEeecHhhcC-CCEEEEEEEeCCCCCCCceEEEEEEEHHHc
Confidence 4678999988655432 34565555455689999999998776664 378999999987655667999999998653
No 16
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=96.22 E-value=0.046 Score=49.52 Aligned_cols=86 Identities=14% Similarity=0.207 Sum_probs=60.4
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+-.+++ ...+|..+.-+.++.|||.+.|+ +...++. +..|.|+|||...-.+...+|.+.++|=+-
T Consensus 43 ~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~-~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l 118 (138)
T 1ugk_A 43 TSDPYIKMTILPEKK---HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQ-ELALHFTILSFDRFSRDDIIGEVLIPLSGI 118 (138)
T ss_dssp BCEEEEEEEEETTTC---SEEECCCCSSCSSCEEEEEEEEECCCSTTGG-GCEEEEEEEEECSSCCCCCCEEEEEECTTC
T ss_pred CCCCEEEEEEecCCC---ceEecCcCcCCCCCcEeeEEEEcCcCHHHhc-cCEEEEEEEECCCCCCCcEEEEEEEehhHc
Confidence 367799998875443 23456655545568999999995 7777664 578999999987655566899999998653
Q ss_pred cccccccceeeEeec
Q 005800 131 KMQLKTGKQKLRLWP 145 (676)
Q Consensus 131 ~~~Lr~G~~~l~lw~ 145 (676)
..|.-...+|.
T Consensus 119 ----~~~~~~~~~~~ 129 (138)
T 1ugk_A 119 ----ELSEGKMLMNR 129 (138)
T ss_dssp ----CCTTCCEEEEE
T ss_pred ----cCCCCcchhhh
Confidence 33333335564
No 17
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=96.17 E-value=0.014 Score=53.34 Aligned_cols=76 Identities=17% Similarity=0.196 Sum_probs=56.2
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+..++.. ...+|..+.-..++.|||.+.|++...+|+ +..|.|+|||...-.+...+|.+.++|=+-
T Consensus 43 ~sDPyv~v~l~~~~~~--~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~-~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l 118 (138)
T 1wfm_A 43 GCDCYVQGSVANRTGS--VEAQTALKKRQLHTTWEEGLVLPLAEEELP-TATLTLTLRTCDRFSRHSVAGELRLGLDGT 118 (138)
T ss_dssp CCCEEEEEEEEETTEE--EEEECCCCCCCSSEECSSCEEEECCTTSST-TCEEEEEEEECCSSCTTSCSEEEEEESSSS
T ss_pred CcceEEEEEEEcCCCc--ccEecccCcCCCCCcCCceEEEEecHHHcC-CCEEEEEEEECCCCCCCcEEEEEEEEcccc
Confidence 3677999988653221 123565555455689999999998887774 468999999987655567899999998764
No 18
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=96.12 E-value=0.035 Score=52.19 Aligned_cols=76 Identities=22% Similarity=0.313 Sum_probs=55.3
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.++-||.+.+..++.. ....+|+.+.-+.++.|||.+.|++...+|. +..|.|+|||....++...+|.+.++|-+
T Consensus 57 ~~DPyv~v~l~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~ 132 (166)
T 2cm5_A 57 YSDPFVKLWLKPDMGK-KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLA-KKSLDISVWDYDIGKSNDYIGGCQLGISA 132 (166)
T ss_dssp CCCEEEEEEEETC----CCEEECCCCCSCSSCEEEEEEEEECCGGGGG-GCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred CCCcEEEEEEECCCCc-cceEeCCcccCCCCCcccceEEEEcchHhcC-CCEEEEEEEECCCCCCCcEEEeEEEeccc
Confidence 4677999988644322 1234566555555789999999998776663 67899999998765566799999999854
No 19
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=96.10 E-value=0.025 Score=51.54 Aligned_cols=76 Identities=20% Similarity=0.234 Sum_probs=55.1
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.++-||.+.+..++... ...+|+.+.-+.++.|||.+.|+ +...++. ...|.|+|||...-++...+|.+.++|=+
T Consensus 49 ~~dpyv~v~~~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~-~~~l~i~V~d~d~~~~d~~iG~~~i~l~~ 125 (142)
T 2chd_A 49 LADPYVKLHLLPGASKS-NKLRTKTLRNTRNPVWNETLQYHGITEEDMQ-RKTLRISVCDEDKFGHNEFIGETRFSLKK 125 (142)
T ss_dssp CCCEEEEEEEESCCSGG-GEEECCCCCSCSSCEEEEEEEEESCCHHHHH-HCEEEEEEEEECTTSCEEEEEEEEEEGGG
T ss_pred CCCCEEEEEEEcCCCCc-ceeeCCcCCCCCCCcCcCEEEEcccCHHHcc-CCEEEEEEEECCCCCCCcEEEEEEEEHHH
Confidence 46789999988544322 23456655545578999999998 5544432 46899999998765566799999999865
No 20
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=96.08 E-value=0.039 Score=51.18 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=56.0
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCC-ceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKD-ERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~-~~~vG~~~~~LFd 129 (676)
.++-||.+.+..++... ...+|+.+.-+.++.|||.+.|++...++.. .|.|+|||...... ...+|.+.++|-+
T Consensus 46 ~~Dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~--~L~i~V~d~d~~~~~d~~lG~~~i~l~~ 121 (153)
T 3fbk_A 46 TCDPYVKISLIPEDSRL-RHQKTQTVPDCRDPAFHEHFFFPVQEEDDQK--RLLVTVWNRASQSRQSGLIGCMSFGVKS 121 (153)
T ss_dssp CCCEEEEEEEESCSCCT-TCEECCCCTTCSSCEEEEEEEEECCGGGTTS--EEEEEEEECCSSGGGCEEEEEEEEEHHH
T ss_pred CCCEEEEEEEEcCCCCc-cEEeccccCCCCCCccccEEEEecccHHhCC--EEEEEEEeCCCCCCCCcEEEEEEEEHHH
Confidence 46789999988544322 3345666555567899999999987777764 49999999876444 5799999999965
No 21
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.08 E-value=0.029 Score=50.90 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=54.9
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.++-||.+.+- ++ ..+|+.+.-..++.|||.++|++.-.++...+.|.|+|||.....+...+|.+.++|-+
T Consensus 26 ~~dpyv~v~~~--~~----~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~ 97 (140)
T 2dmh_A 26 KPDPIVSVIFK--DE----KKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKD 97 (140)
T ss_dssp CCCEEEEEECS--SC----EEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGG
T ss_pred CCCeEEEEEEC--CE----eEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHH
Confidence 35678887654 22 24565555445789999999999887788889999999998765556789999999865
No 22
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.02 E-value=0.043 Score=48.89 Aligned_cols=76 Identities=21% Similarity=0.291 Sum_probs=51.0
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecc-cccCcCccCceEEEEEeecCCCC--ceeEeEEEEEee
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLST-KYRDLTAHSQLALTVWDVSCGKD--ERLVGGTTILLF 128 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi-~~~dLP~~a~L~~ti~~~~~~~~--~~~vG~~~~~LF 128 (676)
.++-||.+.+..++.. ....+|+.+.-+.++.|||.+.|++ ...++ ....|.|+|||...... ...+|.+.++|=
T Consensus 38 ~~dpyv~v~~~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~-~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~ 115 (129)
T 2bwq_A 38 PRNPYVKIYFLPDRSD-KNKRRTKTVKKTLEPKWNQTFIYSPVHRREF-RERMLEITLWDQARVREEESEFLGEILIELE 115 (129)
T ss_dssp CBCEEEEEEEESSCSG-GGEEECCCCSSBSSCEEEEEEEECSCCGGGG-GGCEEEEEEEEC-------CEEEEEEEEEGG
T ss_pred CCCCEEEEEEecCCCC-CcceecccccCCCCCccccEEEEccCCHHHh-cCCeEEEEEEECCcCcCcCCceeEEEEEEcc
Confidence 3677999988754422 1233565555455689999999994 44443 46799999999876544 678999999986
Q ss_pred c
Q 005800 129 N 129 (676)
Q Consensus 129 d 129 (676)
+
T Consensus 116 ~ 116 (129)
T 2bwq_A 116 T 116 (129)
T ss_dssp G
T ss_pred c
Confidence 5
No 23
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.01 E-value=0.035 Score=55.46 Aligned_cols=66 Identities=20% Similarity=0.297 Sum_probs=54.8
Q ss_pred CCCcccccceEecccccCcCccCceEEEEEeecCC----CCceeEeEEEEEeeccccc-ccccceeeEeecC
Q 005800 80 GPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCG----KDERLVGGTTILLFNSKMQ-LKTGKQKLRLWPG 146 (676)
Q Consensus 80 ~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~----~~~~~vG~~~~~LFd~~~~-Lr~G~~~l~lw~~ 146 (676)
.+.+.|+|.|.+.|...+. ..+-|.||++-++.. +.+.|+|-+-++|++.+|+ |+.|.+.|.++..
T Consensus 87 nk~P~w~EtIKi~LP~~~~-~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~dG~~L~DG~H~L~vyk~ 157 (220)
T 3l4c_A 87 VKQPRWFETVKVAIPIEDV-NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYDGTTLRDGEHDLIVYKA 157 (220)
T ss_dssp CSSCCCCEEEEEEECTTSS-TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTTSCBCCSEEEEEEEEEC
T ss_pred CCCCCceEeEEEeeChhhc-CCeEEEEEEEEecccccccccCCeeEEEEEEcccCCCcEEccCCEEEEEEEc
Confidence 3568899999999888766 568999999987643 2346999999999999875 9999999999863
No 24
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=96.00 E-value=0.037 Score=50.87 Aligned_cols=77 Identities=17% Similarity=0.174 Sum_probs=56.8
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+..++... ...+|..+.-+.++.|||.+.|++...++. ...|.|+|||....++...+|.+.++|-+-
T Consensus 44 ~~dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~~~-~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l 120 (148)
T 3fdw_A 44 RSNPYVKTYLLPDKSRQ-GKRKTSIKRDTVNPLYDETLRYEIPESLLA-QRTLQFSVWHHGRFGRNTFLGEAEIQMDSW 120 (148)
T ss_dssp BCCEEEEEEEETCCSGG-GEEECCCCSSCSSCEEEEEEEEECCSTTGG-GCEEEEEEEEECGGGCEEEEEEEEEEHHHH
T ss_pred CCCeEEEEEEEcCCccc-CccccccCCCCCCCcEeeEEEEEeChhHhC-ceEEEEEEEECCCCcCCcEEEEEEEEcccc
Confidence 36779999887544322 234566555455689999999998877763 567999999987655667999999999653
No 25
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.94 E-value=0.038 Score=50.27 Aligned_cols=75 Identities=20% Similarity=0.263 Sum_probs=53.8
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecc-cccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLST-KYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi-~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+-.+++. ..+|+.+.-+.++.|||.+.|++ ...++ ....|.|+|||...-.+...+|.+.++|-+-
T Consensus 46 ~~dpyv~v~~~~~~~~---~~kT~v~~~t~nP~wne~f~f~~~~~~~~-~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l 121 (141)
T 2d8k_A 46 TSDPFVKIYLLPDKKH---KLETKVKRKNLNPHWNETFLFEGFPYEKV-VQRILYLQVLDYDRFSRNDPIGEVSIPLNKV 121 (141)
T ss_dssp CCCEEEEEEEESCCSS---EEECCCCTTCSSCCCCEEEEECSCCHHHH-TTSEEEEEEEECCSSSSCEEEEEEEEETTTS
T ss_pred CCCcEEEEEEECCCCc---cEeCceEcCCCCCccccEEEECccCHHHc-ccCEEEEEEEECCCCCCCcEEEEEEEEhhhh
Confidence 4678999988754432 33555554445688999999984 33344 3578999999987655667999999998653
No 26
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=95.92 E-value=0.017 Score=54.25 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=56.8
Q ss_pred CCceEEEEEEEeC-CcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYID-GAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~-~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+... +... ...+|+.+.-+.++.|||.+.|+|...+| .+..|.|+|||....++...+|.+.++|=+-
T Consensus 63 ~sDPyVkv~l~~~~~~~~-~~~kT~v~~~tlnP~wnE~F~f~v~~~~l-~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l 140 (155)
T 2z0u_A 63 DQKVNIRVAVLPCSESTT-CLFRTRPLDASDTLVFNEVFWVSMSYPAL-HQKTLRVDVCTTDRSHLEECLGGAQISLAEV 140 (155)
T ss_dssp CSEEEEEEEEESCSCHHH-HEEECCCEECCSSEEEEEEEEEECCHHHH-HHCEEEEEEEEECTTSCEEEEEEEEEECTTS
T ss_pred CCCEEEEEEEecCCCCCc-cceeCCcCCCCCCCccccEEEEEcCHHHh-CcCEEEEEEEECCCCCCCcEEEEEEEEHHHc
Confidence 4688999998742 1111 12456655545578999999999887766 3678999999987766677999999998653
No 27
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.84 E-value=0.025 Score=51.89 Aligned_cols=75 Identities=19% Similarity=0.219 Sum_probs=55.1
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+..+++. ..+|+.+.-..++.|||.+.|++...+++ ...|.|+|||...-.+...+|.+.++|=+-
T Consensus 53 ~~dpyv~v~l~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l 127 (147)
T 2enp_A 53 HSNPYVKICLLPDQKN---SKQTGVKRKTQKPVFEERYTFEIPFLEAQ-RRTLLLTVVDFDKFSRHCVIGKVSVPLCEV 127 (147)
T ss_dssp CCCCEEEEEEETCCSS---CEECCCCCSCSSCCCCBCCEECCCHHHHH-HSEEEEEEECCSTTCCSCCCEEEEEETTTS
T ss_pred CCCcEEEEEEEeCCCc---ceEeecccCCCCCeEeeeEEEEeChHHhc-cCEEEEEEEECCCCcCCcEEEEEEEechhc
Confidence 4677999988754432 34566555455689999999998766653 458999999987655566899999998653
No 28
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=95.81 E-value=0.05 Score=51.63 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=51.6
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+......-....+|+.+.-+.++.|||.+.|++. +....|.|+|||.........||.+.++|-+-
T Consensus 28 ~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~----~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l 102 (176)
T 3m7f_B 28 ASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL----PQRHRILFEVFDENRLTRDDFLGQVDVPLYPL 102 (176)
T ss_dssp CCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC----TTTCEEEEEEEECC----CEEEEEEEEESCSC
T ss_pred CcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc----CCCCEEEEEEEECCCCCCCcEEEEEEEEHHHc
Confidence 3677999988853321112335665554556899999999876 44578999999986655567899999998764
No 29
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=95.52 E-value=0.066 Score=54.41 Aligned_cols=76 Identities=16% Similarity=0.221 Sum_probs=58.0
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.++-||.+.+..+|+... ..+|..+.-+.++.|||.+.|++...+|. +..|.|+|||....+....+|.+.+++-+
T Consensus 170 ~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 245 (284)
T 2r83_A 170 LSDPYVKIHLMQNGKRLK-KKKTTIKKNTLNPYYNESFSFEVPFEQIQ-KVQVVVTVLDYDKIGKNDAIGKVFVGYNS 245 (284)
T ss_dssp CCCEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEEEECCTTTGG-GEEEEEEEEECCSSSCCCEEEEEEEETTC
T ss_pred CcCeEEEEEEEeCCcEee-eeccceecCCCCCEEceeEEEeCCHHHhC-ceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 468899999987765432 23555555455689999999999877764 45799999998765566799999999865
No 30
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=95.48 E-value=0.021 Score=51.97 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=53.0
Q ss_pred CCceEEEEEEEeCCccc--------ccceecccccCCCCcccccceEec-ccccCcCccCceEEEEEeecCCCCceeEeE
Q 005800 52 RPELYVECALYIDGAPF--------GLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGG 122 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l--------~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~ 122 (676)
.++-||.+.+-.++... ....+|+.+.-+.++.|||.+.|+ +...++ ....|.|+|||...-++...+|.
T Consensus 38 ~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l-~~~~l~i~V~d~d~~~~~~~lG~ 116 (142)
T 1rh8_A 38 YSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQL-MKKTLEVTVWDYDRFSSNDFLGE 116 (142)
T ss_dssp CSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHH-TTCEEEEEEEEECSSSCEEEEEE
T ss_pred CCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHc-cCCEEEEEEEECCCCCCCceEEE
Confidence 35679998876543221 011234433323458899999998 777666 35689999999876556679999
Q ss_pred EEEEeec
Q 005800 123 TTILLFN 129 (676)
Q Consensus 123 ~~~~LFd 129 (676)
+.++|-+
T Consensus 117 ~~i~l~~ 123 (142)
T 1rh8_A 117 VLIDLSS 123 (142)
T ss_dssp EEEETTS
T ss_pred EEEeccc
Confidence 9999854
No 31
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.47 E-value=0.059 Score=48.99 Aligned_cols=75 Identities=16% Similarity=0.161 Sum_probs=54.5
Q ss_pred CceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCC--CceeEeEEEEEeec
Q 005800 53 PELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGK--DERLVGGTTILLFN 129 (676)
Q Consensus 53 ~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~--~~~~vG~~~~~LFd 129 (676)
++-||.+.+..+++.. ...+|..+.-+.++.|||.+.|++...++. +..|.|+|||...-. ....+|.+.++|=+
T Consensus 44 ~dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~ 120 (142)
T 2dmg_A 44 SDPYVRMYLLPDKRRS-GRRKTHVSKKTLNPVFDQSFDFSVSLPEVQ-RRTLDVAVKNSGGFLSKDKGLLGKVLVALAS 120 (142)
T ss_dssp CCEEEEEEEESCCCSS-SCEECCCCCSCSSCEEEEEEEECCCHHHHH-HCEEEEEEEECCCSSCCSCCCCEEEEEECCC
T ss_pred CCeeEEEEEEcCCCCC-CcccCCccCCCCCCCcCceEEEEecHHHhC-cCEEEEEEEECCCccccCCcEEEEEEEeccc
Confidence 6779999998655422 234566655555789999999998766553 468999999986533 23589999999854
No 32
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=95.40 E-value=0.037 Score=52.47 Aligned_cols=74 Identities=22% Similarity=0.304 Sum_probs=55.3
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEE-eecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVW-DVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~-~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+..+++.. ...+|..+.-+.++.|||.++|++. +....|.|+|| |.....+...+|.+.++|=+-
T Consensus 51 ~~DPyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~----~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l 125 (171)
T 2q3x_A 51 TPAPYVKVYLLENGACI-AKKKTRIARKTLDPLYQQSLVFDES----PQGKVLQVIVWGDYGRMDHKCFMGVAQILLEEL 125 (171)
T ss_dssp CCEEEEEEEEEETTEEE-EEEECCCCCSCSSCEEEEEEECSSC----CTTEEEEEEEEEECSTTCSSEEEEEEEECGGGS
T ss_pred CCCceEEEEEECCCccc-cceeCccCCCCCCCCCCcEEEEEec----CCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHc
Confidence 46789999998766533 2335655554556899999999985 34689999999 876655667999999998664
No 33
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=95.40 E-value=0.039 Score=50.00 Aligned_cols=68 Identities=15% Similarity=0.216 Sum_probs=49.5
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.+|-||.+.+ ++.... +|..+.-+.++.|||.++|++. ....|.|+|||...-.+...+|.+.++|=+
T Consensus 37 ~~DPyv~v~l--~~~~~~---~T~~~~~t~nP~WnE~f~f~v~-----~~~~L~~~V~d~d~~~~dd~iG~~~i~l~~ 104 (136)
T 1gmi_A 37 LLDPYIALNV--DDSRIG---QTATKQKTNSPAWHDEFVTDVC-----NGRKIELAVFHDAPIGYDDFVANCTIQFEE 104 (136)
T ss_dssp CCCEEEEEEE--TTEEEE---ECCCCSSCSSCEEEEEEEEEEE-----EECEEEEEEEECCSSSSCEEEEEEEEEHHH
T ss_pred CcCcEEEEEE--CCeEee---eeeEECCCcCCccCCEEEEEec-----CCCEEEEEEEeCCCCCCCCEEEEEEEEHHH
Confidence 3678999886 544332 4555444557899999999863 338999999997655556799999999843
No 34
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=95.39 E-value=0.06 Score=48.44 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=50.7
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+ +++ ..+|+.+.-+.++.|||.+.|++. + ..+.|.|+|||.....+...+|.+.++|-+-
T Consensus 33 ~~dpyv~v~~--~~~----~~kT~~~~~t~nP~wne~f~f~~~--~--~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l 101 (133)
T 2ep6_A 33 KSDPFCLLEL--GND----RLQTHTVYKNLNPEWNKVFTFPIK--D--IHDVLEVTVFDEDGDKPPDFLGKVAIPLLSI 101 (133)
T ss_dssp CCCEEEEEEE--TTE----EEECCCCSSCSSCCCCEEEEEEES--C--TTCEEEEEEEEEETTEEEEECCBCEEEGGGC
T ss_pred CcCeEEEEEE--CCE----EEEeeeecCCCCCccccEEEEEec--C--CCCEEEEEEEECCCCCCCCeeEEEEEEHHHc
Confidence 4677888766 443 235655544556899999999975 2 3578999999987655567899999998663
No 35
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=95.37 E-value=0.054 Score=48.95 Aligned_cols=76 Identities=21% Similarity=0.291 Sum_probs=53.2
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEec-ccccCcCccCceEEEEEeecCCCC--ceeEeEEEEEee
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKD--ERLVGGTTILLF 128 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~--~~~vG~~~~~LF 128 (676)
.++-||.+.+..++.. ....+|..+.-+.++.|||.+.|+ +...++ .+..|.|+|||...... ...+|.+.++|=
T Consensus 41 ~~dpyv~v~~~~~~~~-~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~-~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~ 118 (141)
T 1v27_A 41 PRNPYVKIYFLPDRSD-KNKRRTKTVKKTLEPKWNQTFIYSPVHRREF-RERMLEITLWDQARVREEESEFLGEILIELE 118 (141)
T ss_dssp CCCEEEECCCSSCCSS-SSCCBCCCCSSCSSCCCCCCCEECSCCTTGG-GTCEEEEEEEEBCSSSSCCBCCCEEEEEEGG
T ss_pred CCCCEEEEEEecCCCC-CcceeCccccCCCCCccccEEEEccCCHHHh-cCCEEEEEEEECCCCcCCCCceEEEEEEEcc
Confidence 3577998887643321 123356555545578999999999 444444 45789999999876544 678999999986
Q ss_pred c
Q 005800 129 N 129 (676)
Q Consensus 129 d 129 (676)
+
T Consensus 119 ~ 119 (141)
T 1v27_A 119 T 119 (141)
T ss_dssp G
T ss_pred c
Confidence 5
No 36
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=94.96 E-value=0.18 Score=46.06 Aligned_cols=69 Identities=16% Similarity=0.229 Sum_probs=50.5
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCC-----------CCceeE
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCG-----------KDERLV 120 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~-----------~~~~~v 120 (676)
.++-||.+.+ +++ ..+|..+.-+.++.|||.+.|++.- .+..|.|+|||.... +....+
T Consensus 37 ~~dpyv~v~~--~~~----~~kT~~~~~t~nP~Wne~f~f~v~~----~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~l 106 (148)
T 3kwu_A 37 SSDPYVTVQV--GKT----KKRTKTIYGNLNPVWEENFHFECHN----SSDRIKVRVLDEDDDIKSRVKQRFKRESDDFL 106 (148)
T ss_dssp CCCEEEEEEE--TTE----EEECCCCCSCSSCEEEEEEEEEECS----TTCEEEEEEEECCCSHHHHHHTTTSSCSSEEE
T ss_pred CcCeEEEEEE--CCE----EEECCccCCCCCCCcccEEEEEecC----CCCEEEEEEEECCCCccccccccccCCCCccE
Confidence 3677888877 442 3356655545578999999998753 247899999998753 456799
Q ss_pred eEEEEEeecc
Q 005800 121 GGTTILLFNS 130 (676)
Q Consensus 121 G~~~~~LFd~ 130 (676)
|.+.++|=+-
T Consensus 107 G~~~i~l~~l 116 (148)
T 3kwu_A 107 GQTIIEVRTL 116 (148)
T ss_dssp EEEEEEGGGC
T ss_pred EEEEEEHHHC
Confidence 9999998664
No 37
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=94.78 E-value=0.071 Score=50.45 Aligned_cols=68 Identities=15% Similarity=0.158 Sum_probs=49.2
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.+|-||.+.| ++... .+|..+.-+.++.|||..+|++. ....|.|+|||-..-++...+|.++++|=+
T Consensus 59 ~sDPYv~v~l--~~~~~---~kT~v~~ktlnP~WNE~F~f~v~-----~~~~L~~~V~D~d~~~~dd~iG~~~i~l~~ 126 (157)
T 2fk9_A 59 LLDPYLTVSV--DQVRV---GQTSTKQKTNKPTYNEEFCANVT-----DGGHLELAVFHETPLGYDHFVANCTLQFQE 126 (157)
T ss_dssp CCCEEEEEEE--TTEEE---EECCCCSSCSSCEEEEEEEEEEE-----EECEEEEEEEECCSSSSCEEEEEEEEEHHH
T ss_pred CCCeEEEEEE--CCEee---EEeeecCCCCCCccCcEEEEEcC-----CCCEEEEEEEECCCCCCCCEEEEEEEEHHH
Confidence 4678998877 55433 24554444456899999999864 356899999996654556799999999844
No 38
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=94.75 E-value=0.17 Score=58.01 Aligned_cols=85 Identities=16% Similarity=0.140 Sum_probs=59.7
Q ss_pred CCCceEEEEEEEeCCcccccceecccccCC-CCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 51 RRPELYVECALYIDGAPFGLPMRTRLESMG-PMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 51 ~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~-~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
..++-||++.|...... +...+|+.+.-. .++.|||.++|++...+ .+.|.|+|||....++...+|.++++|=
T Consensus 518 ~~~DPYV~V~l~g~~~d-~~~~kTkvi~~ng~NP~WnE~f~F~v~~~e---l~~L~~~V~D~D~~~~dd~iG~~~ipl~- 592 (624)
T 1djx_A 518 SIVDPKVIVEIHGVGRD-TGSRQTAVITNNGFNPRWDMEFEFEVTVPD---LALVRFMVEDYDSSSKNDFIGQSTIPWN- 592 (624)
T ss_dssp SCCCEEEEEEEESSGGG-CEEEECCCCTTCSSSCEEEEEEEEEESCGG---GCEEEEEEEECCSSSCCEEEEEEEEEGG-
T ss_pred CCCCcEEEEEEecCCCC-cceeecccccCCCCCCccCceEEEEEecCC---CCEEEEEEEEcCCCCCCceeEEEEEEHH-
Confidence 34678999998742111 112356555433 46889999999987544 4899999999876555679999999984
Q ss_pred ccccccccceeeEe
Q 005800 130 SKMQLKTGKQKLRL 143 (676)
Q Consensus 130 ~~~~Lr~G~~~l~l 143 (676)
.|++|...+.+
T Consensus 593 ---~L~~G~r~v~L 603 (624)
T 1djx_A 593 ---SLKQGYRHVHL 603 (624)
T ss_dssp ---GBCCEEEEEEE
T ss_pred ---HcCCCcEEEeC
Confidence 47778765544
No 39
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=94.70 E-value=0.072 Score=50.94 Aligned_cols=66 Identities=26% Similarity=0.475 Sum_probs=49.8
Q ss_pred CceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 53 PELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 53 ~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
+|-||.+.+ ++ ...+|+.+.-+.++.|||.+.|++. ..+.|.|+|||...-+....+|.+.++|=+
T Consensus 57 sDPYv~v~~--~~----~~~kT~v~~~tlnP~Wne~f~f~v~-----~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~ 122 (173)
T 2nq3_A 57 PSPYVEVTV--DG----QSKKTEKCNNTNSPKWKQPLTVIVT-----PVSKLHFRVWSHQTLKSDVLLGTAALDIYE 122 (173)
T ss_dssp CCEEEEEEE--TT----EEEECCCCSSCSSCEEEEEEEEEEC-----TTCEEEEEEEECCSSSCCEEEEEEEEEHHH
T ss_pred CCeEEEEEE--CC----EEeEccccCCCCCCeECCEEEEEeC-----CCCEEEEEEEECCCCCCCceEEEEEEEHHH
Confidence 577888876 44 2345665554556899999999873 388999999998765566799999999854
No 40
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=94.57 E-value=0.2 Score=50.80 Aligned_cols=75 Identities=19% Similarity=0.294 Sum_probs=54.6
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.++-||.+.+-.+++. ..+|..+.-+.++.|||.+.|++...++. ...|.|+|||...-.....+|.+.++|=+-
T Consensus 39 ~~dpyv~v~~~~~~~~---~~~T~~~~~~~nP~wne~f~f~v~~~~~~-~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l 113 (284)
T 2r83_A 39 TSDPYVKVFLLPDKKK---KFETKVHRKTLNPVFNEQFTFKVPYSELA-GKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 113 (284)
T ss_dssp SCCEEEEEEEETCTTS---CEECCCCCSCSSCEEEEEEEECCCGGGCT-TCEEEEEEEECCSSSCCCEEEEEEEEGGGC
T ss_pred CCCeEEEEEEEcCCCc---eEeCCcccCCCCCeeCceEEEEechHHhC-cCEEEEEEEECCCCCCCceeEEEEEcchhc
Confidence 4677999988644322 33455444345688999999998777663 568999999987655567899999998653
No 41
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=94.51 E-value=0.04 Score=56.80 Aligned_cols=76 Identities=16% Similarity=0.232 Sum_probs=57.9
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.++-||.+.+..+|+.. ...+|..+.-..++.|||.+.|++...+| .+..|.|+|||...-+....||.+.+++-+
T Consensus 172 ~~Dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l-~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~ 247 (296)
T 1dqv_A 172 FSDPYVKASLISEGRRL-KKRKTSIKKNTLNPTYNEALVFDVAPESV-ENVGLSIAVVDYDCIGHNEVIGVCRVGPEA 247 (296)
T ss_dssp CCCEEEEECCCTTCCTT-SCEECCCCCSCSSCEEEECCCCCCCSGGG-GSCCCCCEEEECCSSSCCEEEEECCCSSCT
T ss_pred CCCcEEEEEEEeCCcCc-cceecceecCCCCCeECceEEEEcCHHHc-cCcEEEEEEEeCCCCCCCceEEEEEECCcc
Confidence 35889999988666543 23356655545568999999999887766 456899999998766667799999998864
No 42
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=94.45 E-value=0.089 Score=46.61 Aligned_cols=78 Identities=23% Similarity=0.293 Sum_probs=53.6
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeeccc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNSK 131 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~~ 131 (676)
.++-||.+.+-.+++ ...+|+.+.-+.++.|||.+.|++.. +..+.|.|+|||.... ....+|.+.++|=+
T Consensus 26 ~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~---~~~~~l~i~V~d~d~~-~~~~iG~~~i~l~~-- 96 (126)
T 1rlw_A 26 TPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDP---NQENVLEITLMDANYV-MDETLGTATFTVSS-- 96 (126)
T ss_dssp CCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECT---TSCCEEEEEEEECCSS-CCEEEEEEEEEGGG--
T ss_pred CCCCEEEEEEccCCC---ceEEccccCCCCCCcccceEEEEecC---CCCCEEEEEEEECCCC-CCceeEEEEEEHHH--
Confidence 367788887643221 33456555545578999999999744 3478999999997654 35689999999843
Q ss_pred cccccccee
Q 005800 132 MQLKTGKQK 140 (676)
Q Consensus 132 ~~Lr~G~~~ 140 (676)
|..|...
T Consensus 97 --l~~~~~~ 103 (126)
T 1rlw_A 97 --MKVGEKK 103 (126)
T ss_dssp --SCTTCEE
T ss_pred --ccCCCcE
Confidence 4455433
No 43
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=94.41 E-value=0.072 Score=47.97 Aligned_cols=67 Identities=22% Similarity=0.420 Sum_probs=48.3
Q ss_pred CceEEEEEEEeCCcccccceeccccc-CCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 53 PELYVECALYIDGAPFGLPMRTRLES-MGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 53 ~~l~V~~~l~~~~~~l~~p~~T~~~~-~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
++-||.+.+ +++ ..+|+.+. -..++.|||.+.|++. + ....|.|+|||...-.+...+|.+.++|-+
T Consensus 31 ~dpyv~v~~--~~~----~~kT~~~~~~~~nP~Wne~f~f~v~--~--~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~ 98 (136)
T 1wfj_A 31 MDPYVQLTC--RTQ----DQKSNVAEGMGTTPEWNETFIFTVS--E--GTTELKAKIFDKDVGTEDDAVGEATIPLEP 98 (136)
T ss_dssp SCCCEEEES--SSC----EEECCCCTTCCSSCEEEEEEEEEEE--S--SCCEEEEEECCSSSCTTTCCSEEEEEESHH
T ss_pred cCceEEEEE--CCc----cceeEeccCCCCCCccCcEEEEEEC--C--CCCEEEEEEEECCCCCCCceEEEEEEEHHH
Confidence 455777655 332 23555544 3456899999999976 2 678999999998765556789999999865
No 44
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=94.18 E-value=0.15 Score=46.27 Aligned_cols=66 Identities=17% Similarity=0.241 Sum_probs=46.0
Q ss_pred CCceEEEEEEEeCCcccccceeccc-ccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRL-ESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~-~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.+|-||.++ +. ...|+. +.-+.++.|||.+.|++. +.+..|.|+|||.. ......+|.+.++|=+-
T Consensus 22 ~~DPYv~v~---~~-----~~kt~~~~~~t~nP~WnE~f~f~v~----~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l 88 (131)
T 2cjt_A 22 KFNTYVTLK---VQ-----NVKSTTIAVRGSQPSWEQDFMFEIN----RLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTI 88 (131)
T ss_dssp GCEEEEEEE---ET-----TEEEECCCEESSSCEEEEEEEEEEC----CCSSEEEEEEEECC-SSCEEEEEEEEEEGGGS
T ss_pred CcCeEEEEE---ec-----CEEEeEecCCCCCceECCEEEEEEe----CCCCeEEEEEEECC-CCCCCeEEEEEEEHHHh
Confidence 357799888 11 122222 112346889999999986 24567999999987 55667999999999653
No 45
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=93.82 E-value=0.29 Score=43.74 Aligned_cols=84 Identities=18% Similarity=0.196 Sum_probs=54.2
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCC---ceeEeEEEEEee
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKD---ERLVGGTTILLF 128 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~---~~~vG~~~~~LF 128 (676)
.++-||.+.+-.++ ...+|..+.-+.++.|||.+.|++.-. ..|.|+|||.....+ ...+|.+.+++-
T Consensus 25 ~sDpyv~v~~~~~~----~~~kT~v~~~t~nP~wne~f~f~v~~~-----~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~ 95 (132)
T 3pyc_A 25 LPDPFAKIVVDGSG----QCHSTDTVKNTLDPKWNQHYDLYVGKT-----DSITISVWNHKKIHKKQGAGFLGCVRLLSN 95 (132)
T ss_dssp CCCEEEEEEETTTC----CEEECCCCSSCSSCEEEEEEEEEEETT-----CCEEEEEEEGGGTTSSTTTTEEEEEEECHH
T ss_pred CcCeEEEEEECCCC----ceEECCccCCCCCCCccCEEEEEeCCC-----CEEEEEEEECCCCCCCCCCCceEEEEEeHH
Confidence 36779888773222 234566655555789999999987432 349999999865432 468999999865
Q ss_pred cccccccccceeeEee
Q 005800 129 NSKMQLKTGKQKLRLW 144 (676)
Q Consensus 129 d~~~~Lr~G~~~l~lw 144 (676)
+-...-..|.+.+.+-
T Consensus 96 ~l~~~~~~~~~~~~L~ 111 (132)
T 3pyc_A 96 AISRLKDTGYQRLDLC 111 (132)
T ss_dssp HHHHHTTSCCEEEECB
T ss_pred HhhcccccCcEEEeee
Confidence 4322223455555443
No 46
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=93.51 E-value=0.35 Score=49.65 Aligned_cols=74 Identities=20% Similarity=0.279 Sum_probs=54.0
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEE-eec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTIL-LFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~-LFd 129 (676)
.++-||.+.+..+++ ...+|..+.-..++.|||.+.|++...+|.. ..|.|+|||...-.+...+|.+.++ +++
T Consensus 40 ~~dPyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~-~~L~~~V~d~d~~~~~~~iG~~~i~~l~~ 114 (296)
T 1dqv_A 40 FSDPYVKIYLLPDRK---KKFQTKVHRKTLNPIFNETFQFSVPLAELAQ-RKLHFSVYDFDRFSRHDLIGQVVLDNLLE 114 (296)
T ss_dssp CCCEEEEEECTTSTT---SCEECCCCCSCSSCEEEEEEEEECCGGGGSS-CCCEEEEEECCSSSCCCEEEEEECCCTTG
T ss_pred CcCeEEEEEEEcCCC---eeEeCCccCCCCCCcEeeEEEEEecHHHhcC-CEEEEEEEEcCCCCCCceEEEEEeccccc
Confidence 367799887764443 2335665544456899999999988777753 6899999998765566789999985 443
No 47
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=93.36 E-value=0.16 Score=48.29 Aligned_cols=66 Identities=17% Similarity=0.216 Sum_probs=46.3
Q ss_pred CCceEEEEEEEeCCcccccceecccc-cCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeecc
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLE-SMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~-~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (676)
.+|-||.++ +. ...|+.+ .-..++.|||.+.|++. ..+..|.|+|||.. ......||.+.++|=+-
T Consensus 31 ~~DPYV~v~---~~-----~~kt~~~~~~t~nP~WnE~f~f~v~----~~~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l 97 (167)
T 2cjs_A 31 KFNTYVTLK---VQ-----NVESTTIAVRGSQPSWEQDFMFEIN----RLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTI 97 (167)
T ss_dssp GCEEEEEEE---ET-----TEEEECCCEESSSCEEEEEEEEECC----CTTSEEEEEEEECC-SSCCEEEEEEEEEGGGS
T ss_pred CCCeEEEEE---ec-----ceEEEEecCCCCCCCCCCEEEEEee----CCCCEEEEEEEECC-CCCCceEEEEEEEHHHh
Confidence 357799888 11 1223222 12346889999999987 24567999999987 45567999999999763
No 48
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=91.03 E-value=0.98 Score=42.41 Aligned_cols=106 Identities=8% Similarity=0.141 Sum_probs=76.3
Q ss_pred CeEEEEEeecCCCCCCCCCCCCCCCCCCCCCccCCCCceEEEEEEEe-CCcccccceecccccC--CCCcccccceEecc
Q 005800 17 PVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYI-DGAPFGLPMRTRLESM--GPMYCWNEPITLST 93 (676)
Q Consensus 17 ~~~~ki~~leg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~-~~~~l~~p~~T~~~~~--~~~~~Wnewl~fpi 93 (676)
.+.|+|.++ |-+. +. ...+-++++.|.+ .|+.++.+-.|+-.+- .+...||..+.+..
T Consensus 15 ~l~v~Ie~i-glkd----a~--------------~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqt 75 (152)
T 2qzq_A 15 LLTLTIEKI-GLKD----AG--------------QCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQR 75 (152)
T ss_dssp EEEEEEEEE-ECTT----GG--------------GCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSS
T ss_pred EEEEEEEEE-EeCC----HH--------------HccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeC
Confidence 478888888 6422 21 2245699999996 7778887766765422 23466899999999
Q ss_pred cccCcCccCceEEEEEeecCCCCce-eEeEEEEEeecccccccccceeeEeec
Q 005800 94 KYRDLTAHSQLALTVWDVSCGKDER-LVGGTTILLFNSKMQLKTGKQKLRLWP 145 (676)
Q Consensus 94 ~~~dLP~~a~L~~ti~~~~~~~~~~-~vG~~~~~LFd~~~~Lr~G~~~l~lw~ 145 (676)
.+.+||.+|.+.|.+-.....++.+ ..+|+-+. .| .++.|...+.+..
T Consensus 76 ple~lp~G~aivfElkH~k~kkkk~S~kCw~f~~-~d---~i~~g~~~lElY~ 124 (152)
T 2qzq_A 76 HLEKLPKGAAIFFEFKHYKPKKRFTSTKCFAFME-MD---EIKPGPIVIELYK 124 (152)
T ss_dssp CGGGSCTTCEEEEEEEEEETTTTEEEEEEEEEEE-GG---GCCSEEEEECCEE
T ss_pred cHHHCCCCcEEEEEEEEecccceeeeeeeEEEEE-hh---hcccCceeeehhc
Confidence 9999999999999998876654443 56676555 33 7788998888763
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=90.97 E-value=0.95 Score=53.48 Aligned_cols=81 Identities=17% Similarity=0.231 Sum_probs=55.9
Q ss_pred CceEEEEEEEeCCccc-ccceecccccC-CCCcccccc-eEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEEee
Q 005800 53 PELYVECALYIDGAPF-GLPMRTRLESM-GPMYCWNEP-ITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLF 128 (676)
Q Consensus 53 ~~l~V~~~l~~~~~~l-~~p~~T~~~~~-~~~~~Wnew-l~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LF 128 (676)
++-||++.|+.....- ....+|+.+.- +-++.|||. ++|+ |.+.+ -|.|.|+|||.. ...+|+++++|
T Consensus 667 ~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe---la~Lrf~V~D~d----ddfiG~~~ipL- 738 (816)
T 3qr0_A 667 ISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPD---LAVVRIIVSEEN----GKFIGHRVMPL- 738 (816)
T ss_dssp CCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGG---GCEEEEEEEETT----SCEEEEEEEES-
T ss_pred CCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCC---ccEEEEEEEecC----CCeeeEEEEEH-
Confidence 5779999998321110 01224554432 235789997 9999 76544 479999999953 45899999998
Q ss_pred cccccccccceeeEee
Q 005800 129 NSKMQLKTGKQKLRLW 144 (676)
Q Consensus 129 d~~~~Lr~G~~~l~lw 144 (676)
..|++|...+.+.
T Consensus 739 ---~~L~~GyR~vpL~ 751 (816)
T 3qr0_A 739 ---DGIKPGYRHVPLR 751 (816)
T ss_dssp ---TTCCCEEEEEEEE
T ss_pred ---HHcCCcceEEEEe
Confidence 5689998877664
No 50
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=90.78 E-value=1.2 Score=53.05 Aligned_cols=81 Identities=17% Similarity=0.292 Sum_probs=54.7
Q ss_pred CceEEEEEEEeCCcccccceecccccC-CCCccccc-ceEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 53 PELYVECALYIDGAPFGLPMRTRLESM-GPMYCWNE-PITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 53 ~~l~V~~~l~~~~~~l~~p~~T~~~~~-~~~~~Wne-wl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
++-||++.|+.....-....+|..+.- +.++.||| .++|+ |.+ |-.|.|.|+|||.. ...+|.++++|
T Consensus 742 ~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~---pela~Lrf~V~D~d----ddfiG~~~lpL-- 812 (885)
T 3ohm_B 742 VGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVL---PTLASLRIAAFEEG----GKFVGHRILPV-- 812 (885)
T ss_dssp CCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESC---GGGCEEEEEEEETT----TEEEEEEEEET--
T ss_pred CCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEc---CCcCEEEEEEEcCC----ccEEeeEEEEH--
Confidence 577999999731110001134554432 23578999 79999 754 55578999999953 45899999987
Q ss_pred ccccccccceeeEee
Q 005800 130 SKMQLKTGKQKLRLW 144 (676)
Q Consensus 130 ~~~~Lr~G~~~l~lw 144 (676)
..|++|...+.|.
T Consensus 813 --~~L~~GyR~vpL~ 825 (885)
T 3ohm_B 813 --SAIRSGYHYVCLR 825 (885)
T ss_dssp --TTCCCEEEEEEEE
T ss_pred --HHcCCCceEEEec
Confidence 4588898777664
No 51
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=90.44 E-value=1.2 Score=52.44 Aligned_cols=81 Identities=22% Similarity=0.289 Sum_probs=55.0
Q ss_pred CceEEEEEEEeCCcccccceecc-cccC-CCCccccc-ceEe-cccccCcCccCceEEEEEeecCCCCceeEeEEEEEee
Q 005800 53 PELYVECALYIDGAPFGLPMRTR-LESM-GPMYCWNE-PITL-STKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLF 128 (676)
Q Consensus 53 ~~l~V~~~l~~~~~~l~~p~~T~-~~~~-~~~~~Wne-wl~f-pi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LF 128 (676)
++-||++.|+.....-....+|. .+.- +-++.||| .++| +|... .-|.|.|+|||.. ...+|++.++|
T Consensus 695 ~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~---el~~Lr~~V~D~d----~d~iG~~~ipl- 766 (799)
T 2zkm_X 695 VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMP---ELASLRVAVMEEG----NKFLGHRIIPI- 766 (799)
T ss_dssp CCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSG---GGCEEEEEEEETT----TEEEEEEEEEG-
T ss_pred CCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccC---CccEEEEEEEEeC----CCccceEeeeh-
Confidence 57799999983110000123555 3332 23578999 7999 78654 4568999999963 46899999998
Q ss_pred cccccccccceeeEee
Q 005800 129 NSKMQLKTGKQKLRLW 144 (676)
Q Consensus 129 d~~~~Lr~G~~~l~lw 144 (676)
..|++|...+.+-
T Consensus 767 ---~~L~~G~r~v~L~ 779 (799)
T 2zkm_X 767 ---NALNSGYHHLCLH 779 (799)
T ss_dssp ---GGBCCEEEEEEEE
T ss_pred ---hhcCCCcEEEecc
Confidence 5688898776664
No 52
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=89.73 E-value=2 Score=48.38 Aligned_cols=84 Identities=20% Similarity=0.375 Sum_probs=58.2
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec--
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN-- 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd-- 129 (676)
.+|-||.+.+ +++ ..+|..+.-..++.|||.+.|++. +++....|.|.|||.....+.-.+|.+.++|-.
T Consensus 413 ~sDPYV~v~l--~~~----~~kTkvik~tlNP~Wne~f~f~~~--~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~~g~ 484 (540)
T 3nsj_A 413 ATDAYLKVFF--GGQ----EFRTGVVWNNNNPRWTDKMDFENV--LLSTGGPLRVQVWDADYGWDDDLLGSCDRSPHSGF 484 (540)
T ss_dssp CCCEEEEEEE--TTE----EEECCCBCSCSSCBCCCCEEEEEE--ETTTCCCEEEEEEECCSSSCCEEEEEEEECCCSEE
T ss_pred CcCeEEEEEE--CCE----eeeeeeecCCCCCCCCeEEEEEEe--cCCCCCEEEEEEEECCCCCCCCEEEEEEEEeeCCc
Confidence 3677888766 443 256665554456899999998743 445788999999998766566789999988752
Q ss_pred --ccccccccceeeEe
Q 005800 130 --SKMQLKTGKQKLRL 143 (676)
Q Consensus 130 --~~~~Lr~G~~~l~l 143 (676)
....|..|...+.+
T Consensus 485 ~~~~~~l~~G~l~~~~ 500 (540)
T 3nsj_A 485 HEVTCELNHGRVKFSY 500 (540)
T ss_dssp EEEEEECSSSEEEEEE
T ss_pred EEEEEEcCCeEEEEEE
Confidence 12346666655543
No 53
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=89.52 E-value=1.5 Score=48.22 Aligned_cols=69 Identities=20% Similarity=0.192 Sum_probs=50.1
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.+|-||.+.+ +++ ...|..+.-+.++.|||.+.|++. -+....|.|+|||....++...+|.++++|=+
T Consensus 407 ~sdpyv~v~~--~~~----~~~T~~~~~t~nP~w~e~f~f~~~---~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~ 475 (510)
T 3jzy_A 407 KSNPYCEISM--GSQ----SYTTRTIQDTLNPKWNFNCQFFIK---DLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAK 475 (510)
T ss_dssp CCCEEEEEEE--TTE----EEECCCCSSCSSCEEEEEEEEEES---CTTTCEEEEEEEECCSSSSCCEEEEEEEEHHH
T ss_pred CCCeEEEEEE--CCe----eccCCccCCCCCCccCceEEEEec---CCCCCEEEEEEEeCCCCCCCCceEEEEEEHHH
Confidence 3677888876 442 235555554456899999999874 33457899999998765566799999999854
No 54
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=89.13 E-value=1.8 Score=40.32 Aligned_cols=57 Identities=12% Similarity=0.221 Sum_probs=45.7
Q ss_pred eeccccc-CCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 72 MRTRLES-MGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 72 ~~T~~~~-~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.+|+..- -...+.|||-++||+.. .|-.+..|++.||++..-.....||.+.++|-+
T Consensus 50 ~kTkvi~~~~~npvfnE~F~wpl~~-~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~ 107 (144)
T 3l9b_A 50 FYSRVLENCEDVADFDETFRWPVAS-SIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQK 107 (144)
T ss_dssp EECCCEEEECSCEEEEEEEEEEESS-CCCTTCEEEEEEEEECTTSCCEEEEEEEEESHH
T ss_pred eeeEEeccCCCCceEcceEEecCCC-CCCCCCEEEEEEEECccccCCCEEEEEEEEhHH
Confidence 3454432 24557899999999997 888889999999999876667789999999975
No 55
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=75.23 E-value=5.5 Score=45.69 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=54.2
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.+|-||.+.+..+++.. ...+|+.+.-+.++.|||...|++.-.+. +..|.|+|||.........+|.+.++|-.
T Consensus 192 ~sDPyvkv~l~p~~~~~-~k~kT~v~~~tlnP~wne~f~f~~~~~~~--~~~L~v~v~d~d~~~~dd~iG~~~i~l~~ 266 (674)
T 3pfq_A 192 LSDPYVKLKLIPDPKSE-SKQKTKTIKSSLNPEWNETFRFQLKESDK--DRRLSVEIWDWDLTSRNDFMGSLSFGISE 266 (674)
T ss_dssp SCCEEEEEEEESCSSCC-SCEECCCCSSCSSCEEEEEEEEECCSTTT--TCEEEEEEEECCSSSCCEECCBCCCBTTH
T ss_pred ccCcccccccccCcccc-ccccccccccccCCCccceeeeecccCCc--cceeeeEEeecccccccccccccccchhh
Confidence 46779999987555432 23355555545568899999999876664 44699999998776666789999888743
No 56
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=72.99 E-value=3.4 Score=48.32 Aligned_cols=71 Identities=21% Similarity=0.242 Sum_probs=51.2
Q ss_pred CCceEEEEEEEeCCcccccceecccccCCCCcccccceEecccccCcCccCceEEEEEeecCCCCceeEeEEEEEeec
Q 005800 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (676)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (676)
.+|-||.+.+-.... ...+|+.+.-+.++.|||.+.|++.- +..+.|.|+|||...-. ...+|.+.++|-+
T Consensus 41 ~sDPYV~V~l~~~~~---~k~kTkvik~tlNPvWNEtF~F~v~~---~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~ 111 (749)
T 1cjy_A 41 TPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDP---NQENVLEITLMDANYVM-DETLGTATFTVSS 111 (749)
T ss_dssp CCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECT---TSCCBCEEEEEECCSSS-CEEEEEECCBSTT
T ss_pred CcCeEEEEEEecCCC---CeEecceEcCCCCCeeeeEEEEEecC---CCCCEEEEEEEECCCCC-CceeEEEEEEHHH
Confidence 367788887642211 23456655544568999999999764 35678999999987655 6789999999865
No 57
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=53.43 E-value=3.3 Score=45.78 Aligned_cols=67 Identities=22% Similarity=0.319 Sum_probs=5.8
Q ss_pred ceEEEEEEEeCCcccccceecccccCC---CCcccccceEecccccCcCccCceEEEEEee-c---CCCCceeEeEEEEE
Q 005800 54 ELYVECALYIDGAPFGLPMRTRLESMG---PMYCWNEPITLSTKYRDLTAHSQLALTVWDV-S---CGKDERLVGGTTIL 126 (676)
Q Consensus 54 ~l~V~~~l~~~~~~l~~p~~T~~~~~~---~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~-~---~~~~~~~vG~~~~~ 126 (676)
+-||.+.+ +++.. .+|+.+.-+ .++.|||..+|++ +|..+.|.|+|||- . ...+...+|.+.++
T Consensus 28 dpYv~v~l--~~~~~---~kT~v~~kt~~glnP~WnE~F~f~~----~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~ 98 (483)
T 3bxj_A 28 RYYCELCL--DDMLY---ARTTSKPRSASGDTVFWGEHFEFNN----LPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVP 98 (483)
T ss_dssp ------------------------------------CCEECC--------------------------------------
T ss_pred CCeEEEEE--CCeEE---eeeeEEeCCCCCCCCccccEEEEec----CCCccEEEEEEEecCCccccCCCCceEEEEEEE
Confidence 34665544 34322 244444333 4688999999986 25568999999994 2 12344689999999
Q ss_pred eec
Q 005800 127 LFN 129 (676)
Q Consensus 127 LFd 129 (676)
+=+
T Consensus 99 l~~ 101 (483)
T 3bxj_A 99 VAT 101 (483)
T ss_dssp ---
T ss_pred HHH
Confidence 854
No 58
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=50.58 E-value=28 Score=32.24 Aligned_cols=74 Identities=22% Similarity=0.221 Sum_probs=35.8
Q ss_pred chhhHhhhhccccCCCHHHHHHHHHHhcccCCC-CHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHh
Q 005800 322 EKRALTKFLRSVEWSDVQEAKQALELMGRWEMI-DVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 400 (676)
Q Consensus 322 ~~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i-~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLk 400 (676)
.+++++.++...+-.++.-...|...|...... ....-+++|.. +|+.||..|+..|..+.+.+ .++.|++.|+
T Consensus 74 ~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d--~~~~vr~~a~~aL~~~~~~~---~~~~L~~~l~ 148 (201)
T 3ltj_A 74 DERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKD--EDWFVRIAAAFALGEIGDER---AVEPLIKALK 148 (201)
T ss_dssp CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTC--SSHHHHHHHHHHHHHHTCGG---GHHHHHHHTT
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHcC--CCHHHHHHHHHHHHHhCCHH---HHHHHHHHHc
Confidence 345566655555444444334444444443322 12222333322 35667777777776665544 3344455554
No 59
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=45.87 E-value=22 Score=33.22 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=30.9
Q ss_pred chhhHhhhhccccCCCHHHHHHHHHHhcccCC-CCHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHh
Q 005800 322 EKRALTKFLRSVEWSDVQEAKQALELMGRWEM-IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 400 (676)
Q Consensus 322 ~~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~-i~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLk 400 (676)
+|++++.++....=.++.....|...|..... -....-+++|.. .|+.||..|+..|..+.+.+ .++.|+++|+
T Consensus 17 ~~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~~~~~~~L~~~l~~--~~~~vr~~a~~aL~~~~~~~---~~~~L~~~l~ 91 (211)
T 3ltm_A 17 DPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKD--EDAWVRRAAADALGQIGDER---AVEPLIKALK 91 (211)
T ss_dssp CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTC--SCHHHHHHHHHHHHHHCCGG---GHHHHHHHTT
T ss_pred CHhHHHHHHHHHcCCCHHHHHHHHHHHHHhCCccHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCHH---HHHHHHHHHc
Confidence 45555555544432233333334444433322 112222333332 24555555555555544432 2344444443
No 60
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=38.25 E-value=56 Score=30.37 Aligned_cols=74 Identities=22% Similarity=0.208 Sum_probs=35.1
Q ss_pred chhhHhhhhccccCCCHHHHHHHHHHhcccCCC-CHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHh
Q 005800 322 EKRALTKFLRSVEWSDVQEAKQALELMGRWEMI-DVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 400 (676)
Q Consensus 322 ~~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i-~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLk 400 (676)
.+.+++.++..++=.++.-...|...|..-... ....-+++|. -+++.||..|+..|..+.+.+. ++.|++.|+
T Consensus 79 ~~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~--d~~~~vr~~a~~aL~~~~~~~~---~~~L~~~l~ 153 (211)
T 3ltm_A 79 DERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALK--DEDWFVRIAAAFALGEIGDERA---VEPLIKALK 153 (211)
T ss_dssp CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTT--CSSHHHHHHHHHHHHHHCCGGG---HHHHHHHTT
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHh--CCCHHHHHHHHHHHHHcCCHHH---HHHHHHHHc
Confidence 345555555555444443333344444333221 1122223332 2456777777777766665543 344455553
No 61
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=33.76 E-value=44 Score=30.81 Aligned_cols=75 Identities=23% Similarity=0.267 Sum_probs=46.2
Q ss_pred hhhHhhhhccccCCCHHHHHHHHHHhcccCCC-CHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhc
Q 005800 323 KRALTKFLRSVEWSDVQEAKQALELMGRWEMI-DVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRF 401 (676)
Q Consensus 323 ~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i-~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLky 401 (676)
+.+++.+++.+.=.++.....|...|...... ....-+++|.. +++.||..|+..|..+.+.+ .++.|+++|+-
T Consensus 44 ~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~~~~~~~L~~~l~d--~~~~vr~~a~~aL~~~~~~~---~~~~L~~~l~d 118 (201)
T 3ltj_A 44 ERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKD--EDGWVRQSAAVALGQIGDER---AVEPLIKALKD 118 (201)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTC--SSHHHHHHHHHHHHHHCCGG---GHHHHHHHTTC
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcC--CCHHHHHHHHHHHHHhCcHH---HHHHHHHHHcC
Confidence 45666666666434444444555555544332 23333444543 57899999999998887765 45667777764
Q ss_pred c
Q 005800 402 E 402 (676)
Q Consensus 402 E 402 (676)
+
T Consensus 119 ~ 119 (201)
T 3ltj_A 119 E 119 (201)
T ss_dssp S
T ss_pred C
Confidence 3
No 62
>2do9_A NALP10, nacht-, LRR- and PYD-containing protein 10; apoptosis, inflammation, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=26.75 E-value=26 Score=31.13 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=56.9
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHhHHHhhhchhhHhhhhccccCCCHHHHHHHHHHhcccCCCCHhhHhhccCCCCC
Q 005800 289 RKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFE 368 (676)
Q Consensus 289 ~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~ 368 (676)
+..|...++ .|+++| +++|+.+|.+.+ ...|.|...+ ..++.|--.||...|.
T Consensus 17 ~~~Ll~~Le-----~L~~eE---lkkFK~~L~~~~------~~~Ip~~~le-------------~Ad~~dLa~lLv~~y~ 69 (115)
T 2do9_A 17 QEALLWALN-----DLEENS---FKTLKFHLRDVT------QFHLARGELE-------------SLSQVDLASKLISMYG 69 (115)
T ss_dssp HHHHHHHHH-----HSCHHH---HHHHHHHHHHHH------CSSCCSSSTT-------------TCCTTHHHHHHHHHTC
T ss_pred HHHHHHHHH-----HcCHHH---HHHHHHHHccCc------CCCCChhhcc-------------cCCHHHHHHHHHHHcC
Confidence 445554443 566666 899999998755 5788898533 3488888889999998
Q ss_pred CHHHHHHHHHHHhcCChhHHHHH
Q 005800 369 SEEVRAYAVCILERADDDELQCY 391 (676)
Q Consensus 369 d~~VR~yAV~~L~~~~d~eL~~y 391 (676)
-......|++.+++++-.+|..-
T Consensus 70 e~~A~~vt~~If~~mn~~dLae~ 92 (115)
T 2do9_A 70 AQEAVRVVSRSLLAMNLMELVDY 92 (115)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCHHHHHHH
Confidence 88888999999999887766543
No 63
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=24.99 E-value=68 Score=33.13 Aligned_cols=45 Identities=22% Similarity=0.477 Sum_probs=34.5
Q ss_pred CCCCCHHHHHHHHHhHHHhhhch-------hhHhhhhccccCCCHHHHHHHHHHhc
Q 005800 301 TRTLSGDEKQLLWKFRFSLMSEK-------RALTKFLRSVEWSDVQEAKQALELMG 349 (676)
Q Consensus 301 ~~~Lt~~ek~llW~~R~~l~~~~-------~aL~k~L~sv~W~~~~e~~~a~~LL~ 349 (676)
+..||++|+..|=++|..+..++ ..|-+||++-+|+ +..|.++|.
T Consensus 32 ~~~lt~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfd----v~kA~~mL~ 83 (320)
T 3q8g_A 32 PGNLTKEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFD----INASVEMFV 83 (320)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTC----HHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCC----HHHHHHHHH
Confidence 45799999999999999887653 5788999999998 445555554
No 64
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=23.31 E-value=3.4e+02 Score=27.04 Aligned_cols=106 Identities=19% Similarity=0.133 Sum_probs=67.9
Q ss_pred HHHHHHHH-hHHHhh-hchhh-HhhhhccccCC--CHHHHHH-HHHHhcccC-----CCCHhhHhhccCCCCCC--HHHH
Q 005800 307 DEKQLLWK-FRFSLM-SEKRA-LTKFLRSVEWS--DVQEAKQ-ALELMGRWE-----MIDVCDALELLSPVFES--EEVR 373 (676)
Q Consensus 307 ~ek~llW~-~R~~l~-~~~~a-L~k~L~sv~W~--~~~e~~~-a~~LL~~W~-----~i~~~dALeLL~~~f~d--~~VR 373 (676)
.-++.+|+ ++.+|. .+|+. ++.+. .|. +...|+. |.+-+.-|. ..+|+.++.+|.....| ..||
T Consensus 119 rVre~lA~a~~~~~~~~~pe~~l~~~~---~W~~d~n~~VRR~Ase~~rpW~~~~~~k~dp~~ll~iL~~L~~D~s~yVr 195 (240)
T 3l9t_A 119 RVQEVLAKAFDEFCKKIEYKKALPIID---EWLKSSNLHTRRAATEGLRIWTNRPYFKENPNEAIRRIADLKEDVSEYVR 195 (240)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTTHHHHH---HHHHCSSHHHHHHHHHHTCSGGGSTTTTTCHHHHHHHHHTTTTCSCHHHH
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHH---HHhcCCCHHHHHHHHHhhHHHhccchhhcCHHHHHHHHHHhcCChHHHHH
Confidence 34566666 677775 67774 44444 353 2333444 344444464 46889999999998877 5788
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHhcccCcchHHHHHHHHHhhhc
Q 005800 374 AYAVCILERADDDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHN 420 (676)
Q Consensus 374 ~yAV~~L~~~~d~eL~~yLlQLVQaLkyE~~~~s~La~FLi~Ral~n 420 (676)
+=--..|+.++. .=|.+|...--.....++.++++++.|++.
T Consensus 196 KSVan~LrD~SK-----~~Pd~V~~~~~~w~~~~~~~~~i~k~A~k~ 237 (240)
T 3l9t_A 196 KSVGNALRDISK-----KFPDLVKIELKNWKLESKEINQVYKLASKF 237 (240)
T ss_dssp HHHHHHHHHHHT-----TCHHHHHHHHHTCCCCSHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhh-----hCHHHHHHHHHHhhccCHhHHHHHHHHHhh
Confidence 766677764332 235566665544445589999999999875
No 65
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=23.20 E-value=33 Score=29.86 Aligned_cols=49 Identities=24% Similarity=0.239 Sum_probs=32.6
Q ss_pred HhcccCCCCHhhHhhccCCCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHh
Q 005800 347 LMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 400 (676)
Q Consensus 347 LL~~W~~i~~~dALeLL~~~f~d~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLk 400 (676)
.|.....-....-+++|.. +|+.||..|+..|..+.+.+. ++.|+.+|+
T Consensus 35 ~L~~~~~~~~~~L~~~L~d--~~~~vR~~A~~aL~~~~~~~a---~~~L~~~L~ 83 (131)
T 1te4_A 35 ALSRMGDEAFEPLLESLSN--EDWRIRGAAAWIIGNFQDERA---VEPLIKLLE 83 (131)
T ss_dssp STTSCSSTTHHHHHHGGGC--SCHHHHHHHHHHHGGGCSHHH---HHHHHHHHH
T ss_pred HHHHhCchHHHHHHHHHcC--CCHHHHHHHHHHHHhcCCHHH---HHHHHHHHc
Confidence 3333333345555566663 679999999999988887553 566666665
No 66
>2l6a_A Nacht, LRR and PYD domains-containing protein 12; NLRP12, pyrin, death domain, signaling protein; NMR {Homo sapiens}
Probab=21.79 E-value=50 Score=28.63 Aligned_cols=69 Identities=25% Similarity=0.311 Sum_probs=52.5
Q ss_pred CCCCHHHHHHHHHhHHHhhhchhhHhhhhccccCCCHHHHHHHHHHhcccCCCCHhhHhhccCCCCCCHHHHHHHHHHHh
Q 005800 302 RTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILE 381 (676)
Q Consensus 302 ~~Lt~~ek~llW~~R~~l~~~~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~d~~VR~yAV~~L~ 381 (676)
..|+++| +++|+.+|.+ + +..=+..|.|... ...++.|--.||...|........|++.++
T Consensus 20 e~L~~~E---lkkFK~~L~~-~--l~~g~~~Ip~~~l-------------e~ad~~dLa~lLv~~y~e~~A~~vt~~if~ 80 (102)
T 2l6a_A 20 EELEAVE---LKKFKLYLGT-A--TELGEGKIPWGSM-------------EKAGPLEMAQLLITHFGPEEAWRLALSTFE 80 (102)
T ss_dssp TTSCHHH---HHHHHHHHHS-C--STTTTCSSCSSTT-------------TTCCHHHHHHHHHHHTCHHHHHHHHHHHHG
T ss_pred HHcCHHH---HHHHHHHHcc-c--ccccCCCCChHHH-------------hcCCHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 4677766 8999999985 2 2223457888843 345778888888888988888899999999
Q ss_pred cCChhHHH
Q 005800 382 RADDDELQ 389 (676)
Q Consensus 382 ~~~d~eL~ 389 (676)
+++-.+|.
T Consensus 81 ~mn~~dL~ 88 (102)
T 2l6a_A 81 RINRKDLW 88 (102)
T ss_dssp GGTCHHHH
T ss_pred HcCHHHHH
Confidence 99877764
Done!